CmaCh04G028440 (gene) Cucurbita maxima (Rimu) | Cucurbit Genomics Database (CuGenDB)

Overview


Name	CmaCh04G028440
Type	gene
Organism	Cucurbita maxima (Cucurbita maxima (Rimu))
Description	Proteasome maturation factor UMP1 family protein
Location	Cma_Chr04 : 18989360 .. 18991701 (-)

Genome Viewer

Gene Expression

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonfive_prime_UTRCDS

Hold the cursor over a type above to highlight its positions in the sequence below.

CTGTGTTTTATATAAATACCAAAACGATACCAATTCGCAGTTCGCAGAGGCACAGCTTTCCGTTCTCGACTTGCTGAATAAGTTTTCTCTCAACTTGCTCCTTGAAGAAGAAAAATGGAATCTTCGAAGACAATAGCCCATGAAATCGGAGGGATCCAGAACGATGCGCTTCGATTTGGGCTCCAAGGCGTTAAGAGCGACCTCGTCGGGTCTCATCCTGTCGAATCCCTCTACGAAAGTGTAATTTCCTTTCCTTCTCTTTCTATCGCTGTTTTATACAATGTGGAAAAGCGGACTGGAAGTTTCAATCTAAGTTGCCCTATTTGATTTCTGTGTGGATTTTGCTGTTTATTTTTTTGCAGTTAGACTAGATTGTTATTAGAAATAGAATCTAGATTCGACGGAGCTGATGAACCACCGTTTGCCCATGTTTCTCGGATTAGGAACTTGTAACTTGACGTTTTATTTCCTGTTATTATGGTCAATTCTCTCTTTCTATCCCCATATTTCAATATTTTGGGTGTCCAATCTTGCAAATGGACAGTGCGCAAGTAGGTTCTGCCCTCAATTAGATTTCTATGGAGAGGACTAAGAGCAGCCATATTCTTTGGAACTTGTAATTAGTGACCATCCAGCATTCAGGAGGGGGGATACTTAGGAAAAGCACCGAAAAGTCTCTTCTGACTTGATTATAGGGTTGGGGTGGGATGGTTGTCCCTTTTCTTTCTCTTTCTTCATTTGCTAATAGAATTCTTTATATCCAACATGAATTTCTTACGGCAGCACCTGAGGGGCATTAGTTTGCACTCAAAACATTTATGAGATAAACACCATAAATCTTTCAAACAATTTTAGACATTTAAGTTGGTTTAGTCATAATGAACGGTATCCACCAAGAAAGGTGTATCAACCACAGTTTTTTCTAATTGGTTGAGTCAATTTATTTTAATTTGATACATGTATATCCTTGTTTTCATGCTTCAGACGAGGAGAACAGAAGAGGAGATGAAAAGGAAAATTCTTGTGAATACATATGGATCTGCTTTTCCACTGAAGATGGATTTGGACAGGCAAATTCTTTCTCGGTATGGTTTTTCTCCTTGCATTGATGCTGGATCTCTGTTGGTGTGTTCTAAATTCGAGTATTAGTGAAAAGGCCAAAATCTGCTGTTTTGGTTATGCATTTTATTTTATTTTATTTTATTTTCAACTTTAATCACATTGCTAATCGTTGTTTTATAATGATTTGGTGGGGAGCAAAAAGGTCATAGTTCACTCCACTGACTCTTCTACCTCATGTGATTTGCTCTCTTCGTACACATGTTAAATTTAGTTCTCTGGAAGTGTGGTGGGAGCACCTTTCCCCCTCATCCCTTGTTATGCTAATGACATTAAAATAGGATCTCTTGTGGAATTAATGTTTGATGTGCATGAATTTAAATGGGGAGACTAAAATCTGGCATCTACTTTTCTTTTCTTTTATTTTCACCAACATTTCAACTTGTGATGCCAGTTAAGTTAATTCTAGCTGTTTGTCTAGTTGGAATTTGAAAATCATTGCTAATATAATTTATATGCTAATTCAACGCTATTGCAGATTTCAAAGGCCTCCAGGACCTATTCCATCTTCAATGCTGGGTTTGGAGGCTCTTACTGGAAGCTTGGATGACTTTGGCTTTGAAGATTATCTAAATGGTAAAATGAGAACTTATGAAGTGACCTAGATCCTAATAGCTCATCTGATTCTGTTGTTCACTATATTCTTTTGCATCATTCATGAGAGTTTTCAATTACCTTAAATAGTTCTTTTAATCTTAACAACTCTCTTTATGACTATCTGACATTGGTGGGATGATTAAATCCATGAAGTATGGTCGGGTTTAGCACAATTAGAAAAATAGTATTCAGGGACCTTCACTTGATCTTATTCCTCACTTTTAACCATCCATCTTGCGACTACTAGCACATGTCTGTTGGATGAAGTTCGCAAGAGTTTCCGCTGCTTCCAATAACCAATATCACATAGAATATTCCATCCACTAGTCTTTATGCAAGATTGCAGCCACTCATTTCCACAAGGGATGTTTGCTTTCACTTTTTTTTTTTTTTTTCACTAAACATAATGAATCTGTGTTTTCTAGTCCTATCTCGCCGTGTTTTCATTATTCTATATATACCCACTTTAGATAATAGTCTTTGCTGGTGTTTATTTACAACGTCCTATGTCATTGTCATTTGCAGACCCAAGAGAATCTGAATCTTTGAGGCCATTGGACATGCACCATGGAATGGAAGTCCGCCTTGGTCTTTCCAAAGGACCTGTTTGCCCAAGTTTCATGTAA

mRNA sequence

CTGTGTTTTATATAAATACCAAAACGATACCAATTCGCAGTTCGCAGAGGCACAGCTTTCCGTTCTCGACTTGCTGAATAAGTTTTCTCTCAACTTGCTCCTTGAAGAAGAAAAATGGAATCTTCGAAGACAATAGCCCATGAAATCGGAGGGATCCAGAACGATGCGCTTCGATTTGGGCTCCAAGGCGTTAAGAGCGACCTCGTCGGGTCTCATCCTGTCGAATCCCTCTACGAAAGTACGAGGAGAACAGAAGAGGAGATGAAAAGGAAAATTCTTGTGAATACATATGGATCTGCTTTTCCACTGAAGATGGATTTGGACAGGCAAATTCTTTCTCGATTTCAAAGGCCTCCAGGACCTATTCCATCTTCAATGCTGGGTTTGGAGGCTCTTACTGGAAGCTTGGATGACTTTGGCTTTGAAGATTATCTAAATGACCCAAGAGAATCTGAATCTTTGAGGCCATTGGACATGCACCATGGAATGGAAGTCCGCCTTGGTCTTTCCAAAGGACCTGTTTGCCCAAGTTTCATGTAA

Coding sequence (CDS)

ATGGAATCTTCGAAGACAATAGCCCATGAAATCGGAGGGATCCAGAACGATGCGCTTCGATTTGGGCTCCAAGGCGTTAAGAGCGACCTCGTCGGGTCTCATCCTGTCGAATCCCTCTACGAAAGTACGAGGAGAACAGAAGAGGAGATGAAAAGGAAAATTCTTGTGAATACATATGGATCTGCTTTTCCACTGAAGATGGATTTGGACAGGCAAATTCTTTCTCGATTTCAAAGGCCTCCAGGACCTATTCCATCTTCAATGCTGGGTTTGGAGGCTCTTACTGGAAGCTTGGATGACTTTGGCTTTGAAGATTATCTAAATGACCCAAGAGAATCTGAATCTTTGAGGCCATTGGACATGCACCATGGAATGGAAGTCCGCCTTGGTCTTTCCAAAGGACCTGTTTGCCCAAGTTTCATGTAA

Protein sequence

MESSKTIAHEIGGIQNDALRFGLQGVKSDLVGSHPVESLYESTRRTEEEMKRKILVNTYGSAFPLKMDLDRQILSRFQRPPGPIPSSMLGLEALTGSLDDFGFEDYLNDPRESESLRPLDMHHGMEVRLGLSKGPVCPSFM

Homology

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BLAST of CmaCh04G028440 vs. Swiss-Prot
Match: CCB12_ORYSJ (Cyclin-B1-2 OS=Oryza sativa subsp. japonica GN=CYCB1-2 PE=3 SV=1)

HSP 1 Score: 112.5 bits (280), Expect = 3.9e-24
Identity = 61/115 (53.04%), Postives = 74/115 (64.35%), Query Frame = 1


Query: 1   MESSKTIAHEIGGIQNDALRFGLQ-GVKSDLVGSHPVESLYESTRRTEEEMKRKILVNTY 60
           M S   +  EIGG  +D +RFG+   VK DL   HP+++      +   + KR      Y
Sbjct: 1   MASGGVVKKEIGG-NHDVVRFGVNDSVKGDLAPPHPLQASVHKEAKFWADKKRFGAEAIY 60

Query: 61  GSAFPLKMDLDRQILSRFQRPPGPIPSSMLGLEALTGSLDDFGFEDYLNDPRESE 115
           GSAF ++ DLD QILS+FQRPPG +PSSMLG EALTGSLDDFGFEDYLN    SE
Sbjct: 61  GSAFNIRKDLDAQILSKFQRPPGALPSSMLGYEALTGSLDDFGFEDYLNYAAASE 114

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BLAST of CmaCh04G028440 vs. Swiss-Prot
Match: POMP_DICDI (Proteasome maturation protein homolog OS=Dictyostelium discoideum GN=pomp PE=3 SV=1)

HSP 1 Score: 77.0 bits (188), Expect = 1.8e-13
Identity = 44/111 (39.64%), Postives = 69/111 (62.16%), Query Frame = 1


Query: 23  LQGVKSDLVG-SHPVESLYESTRRTEEEMKRKILVNTYGSAFPLKMDLDRQILSRFQRPP 82
           L+   S++ G SHPVES+     +TE ++K   + N +G+   +  ++++QI S+F+R P
Sbjct: 14  LRNESSNVKGLSHPVESIQLDQGKTEIKLKNFAMKNVFGTHMVMNNEIEKQIYSQFKRLP 73

Query: 83  GPIPSSMLGLEALTGSLDDFGFEDYLNDPRESESLRPLDMHHGMEVRLGLS 133
             + SSM+GLE + G  +DF F DYL DP  SE+  P  +H  ME RLG++
Sbjct: 74  -TLQSSMVGLETILGLDEDFDFGDYLCDPATSEAPLP-QLHTSMEHRLGMT 122

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BLAST of CmaCh04G028440 vs. Swiss-Prot
Match: POMP_BOVIN (Proteasome maturation protein OS=Bos taurus GN=POMP PE=2 SV=1)

HSP 1 Score: 73.2 bits (178), Expect = 2.6e-12
Identity = 43/116 (37.07%), Postives = 69/116 (59.48%), Query Frame = 1


Query: 16  NDALRFGLQGVKSDLVGSHPVESLYESTRRTEEEMKRKILVNTYGSAFPLKMDLDRQILS 75
           +D LR G   VK++L+ SHP+E   ++ +  +++M    L N  G   PLK+ ++ + + 
Sbjct: 28  HDLLRKGFSCVKNELLPSHPLELSEKNFQLNQDKMNFSTLRNIQGLFAPLKLQMEFKAVQ 87

Query: 76  RFQRPPGPIPSSMLGLEALTGSLDDFGFEDYLNDPRESESLRPLDMHHGMEVRLGL 132
           + QR P  +PSS L L+ L G+ +  GFED LNDP +SE +   + H  +E +LGL
Sbjct: 88  QVQRLPF-LPSSNLSLDILRGNDETIGFEDILNDPSQSELMG--EPHLMVEYKLGL 140

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BLAST of CmaCh04G028440 vs. Swiss-Prot
Match: POMP_MOUSE (Proteasome maturation protein OS=Mus musculus GN=Pomp PE=1 SV=1)

HSP 1 Score: 70.5 bits (171), Expect = 1.7e-11
Identity = 42/116 (36.21%), Postives = 68/116 (58.62%), Query Frame = 1


Query: 16  NDALRFGLQGVKSDLVGSHPVESLYESTRRTEEEMKRKILVNTYGSAFPLKMDLDRQILS 75
           +D LR G   VK++L+ SHP+E   ++ +  +++M    L N  G   PLK+ ++ + + 
Sbjct: 28  HDLLRKGFSCVKNELLPSHPLELSEKNFQLNQDKMNFSTLRNIQGLFAPLKLQMEFKAVQ 87

Query: 76  RFQRPPGPIPSSMLGLEALTGSLDDFGFEDYLNDPRESESLRPLDMHHGMEVRLGL 132
           +  R P  +PSS L L+ L G+ +  GFED LNDP +SE +   + H  +E +LGL
Sbjct: 88  QVHRLPF-LPSSNLSLDILRGNDETIGFEDILNDPSQSELMG--EPHVMVEHKLGL 140

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BLAST of CmaCh04G028440 vs. Swiss-Prot
Match: POMP_HUMAN (Proteasome maturation protein OS=Homo sapiens GN=POMP PE=1 SV=1)

HSP 1 Score: 70.5 bits (171), Expect = 1.7e-11
Identity = 42/116 (36.21%), Postives = 68/116 (58.62%), Query Frame = 1


Query: 16  NDALRFGLQGVKSDLVGSHPVESLYESTRRTEEEMKRKILVNTYGSAFPLKMDLDRQILS 75
           +D LR G   VK++L+ SHP+E   ++ +  +++M    L N  G   PLK+ ++ + + 
Sbjct: 28  HDLLRKGFSCVKNELLPSHPLELSEKNFQLNQDKMNFSTLRNIQGLFAPLKLQMEFKAVQ 87

Query: 76  RFQRPPGPIPSSMLGLEALTGSLDDFGFEDYLNDPRESESLRPLDMHHGMEVRLGL 132
           + QR P  + SS L L+ L G+ +  GFED LNDP +SE +   + H  +E +LGL
Sbjct: 88  QVQRLPF-LSSSNLSLDVLRGNDETIGFEDILNDPSQSEVMG--EPHLMVEYKLGL 140

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BLAST of CmaCh04G028440 vs. TrEMBL
Match: A0A0A0KUK6_CUCSA (Uncharacterized protein OS=Cucumis sativus GN=Csa_5G643970 PE=4 SV=1)

HSP 1 Score: 282.7 bits (722), Expect = 2.4e-73
Identity = 136/141 (96.45%), Postives = 139/141 (98.58%), Query Frame = 1


Query: 1   MESSKTIAHEIGGIQNDALRFGLQGVKSDLVGSHPVESLYESTRRTEEEMKRKILVNTYG 60
           MESSK I HEIGGIQNDALRFGLQGVKSDLVGSHPVESLYE+TRRT+EEMKRK+LVNTYG
Sbjct: 1   MESSKAIPHEIGGIQNDALRFGLQGVKSDLVGSHPVESLYETTRRTQEEMKRKVLVNTYG 60

Query: 61  SAFPLKMDLDRQILSRFQRPPGPIPSSMLGLEALTGSLDDFGFEDYLNDPRESESLRPLD 120
           SAFPLKMDLDRQILSRFQRPPGPIPSSMLGLEALTGSLDDFGFEDYLNDPRESESLRPLD
Sbjct: 61  SAFPLKMDLDRQILSRFQRPPGPIPSSMLGLEALTGSLDDFGFEDYLNDPRESESLRPLD 120

Query: 121 MHHGMEVRLGLSKGPVCPSFM 142
           MHHGMEVRLGLSKGPVCPSFM
Sbjct: 121 MHHGMEVRLGLSKGPVCPSFM 141

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BLAST of CmaCh04G028440 vs. TrEMBL
Match: A0A067K9Y0_JATCU (Uncharacterized protein OS=Jatropha curcas GN=JCGZ_12958 PE=4 SV=1)

HSP 1 Score: 253.8 bits (647), Expect = 1.2e-64
Identity = 120/141 (85.11%), Postives = 133/141 (94.33%), Query Frame = 1


Query: 1   MESSKTIAHEIGGIQNDALRFGLQGVKSDLVGSHPVESLYESTRRTEEEMKRKILVNTYG 60
           ME+ K+IAHEIGGIQNDALRFGL GVKSDLVG+HP+++ Y+S+R+T+EEM RKIL NTYG
Sbjct: 1   MEAPKSIAHEIGGIQNDALRFGLHGVKSDLVGAHPLQTAYQSSRKTQEEMNRKILANTYG 60

Query: 61  SAFPLKMDLDRQILSRFQRPPGPIPSSMLGLEALTGSLDDFGFEDYLNDPRESESLRPLD 120
           SAFPLKMDLDRQILSRFQRPPGPIPSSMLGLEA TGSLDDFGFEDYLNDPRESE+ RPLD
Sbjct: 61  SAFPLKMDLDRQILSRFQRPPGPIPSSMLGLEAHTGSLDDFGFEDYLNDPRESETHRPLD 120

Query: 121 MHHGMEVRLGLSKGPVCPSFM 142
           MHHGMEV+LGLSKGPV PSF+
Sbjct: 121 MHHGMEVQLGLSKGPVYPSFI 141

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BLAST of CmaCh04G028440 vs. TrEMBL
Match: M1AMJ0_SOLTU (Uncharacterized protein OS=Solanum tuberosum GN=PGSC0003DMG400010046 PE=4 SV=1)

HSP 1 Score: 243.4 bits (620), Expect = 1.6e-61
Identity = 111/141 (78.72%), Postives = 128/141 (90.78%), Query Frame = 1


Query: 1   MESSKTIAHEIGGIQNDALRFGLQGVKSDLVGSHPVESLYESTRRTEEEMKRKILVNTYG 60
           ME SK IAHEIGG++NDA RFGL GVKSD+VGSHP+ES Y ST+  ++EMKRKIL NTYG
Sbjct: 1   MEDSKKIAHEIGGVRNDAFRFGLHGVKSDIVGSHPLESSYHSTKARQQEMKRKILANTYG 60

Query: 61  SAFPLKMDLDRQILSRFQRPPGPIPSSMLGLEALTGSLDDFGFEDYLNDPRESESLRPLD 120
           SAFP+K++LDRQILSRFQRPPG IPSSM+GLE+LTG L+DF FEDYLNDP+ESES RP+D
Sbjct: 61  SAFPMKLELDRQILSRFQRPPGAIPSSMIGLESLTGGLEDFAFEDYLNDPKESESFRPVD 120

Query: 121 MHHGMEVRLGLSKGPVCPSFM 142
           MHHG+EVRLGLSKGPVCPSF+
Sbjct: 121 MHHGVEVRLGLSKGPVCPSFI 141

[Close]

BLAST of CmaCh04G028440 vs. TrEMBL
Match: A0A0D2MU78_GOSRA (Uncharacterized protein OS=Gossypium raimondii GN=B456_004G054900 PE=4 SV=1)

HSP 1 Score: 243.4 bits (620), Expect = 1.6e-61
Identity = 114/141 (80.85%), Postives = 130/141 (92.20%), Query Frame = 1


Query: 1   MESSKTIAHEIGGIQNDALRFGLQGVKSDLVGSHPVESLYESTRRTEEEMKRKILVNTYG 60
           ME+ KTI HEIGG+QNDALRFGL GVKSDLVGSHP++S YES ++T+EEMKRK+L NTYG
Sbjct: 1   MEAPKTIQHEIGGVQNDALRFGLHGVKSDLVGSHPLQSAYESAKKTQEEMKRKVLANTYG 60

Query: 61  SAFPLKMDLDRQILSRFQRPPGPIPSSMLGLEALTGSLDDFGFEDYLNDPRESESLRPLD 120
           +A PLKMDLDRQILSRFQRP   +PSSMLGLEA+TG+LDDFGFEDYLNDPR+SE++RPLD
Sbjct: 61  TAMPLKMDLDRQILSRFQRP--LLPSSMLGLEAMTGTLDDFGFEDYLNDPRDSETVRPLD 120

Query: 121 MHHGMEVRLGLSKGPVCPSFM 142
           +HH MEVRLGLSKGPVCPSFM
Sbjct: 121 LHHSMEVRLGLSKGPVCPSFM 139

[Close]

BLAST of CmaCh04G028440 vs. TrEMBL
Match: A0A0V0H2E6_SOLCH (Putative cyclin-B1-2-like OS=Solanum chacoense PE=4 SV=1)

HSP 1 Score: 243.4 bits (620), Expect = 1.6e-61
Identity = 111/141 (78.72%), Postives = 128/141 (90.78%), Query Frame = 1


Query: 1   MESSKTIAHEIGGIQNDALRFGLQGVKSDLVGSHPVESLYESTRRTEEEMKRKILVNTYG 60
           ME SK IAHEIGG++NDA RFGL GVKSD+VGSHP+ES Y ST+  ++EMKRKIL NTYG
Sbjct: 1   MEDSKKIAHEIGGVRNDAFRFGLHGVKSDIVGSHPLESSYHSTKARQQEMKRKILANTYG 60

Query: 61  SAFPLKMDLDRQILSRFQRPPGPIPSSMLGLEALTGSLDDFGFEDYLNDPRESESLRPLD 120
           SAFP+K++LDRQILSRFQRPPG IPSSM+GLE+LTG L+DF FEDYLNDP+ESES RP+D
Sbjct: 61  SAFPMKLELDRQILSRFQRPPGAIPSSMIGLESLTGGLEDFAFEDYLNDPKESESFRPVD 120

Query: 121 MHHGMEVRLGLSKGPVCPSFM 142
           MHHG+EVRLGLSKGPVCPSF+
Sbjct: 121 MHHGVEVRLGLSKGPVCPSFI 141

[Close]

BLAST of CmaCh04G028440 vs. TAIR10
Match: AT5G38650.1 (AT5G38650.1 Proteasome maturation factor UMP1)

HSP 1 Score: 236.9 bits (603), Expect = 7.7e-63
Identity = 108/141 (76.60%), Postives = 128/141 (90.78%), Query Frame = 1


Query: 1   MESSKTIAHEIGGIQNDALRFGLQGVKSDLVGSHPVESLYESTRRTEEEMKRKILVNTYG 60
           MES K IAHEIGG++NDALRFGL GVKSD++ SHP+E+ YES ++++EEMKR+++ +TYG
Sbjct: 1   MESQKKIAHEIGGMKNDALRFGLHGVKSDILRSHPLETAYESGKQSQEEMKRRVITHTYG 60

Query: 61  SAFPLKMDLDRQILSRFQRPPGPIPSSMLGLEALTGSLDDFGFEDYLNDPRESESLRPLD 120
           +A PLKMDLDRQILSRFQRPPGPIPSSMLGLE  TG+LD+FGFEDYLNDPRESE+L+P+D
Sbjct: 61  AALPLKMDLDRQILSRFQRPPGPIPSSMLGLEVYTGALDNFGFEDYLNDPRESETLKPVD 120

Query: 121 MHHGMEVRLGLSKGPVCPSFM 142
            HHGMEVRLGLSKGP  PSFM
Sbjct: 121 FHHGMEVRLGLSKGPASPSFM 141

[Close]

BLAST of CmaCh04G028440 vs. TAIR10
Match: AT1G67250.1 (AT1G67250.1 Proteasome maturation factor UMP1)

HSP 1 Score: 231.5 bits (589), Expect = 3.2e-61
Identity = 102/141 (72.34%), Postives = 126/141 (89.36%), Query Frame = 1


Query: 1   MESSKTIAHEIGGIQNDALRFGLQGVKSDLVGSHPVESLYESTRRTEEEMKRKILVNTYG 60
           MES K IAHEIGG++NDALRFGL GVKS+++GSHP+ES YES ++++E +KR ++ + YG
Sbjct: 1   MESEKKIAHEIGGVKNDALRFGLHGVKSNIIGSHPLESSYESEKKSKEALKRTVIAHAYG 60

Query: 61  SAFPLKMDLDRQILSRFQRPPGPIPSSMLGLEALTGSLDDFGFEDYLNDPRESESLRPLD 120
           +A PLKMD+DRQILSRFQRPPGPIPSSMLGLE  TG++DDFGFEDYLNDPR+SE+ +P+D
Sbjct: 61  TALPLKMDMDRQILSRFQRPPGPIPSSMLGLEVYTGAVDDFGFEDYLNDPRDSETFKPVD 120

Query: 121 MHHGMEVRLGLSKGPVCPSFM 142
            HHGMEVRLG+SKGP+ PSFM
Sbjct: 121 FHHGMEVRLGISKGPIYPSFM 141

[Close]

BLAST of CmaCh04G028440 vs. TAIR10
Match: AT1G62920.1 (AT1G62920.1 Proteasome maturation factor UMP1 (InterPro:IPR008012))

HSP 1 Score: 60.8 bits (146), Expect = 7.5e-10
Identity = 34/71 (47.89%), Postives = 37/71 (52.11%), Query Frame = 1


Query: 62  AFPLKMDLDRQILSRF------------------------QRPPGPIPSSMLGLEALTGS 109
           A PLKMDLDR IL R+                         RP GPIPS ML LE  TG+
Sbjct: 4   ALPLKMDLDRPILPRYGMLDQYHYEIIPLNSDAYSAIRYENRPTGPIPSLMLDLEVYTGA 63

[Close]

BLAST of CmaCh04G028440 vs. NCBI nr
Match: gi|449447480|ref|XP_004141496.1| (PREDICTED: cyclin-B1-2 [Cucumis sativus])

HSP 1 Score: 282.7 bits (722), Expect = 3.5e-73
Identity = 136/141 (96.45%), Postives = 139/141 (98.58%), Query Frame = 1


Query: 1   MESSKTIAHEIGGIQNDALRFGLQGVKSDLVGSHPVESLYESTRRTEEEMKRKILVNTYG 60
           MESSK I HEIGGIQNDALRFGLQGVKSDLVGSHPVESLYE+TRRT+EEMKRK+LVNTYG
Sbjct: 1   MESSKAIPHEIGGIQNDALRFGLQGVKSDLVGSHPVESLYETTRRTQEEMKRKVLVNTYG 60

Query: 61  SAFPLKMDLDRQILSRFQRPPGPIPSSMLGLEALTGSLDDFGFEDYLNDPRESESLRPLD 120
           SAFPLKMDLDRQILSRFQRPPGPIPSSMLGLEALTGSLDDFGFEDYLNDPRESESLRPLD
Sbjct: 61  SAFPLKMDLDRQILSRFQRPPGPIPSSMLGLEALTGSLDDFGFEDYLNDPRESESLRPLD 120

Query: 121 MHHGMEVRLGLSKGPVCPSFM 142
           MHHGMEVRLGLSKGPVCPSFM
Sbjct: 121 MHHGMEVRLGLSKGPVCPSFM 141

[Close]

BLAST of CmaCh04G028440 vs. NCBI nr
Match: gi|659119064|ref|XP_008459455.1| (PREDICTED: cyclin-B1-2-like [Cucumis melo])

HSP 1 Score: 282.0 bits (720), Expect = 5.9e-73
Identity = 136/141 (96.45%), Postives = 139/141 (98.58%), Query Frame = 1


Query: 1   MESSKTIAHEIGGIQNDALRFGLQGVKSDLVGSHPVESLYESTRRTEEEMKRKILVNTYG 60
           M+SSK I HEIGGIQNDALRFGLQGVKSDLVGSHPVESLYE+TRRT+EEMKRKILVNTYG
Sbjct: 1   MDSSKAIPHEIGGIQNDALRFGLQGVKSDLVGSHPVESLYETTRRTQEEMKRKILVNTYG 60

Query: 61  SAFPLKMDLDRQILSRFQRPPGPIPSSMLGLEALTGSLDDFGFEDYLNDPRESESLRPLD 120
           SAFPLKMDLDRQILSRFQRPPGPIPSSMLGLEALTGSLDDFGFEDYLNDPRESESLRPLD
Sbjct: 61  SAFPLKMDLDRQILSRFQRPPGPIPSSMLGLEALTGSLDDFGFEDYLNDPRESESLRPLD 120

Query: 121 MHHGMEVRLGLSKGPVCPSFM 142
           MHHGMEVRLGLSKGPVCPSFM
Sbjct: 121 MHHGMEVRLGLSKGPVCPSFM 141

[Close]

BLAST of CmaCh04G028440 vs. NCBI nr
Match: gi|802634283|ref|XP_012077931.1| (PREDICTED: cyclin-B1-2 [Jatropha curcas])

HSP 1 Score: 253.8 bits (647), Expect = 1.7e-64
Identity = 120/141 (85.11%), Postives = 133/141 (94.33%), Query Frame = 1


Query: 1   MESSKTIAHEIGGIQNDALRFGLQGVKSDLVGSHPVESLYESTRRTEEEMKRKILVNTYG 60
           ME+ K+IAHEIGGIQNDALRFGL GVKSDLVG+HP+++ Y+S+R+T+EEM RKIL NTYG
Sbjct: 1   MEAPKSIAHEIGGIQNDALRFGLHGVKSDLVGAHPLQTAYQSSRKTQEEMNRKILANTYG 60

Query: 61  SAFPLKMDLDRQILSRFQRPPGPIPSSMLGLEALTGSLDDFGFEDYLNDPRESESLRPLD 120
           SAFPLKMDLDRQILSRFQRPPGPIPSSMLGLEA TGSLDDFGFEDYLNDPRESE+ RPLD
Sbjct: 61  SAFPLKMDLDRQILSRFQRPPGPIPSSMLGLEAHTGSLDDFGFEDYLNDPRESETHRPLD 120

Query: 121 MHHGMEVRLGLSKGPVCPSFM 142
           MHHGMEV+LGLSKGPV PSF+
Sbjct: 121 MHHGMEVQLGLSKGPVYPSFI 141

[Close]

BLAST of CmaCh04G028440 vs. NCBI nr
Match: gi|729399985|ref|XP_010553935.1| (PREDICTED: cyclin-B1-2-like [Tarenaya hassleriana])

HSP 1 Score: 253.4 bits (646), Expect = 2.2e-64
Identity = 116/141 (82.27%), Postives = 131/141 (92.91%), Query Frame = 1


Query: 1   MESSKTIAHEIGGIQNDALRFGLQGVKSDLVGSHPVESLYESTRRTEEEMKRKILVNTYG 60
           MESSK IAHEIGG++NDALRFGL GVKSD+VGSHP+ES YES +R +EEM+RKI+ NTYG
Sbjct: 1   MESSKKIAHEIGGVKNDALRFGLHGVKSDIVGSHPLESAYESEKRVQEEMRRKIITNTYG 60

Query: 61  SAFPLKMDLDRQILSRFQRPPGPIPSSMLGLEALTGSLDDFGFEDYLNDPRESESLRPLD 120
           +A PLKMDLDRQI SRFQRPPGPIPSSMLGLE  TG+LDDFGFEDYLNDPRESE+L+P+D
Sbjct: 61  AALPLKMDLDRQIFSRFQRPPGPIPSSMLGLEVYTGALDDFGFEDYLNDPRESETLKPVD 120

Query: 121 MHHGMEVRLGLSKGPVCPSFM 142
           +HHGMEVRLGLSKGPVCPSF+
Sbjct: 121 LHHGMEVRLGLSKGPVCPSFV 141

[Close]

BLAST of CmaCh04G028440 vs. NCBI nr
Match: gi|729306118|ref|XP_010528461.1| (PREDICTED: cyclin-B1-2-like [Tarenaya hassleriana])

HSP 1 Score: 252.7 bits (644), Expect = 3.8e-64
Identity = 115/141 (81.56%), Postives = 131/141 (92.91%), Query Frame = 1


Query: 1   MESSKTIAHEIGGIQNDALRFGLQGVKSDLVGSHPVESLYESTRRTEEEMKRKILVNTYG 60
           MESSK IAHEIGG++NDALRFGL GVKSD+VGSHP+ES YES R+ +EEM+RKI++NTYG
Sbjct: 1   MESSKKIAHEIGGVKNDALRFGLHGVKSDIVGSHPLESAYESERKVQEEMRRKIIMNTYG 60

Query: 61  SAFPLKMDLDRQILSRFQRPPGPIPSSMLGLEALTGSLDDFGFEDYLNDPRESESLRPLD 120
           +A PLKMDLDRQI SRFQRPPGPIPSSMLGLE  TG+LDDFGFEDYLNDPRESE+ +P+D
Sbjct: 61  AALPLKMDLDRQIFSRFQRPPGPIPSSMLGLEVYTGALDDFGFEDYLNDPRESETFKPVD 120

Query: 121 MHHGMEVRLGLSKGPVCPSFM 142
           +HHGMEVR+GLSKGPVCPSFM
Sbjct: 121 LHHGMEVRVGLSKGPVCPSFM 141

The following BLAST results are available for this feature:

BLAST of CmaCh04G028440 vs. Swiss-Prot


Match Name	E-value	Identity	Description
CCB12_ORYSJ	3.9e-24	53.04	Cyclin-B1-2 OS=Oryza sativa subsp. japonica GN=CYCB1-2 PE=3 SV=1	[more]
POMP_DICDI	1.8e-13	39.64	Proteasome maturation protein homolog OS=Dictyostelium discoideum GN=pomp PE=3 S...	[more]
POMP_BOVIN	2.6e-12	37.07	Proteasome maturation protein OS=Bos taurus GN=POMP PE=2 SV=1	[more]
POMP_MOUSE	1.7e-11	36.21	Proteasome maturation protein OS=Mus musculus GN=Pomp PE=1 SV=1	[more]
POMP_HUMAN	1.7e-11	36.21	Proteasome maturation protein OS=Homo sapiens GN=POMP PE=1 SV=1	[more]

BLAST of CmaCh04G028440 vs. TrEMBL


Match Name	E-value	Identity	Description
A0A0A0KUK6_CUCSA	2.4e-73	96.45	Uncharacterized protein OS=Cucumis sativus GN=Csa_5G643970 PE=4 SV=1	[more]
A0A067K9Y0_JATCU	1.2e-64	85.11	Uncharacterized protein OS=Jatropha curcas GN=JCGZ_12958 PE=4 SV=1	[more]
M1AMJ0_SOLTU	1.6e-61	78.72	Uncharacterized protein OS=Solanum tuberosum GN=PGSC0003DMG400010046 PE=4 SV=1	[more]
A0A0D2MU78_GOSRA	1.6e-61	80.85	Uncharacterized protein OS=Gossypium raimondii GN=B456_004G054900 PE=4 SV=1	[more]
A0A0V0H2E6_SOLCH	1.6e-61	78.72	Putative cyclin-B1-2-like OS=Solanum chacoense PE=4 SV=1	[more]

BLAST of CmaCh04G028440 vs. TAIR10


Match Name	E-value	Identity	Description
AT5G38650.1	7.7e-63	76.60	Proteasome maturation factor UMP1	[more]
AT1G67250.1	3.2e-61	72.34	Proteasome maturation factor UMP1	[more]
AT1G62920.1	7.5e-10	47.89	Proteasome maturation factor UMP1 (InterPro:IPR008012)	[more]

BLAST of CmaCh04G028440 vs. NCBI nr


Match Name	E-value	Identity	Description
gi\|449447480\|ref\|XP_004141496.1\|	3.5e-73	96.45	PREDICTED: cyclin-B1-2 [Cucumis sativus]	[more]
gi\|659119064\|ref\|XP_008459455.1\|	5.9e-73	96.45	PREDICTED: cyclin-B1-2-like [Cucumis melo]	[more]
gi\|802634283\|ref\|XP_012077931.1\|	1.7e-64	85.11	PREDICTED: cyclin-B1-2 [Jatropha curcas]	[more]
gi\|729399985\|ref\|XP_010553935.1\|	2.2e-64	82.27	PREDICTED: cyclin-B1-2-like [Tarenaya hassleriana]	[more]
gi\|729306118\|ref\|XP_010528461.1\|	3.8e-64	81.56	PREDICTED: cyclin-B1-2-like [Tarenaya hassleriana]	[more]

Annotated Terms

The following terms have been associated with this gene:

Vocabulary: **INTERPRO**
Term	Definition
IPR008012	Ump1

Vocabulary: **Biological Process**
Term	Definition
GO:0043248	proteasome assembly

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0043248	proteasome assembly
biological_process	GO:0006446	regulation of translational initiation
biological_process	GO:0008150	biological_process
cellular_component	GO:0000502	proteasome complex
cellular_component	GO:0005840	ribosome
cellular_component	GO:0005575	cellular_component
molecular_function	GO:0003674	molecular_function
molecular_function	GO:0003743	translation initiation factor activity

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
CmaCh04G028440.1	CmaCh04G028440.1	mRNA

InterPro

Analysis Name: InterPro Annotations of Cucurbita maxima
Date Performed: 2017-05-20


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR008012	Proteasome maturation factor Ump1	PANTHER	PTHR12828	PROTEASOME MATURATION PROTEIN UMP1	coord: 1..141 score: 5.4
None	No IPR available	PFAM	PF05348	UMP1	coord: 15..129 score: 1.1

Synteny

The following gene(s) are orthologous to this gene:


Gene	Orthologue	Organism	Block
CmaCh04G028440	Cucsa.238150	Cucumber (Gy14) v1	cgycmaB0663
CmaCh04G028440	Cla016458	Watermelon (97103) v1	cmawmB736
CmaCh04G028440	Csa5G643970	Cucumber (Chinese Long) v2	cmacuB723
CmaCh04G028440	MELO3C022086	Melon (DHL92) v3.5.1	cmameB634
CmaCh04G028440	ClCG11G005320	Watermelon (Charleston Gray)	cmawcgB619
CmaCh04G028440	CSPI05G29970	Wild cucumber (PI 183967)	cmacpiB730
CmaCh04G028440	CmoCh04G029730	Cucurbita moschata (Rifu)	cmacmoB729
CmaCh04G028440	CmoCh15G002050	Cucurbita moschata (Rifu)	cmacmoB692
CmaCh04G028440	Lsi03G002260	Bottle gourd (USVL1VR-Ls)	cmalsiB656
CmaCh04G028440	Cp4.1LG13g07830	Cucurbita pepo (Zucchini)	cmacpeB705
CmaCh04G028440	Cp4.1LG01g22160	Cucurbita pepo (Zucchini)	cmacpeB721
CmaCh04G028440	MELO3C022086.2	Melon (DHL92) v3.6.1	cmamedB720
CmaCh04G028440	CsaV3_5G039100	Cucumber (Chinese Long) v3	cmacucB0860
CmaCh04G028440	Cla97C11G212240	Watermelon (97103) v2	cmawmbB724
CmaCh04G028440	Bhi06G000072	Wax gourd	cmawgoB0837
CmaCh04G028440	CsGy5G029370	Cucumber (Gy14) v2	cgybcmaB647
CmaCh04G028440	Carg02184	Silver-seed gourd	carcmaB0374
CmaCh04G028440	Carg05920	Silver-seed gourd	carcmaB0033

The following gene(s) are paralogous to this gene:


Gene	Paralogue	Organism	Block
CmaCh04G028440	CmaCh15G001910	Cucurbita maxima (Rimu)	cmacmaB324

The following block(s) are covering this gene:


Gene	Organism	Block
CmaCh04G028440	Cucurbita maxima (Rimu)	cmacmaB515
CmaCh04G028440	Cucumber (Gy14) v1	cgycmaB0662
CmaCh04G028440	Cucurbita moschata (Rifu)	cmacmoB724
CmaCh04G028440	Cucumber (Chinese Long) v2	cmacuB755
CmaCh04G028440	Melon (DHL92) v3.5.1	cmameB626
CmaCh04G028440	Melon (DHL92) v3.5.1	cmameB627
CmaCh04G028440	Cucurbita pepo (Zucchini)	cmacpeB701
CmaCh04G028440	Bottle gourd (USVL1VR-Ls)	cmalsiB641
CmaCh04G028440	Cucumber (Gy14) v2	cgybcmaB550
CmaCh04G028440	Cucumber (Chinese Long) v3	cmacucB0816
CmaCh04G028440	Cucumber (Chinese Long) v3	cmacucB0851
CmaCh04G028440	Cucumber (Chinese Long) v3	cmacucB0895
CmaCh04G028440	Watermelon (97103) v2	cmawmbB752
CmaCh04G028440	Wax gourd	cmawgoB0882