Carg02184 (gene) Silver-seed gourd | Cucurbit Genomics Database (CuGenDB)

Overview


Name	Carg02184
Type	gene
Organism	Cucurbita argyrosperma (Silver-seed gourd)
Description	Proteasome maturation protein, putative
Location	Cucurbita_argyrosperma_scaffold_007 : 486165 .. 488574 (+)

Genome Viewer

Gene Expression

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: polypeptideexonCDS

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGGAGTCTTCGAAGGCCATTCCCCATGAAATCGGAGGGATCCAGAATGATGCCCTTCGATTTGGGCTCCAAGGCGTGAAGAGCGATCTCGTTGGATCTCATCCTGTTGAATCCATCTATGAAACTGTAATTTCCCCTCTTCCTTCTCTCTCAGTTTTTTCAATCTAAGTTGTCTCACTTGGTTTCTATATCGCTTCGGCTGTTTAGTAATTGCCATTAGACAAGATAATCTGGGTTCGATGGAGCTGATGAACCACTTGTTTGTTTAAGTTACTCGGATTAGAAACTTGTAGCTTCATGTTTTACTTCCTGGTTTTTTTGCTCAAATTTCTCATTGTACTCCCTTATTTTGAAATTCTTGGGGTCTGGTTTTATCAATTGTTGTAAAATGGTGCTGAGAATTTCATTTCAGAGTGATTTATCTAGTGTCCCATTTGACCTCTGTATAGAAAAAACTACGAGATTCCACTTCGGTCGGAGAGGGGAACGAAATATTCTTTATAAGGATATGGAAACCTCTCCCTAGTAGACACGTTTCAAAACCGTGAGACCAACGGCGATACGTAACGAACCAAAGAGGACAATATCTGCTAGCAGTGACTTTGGATTGTTACTAATGGGATTAGAGCTGGACACTGTGAATTGAGAGGTCCAGGAGAAGGGAACAAGTGCCAAGGACGCTGGGTCCTGAAAGGAGTGGATTGTGAGATCCCACATCGGTTGGAGAGGGGAACGAAACATTCTTTGTAAGGGTGTGGAAACCTCTCCCTAGTAGACGAGTTTCAAAATTGAGAGGCCAACGACGATAGGTAACGAGCCAAAGAGAACAATATCTGCTAGTAGTGGCCTTAGATTCGTAGAGAACAATATCTGCTAGTAGTGGCCTTGGATTCGTTACAAATGGGATTAGAGCTAGACACTATGAATTGAGAGGTCCTGGAGAAGGGAACAAGTGTCAGTGAGGACGCTAGGTCCCAAAAGGGGTGGATTGTGAGATCCCACGTCGGTTGAAGAGGGGAACGATGCATTCTTTATAAGGGTGTGGAAACCTCTCCCTAATAGACACGTTTTAAAATCATGAGGGGGATGAACCACAATACATTCCTTTGAATACTTGGGATGAAAAAACAAGCTCGATCTCGTTGGTTAAATTAATTTTTTTCTTGATATAGACGAGAAGAACAGAAGAAGAGATGAAAAGGAAAATTCTGGTGAATACATATGGATCTGCTTTTCCATTGAAGATGGATTTTGAGAGGCAAATTCTTTCTCGGTAAGGCCACTCTTCTTGTATTGATGCTGTATCTCTCTTGGTGTGTTCTAAATTGGAGCACTTGTTTATTTTAACTTAAAACTACTGCAGATTTCAAAGGCCTCTAGGACCTATTCCATCTTCAATGTTGGGTTTGGAGGCTCTTACTGGAAGCTTGGATGACTTTGGCTTTGAAGATTATCTAAATGGTAAAATAAATCCATATAACTCATCTGATTCTGTTCTCTATTATACATTTTCATCATTAGTTAGAGCTTTTTCATTGCCTTAAATATTTCTTTTGAGGGTAATGAGTTTTTTTAGGACTCTTATTAAGTCACCCAAGTGTCTACATGGTTGAGGAAAGGGAAGGAGGGATCGAGTGATGTAAATGTGTAAGGGTCGAAATCCATAGTCGGGTATGTATGTGTTGTGTGATTCTGCGGGGGTGTCACAATCGCACTCTTGCGGCTACGGGACAGTGATTGTGCGACACTTGTTCTAATTCGGCGAACAAGTCAGCCGTGAGAAATTCTGACTTTGTAGACTATGACAGCGTATTGTAGAGCCTCAAGTCATGTTTAAGAGAAATATATTGGAAAACGTGAGTGAGGAAATACGTTGAAAACAATTTGAAAGAAAACAATGTTATAAACTAAAAGCGATTAGGCACGACTTTAATAGCATGATTAGTCATATCCCTCTATAGTACATTTCGCGGCATTTTAGCCTTGGCGGGTGTAGACATGATTTTGGTGATCGGTCATACACTCTCATGTTGACACAACATGAAAGAGTAAAGATATCTAAGATGAAAGCATGCAAAAGGGGTTTGGAATGGACATGCAGTCATGGACAAAACGTCTTGGACAAGCATGACCGTGACCGGGACATCCGACATAAGGAGGATGAAATACTTCGTGCTTTCTTTTTCACTTTGACTTAACATAATGAATCTCAATTGTGCAGTCCATCTGTCGCTTAAAATACACATTTTAGATAATAGTCTCTGCCAGTGTTAATCTATACACCTTGTTTATGTGAACGTGATCTGCAGACCCAAGGGAATCTGAATCTTTGAGGCCATTGGACATGCACCATGGAATGGAAGTCCGCCTTGGCCTGTCCAAGGGACCAGTTTGCCCAAGTTTCATATAA

mRNA sequence

ATGGAGTCTTCGAAGGCCATTCCCCATGAAATCGGAGGGATCCAGAATGATGCCCTTCGATTTGGGCTCCAAGGCGTGAAGAGCGATCTCGTTGGATCTCATCCTGTTGAATCCATCTATGAAACTACGAGAAGAACAGAAGAAGAGATGAAAAGGAAAATTCTGGTGAATACATATGGATCTGCTTTTCCATTGAAGATGGATTTTGAGAGGCAAATTCTTTCTCGATTTCAAAGGCCTCTAGGACCTATTCCATCTTCAATGTTGGGTTTGGAGGCTCTTACTGGAAGCTTGGATGACTTTGGCTTTGAAGATTATCTAAATGACCCAAGGGAATCTGAATCTTTGAGGCCATTGGACATGCACCATGGAATGGAAGTCCGCCTTGGCCTGTCCAAGGGACCAGTTTGCCCAAGTTTCATATAA

Coding sequence (CDS)

ATGGAGTCTTCGAAGGCCATTCCCCATGAAATCGGAGGGATCCAGAATGATGCCCTTCGATTTGGGCTCCAAGGCGTGAAGAGCGATCTCGTTGGATCTCATCCTGTTGAATCCATCTATGAAACTACGAGAAGAACAGAAGAAGAGATGAAAAGGAAAATTCTGGTGAATACATATGGATCTGCTTTTCCATTGAAGATGGATTTTGAGAGGCAAATTCTTTCTCGATTTCAAAGGCCTCTAGGACCTATTCCATCTTCAATGTTGGGTTTGGAGGCTCTTACTGGAAGCTTGGATGACTTTGGCTTTGAAGATTATCTAAATGACCCAAGGGAATCTGAATCTTTGAGGCCATTGGACATGCACCATGGAATGGAAGTCCGCCTTGGCCTGTCCAAGGGACCAGTTTGCCCAAGTTTCATATAA

Protein sequence

MESSKAIPHEIGGIQNDALRFGLQGVKSDLVGSHPVESIYETTRRTEEEMKRKILVNTYGSAFPLKMDFERQILSRFQRPLGPIPSSMLGLEALTGSLDDFGFEDYLNDPRESESLRPLDMHHGMEVRLGLSKGPVCPSFI

Homology

[Close]

BLAST of Carg02184 vs. NCBI nr
Match: XP_022939098.1 (cyclin-B1-2-like [Cucurbita moschata] >XP_023550448.1 cyclin-B1-2-like [Cucurbita pepo subsp. pepo])

HSP 1 Score: 287.7 bits (735), Expect = 2.1e-74
Identity = 140/141 (99.29%), Postives = 140/141 (99.29%), Query Frame = 0


Query: 1   MESSKAIPHEIGGIQNDALRFGLQGVKSDLVGSHPVESIYETTRRTEEEMKRKILVNTYG 60
           MESSKAIPHEIGGIQNDALRFGLQGVKSDLVGSHPVESIYETTRRTEEEMKRKILVNTYG
Sbjct: 1   MESSKAIPHEIGGIQNDALRFGLQGVKSDLVGSHPVESIYETTRRTEEEMKRKILVNTYG 60

Query: 61  SAFPLKMDFERQILSRFQRPLGPIPSSMLGLEALTGSLDDFGFEDYLNDPRESESLRPLD 120
           SAFPLKMDFERQILSRFQRP GPIPSSMLGLEALTGSLDDFGFEDYLNDPRESESLRPLD
Sbjct: 61  SAFPLKMDFERQILSRFQRPPGPIPSSMLGLEALTGSLDDFGFEDYLNDPRESESLRPLD 120

Query: 121 MHHGMEVRLGLSKGPVCPSFI 142
           MHHGMEVRLGLSKGPVCPSFI
Sbjct: 121 MHHGMEVRLGLSKGPVCPSFI 141

[Close]

BLAST of Carg02184 vs. NCBI nr
Match: XP_022993234.1 (cyclin-B1-2-like [Cucurbita maxima])

HSP 1 Score: 283.1 bits (723), Expect = 5.2e-73
Identity = 138/141 (97.87%), Postives = 139/141 (98.58%), Query Frame = 0


Query: 1   MESSKAIPHEIGGIQNDALRFGLQGVKSDLVGSHPVESIYETTRRTEEEMKRKILVNTYG 60
           MESSKAIPHEIGGIQNDALRFGLQGVKSDLVGSHPVESIYETTRRTEEEMKRKILVNTYG
Sbjct: 1   MESSKAIPHEIGGIQNDALRFGLQGVKSDLVGSHPVESIYETTRRTEEEMKRKILVNTYG 60

Query: 61  SAFPLKMDFERQILSRFQRPLGPIPSSMLGLEALTGSLDDFGFEDYLNDPRESESLRPLD 120
           SAFPLKMDFERQILSRFQRP GPI SSMLGLEALTGSLDDFGFEDYLNDPRESESLRPLD
Sbjct: 61  SAFPLKMDFERQILSRFQRPPGPISSSMLGLEALTGSLDDFGFEDYLNDPRESESLRPLD 120

Query: 121 MHHGMEVRLGLSKGPVCPSFI 142
           MHHG+EVRLGLSKGPVCPSFI
Sbjct: 121 MHHGIEVRLGLSKGPVCPSFI 141

[Close]

BLAST of Carg02184 vs. NCBI nr
Match: XP_004141496.1 (PREDICTED: cyclin-B1-2 [Cucumis sativus] >KGN52569.1 hypothetical protein Csa_5G643970 [Cucumis sativus])

HSP 1 Score: 280.8 bits (717), Expect = 2.6e-72
Identity = 134/141 (95.04%), Postives = 139/141 (98.58%), Query Frame = 0


Query: 1   MESSKAIPHEIGGIQNDALRFGLQGVKSDLVGSHPVESIYETTRRTEEEMKRKILVNTYG 60
           MESSKAIPHEIGGIQNDALRFGLQGVKSDLVGSHPVES+YETTRRT+EEMKRK+LVNTYG
Sbjct: 1   MESSKAIPHEIGGIQNDALRFGLQGVKSDLVGSHPVESLYETTRRTQEEMKRKVLVNTYG 60

Query: 61  SAFPLKMDFERQILSRFQRPLGPIPSSMLGLEALTGSLDDFGFEDYLNDPRESESLRPLD 120
           SAFPLKMD +RQILSRFQRP GPIPSSMLGLEALTGSLDDFGFEDYLNDPRESESLRPLD
Sbjct: 61  SAFPLKMDLDRQILSRFQRPPGPIPSSMLGLEALTGSLDDFGFEDYLNDPRESESLRPLD 120

Query: 121 MHHGMEVRLGLSKGPVCPSFI 142
           MHHGMEVRLGLSKGPVCPSF+
Sbjct: 121 MHHGMEVRLGLSKGPVCPSFM 141

[Close]

BLAST of Carg02184 vs. NCBI nr
Match: XP_008459455.1 (PREDICTED: cyclin-B1-2 [Cucumis melo])

HSP 1 Score: 280.0 bits (715), Expect = 4.4e-72
Identity = 134/141 (95.04%), Postives = 139/141 (98.58%), Query Frame = 0


Query: 1   MESSKAIPHEIGGIQNDALRFGLQGVKSDLVGSHPVESIYETTRRTEEEMKRKILVNTYG 60
           M+SSKAIPHEIGGIQNDALRFGLQGVKSDLVGSHPVES+YETTRRT+EEMKRKILVNTYG
Sbjct: 1   MDSSKAIPHEIGGIQNDALRFGLQGVKSDLVGSHPVESLYETTRRTQEEMKRKILVNTYG 60

Query: 61  SAFPLKMDFERQILSRFQRPLGPIPSSMLGLEALTGSLDDFGFEDYLNDPRESESLRPLD 120
           SAFPLKMD +RQILSRFQRP GPIPSSMLGLEALTGSLDDFGFEDYLNDPRESESLRPLD
Sbjct: 61  SAFPLKMDLDRQILSRFQRPPGPIPSSMLGLEALTGSLDDFGFEDYLNDPRESESLRPLD 120

Query: 121 MHHGMEVRLGLSKGPVCPSFI 142
           MHHGMEVRLGLSKGPVCPSF+
Sbjct: 121 MHHGMEVRLGLSKGPVCPSFM 141

[Close]

BLAST of Carg02184 vs. NCBI nr
Match: XP_022956483.1 (cyclin-B1-2-like [Cucurbita moschata])

HSP 1 Score: 276.2 bits (705), Expect = 6.3e-71
Identity = 133/141 (94.33%), Postives = 137/141 (97.16%), Query Frame = 0


Query: 1   MESSKAIPHEIGGIQNDALRFGLQGVKSDLVGSHPVESIYETTRRTEEEMKRKILVNTYG 60
           MESSK I HEIGGIQNDALRFGLQGVKSDLVGSHPVES+YETTRRTEEEMKRKILVNTYG
Sbjct: 1   MESSKTIAHEIGGIQNDALRFGLQGVKSDLVGSHPVESLYETTRRTEEEMKRKILVNTYG 60

Query: 61  SAFPLKMDFERQILSRFQRPLGPIPSSMLGLEALTGSLDDFGFEDYLNDPRESESLRPLD 120
           SAFPLKMD +RQILSRFQRP GPIPSSMLGLEALTGSLDDFGFEDYLNDPRESESLRPLD
Sbjct: 61  SAFPLKMDLDRQILSRFQRPPGPIPSSMLGLEALTGSLDDFGFEDYLNDPRESESLRPLD 120

Query: 121 MHHGMEVRLGLSKGPVCPSFI 142
           MHHG+EVRLGLSKGPVCPSF+
Sbjct: 121 MHHGIEVRLGLSKGPVCPSFM 141

[Close]

BLAST of Carg02184 vs. TAIR10
Match: AT5G38650.1 (Proteasome maturation factor UMP1)

HSP 1 Score: 226.5 bits (576), Expect = 1.0e-59
Identity = 102/141 (72.34%), Postives = 125/141 (88.65%), Query Frame = 0


Query: 1   MESSKAIPHEIGGIQNDALRFGLQGVKSDLVGSHPVESIYETTRRTEEEMKRKILVNTYG 60
           MES K I HEIGG++NDALRFGL GVKSD++ SHP+E+ YE+ ++++EEMKR+++ +TYG
Sbjct: 1   MESQKKIAHEIGGMKNDALRFGLHGVKSDILRSHPLETAYESGKQSQEEMKRRVITHTYG 60

Query: 61  SAFPLKMDFERQILSRFQRPLGPIPSSMLGLEALTGSLDDFGFEDYLNDPRESESLRPLD 120
           +A PLKMD +RQILSRFQRP GPIPSSMLGLE  TG+LD+FGFEDYLNDPRESE+L+P+D
Sbjct: 61  AALPLKMDLDRQILSRFQRPPGPIPSSMLGLEVYTGALDNFGFEDYLNDPRESETLKPVD 120

Query: 121 MHHGMEVRLGLSKGPVCPSFI 142
            HHGMEVRLGLSKGP  PSF+
Sbjct: 121 FHHGMEVRLGLSKGPASPSFM 141

[Close]

BLAST of Carg02184 vs. TAIR10
Match: AT1G67250.1 (Proteasome maturation factor UMP1)

HSP 1 Score: 221.9 bits (564), Expect = 2.6e-58
Identity = 97/141 (68.79%), Postives = 123/141 (87.23%), Query Frame = 0


Query: 1   MESSKAIPHEIGGIQNDALRFGLQGVKSDLVGSHPVESIYETTRRTEEEMKRKILVNTYG 60
           MES K I HEIGG++NDALRFGL GVKS+++GSHP+ES YE+ ++++E +KR ++ + YG
Sbjct: 1   MESEKKIAHEIGGVKNDALRFGLHGVKSNIIGSHPLESSYESEKKSKEALKRTVIAHAYG 60

Query: 61  SAFPLKMDFERQILSRFQRPLGPIPSSMLGLEALTGSLDDFGFEDYLNDPRESESLRPLD 120
           +A PLKMD +RQILSRFQRP GPIPSSMLGLE  TG++DDFGFEDYLNDPR+SE+ +P+D
Sbjct: 61  TALPLKMDMDRQILSRFQRPPGPIPSSMLGLEVYTGAVDDFGFEDYLNDPRDSETFKPVD 120

Query: 121 MHHGMEVRLGLSKGPVCPSFI 142
            HHGMEVRLG+SKGP+ PSF+
Sbjct: 121 FHHGMEVRLGISKGPIYPSFM 141

[Close]

BLAST of Carg02184 vs. TAIR10
Match: AT1G62920.1 (Proteasome maturation factor UMP1 (InterPro:IPR008012))

HSP 1 Score: 57.8 bits (138), Expect = 6.4e-09
Identity = 32/71 (45.07%), Postives = 36/71 (50.70%), Query Frame = 0


Query: 62  AFPLKMDFERQILSRF------------------------QRPLGPIPSSMLGLEALTGS 109
           A PLKMD +R IL R+                         RP GPIPS ML LE  TG+
Sbjct: 4   ALPLKMDLDRPILPRYGMLDQYHYEIIPLNSDAYSAIRYENRPTGPIPSLMLDLEVYTGA 63

[Close]

BLAST of Carg02184 vs. Swiss-Prot
Match: sp|Q0DWQ7|CCB12_ORYSJ (Cyclin-B1-2 OS=Oryza sativa subsp. japonica OX=39947 GN=CYCB1-2 PE=3 SV=1)

HSP 1 Score: 105.5 bits (262), Expect = 4.8e-22
Identity = 58/115 (50.43%), Postives = 72/115 (62.61%), Query Frame = 0


Query: 1   MESSKAIPHEIGGIQNDALRFGL-QGVKSDLVGSHPVESIYETTRRTEEEMKRKILVNTY 60
           M S   +  EIGG  +D +RFG+   VK DL   HP+++      +   + KR      Y
Sbjct: 1   MASGGVVKKEIGG-NHDVVRFGVNDSVKGDLAPPHPLQASVHKEAKFWADKKRFGAEAIY 60

Query: 61  GSAFPLKMDFERQILSRFQRPLGPIPSSMLGLEALTGSLDDFGFEDYLNDPRESE 115
           GSAF ++ D + QILS+FQRP G +PSSMLG EALTGSLDDFGFEDYLN    SE
Sbjct: 61  GSAFNIRKDLDAQILSKFQRPPGALPSSMLGYEALTGSLDDFGFEDYLNYAAASE 114

[Close]

BLAST of Carg02184 vs. Swiss-Prot
Match: sp|Q55G18|POMP_DICDI (Proteasome maturation protein homolog OS=Dictyostelium discoideum OX=44689 GN=pomp PE=3 SV=1)

HSP 1 Score: 77.4 bits (189), Expect = 1.4e-13
Identity = 46/111 (41.44%), Postives = 68/111 (61.26%), Query Frame = 0


Query: 23  LQGVKSDLVG-SHPVESIYETTRRTEEEMKRKILVNTYGSAFPLKMDFERQILSRFQRPL 82
           L+   S++ G SHPVESI     +TE ++K   + N +G+   +  + E+QI S+F+R L
Sbjct: 14  LRNESSNVKGLSHPVESIQLDQGKTEIKLKNFAMKNVFGTHMVMNNEIEKQIYSQFKR-L 73

Query: 83  GPIPSSMLGLEALTGSLDDFGFEDYLNDPRESESLRPLDMHHGMEVRLGLS 133
             + SSM+GLE + G  +DF F DYL DP  SE+  P  +H  ME RLG++
Sbjct: 74  PTLQSSMVGLETILGLDEDFDFGDYLCDPATSEAPLP-QLHTSMEHRLGMT 122

[Close]

BLAST of Carg02184 vs. Swiss-Prot
Match: sp|Q3SZV5|POMP_BOVIN (Proteasome maturation protein OS=Bos taurus OX=9913 GN=POMP PE=2 SV=1)

HSP 1 Score: 72.4 bits (176), Expect = 4.5e-12
Identity = 44/116 (37.93%), Postives = 67/116 (57.76%), Query Frame = 0


Query: 16  NDALRFGLQGVKSDLVGSHPVESIYETTRRTEEEMKRKILVNTYGSAFPLKMDFERQILS 75
           +D LR G   VK++L+ SHP+E   +  +  +++M    L N  G   PLK+  E + + 
Sbjct: 28  HDLLRKGFSCVKNELLPSHPLELSEKNFQLNQDKMNFSTLRNIQGLFAPLKLQMEFKAVQ 87

Query: 76  RFQRPLGPIPSSMLGLEALTGSLDDFGFEDYLNDPRESESLRPLDMHHGMEVRLGL 132
           + QR L  +PSS L L+ L G+ +  GFED LNDP +SE +   + H  +E +LGL
Sbjct: 88  QVQR-LPFLPSSNLSLDILRGNDETIGFEDILNDPSQSELMG--EPHLMVEYKLGL 140

[Close]

BLAST of Carg02184 vs. Swiss-Prot
Match: sp|Q9Y244|POMP_HUMAN (Proteasome maturation protein OS=Homo sapiens OX=9606 GN=POMP PE=1 SV=1)

HSP 1 Score: 69.7 bits (169), Expect = 2.9e-11
Identity = 43/116 (37.07%), Postives = 66/116 (56.90%), Query Frame = 0


Query: 16  NDALRFGLQGVKSDLVGSHPVESIYETTRRTEEEMKRKILVNTYGSAFPLKMDFERQILS 75
           +D LR G   VK++L+ SHP+E   +  +  +++M    L N  G   PLK+  E + + 
Sbjct: 28  HDLLRKGFSCVKNELLPSHPLELSEKNFQLNQDKMNFSTLRNIQGLFAPLKLQMEFKAVQ 87

Query: 76  RFQRPLGPIPSSMLGLEALTGSLDDFGFEDYLNDPRESESLRPLDMHHGMEVRLGL 132
           + QR L  + SS L L+ L G+ +  GFED LNDP +SE +   + H  +E +LGL
Sbjct: 88  QVQR-LPFLSSSNLSLDVLRGNDETIGFEDILNDPSQSEVMG--EPHLMVEYKLGL 140

[Close]

BLAST of Carg02184 vs. Swiss-Prot
Match: sp|Q9CQT5|POMP_MOUSE (Proteasome maturation protein OS=Mus musculus OX=10090 GN=Pomp PE=1 SV=1)

HSP 1 Score: 69.7 bits (169), Expect = 2.9e-11
Identity = 43/116 (37.07%), Postives = 66/116 (56.90%), Query Frame = 0


Query: 16  NDALRFGLQGVKSDLVGSHPVESIYETTRRTEEEMKRKILVNTYGSAFPLKMDFERQILS 75
           +D LR G   VK++L+ SHP+E   +  +  +++M    L N  G   PLK+  E + + 
Sbjct: 28  HDLLRKGFSCVKNELLPSHPLELSEKNFQLNQDKMNFSTLRNIQGLFAPLKLQMEFKAVQ 87

Query: 76  RFQRPLGPIPSSMLGLEALTGSLDDFGFEDYLNDPRESESLRPLDMHHGMEVRLGL 132
           +  R L  +PSS L L+ L G+ +  GFED LNDP +SE +   + H  +E +LGL
Sbjct: 88  QVHR-LPFLPSSNLSLDILRGNDETIGFEDILNDPSQSELMG--EPHVMVEHKLGL 140

[Close]

BLAST of Carg02184 vs. TrEMBL
Match: tr|A0A0A0KUK6|A0A0A0KUK6_CUCSA (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_5G643970 PE=4 SV=1)

HSP 1 Score: 280.8 bits (717), Expect = 1.7e-72
Identity = 134/141 (95.04%), Postives = 139/141 (98.58%), Query Frame = 0


Query: 1   MESSKAIPHEIGGIQNDALRFGLQGVKSDLVGSHPVESIYETTRRTEEEMKRKILVNTYG 60
           MESSKAIPHEIGGIQNDALRFGLQGVKSDLVGSHPVES+YETTRRT+EEMKRK+LVNTYG
Sbjct: 1   MESSKAIPHEIGGIQNDALRFGLQGVKSDLVGSHPVESLYETTRRTQEEMKRKVLVNTYG 60

Query: 61  SAFPLKMDFERQILSRFQRPLGPIPSSMLGLEALTGSLDDFGFEDYLNDPRESESLRPLD 120
           SAFPLKMD +RQILSRFQRP GPIPSSMLGLEALTGSLDDFGFEDYLNDPRESESLRPLD
Sbjct: 61  SAFPLKMDLDRQILSRFQRPPGPIPSSMLGLEALTGSLDDFGFEDYLNDPRESESLRPLD 120

Query: 121 MHHGMEVRLGLSKGPVCPSFI 142
           MHHGMEVRLGLSKGPVCPSF+
Sbjct: 121 MHHGMEVRLGLSKGPVCPSFM 141

[Close]

BLAST of Carg02184 vs. TrEMBL
Match: tr|A0A1S3CAQ6|A0A1S3CAQ6_CUCME (cyclin-B1-2 OS=Cucumis melo OX=3656 GN=LOC103498587 PE=4 SV=1)

HSP 1 Score: 280.0 bits (715), Expect = 2.9e-72
Identity = 134/141 (95.04%), Postives = 139/141 (98.58%), Query Frame = 0


Query: 1   MESSKAIPHEIGGIQNDALRFGLQGVKSDLVGSHPVESIYETTRRTEEEMKRKILVNTYG 60
           M+SSKAIPHEIGGIQNDALRFGLQGVKSDLVGSHPVES+YETTRRT+EEMKRKILVNTYG
Sbjct: 1   MDSSKAIPHEIGGIQNDALRFGLQGVKSDLVGSHPVESLYETTRRTQEEMKRKILVNTYG 60

Query: 61  SAFPLKMDFERQILSRFQRPLGPIPSSMLGLEALTGSLDDFGFEDYLNDPRESESLRPLD 120
           SAFPLKMD +RQILSRFQRP GPIPSSMLGLEALTGSLDDFGFEDYLNDPRESESLRPLD
Sbjct: 61  SAFPLKMDLDRQILSRFQRPPGPIPSSMLGLEALTGSLDDFGFEDYLNDPRESESLRPLD 120

Query: 121 MHHGMEVRLGLSKGPVCPSFI 142
           MHHGMEVRLGLSKGPVCPSF+
Sbjct: 121 MHHGMEVRLGLSKGPVCPSFM 141

[Close]

BLAST of Carg02184 vs. TrEMBL
Match: tr|A0A2P5F6U8|A0A2P5F6U8_9ROSA (Proteasome maturation factor UMP OS=Trema orientalis OX=63057 GN=TorRG33x02_107890 PE=4 SV=1)

HSP 1 Score: 253.4 bits (646), Expect = 2.9e-64
Identity = 117/141 (82.98%), Postives = 130/141 (92.20%), Query Frame = 0


Query: 1   MESSKAIPHEIGGIQNDALRFGLQGVKSDLVGSHPVESIYETTRRTEEEMKRKILVNTYG 60
           ME+ K I HEIGG+QNDALRFGL GVKSD+VGSHP+ES +++TRRT+EEMKRK+L NTYG
Sbjct: 1   MEAPKTIAHEIGGVQNDALRFGLNGVKSDIVGSHPLESAFQSTRRTQEEMKRKVLANTYG 60

Query: 61  SAFPLKMDFERQILSRFQRPLGPIPSSMLGLEALTGSLDDFGFEDYLNDPRESESLRPLD 120
            AFPLKMD +RQILSRFQRP G IPSSMLGLEA+TG+LDDFGFEDYLNDPRESE+ RPLD
Sbjct: 61  GAFPLKMDLDRQILSRFQRPPGTIPSSMLGLEAVTGTLDDFGFEDYLNDPRESETFRPLD 120

Query: 121 MHHGMEVRLGLSKGPVCPSFI 142
           MHHGMEVRLGLSKGPVCPSFI
Sbjct: 121 MHHGMEVRLGLSKGPVCPSFI 141

[Close]

BLAST of Carg02184 vs. TrEMBL
Match: tr|A0A2P2KWT9|A0A2P2KWT9_RHIMU (Uncharacterized protein OS=Rhizophora mucronata OX=61149 PE=4 SV=1)

HSP 1 Score: 251.9 bits (642), Expect = 8.4e-64
Identity = 118/141 (83.69%), Postives = 127/141 (90.07%), Query Frame = 0


Query: 1   MESSKAIPHEIGGIQNDALRFGLQGVKSDLVGSHPVESIYETTRRTEEEMKRKILVNTYG 60
           ME+ K I HEIGGIQNDALRFGL GVKSDL+ SHP+ES Y +TR+ EEEM+RKIL NTYG
Sbjct: 1   MEAPKTIAHEIGGIQNDALRFGLHGVKSDLLSSHPLESAYHSTRKNEEEMRRKILANTYG 60

Query: 61  SAFPLKMDFERQILSRFQRPLGPIPSSMLGLEALTGSLDDFGFEDYLNDPRESESLRPLD 120
           SAFPLKMD +RQILSRFQRP GP+PSSMLGLEALTGSLDDFGFEDYLNDPRESE+ RP D
Sbjct: 61  SAFPLKMDLDRQILSRFQRPPGPVPSSMLGLEALTGSLDDFGFEDYLNDPRESETFRPAD 120

Query: 121 MHHGMEVRLGLSKGPVCPSFI 142
           MHHGMEV LGLSKGPVCPSFI
Sbjct: 121 MHHGMEVHLGLSKGPVCPSFI 141

[Close]

BLAST of Carg02184 vs. TrEMBL
Match: tr|A0A2I4E7V8|A0A2I4E7V8_9ROSI (cyclin-B1-2-like OS=Juglans regia OX=51240 GN=LOC108987077 PE=4 SV=1)

HSP 1 Score: 248.4 bits (633), Expect = 9.3e-63
Identity = 115/141 (81.56%), Postives = 129/141 (91.49%), Query Frame = 0


Query: 1   MESSKAIPHEIGGIQNDALRFGLQGVKSDLVGSHPVESIYETTRRTEEEMKRKILVNTYG 60
           ME++K I HEIGGIQNDALRFGL GVKSD+VGSHP+ES Y++ R T+EEMKRK L+NTYG
Sbjct: 1   MEATKTIAHEIGGIQNDALRFGLHGVKSDIVGSHPLESAYQSARSTQEEMKRKFLMNTYG 60

Query: 61  SAFPLKMDFERQILSRFQRPLGPIPSSMLGLEALTGSLDDFGFEDYLNDPRESESLRPLD 120
           SAFPLK+D ++QILSRFQRP G IPSSMLGLEA+TG LDDFGFEDYLNDPR+SE+ RPLD
Sbjct: 61  SAFPLKLDLDKQILSRFQRPPGVIPSSMLGLEAVTGGLDDFGFEDYLNDPRDSETFRPLD 120

Query: 121 MHHGMEVRLGLSKGPVCPSFI 142
           MHHGMEVRLGLSKGPVCPSFI
Sbjct: 121 MHHGMEVRLGLSKGPVCPSFI 141

The following BLAST results are available for this feature:

BLAST of Carg02184 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_022939098.1	2.1e-74	99.29	cyclin-B1-2-like [Cucurbita moschata] >XP_023550448.1 cyclin-B1-2-like [Cucurbit...	[more]
XP_022993234.1	5.2e-73	97.87	cyclin-B1-2-like [Cucurbita maxima]	[more]
XP_004141496.1	2.6e-72	95.04	PREDICTED: cyclin-B1-2 [Cucumis sativus] >KGN52569.1 hypothetical protein Csa_5G...	[more]
XP_008459455.1	4.4e-72	95.04	PREDICTED: cyclin-B1-2 [Cucumis melo]	[more]
XP_022956483.1	6.3e-71	94.33	cyclin-B1-2-like [Cucurbita moschata]	[more]

BLAST of Carg02184 vs. TAIR10


Match Name	E-value	Identity	Description
AT5G38650.1	1.0e-59	72.34	Proteasome maturation factor UMP1	[more]
AT1G67250.1	2.6e-58	68.79	Proteasome maturation factor UMP1	[more]
AT1G62920.1	6.4e-09	45.07	Proteasome maturation factor UMP1 (InterPro:IPR008012)	[more]

BLAST of Carg02184 vs. Swiss-Prot


Match Name	E-value	Identity	Description
sp\|Q0DWQ7\|CCB12_ORYSJ	4.8e-22	50.43	Cyclin-B1-2 OS=Oryza sativa subsp. japonica OX=39947 GN=CYCB1-2 PE=3 SV=1	[more]
sp\|Q55G18\|POMP_DICDI	1.4e-13	41.44	Proteasome maturation protein homolog OS=Dictyostelium discoideum OX=44689 GN=po...	[more]
sp\|Q3SZV5\|POMP_BOVIN	4.5e-12	37.93	Proteasome maturation protein OS=Bos taurus OX=9913 GN=POMP PE=2 SV=1	[more]
sp\|Q9Y244\|POMP_HUMAN	2.9e-11	37.07	Proteasome maturation protein OS=Homo sapiens OX=9606 GN=POMP PE=1 SV=1	[more]
sp\|Q9CQT5\|POMP_MOUSE	2.9e-11	37.07	Proteasome maturation protein OS=Mus musculus OX=10090 GN=Pomp PE=1 SV=1	[more]

BLAST of Carg02184 vs. TrEMBL


Match Name	E-value	Identity	Description
tr\|A0A0A0KUK6\|A0A0A0KUK6_CUCSA	1.7e-72	95.04	Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_5G643970 PE=4 SV=1	[more]
tr\|A0A1S3CAQ6\|A0A1S3CAQ6_CUCME	2.9e-72	95.04	cyclin-B1-2 OS=Cucumis melo OX=3656 GN=LOC103498587 PE=4 SV=1	[more]
tr\|A0A2P5F6U8\|A0A2P5F6U8_9ROSA	2.9e-64	82.98	Proteasome maturation factor UMP OS=Trema orientalis OX=63057 GN=TorRG33x02_1078...	[more]
tr\|A0A2P2KWT9\|A0A2P2KWT9_RHIMU	8.4e-64	83.69	Uncharacterized protein OS=Rhizophora mucronata OX=61149 PE=4 SV=1	[more]
tr\|A0A2I4E7V8\|A0A2I4E7V8_9ROSI	9.3e-63	81.56	cyclin-B1-2-like OS=Juglans regia OX=51240 GN=LOC108987077 PE=4 SV=1	[more]

Annotated Terms

The following terms have been associated with this gene:

Vocabulary: **Biological Process**
Term	Definition
GO:0043248	proteasome assembly

Vocabulary: **INTERPRO**
Term	Definition
IPR008012	Ump1

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0043248	proteasome assembly
cellular_component	GO:0005575	cellular_component
molecular_function	GO:0003674	molecular_function

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
Carg02184-RA	Carg02184-RA	mRNA

InterPro

Analysis Name: InterPro Annotations of silver-seed gourd
Date Performed: 2019-03-07


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
None	No IPR available	PFAM	PF05348	UMP1	coord: 15..129 e-value: 1.3E-33 score: 115.7
IPR008012	Proteasome maturation factor Ump1	PANTHER	PTHR12828	PROTEASOME MATURATION PROTEIN UMP1	coord: 9..131

Synteny

The following gene(s) are orthologous to this gene:


Gene	Orthologue	Organism	Block
Carg02184	Cla016458	Watermelon (97103) v1	carwmB0260
Carg02184	Csa5G643970	Cucumber (Chinese Long) v2	carcuB0293
Carg02184	MELO3C022086	Melon (DHL92) v3.5.1	carmeB0260
Carg02184	ClCG11G005320	Watermelon (Charleston Gray)	carwcgB0255
Carg02184	CSPI05G29970	Wild cucumber (PI 183967)	carcpiB0297
Carg02184	Cucsa.238150	Cucumber (Gy14) v1	carcgyB0316
Carg02184	CmaCh04G028440	Cucurbita maxima (Rimu)	carcmaB0374
Carg02184	CmoCh15G002050	Cucurbita moschata (Rifu)	carcmoB0362
Carg02184	CmoCh04G029730	Cucurbita moschata (Rifu)	carcmoB0370
Carg02184	Lsi03G002260	Bottle gourd (USVL1VR-Ls)	carlsiB236
Carg02184	Cp4.1LG01g22160	Cucurbita pepo (Zucchini)	carcpeB0374
Carg02184	Cp4.1LG13g07830	Cucurbita pepo (Zucchini)	carcpeB0366
Carg02184	CsGy5G029370	Cucumber (Gy14) v2	carcgybB0280
Carg02184	MELO3C022086.2	Melon (DHL92) v3.6.1	carmedB0270
Carg02184	CsaV3_5G039100	Cucumber (Chinese Long) v3	carcucB0296
Carg02184	Cla97C11G212240	Watermelon (97103) v2	carwmbB0269
Carg02184	Bhi06G000072	Wax gourd	carwgoB0342

The following gene(s) are paralogous to this gene:


Gene	Paralogue	Organism	Block
Carg02184	Carg05920	Silver-seed gourd	carcarB020

The following block(s) are covering this gene:


Gene	Organism	Block
Carg02184	Watermelon (97103) v2	carwmbB0274
Carg02184	Wax gourd	carwgoB0339
Carg02184	Wax gourd	carwgoB0353
Carg02184	Cucurbita maxima (Rimu)	carcmaB0362
Carg02184	Cucurbita maxima (Rimu)	carcmaB0365
Carg02184	Melon (DHL92) v3.5.1	carmeB0262
Carg02184	Melon (DHL92) v3.6.1	carmedB0273