CsGy5G026910 (gene) Cucumber (Gy14) v2 | Cucurbit Genomics Database (CuGenDB)

Overview


Name	CsGy5G026910
Type	gene
Organism	Cucumis sativus (Cucumber (Gy14) v2)
Description	E3 ubiquitin-protein ligase
Location	Chr5 : 30667178 .. 30672096 (+)

Genome Viewer

Gene Expression

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonfive_prime_UTRCDSthree_prime_UTR

Hold the cursor over a type above to highlight its positions in the sequence below.

TCTTCCCCGGCTCCTACTCTTCCCCCCCCCCCCCCCCCCCCCCCCTCTCTCTCTCTTAGCCTTTAATTTGAATTCTCTCCGCTCTCAAACGCTCACTTCTTCACATTTCTCTCTGTACTACCTCTTTTACTTGCTGTTTATTGTTTTATCACAAACCGAAGTTGTCGTTTACTCAGATTTCTTTGGTGGGGTTCTCGTCCTCTTTTGAGGTATTTCATGTTTTCTTTGATTTTTTCTCTTCATGGGGTTTGGGTTGTTGTGATTTGGGTTTCTTGTTGATGGGTCTTTTTTCTCTTCTTTCTGGGTTGTGTTCGTTTTTGAATGTCATAATCTGCATTCAGTTTTTGGGTTGTCTCAATGTCACTCTGGATGTTTCTGGTTCTTTGATTGCTTTACTCTGCGCATTTGTTTTTGTTTTTGTTGTTGTTCAATAGGCCTCAATTTTTCTTTAGTTAAATTTTTGTTTGGTGTTCTGGGTTTAGAAAGGTTGTTAGTATCCATGATAAAGTTGGATATGAGTTTCTACACGGTTTAGTTTTTCCTTTATGGTAATTAAATTGATTCCATTGGAGGGTTTAGTGCAAAATGTGTTTGCTGTTTTGTCTTTTCATTCGTTCCATTGGTTTTCAGTTTTCACTCTCATGAATTTGAACTTTTGGTGGTATTTCATGCACTGCTCAAGAATGACGAGATATATCCTGCACTTACTCTTTTTCTCCTTTGGGTGTTCTGGTTTTTTGCTAGTAATCTTTTGGATCACTGAACAGGATATTGGATTATGACTTAAGATGCTCTCTTTTTCTTTTAGTCAAGCATCTTTTGTGTTAGTTGACATATATTTATTTACCAATTCATTATTGGAGGAAACAAGATGGTTCTCAAAAATAAAAGCTTGGCAGAGTTCTTTTAAAGTTTTTTTTTTTTTTTTTGGGTTTCCCTTTTGGCCACCCGTTTTAATTATTGCAATTTGCAATTTGCAATTTGCGAGATGTTAACGAAAGTAGTTCTTATCCCTTTTTTTGTGATAGTGGGTGCTTCCTAGATCCTTATAGACTAGTTTTTTTGCCAGTCTTATTTTTGCACAATTTGGCTTGAAAGAAATAGGACTTTCATAAGTGCTTTTGAAGTTTTCTTGTAAGTTGTAACTATAATTCATCATATTACTTTTGGACGCTCCTCCCCTTACGTTCCATGTTGGTCTGTGTACTTTTAATATCCTGATTCCTGCCTGTACTTTGATTCTTCTTAAAGTAAGCCACTCTTTTATAACCAGCTGTTTATCTAAATTGGTGAAAACACCCTTCTCTAGAAATATTTGTGGTTTTGACGTGTCCCTTTAGAGAAGTGTATGGATATGCTAGGGTCTTCACCTCATACTGAAAGCCCCTAGAGCTTTACCAGAACCTGTCGTAATATAAACACTCTTCTCGAGAAGGATTTCTGGATTTTGACATGTCTCTCGAGAGAAGTGTCATTCTAAAAGCCAGATTTGCTTTAGATGACAGGCTATCCGAATGTGAAAGATTTTTTATGGTCAAGATTGGTTCTTGTGAAATACCCTTTTGTAGAAAGATTATATACTGGGTTTTCCTTGGGATTTATATACTGGTTTTTGACAATAGCAGCCTAGTTAGTTTCTGTAGAGATGTTTGGAGTAATGACTGGTTTTTGTAAATGGAAGGGAATTTGACAGAGGGAGGTGGGAAAGTTGGTTTAGTATCTTGGATATCCTAACCCTAAGAAAGAACTTCTGGCAAGGGAATCCTTGTTTCTATGCACTCTAGTGTCACTGTAATATCTAATCTCCACCACGAGAATCCAGGGGTTTCTTTTGCCCCATCAGTTTTCCCTATGCTATCTAAAGAATCGAGGATGTGGAGCATTTGCTTTTTGTGTTTTGTGGTTAAATTATCCGTTTTGTCTTCCCTGGTGTTTTTCTAGGGTATTGAAATTCTAGAAAGCTCTCCAAGTACACTGCTTTTTTATTTTGACAAACGAGAGAGCTTTCGTCTAATTTTATTTCCTTTTTAAAAGGTCCTACTTACTTAATTCTCACTTACGTTATTAATACTTGCAAGTTCTTTTTCATACTTTTTCTAACTCGGGTTTATGCATGTAGGCATTCTATTCATAAAAATGACATCTGCAAATCCTTATTTTGATGACATCCGGAACAAACCTGAGGTTATTGATCCTCCCCAAGATGATGACATGATGGATGTTAGTGAAAGTGTGAGTGATCCTGCTCGATCTGGAGGAAAACCTAACGTAGTCTCTAGCAGTGTTCGTGAGCTGTTGGAGTGCCCTGTTTGCTTAAATGCTATGTACCCTCCCATTCATCAGGTTTGTTATCATCCTTTTAAGATCTTTTGAATGAAATTGATTTGTTGCTGGAGAGGGCCTGGGTGAAGGGTTTAGGTGGTGTCAATCATGAACTAATGGAGTTGGTGGTGATGTTAGTTATGGAAAAGGTTTTGGTGGTGGGTTGGAAAGATTTAGGTTTTGGGAGGTGGATTTGGTGCAGGGGCTTCTGGTGGAGGCGGAAGTGGCCATCCTAAACTTTGAAAAATCTCATTAATTATACCTTGTTATTATCTTCTCATGAAACTATACCTATACTCATGGTTGTGGAAGAGACTACAGTATCTGTCAAGAGAATAATACAAAACAAAATCGAAGTGGAAGATGAGAAGTCAGCTCACTCTAAACCTCCAATTGACTTGAATTAAAAGAACTGTATAGTTAAATTGGATACTGATTCCAAATAAGTATTATTATCCTCAATCTCCAAACAACTACCGAACTCTCTTCAAAGAACCCATGAACAATGATCTTTATCATTCCACAGGTGACGTAGAATTCCTAATTTGTCCACACGATATTGGCCTTAGACTTAAAGGCATCTCTGGAAGGCACAAATTTGAGCAAACATATTCTGCACTTTAACCAACAACTAACTATTCCAAAAAAAAAAAAAAAGGTTAACCAACAACTAGAAGCCATTCCATATCTTGGATGATAGACTATGTTGGCTCTGTTTCTATACGTAATACACCCCCTTCCATTGGATTAGTATAGCAGGTTAATGAAAAATCTTACTTAAGATATTTGTGCTTTGTGTGGATGTAGTCGTCTCCTTGCTCAGATTCTTCGTTTATGCGATAAAAAAACAGACGAACAACTTAATCTGGTTATCAACTAATTTGGAGGTAGAGATCTATTTTTCTCTATAACCTTGACCAAGTGTTCTTCTTGAGTTTATGTGAGAGTTCTGGATTTTCCCCTATATTATTGAGAATACCCATTTATTTCTGGTATATATGACAATTATTTTTGTATCTTGTATTCTTATGTCAATTAACATTCTATTGTTGCAGTGTTCGAATGGTCACACATTGTGTTCCGGTTGCAAGCCTAGGGTGCACAACCGGTGTCCGACCTGCAGGCATGAACTTGGCAATATCAGATGTCTTGCATTAGAGAAGGTGGCTGCATCTCTGGAACTTCCATGTAAATACCAAACTTTTGGATGTGTGGGCATATATCCATACTATAGCAAGCTGAAACATGAATCTCAGTGTATATATCGACCCTATAACTGTCCGTATGCGGGTTCGGAATGCTCAGTTATTGGCGACATTCCATTTTTGGTATCCCACCTCAAGGATGATCACAAAGTTGACATGCATAATGGAAGCACTTTCAATCACCGATATGTCAAGTCAAACCCACAAGAGGTCGAAAATGCCACCTGGATGTTAACGGTACCATTCTGTTTGTCTTATTTTATCATGTTCCATTTTGTTTGGCCCGTTGAATCTTGATCAACGCAAGTTTTATTTTTGATGAAAGAGCCTTTTTTTTCTTTTTGAAAAAGATAGAAAAGGCTTATGAGTTGAGAATAAACAGACTGACAATGAACATGTCCTCTTTTATTAGATAGGGATCAGATCAAGTTTATAGCGTTGCTATCACTTAAAGAAAGGACAATAAAATTATTTTTGTTTTTTAACAGTTTGGGGACTGGAAGCTGAACTGCCTTTTGGTTCCCCCGAAACAACTTTCGTTTTGTGAACCCATTTTAAAAAATGAACTCGAAAAAAAATTATAAAGTGGATCAAGAAGCCTTTTCTTTTTAATTCTTAAGAACAAACTTGTTTATATTCAGAATAACAGAACTGATACCCTTTTTCGTTTGATTTCTAGGTTTTCAGCTGTTTTGGTCAATACTTTTGTTTACATTTCGAAGCTTTCCAGCTCGGAATGGCACCCGTCTACATAGCTTTCTTGCGGTTTATGGGCGACGATAATGAAGCAAAGAACTATAGTTATAGTCTTGAGGTTGGTGGAAATGGGAGGAAGATGGTGTGGCAAGGAGTGCCACGGAGTATTCGGGACAGTCATCGGAAGGTCCGAGACAGTTTTGACGGTCTCATTATCCAACGTAATATGGCACTCTTCTTCTCGGGGGGAGATCGGAAAGAATTGAAACTCAGGGTAACTGGTAGGATTTGGAAGGAGCAGTAATGGTCTGTTTCCAATCACCATTTTTTAAAAAAATGTTCTATGTTTAGCTCCTTACTCCTAAGAGAATGTAAAAGTAGGCTAATTAGAGAGTTGTGATATGATGATAGGTCTCCAGTAATGTAATGTAGTTATTTTATTTTTTTAGTTGAAGAATCAAAGGCAAACTCTGTTTGCTTGTGGAAAATCAAATACATGAATGAACTGTGACAGCAAAAACCTGTGTTCTTACTTCTTCACTGTTGCAAGAGAGAAAGGTGTTCCATTGTTCATCTCTTTATTTATTTATTTCACTTTTTGCCCCTCACAATACTTGAAATAACATTTGTAGGTCCAGCAGTTATTTTAAATGAAGAAAATGAAACTGGATGTCAATTTTAATCATCAGTTAATAA

mRNA sequence

TCTTCCCCGGCTCCTACTCTTCCCCCCCCCCCCCCCCCCCCCCCCTCTCTCTCTCTTAGCCTTTAATTTGAATTCTCTCCGCTCTCAAACGCTCACTTCTTCACATTTCTCTCTGTACTACCTCTTTTACTTGCTGTTTATTGTTTTATCACAAACCGAAGTTGTCGTTTACTCAGATTTCTTTGGTGGGGTTCTCGTCCTCTTTTGAGGCATTCTATTCATAAAAATGACATCTGCAAATCCTTATTTTGATGACATCCGGAACAAACCTGAGGTTATTGATCCTCCCCAAGATGATGACATGATGGATGTTAGTGAAAGTGTGAGTGATCCTGCTCGATCTGGAGGAAAACCTAACGTAGTCTCTAGCAGTGTTCGTGAGCTGTTGGAGTGCCCTGTTTGCTTAAATGCTATGTACCCTCCCATTCATCAGTGTTCGAATGGTCACACATTGTGTTCCGGTTGCAAGCCTAGGGTGCACAACCGGTGTCCGACCTGCAGGCATGAACTTGGCAATATCAGATGTCTTGCATTAGAGAAGGTGGCTGCATCTCTGGAACTTCCATGTAAATACCAAACTTTTGGATGTGTGGGCATATATCCATACTATAGCAAGCTGAAACATGAATCTCAGTGTATATATCGACCCTATAACTGTCCGTATGCGGGTTCGGAATGCTCAGTTATTGGCGACATTCCATTTTTGGTATCCCACCTCAAGGATGATCACAAAGTTGACATGCATAATGGAAGCACTTTCAATCACCGATATGTCAAGTCAAACCCACAAGAGGTCGAAAATGCCACCTGGATGTTAACGGTTTTCAGCTGTTTTGGTCAATACTTTTGTTTACATTTCGAAGCTTTCCAGCTCGGAATGGCACCCGTCTACATAGCTTTCTTGCGGTTTATGGGCGACGATAATGAAGCAAAGAACTATAGTTATAGTCTTGAGGTTGGTGGAAATGGGAGGAAGATGGTGTGGCAAGGAGTGCCACGGAGTATTCGGGACAGTCATCGGAAGGTCCGAGACAGTTTTGACGGTCTCATTATCCAACGTAATATGGCACTCTTCTTCTCGGGGGGAGATCGGAAAGAATTGAAACTCAGGGTAACTGGTAGGATTTGGAAGGAGCAGTAATGGTCTGTTTCCAATCACCATTTTTTAAAAAAATGTTCTATGTTTAGCTCCTTACTCCTAAGAGAATGTAAAAGTAGGCTAATTAGAGAGTTGTGATATGATGATAGGTCTCCAGTAATGTAATGTAGTTATTTTATTTTTTTAGTTGAAGAATCAAAGGCAAACTCTGTTTGCTTGTGGAAAATCAAATACATGAATGAACTGTGACAGCAAAAACCTGTGTTCTTACTTCTTCACTGTTGCAAGAGAGAAAGGTGTTCCATTGTTCATCTCTTTATTTATTTATTTCACTTTTTGCCCCTCACAATACTTGAAATAACATTTGTAGGTCCAGCAGTTATTTTAAATGAAGAAAATGAAACTGGATGTCAATTTTAATCATCAGTTAATAA

Coding sequence (CDS)

ATGACATCTGCAAATCCTTATTTTGATGACATCCGGAACAAACCTGAGGTTATTGATCCTCCCCAAGATGATGACATGATGGATGTTAGTGAAAGTGTGAGTGATCCTGCTCGATCTGGAGGAAAACCTAACGTAGTCTCTAGCAGTGTTCGTGAGCTGTTGGAGTGCCCTGTTTGCTTAAATGCTATGTACCCTCCCATTCATCAGTGTTCGAATGGTCACACATTGTGTTCCGGTTGCAAGCCTAGGGTGCACAACCGGTGTCCGACCTGCAGGCATGAACTTGGCAATATCAGATGTCTTGCATTAGAGAAGGTGGCTGCATCTCTGGAACTTCCATGTAAATACCAAACTTTTGGATGTGTGGGCATATATCCATACTATAGCAAGCTGAAACATGAATCTCAGTGTATATATCGACCCTATAACTGTCCGTATGCGGGTTCGGAATGCTCAGTTATTGGCGACATTCCATTTTTGGTATCCCACCTCAAGGATGATCACAAAGTTGACATGCATAATGGAAGCACTTTCAATCACCGATATGTCAAGTCAAACCCACAAGAGGTCGAAAATGCCACCTGGATGTTAACGGTTTTCAGCTGTTTTGGTCAATACTTTTGTTTACATTTCGAAGCTTTCCAGCTCGGAATGGCACCCGTCTACATAGCTTTCTTGCGGTTTATGGGCGACGATAATGAAGCAAAGAACTATAGTTATAGTCTTGAGGTTGGTGGAAATGGGAGGAAGATGGTGTGGCAAGGAGTGCCACGGAGTATTCGGGACAGTCATCGGAAGGTCCGAGACAGTTTTGACGGTCTCATTATCCAACGTAATATGGCACTCTTCTTCTCGGGGGGAGATCGGAAAGAATTGAAACTCAGGGTAACTGGTAGGATTTGGAAGGAGCAGTAA

Protein sequence

MTSANPYFDDIRNKPEVIDPPQDDDMMDVSESVSDPARSGGKPNVVSSSVRELLECPVCLNAMYPPIHQCSNGHTLCSGCKPRVHNRCPTCRHELGNIRCLALEKVAASLELPCKYQTFGCVGIYPYYSKLKHESQCIYRPYNCPYAGSECSVIGDIPFLVSHLKDDHKVDMHNGSTFNHRYVKSNPQEVENATWMLTVFSCFGQYFCLHFEAFQLGMAPVYIAFLRFMGDDNEAKNYSYSLEVGGNGRKMVWQGVPRSIRDSHRKVRDSFDGLIIQRNMALFFSGGDRKELKLRVTGRIWKEQ

Homology

[Close]

BLAST of CsGy5G026910 vs. NCBI nr
Match: XP_011655908.1 (PREDICTED: E3 ubiquitin-protein ligase SINAT5 [Cucumis sativus] >KGN52310.1 hypothetical protein Csa_5G623730 [Cucumis sativus])

HSP 1 Score: 649.8 bits (1675), Expect = 4.5e-183
Identity = 304/304 (100.00%), Postives = 304/304 (100.00%), Query Frame = 0


Query: 1   MTSANPYFDDIRNKPEVIDPPQDDDMMDVSESVSDPARSGGKPNVVSSSVRELLECPVCL 60
           MTSANPYFDDIRNKPEVIDPPQDDDMMDVSESVSDPARSGGKPNVVSSSVRELLECPVCL
Sbjct: 1   MTSANPYFDDIRNKPEVIDPPQDDDMMDVSESVSDPARSGGKPNVVSSSVRELLECPVCL 60

Query: 61  NAMYPPIHQCSNGHTLCSGCKPRVHNRCPTCRHELGNIRCLALEKVAASLELPCKYQTFG 120
           NAMYPPIHQCSNGHTLCSGCKPRVHNRCPTCRHELGNIRCLALEKVAASLELPCKYQTFG
Sbjct: 61  NAMYPPIHQCSNGHTLCSGCKPRVHNRCPTCRHELGNIRCLALEKVAASLELPCKYQTFG 120

Query: 121 CVGIYPYYSKLKHESQCIYRPYNCPYAGSECSVIGDIPFLVSHLKDDHKVDMHNGSTFNH 180
           CVGIYPYYSKLKHESQCIYRPYNCPYAGSECSVIGDIPFLVSHLKDDHKVDMHNGSTFNH
Sbjct: 121 CVGIYPYYSKLKHESQCIYRPYNCPYAGSECSVIGDIPFLVSHLKDDHKVDMHNGSTFNH 180

Query: 181 RYVKSNPQEVENATWMLTVFSCFGQYFCLHFEAFQLGMAPVYIAFLRFMGDDNEAKNYSY 240
           RYVKSNPQEVENATWMLTVFSCFGQYFCLHFEAFQLGMAPVYIAFLRFMGDDNEAKNYSY
Sbjct: 181 RYVKSNPQEVENATWMLTVFSCFGQYFCLHFEAFQLGMAPVYIAFLRFMGDDNEAKNYSY 240

Query: 241 SLEVGGNGRKMVWQGVPRSIRDSHRKVRDSFDGLIIQRNMALFFSGGDRKELKLRVTGRI 300
           SLEVGGNGRKMVWQGVPRSIRDSHRKVRDSFDGLIIQRNMALFFSGGDRKELKLRVTGRI
Sbjct: 241 SLEVGGNGRKMVWQGVPRSIRDSHRKVRDSFDGLIIQRNMALFFSGGDRKELKLRVTGRI 300

Query: 301 WKEQ 305
           WKEQ
Sbjct: 301 WKEQ 304

[Close]

BLAST of CsGy5G026910 vs. NCBI nr
Match: XP_008446940.1 (PREDICTED: E3 ubiquitin-protein ligase SINAT5-like [Cucumis melo] >XP_008446941.1 PREDICTED: E3 ubiquitin-protein ligase SINAT5-like [Cucumis melo] >ADN34198.1 ubiquitin ligase SINAT5 [Cucumis melo subsp. melo])

HSP 1 Score: 647.5 bits (1669), Expect = 2.2e-182
Identity = 302/304 (99.34%), Postives = 304/304 (100.00%), Query Frame = 0


Query: 1   MTSANPYFDDIRNKPEVIDPPQDDDMMDVSESVSDPARSGGKPNVVSSSVRELLECPVCL 60
           MTSANPYFDDIRNKPEVIDPPQDDDMMDVSESVSDPAR+GGKPNVVSSSVRELLECPVCL
Sbjct: 1   MTSANPYFDDIRNKPEVIDPPQDDDMMDVSESVSDPARAGGKPNVVSSSVRELLECPVCL 60

Query: 61  NAMYPPIHQCSNGHTLCSGCKPRVHNRCPTCRHELGNIRCLALEKVAASLELPCKYQTFG 120
           NAMYPPIHQCSNGHTLCSGCKPRVHNRCPTCRHELGNIRCLALEKVAASLELPCKYQTFG
Sbjct: 61  NAMYPPIHQCSNGHTLCSGCKPRVHNRCPTCRHELGNIRCLALEKVAASLELPCKYQTFG 120

Query: 121 CVGIYPYYSKLKHESQCIYRPYNCPYAGSECSVIGDIPFLVSHLKDDHKVDMHNGSTFNH 180
           CVGIYPYYSKLKHESQCIYRPYNCPYAGSECSVIGDIPFLV+HLKDDHKVDMHNGSTFNH
Sbjct: 121 CVGIYPYYSKLKHESQCIYRPYNCPYAGSECSVIGDIPFLVAHLKDDHKVDMHNGSTFNH 180

Query: 181 RYVKSNPQEVENATWMLTVFSCFGQYFCLHFEAFQLGMAPVYIAFLRFMGDDNEAKNYSY 240
           RYVKSNPQEVENATWMLTVFSCFGQYFCLHFEAFQLGMAPVYIAFLRFMGDDNEAKNYSY
Sbjct: 181 RYVKSNPQEVENATWMLTVFSCFGQYFCLHFEAFQLGMAPVYIAFLRFMGDDNEAKNYSY 240

Query: 241 SLEVGGNGRKMVWQGVPRSIRDSHRKVRDSFDGLIIQRNMALFFSGGDRKELKLRVTGRI 300
           SLEVGGNGRKMVWQGVPRSIRDSHRKVRDSFDGLIIQRNMALFFSGGDRKELKLRVTGRI
Sbjct: 241 SLEVGGNGRKMVWQGVPRSIRDSHRKVRDSFDGLIIQRNMALFFSGGDRKELKLRVTGRI 300

Query: 301 WKEQ 305
           WKEQ
Sbjct: 301 WKEQ 304

[Close]

BLAST of CsGy5G026910 vs. NCBI nr
Match: XP_023524871.1 (E3 ubiquitin-protein ligase DIS1 [Cucurbita pepo subsp. pepo] >XP_023524879.1 E3 ubiquitin-protein ligase DIS1 [Cucurbita pepo subsp. pepo])

HSP 1 Score: 634.4 bits (1635), Expect = 2.0e-178
Identity = 295/305 (96.72%), Postives = 302/305 (99.02%), Query Frame = 0


Query: 1   MTSANPYFDDIRNKPEVIDPPQDDDMMDVSESVSDPARSGGKPNV-VSSSVRELLECPVC 60
           M+SANPYFDD+R KPEVIDPPQDDDMMDVSESVSDPAR+GGKPNV VSSSVRELLECPVC
Sbjct: 1   MSSANPYFDDVRTKPEVIDPPQDDDMMDVSESVSDPARNGGKPNVAVSSSVRELLECPVC 60

Query: 61  LNAMYPPIHQCSNGHTLCSGCKPRVHNRCPTCRHELGNIRCLALEKVAASLELPCKYQTF 120
           LNAMYPPIHQCSNGHTLCSGCKPRVHNRCPTCRHELGNIRCLALEKVAASLELPCKYQTF
Sbjct: 61  LNAMYPPIHQCSNGHTLCSGCKPRVHNRCPTCRHELGNIRCLALEKVAASLELPCKYQTF 120

Query: 121 GCVGIYPYYSKLKHESQCIYRPYNCPYAGSECSVIGDIPFLVSHLKDDHKVDMHNGSTFN 180
           GCVGIYPYYSKLKHESQC+YRPYNCPYAGSEC+V+GDIPFLV+HLKDDHKVDMHNGSTFN
Sbjct: 121 GCVGIYPYYSKLKHESQCVYRPYNCPYAGSECTVVGDIPFLVAHLKDDHKVDMHNGSTFN 180

Query: 181 HRYVKSNPQEVENATWMLTVFSCFGQYFCLHFEAFQLGMAPVYIAFLRFMGDDNEAKNYS 240
           HRYVKSNPQEVENATWMLTVFSCFGQYFCLHFEAFQLGMAPVYIAFLRFMGDDNEAKNYS
Sbjct: 181 HRYVKSNPQEVENATWMLTVFSCFGQYFCLHFEAFQLGMAPVYIAFLRFMGDDNEAKNYS 240

Query: 241 YSLEVGGNGRKMVWQGVPRSIRDSHRKVRDSFDGLIIQRNMALFFSGGDRKELKLRVTGR 300
           YSLEVGGNGRK VWQGVPRSIRDSHRKVRDSFDGLIIQRNMALFFSGGDRKELKLRVTGR
Sbjct: 241 YSLEVGGNGRKTVWQGVPRSIRDSHRKVRDSFDGLIIQRNMALFFSGGDRKELKLRVTGR 300

Query: 301 IWKEQ 305
           IWKEQ
Sbjct: 301 IWKEQ 305

[Close]

BLAST of CsGy5G026910 vs. NCBI nr
Match: XP_022956691.1 (E3 ubiquitin-protein ligase DIS1 [Cucurbita moschata] >XP_022956692.1 E3 ubiquitin-protein ligase DIS1 [Cucurbita moschata])

HSP 1 Score: 631.7 bits (1628), Expect = 1.3e-177
Identity = 294/305 (96.39%), Postives = 301/305 (98.69%), Query Frame = 0


Query: 1   MTSANPYFDDIRNKPEVIDPPQDDDMMDVSESVSDPARSGGKPNV-VSSSVRELLECPVC 60
           M+SANPYFDD+R KPEVIDPPQDDDMMDVSESVSDPAR+GGKPNV VSSSVRELLECPVC
Sbjct: 1   MSSANPYFDDVRTKPEVIDPPQDDDMMDVSESVSDPARNGGKPNVAVSSSVRELLECPVC 60

Query: 61  LNAMYPPIHQCSNGHTLCSGCKPRVHNRCPTCRHELGNIRCLALEKVAASLELPCKYQTF 120
           LNAMYPPIHQCSNGHTLCSGCKPRVHNRCPTCRHELGNIRCLALEKVAASLELPCKY TF
Sbjct: 61  LNAMYPPIHQCSNGHTLCSGCKPRVHNRCPTCRHELGNIRCLALEKVAASLELPCKYLTF 120

Query: 121 GCVGIYPYYSKLKHESQCIYRPYNCPYAGSECSVIGDIPFLVSHLKDDHKVDMHNGSTFN 180
           GCVGIYPYYSKLKHESQC+YRPYNCPYAGSEC+V+GDIPFLV+HLKDDHKVDMHNGSTFN
Sbjct: 121 GCVGIYPYYSKLKHESQCVYRPYNCPYAGSECTVVGDIPFLVAHLKDDHKVDMHNGSTFN 180

Query: 181 HRYVKSNPQEVENATWMLTVFSCFGQYFCLHFEAFQLGMAPVYIAFLRFMGDDNEAKNYS 240
           HRYVKSNPQEVENATWMLTVFSCFGQYFCLHFEAFQLGMAPVYIAFLRFMGDDNEAKNYS
Sbjct: 181 HRYVKSNPQEVENATWMLTVFSCFGQYFCLHFEAFQLGMAPVYIAFLRFMGDDNEAKNYS 240

Query: 241 YSLEVGGNGRKMVWQGVPRSIRDSHRKVRDSFDGLIIQRNMALFFSGGDRKELKLRVTGR 300
           YSLEVGGNGRK VWQGVPRSIRDSHRKVRDSFDGLIIQRNMALFFSGGDRKELKLRVTGR
Sbjct: 241 YSLEVGGNGRKTVWQGVPRSIRDSHRKVRDSFDGLIIQRNMALFFSGGDRKELKLRVTGR 300

Query: 301 IWKEQ 305
           IWKEQ
Sbjct: 301 IWKEQ 305

[Close]

BLAST of CsGy5G026910 vs. NCBI nr
Match: XP_022992030.1 (E3 ubiquitin-protein ligase DIS1 [Cucurbita maxima])

HSP 1 Score: 631.7 bits (1628), Expect = 1.3e-177
Identity = 294/305 (96.39%), Postives = 301/305 (98.69%), Query Frame = 0


Query: 1   MTSANPYFDDIRNKPEVIDPPQDDDMMDVSESVSDPARSGGKPN-VVSSSVRELLECPVC 60
           M+SANPYFDD+R KPEVIDPPQDDDMMDVSESVSDPAR+GGKPN VVSSSVRELLECPVC
Sbjct: 1   MSSANPYFDDVRTKPEVIDPPQDDDMMDVSESVSDPARNGGKPNVVVSSSVRELLECPVC 60

Query: 61  LNAMYPPIHQCSNGHTLCSGCKPRVHNRCPTCRHELGNIRCLALEKVAASLELPCKYQTF 120
           LNAMYPPIHQCSNGHTLCSGCKPRVHNRCPTCRHELGNIRCLALEKVAASLELPCKYQTF
Sbjct: 61  LNAMYPPIHQCSNGHTLCSGCKPRVHNRCPTCRHELGNIRCLALEKVAASLELPCKYQTF 120

Query: 121 GCVGIYPYYSKLKHESQCIYRPYNCPYAGSECSVIGDIPFLVSHLKDDHKVDMHNGSTFN 180
           GCVGIYPYYSKLKHESQC+YRPYNCPYAGSEC+V+GDIPFLV+HLKDDHKVDMHNGSTFN
Sbjct: 121 GCVGIYPYYSKLKHESQCVYRPYNCPYAGSECTVVGDIPFLVAHLKDDHKVDMHNGSTFN 180

Query: 181 HRYVKSNPQEVENATWMLTVFSCFGQYFCLHFEAFQLGMAPVYIAFLRFMGDDNEAKNYS 240
           HRYVKSNPQEVENATWMLTVFSCFGQYFCLHFEAFQLGMAPVYIAFLRFMGDDNEAKNYS
Sbjct: 181 HRYVKSNPQEVENATWMLTVFSCFGQYFCLHFEAFQLGMAPVYIAFLRFMGDDNEAKNYS 240

Query: 241 YSLEVGGNGRKMVWQGVPRSIRDSHRKVRDSFDGLIIQRNMALFFSGGDRKELKLRVTGR 300
           YSLEVGGNGRK VWQGVPRSIRDSHRKVRDSFDGLIIQRNMALFFSGGD KELKLRVTGR
Sbjct: 241 YSLEVGGNGRKTVWQGVPRSIRDSHRKVRDSFDGLIIQRNMALFFSGGDGKELKLRVTGR 300

Query: 301 IWKEQ 305
           IWKEQ
Sbjct: 301 IWKEQ 305

[Close]

BLAST of CsGy5G026910 vs. TAIR10
Match: AT3G61790.1 (Protein with RING/U-box and TRAF-like domains)

HSP 1 Score: 481.9 bits (1239), Expect = 3.0e-136
Identity = 216/256 (84.38%), Postives = 236/256 (92.19%), Query Frame = 0


Query: 49  SVRELLECPVCLNAMYPPIHQCSNGHTLCSGCKPRVHNRCPTCRHELGNIRCLALEKVAA 108
           SV ELLECPVC N+MYPPIHQC NGHTLCS CK RVHNRCPTCR ELG+IRCLALEKVA 
Sbjct: 56  SVHELLECPVCTNSMYPPIHQCHNGHTLCSTCKARVHNRCPTCRQELGDIRCLALEKVAE 115

Query: 109 SLELPCKYQTFGCVGIYPYYSKLKHESQCIYRPYNCPYAGSECSVIGDIPFLVSHLKDDH 168
           SLELPCK+ + GC  I+PYYSKLKHE+ C +RPY+CPYAGSECSV GDIPFLV+HL+DDH
Sbjct: 116 SLELPCKHMSLGCPEIFPYYSKLKHETVCNFRPYSCPYAGSECSVTGDIPFLVAHLRDDH 175

Query: 169 KVDMHNGSTFNHRYVKSNPQEVENATWMLTVFSCFGQYFCLHFEAFQLGMAPVYIAFLRF 228
           KVDMH+G TFNHRYVKSNP+EVENATWMLTVF CFGQYFCLHFEAFQLGMAPVY+AFLRF
Sbjct: 176 KVDMHSGCTFNHRYVKSNPREVENATWMLTVFHCFGQYFCLHFEAFQLGMAPVYMAFLRF 235

Query: 229 MGDDNEAKNYSYSLEVGGNGRKMVWQGVPRSIRDSHRKVRDSFDGLIIQRNMALFFSGGD 288
           MGD+ EA+NY+YSLEVGG GRK++W+G PRS+RDSHRKVRDS DGLIIQRNMALFFSGGD
Sbjct: 236 MGDETEARNYNYSLEVGGYGRKLIWEGTPRSVRDSHRKVRDSHDGLIIQRNMALFFSGGD 295

Query: 289 RKELKLRVTGRIWKEQ 305
           RKELKLRVTGRIWKEQ
Sbjct: 296 RKELKLRVTGRIWKEQ 311

[Close]

BLAST of CsGy5G026910 vs. TAIR10
Match: AT4G27880.1 (Protein with RING/U-box and TRAF-like domains)

HSP 1 Score: 474.6 bits (1220), Expect = 4.7e-134
Identity = 213/258 (82.56%), Postives = 235/258 (91.09%), Query Frame = 0


Query: 47  SSSVRELLECPVCLNAMYPPIHQCSNGHTLCSGCKPRVHNRCPTCRHELGNIRCLALEKV 106
           ++SV ELLECPVC  +MYPPIHQC NGHTLCS CK RVHNRCPTCR ELG+IRCLALEKV
Sbjct: 55  ATSVYELLECPVCTYSMYPPIHQCHNGHTLCSTCKVRVHNRCPTCRQELGDIRCLALEKV 114

Query: 107 AASLELPCKYQTFGCVGIYPYYSKLKHESQCIYRPYNCPYAGSECSVIGDIPFLVSHLKD 166
           A SLELPCK+   GC  I+PYYSKLKHES C +RPY+CPYAGSEC ++GDIPFLV+HL+D
Sbjct: 115 AESLELPCKFYNLGCPEIFPYYSKLKHESLCNFRPYSCPYAGSECGIVGDIPFLVAHLRD 174

Query: 167 DHKVDMHNGSTFNHRYVKSNPQEVENATWMLTVFSCFGQYFCLHFEAFQLGMAPVYIAFL 226
           DHKVDMH GSTFNHRYVKSNP+EVENATWMLTVF CFGQYFCLHFEAFQLGM PVY+AFL
Sbjct: 175 DHKVDMHAGSTFNHRYVKSNPREVENATWMLTVFHCFGQYFCLHFEAFQLGMGPVYMAFL 234

Query: 227 RFMGDDNEAKNYSYSLEVGGNGRKMVWQGVPRSIRDSHRKVRDSFDGLIIQRNMALFFSG 286
           RFMGD+ +A++YSYSLEVGG+GRK+ W+G PRSIRDSHRKVRDS DGLIIQRNMALFFSG
Sbjct: 235 RFMGDEEDARSYSYSLEVGGSGRKLTWEGTPRSIRDSHRKVRDSNDGLIIQRNMALFFSG 294

Query: 287 GDRKELKLRVTGRIWKEQ 305
           GDRKELKLRVTG+IWKEQ
Sbjct: 295 GDRKELKLRVTGKIWKEQ 312

[Close]

BLAST of CsGy5G026910 vs. TAIR10
Match: AT3G58040.1 (seven in absentia of Arabidopsis 2)

HSP 1 Score: 464.2 bits (1193), Expect = 6.4e-131
Identity = 214/271 (78.97%), Postives = 236/271 (87.08%), Query Frame = 0


Query: 36  PARSG-GKPNVVSSS-VRELLECPVCLNAMYPPIHQCSNGHTLCSGCKPRVHNRCPTCRH 95
           P  +G GK  + S++ V ELLECPVC N MYPPIHQC NGHTLCS CK RV N CPTCR+
Sbjct: 38  PGSAGIGKYGIHSNNGVYELLECPVCTNLMYPPIHQCPNGHTLCSNCKLRVQNTCPTCRY 97

Query: 96  ELGNIRCLALEKVAASLELPCKYQTFGCVGIYPYYSKLKHESQCIYRPYNCPYAGSECSV 155
           ELGNIRCLALEKVA SLE+PC+YQ  GC  I+PYYSKLKHE  C +RPY CPYAGSECSV
Sbjct: 98  ELGNIRCLALEKVAESLEVPCRYQNLGCHDIFPYYSKLKHEQHCRFRPYTCPYAGSECSV 157

Query: 156 IGDIPFLVSHLKDDHKVDMHNGSTFNHRYVKSNPQEVENATWMLTVFSCFGQYFCLHFEA 215
            GDIP LV HLKDDHKVDMH+G TFNHRYVKSNP EVENATWMLTVF+CFG+ FCLHFEA
Sbjct: 158 TGDIPTLVVHLKDDHKVDMHDGCTFNHRYVKSNPHEVENATWMLTVFNCFGRQFCLHFEA 217

Query: 216 FQLGMAPVYIAFLRFMGDDNEAKNYSYSLEVGGNGRKMVWQGVPRSIRDSHRKVRDSFDG 275
           FQLGMAPVY+AFLRFMGD+NEAK +SYSLEVG +GRK+ WQG+PRSIRDSHRKVRDS DG
Sbjct: 218 FQLGMAPVYMAFLRFMGDENEAKKFSYSLEVGAHGRKLTWQGIPRSIRDSHRKVRDSQDG 277

Query: 276 LIIQRNMALFFSGGDRKELKLRVTGRIWKEQ 305
           LII RN+AL+FSGGDR+ELKLRVTGRIWKE+
Sbjct: 278 LIIPRNLALYFSGGDRQELKLRVTGRIWKEE 308

[Close]

BLAST of CsGy5G026910 vs. TAIR10
Match: AT2G41980.1 (Protein with RING/U-box and TRAF-like domains)

HSP 1 Score: 458.4 bits (1178), Expect = 3.5e-129
Identity = 213/278 (76.62%), Postives = 237/278 (85.25%), Query Frame = 0


Query: 31  ESVSDPARSG----GKPNVVSSSVRELLECPVCLNAMYPPIHQCSNGHTLCSGCKPRVHN 90
           E+ S P +SG    GK +  S+ V ELLECPVC N MYPPIHQC NGHTLCS CK RV N
Sbjct: 29  EANSKPTKSGSGSIGKFH-SSNGVYELLECPVCTNLMYPPIHQCPNGHTLCSSCKLRVQN 88

Query: 91  RCPTCRHELGNIRCLALEKVAASLELPCKYQTFGCVGIYPYYSKLKHESQCIYRPYNCPY 150
            CPTCR+ELGNIRCLALEKVA SLE+PC+YQ  GC  I+PYYSKLKHE  C +R Y+CPY
Sbjct: 89  TCPTCRYELGNIRCLALEKVAESLEVPCRYQNLGCQDIFPYYSKLKHEQHCRFRSYSCPY 148

Query: 151 AGSECSVIGDIPFLVSHLKDDHKVDMHNGSTFNHRYVKSNPQEVENATWMLTVFSCFGQY 210
           AGSECSV GDIP LV HLKDDHKVDMH+G TFNHRYVKSNP EVENATWMLTVF+CFG+ 
Sbjct: 149 AGSECSVTGDIPTLVDHLKDDHKVDMHDGCTFNHRYVKSNPHEVENATWMLTVFNCFGRQ 208

Query: 211 FCLHFEAFQLGMAPVYIAFLRFMGDDNEAKNYSYSLEVGGNGRKMVWQGVPRSIRDSHRK 270
           FCLHFEAFQLGMAPVY+AFLRFMGD+NEAK +SYSLEVG + RK+ WQG+PRSIRDSHRK
Sbjct: 209 FCLHFEAFQLGMAPVYMAFLRFMGDENEAKKFSYSLEVGAHSRKLTWQGIPRSIRDSHRK 268

Query: 271 VRDSFDGLIIQRNMALFFSGGDRKELKLRVTGRIWKEQ 305
           VRDS DGLII RN+AL+FSG D++ELKLRVTGRIWKE+
Sbjct: 269 VRDSQDGLIIPRNLALYFSGSDKEELKLRVTGRIWKEE 305

[Close]

BLAST of CsGy5G026910 vs. TAIR10
Match: AT5G53360.1 (TRAF-like superfamily protein)

HSP 1 Score: 368.2 bits (944), Expect = 4.8e-102
Identity = 164/204 (80.39%), Postives = 184/204 (90.20%), Query Frame = 0


Query: 101 LALEKVAASLELPCKYQTFGCVGIYPYYSKLKHESQCIYRPYNCPYAGSECSVIGDIPFL 160
           +ALEKVA SLELPCKY   GC+GI+PYYSKLKHESQC +RPY+CPYAGSEC+ +GDI FL
Sbjct: 15  IALEKVAESLELPCKYYNLGCLGIFPYYSKLKHESQCNFRPYSCPYAGSECAAVGDITFL 74

Query: 161 VSHLKDDHKVDMHNGSTFNHRYVKSNPQEVENATWMLTVFSCFGQYFCLHFEAFQLGMAP 220
           V+HL+DDHKVDMH G TFNHRYVKSNP+EVENATWMLTVF CFGQYFCLHFEAFQLGMAP
Sbjct: 75  VAHLRDDHKVDMHTGCTFNHRYVKSNPREVENATWMLTVFQCFGQYFCLHFEAFQLGMAP 134

Query: 221 VYIAFLRFMGDDNEAKNYSYSLEVGGNGRKMVWQGVPRSIRDSHRKVRDSFDGLIIQRNM 280
           VY+AFLRFMGD+++A+NY+YSLEVGG+GRK  W+G PRS+RDSH       DGLIIQRNM
Sbjct: 135 VYMAFLRFMGDEDDARNYTYSLEVGGSGRKQTWEGTPRSVRDSHXXXXXXXDGLIIQRNM 194

Query: 281 ALFFSGGDRKELKLRVTGRIWKEQ 305
           ALFFSGGD+KELKLRVTGRIWKEQ
Sbjct: 195 ALFFSGGDKKELKLRVTGRIWKEQ 218

[Close]

BLAST of CsGy5G026910 vs. Swiss-Prot
Match: sp|Q10L91|DIS1_ORYSJ (E3 ubiquitin-protein ligase DIS1 OS=Oryza sativa subsp. japonica OX=39947 GN=DIS1 PE=1 SV=1)

HSP 1 Score: 552.4 bits (1422), Expect = 3.2e-156
Identity = 261/299 (87.29%), Postives = 275/299 (91.97%), Query Frame = 0


Query: 7   YFDDIRNKPEVIDPPQDDDMMDVSESVSDPARSGGKPN-VVSSSVRELLECPVCLNAMYP 66
           Y DD  +  EVIDPP+  +++DV+E   DP     KPN VVSSSVRELLECPVCL+AMYP
Sbjct: 6   YIDD--SGSEVIDPPK-TEVLDVTELAGDPVPHSPKPNVVVSSSVRELLECPVCLSAMYP 65

Query: 67  PIHQCSNGHTLCSGCKPRVHNRCPTCRHELGNIRCLALEKVAASLELPCKYQTFGCVGIY 126
           PIHQCSNGHTLCSGCKPRVHNRCPTCRHELGNIRCLALEKVAASLELPCKYQ FGCVGIY
Sbjct: 66  PIHQCSNGHTLCSGCKPRVHNRCPTCRHELGNIRCLALEKVAASLELPCKYQNFGCVGIY 125

Query: 127 PYYSKLKHESQCIYRPYNCPYAGSECSVIGDIPFLVSHLKDDHKVDMHNGSTFNHRYVKS 186
           PYY KLKHESQC YRPY+CPYAGSEC+V GDIP+LV+HLKDDHKVDMHNG TFNHRYVKS
Sbjct: 126 PYYCKLKHESQCQYRPYSCPYAGSECTVAGDIPYLVNHLKDDHKVDMHNGCTFNHRYVKS 185

Query: 187 NPQEVENATWMLTVFSCFGQYFCLHFEAFQLGMAPVYIAFLRFMGDDNEAKNYSYSLEVG 246
           NP EVENATWMLTVFSCFGQYFCLHFEAFQLGMAPVYIAFLRFMGDD EAKNYSYSLEVG
Sbjct: 186 NPHEVENATWMLTVFSCFGQYFCLHFEAFQLGMAPVYIAFLRFMGDDLEAKNYSYSLEVG 245

Query: 247 GNGRKMVWQGVPRSIRDSHRKVRDSFDGLIIQRNMALFFSGGDRKELKLRVTGRIWKEQ 305
           G GRKM+WQGVPRSIRDSHRKVRDS+DGLIIQRNMALFFSGG+RKELKLRVTGRIWKEQ
Sbjct: 246 GTGRKMIWQGVPRSIRDSHRKVRDSYDGLIIQRNMALFFSGGERKELKLRVTGRIWKEQ 301

[Close]

BLAST of CsGy5G026910 vs. Swiss-Prot
Match: sp|Q84JL3|SINA3_ARATH (E3 ubiquitin-protein ligase SINAT3 OS=Arabidopsis thaliana OX=3702 GN=SINAT3 PE=1 SV=1)

HSP 1 Score: 481.9 bits (1239), Expect = 5.3e-135
Identity = 216/256 (84.38%), Postives = 236/256 (92.19%), Query Frame = 0


Query: 49  SVRELLECPVCLNAMYPPIHQCSNGHTLCSGCKPRVHNRCPTCRHELGNIRCLALEKVAA 108
           SV ELLECPVC N+MYPPIHQC NGHTLCS CK RVHNRCPTCR ELG+IRCLALEKVA 
Sbjct: 56  SVHELLECPVCTNSMYPPIHQCHNGHTLCSTCKARVHNRCPTCRQELGDIRCLALEKVAE 115

Query: 109 SLELPCKYQTFGCVGIYPYYSKLKHESQCIYRPYNCPYAGSECSVIGDIPFLVSHLKDDH 168
           SLELPCK+ + GC  I+PYYSKLKHE+ C +RPY+CPYAGSECSV GDIPFLV+HL+DDH
Sbjct: 116 SLELPCKHMSLGCPEIFPYYSKLKHETVCNFRPYSCPYAGSECSVTGDIPFLVAHLRDDH 175

Query: 169 KVDMHNGSTFNHRYVKSNPQEVENATWMLTVFSCFGQYFCLHFEAFQLGMAPVYIAFLRF 228
           KVDMH+G TFNHRYVKSNP+EVENATWMLTVF CFGQYFCLHFEAFQLGMAPVY+AFLRF
Sbjct: 176 KVDMHSGCTFNHRYVKSNPREVENATWMLTVFHCFGQYFCLHFEAFQLGMAPVYMAFLRF 235

Query: 229 MGDDNEAKNYSYSLEVGGNGRKMVWQGVPRSIRDSHRKVRDSFDGLIIQRNMALFFSGGD 288
           MGD+ EA+NY+YSLEVGG GRK++W+G PRS+RDSHRKVRDS DGLIIQRNMALFFSGGD
Sbjct: 236 MGDETEARNYNYSLEVGGYGRKLIWEGTPRSVRDSHRKVRDSHDGLIIQRNMALFFSGGD 295

Query: 289 RKELKLRVTGRIWKEQ 305
           RKELKLRVTGRIWKEQ
Sbjct: 296 RKELKLRVTGRIWKEQ 311

[Close]

BLAST of CsGy5G026910 vs. Swiss-Prot
Match: sp|Q8S3N1|SINA5_ARATH (E3 ubiquitin-protein ligase SINAT5 OS=Arabidopsis thaliana OX=3702 GN=SINAT5 PE=1 SV=2)

HSP 1 Score: 476.1 bits (1224), Expect = 2.9e-133
Identity = 219/289 (75.78%), Postives = 243/289 (84.08%), Query Frame = 0


Query: 18  IDPPQDDDMMDVSESVSDPARSGGKPNVVS--SSVRELLECPVCLNAMYPPIHQCSNGHT 77
           ID   DDD +      S     GG   V+S  +SV ELLECPVC N+MYPPIHQC NGHT
Sbjct: 6   IDSVIDDDEIHQKHQFSSTKSQGGATVVISPATSVYELLECPVCTNSMYPPIHQCHNGHT 65

Query: 78  LCSGCKPRVHNRCPTCRHELGNIRCLALEKVAASLELPCKYQTFGCVGIYPYYSKLKHES 137
           LCS CK RVHNRCPTCR ELG+IRCLALEKVA SLELPCKY   GC+GI+PYYSKLKHES
Sbjct: 66  LCSTCKSRVHNRCPTCRQELGDIRCLALEKVAESLELPCKYYNLGCLGIFPYYSKLKHES 125

Query: 138 QCIYRPYNCPYAGSECSVIGDIPFLVSHLKDDHKVDMHNGSTFNHRYVKSNPQEVENATW 197
           QC +RPY+CPYAGSEC+ +GDI FLV+HL+DDHKVDMH G TFNHRYVKSNP+EVENATW
Sbjct: 126 QCNFRPYSCPYAGSECAAVGDITFLVAHLRDDHKVDMHTGCTFNHRYVKSNPREVENATW 185

Query: 198 MLTVFSCFGQYFCLHFEAFQLGMAPVYIAFLRFMGDDNEAKNYSYSLEVGGNGRKMVWQG 257
           MLTVF CFGQYFCLHFEAFQLGMAPVY+AFLRFMGD+++A+NY+YSLEVGG+GRK  W+G
Sbjct: 186 MLTVFQCFGQYFCLHFEAFQLGMAPVYMAFLRFMGDEDDARNYTYSLEVGGSGRKQTWEG 245

Query: 258 VPRSIRDSHRKVRDSFDGLIIQRNMALFFSGGDRKELKLRVTGRIWKEQ 305
            PRS+RDSH       DGLIIQRNMALFFSGGD+KELKLRVTGRIWKEQ
Sbjct: 246 TPRSVRDSHXXXXXXXDGLIIQRNMALFFSGGDKKELKLRVTGRIWKEQ 294

[Close]

BLAST of CsGy5G026910 vs. Swiss-Prot
Match: sp|Q9STN8|SINA4_ARATH (E3 ubiquitin-protein ligase SINAT4 OS=Arabidopsis thaliana OX=3702 GN=SINAT4 PE=1 SV=1)

HSP 1 Score: 474.6 bits (1220), Expect = 8.5e-133
Identity = 213/258 (82.56%), Postives = 235/258 (91.09%), Query Frame = 0


Query: 47  SSSVRELLECPVCLNAMYPPIHQCSNGHTLCSGCKPRVHNRCPTCRHELGNIRCLALEKV 106
           ++SV ELLECPVC  +MYPPIHQC NGHTLCS CK RVHNRCPTCR ELG+IRCLALEKV
Sbjct: 55  ATSVYELLECPVCTYSMYPPIHQCHNGHTLCSTCKVRVHNRCPTCRQELGDIRCLALEKV 114

Query: 107 AASLELPCKYQTFGCVGIYPYYSKLKHESQCIYRPYNCPYAGSECSVIGDIPFLVSHLKD 166
           A SLELPCK+   GC  I+PYYSKLKHES C +RPY+CPYAGSEC ++GDIPFLV+HL+D
Sbjct: 115 AESLELPCKFYNLGCPEIFPYYSKLKHESLCNFRPYSCPYAGSECGIVGDIPFLVAHLRD 174

Query: 167 DHKVDMHNGSTFNHRYVKSNPQEVENATWMLTVFSCFGQYFCLHFEAFQLGMAPVYIAFL 226
           DHKVDMH GSTFNHRYVKSNP+EVENATWMLTVF CFGQYFCLHFEAFQLGM PVY+AFL
Sbjct: 175 DHKVDMHAGSTFNHRYVKSNPREVENATWMLTVFHCFGQYFCLHFEAFQLGMGPVYMAFL 234

Query: 227 RFMGDDNEAKNYSYSLEVGGNGRKMVWQGVPRSIRDSHRKVRDSFDGLIIQRNMALFFSG 286
           RFMGD+ +A++YSYSLEVGG+GRK+ W+G PRSIRDSHRKVRDS DGLIIQRNMALFFSG
Sbjct: 235 RFMGDEEDARSYSYSLEVGGSGRKLTWEGTPRSIRDSHRKVRDSNDGLIIQRNMALFFSG 294

Query: 287 GDRKELKLRVTGRIWKEQ 305
           GDRKELKLRVTG+IWKEQ
Sbjct: 295 GDRKELKLRVTGKIWKEQ 312

[Close]

BLAST of CsGy5G026910 vs. Swiss-Prot
Match: sp|Q9M2P4|SINA2_ARATH (E3 ubiquitin-protein ligase SINAT2 OS=Arabidopsis thaliana OX=3702 GN=SINAT2 PE=1 SV=1)

HSP 1 Score: 464.2 bits (1193), Expect = 1.2e-129
Identity = 214/271 (78.97%), Postives = 236/271 (87.08%), Query Frame = 0


Query: 36  PARSG-GKPNVVSSS-VRELLECPVCLNAMYPPIHQCSNGHTLCSGCKPRVHNRCPTCRH 95
           P  +G GK  + S++ V ELLECPVC N MYPPIHQC NGHTLCS CK RV N CPTCR+
Sbjct: 38  PGSAGIGKYGIHSNNGVYELLECPVCTNLMYPPIHQCPNGHTLCSNCKLRVQNTCPTCRY 97

Query: 96  ELGNIRCLALEKVAASLELPCKYQTFGCVGIYPYYSKLKHESQCIYRPYNCPYAGSECSV 155
           ELGNIRCLALEKVA SLE+PC+YQ  GC  I+PYYSKLKHE  C +RPY CPYAGSECSV
Sbjct: 98  ELGNIRCLALEKVAESLEVPCRYQNLGCHDIFPYYSKLKHEQHCRFRPYTCPYAGSECSV 157

Query: 156 IGDIPFLVSHLKDDHKVDMHNGSTFNHRYVKSNPQEVENATWMLTVFSCFGQYFCLHFEA 215
            GDIP LV HLKDDHKVDMH+G TFNHRYVKSNP EVENATWMLTVF+CFG+ FCLHFEA
Sbjct: 158 TGDIPTLVVHLKDDHKVDMHDGCTFNHRYVKSNPHEVENATWMLTVFNCFGRQFCLHFEA 217

Query: 216 FQLGMAPVYIAFLRFMGDDNEAKNYSYSLEVGGNGRKMVWQGVPRSIRDSHRKVRDSFDG 275
           FQLGMAPVY+AFLRFMGD+NEAK +SYSLEVG +GRK+ WQG+PRSIRDSHRKVRDS DG
Sbjct: 218 FQLGMAPVYMAFLRFMGDENEAKKFSYSLEVGAHGRKLTWQGIPRSIRDSHRKVRDSQDG 277

Query: 276 LIIQRNMALFFSGGDRKELKLRVTGRIWKEQ 305
           LII RN+AL+FSGGDR+ELKLRVTGRIWKE+
Sbjct: 278 LIIPRNLALYFSGGDRQELKLRVTGRIWKEE 308

[Close]

BLAST of CsGy5G026910 vs. TrEMBL
Match: tr|A0A0A0KRN7|A0A0A0KRN7_CUCSA (E3 ubiquitin-protein ligase OS=Cucumis sativus OX=3659 GN=Csa_5G623730 PE=3 SV=1)

HSP 1 Score: 649.8 bits (1675), Expect = 3.0e-183
Identity = 304/304 (100.00%), Postives = 304/304 (100.00%), Query Frame = 0


Query: 1   MTSANPYFDDIRNKPEVIDPPQDDDMMDVSESVSDPARSGGKPNVVSSSVRELLECPVCL 60
           MTSANPYFDDIRNKPEVIDPPQDDDMMDVSESVSDPARSGGKPNVVSSSVRELLECPVCL
Sbjct: 1   MTSANPYFDDIRNKPEVIDPPQDDDMMDVSESVSDPARSGGKPNVVSSSVRELLECPVCL 60

Query: 61  NAMYPPIHQCSNGHTLCSGCKPRVHNRCPTCRHELGNIRCLALEKVAASLELPCKYQTFG 120
           NAMYPPIHQCSNGHTLCSGCKPRVHNRCPTCRHELGNIRCLALEKVAASLELPCKYQTFG
Sbjct: 61  NAMYPPIHQCSNGHTLCSGCKPRVHNRCPTCRHELGNIRCLALEKVAASLELPCKYQTFG 120

Query: 121 CVGIYPYYSKLKHESQCIYRPYNCPYAGSECSVIGDIPFLVSHLKDDHKVDMHNGSTFNH 180
           CVGIYPYYSKLKHESQCIYRPYNCPYAGSECSVIGDIPFLVSHLKDDHKVDMHNGSTFNH
Sbjct: 121 CVGIYPYYSKLKHESQCIYRPYNCPYAGSECSVIGDIPFLVSHLKDDHKVDMHNGSTFNH 180

Query: 181 RYVKSNPQEVENATWMLTVFSCFGQYFCLHFEAFQLGMAPVYIAFLRFMGDDNEAKNYSY 240
           RYVKSNPQEVENATWMLTVFSCFGQYFCLHFEAFQLGMAPVYIAFLRFMGDDNEAKNYSY
Sbjct: 181 RYVKSNPQEVENATWMLTVFSCFGQYFCLHFEAFQLGMAPVYIAFLRFMGDDNEAKNYSY 240

Query: 241 SLEVGGNGRKMVWQGVPRSIRDSHRKVRDSFDGLIIQRNMALFFSGGDRKELKLRVTGRI 300
           SLEVGGNGRKMVWQGVPRSIRDSHRKVRDSFDGLIIQRNMALFFSGGDRKELKLRVTGRI
Sbjct: 241 SLEVGGNGRKMVWQGVPRSIRDSHRKVRDSFDGLIIQRNMALFFSGGDRKELKLRVTGRI 300

Query: 301 WKEQ 305
           WKEQ
Sbjct: 301 WKEQ 304

[Close]

BLAST of CsGy5G026910 vs. TrEMBL
Match: tr|A0A1S3BGX1|A0A1S3BGX1_CUCME (E3 ubiquitin-protein ligase OS=Cucumis melo OX=3656 GN=LOC103489502 PE=3 SV=1)

HSP 1 Score: 647.5 bits (1669), Expect = 1.5e-182
Identity = 302/304 (99.34%), Postives = 304/304 (100.00%), Query Frame = 0


Query: 1   MTSANPYFDDIRNKPEVIDPPQDDDMMDVSESVSDPARSGGKPNVVSSSVRELLECPVCL 60
           MTSANPYFDDIRNKPEVIDPPQDDDMMDVSESVSDPAR+GGKPNVVSSSVRELLECPVCL
Sbjct: 1   MTSANPYFDDIRNKPEVIDPPQDDDMMDVSESVSDPARAGGKPNVVSSSVRELLECPVCL 60

Query: 61  NAMYPPIHQCSNGHTLCSGCKPRVHNRCPTCRHELGNIRCLALEKVAASLELPCKYQTFG 120
           NAMYPPIHQCSNGHTLCSGCKPRVHNRCPTCRHELGNIRCLALEKVAASLELPCKYQTFG
Sbjct: 61  NAMYPPIHQCSNGHTLCSGCKPRVHNRCPTCRHELGNIRCLALEKVAASLELPCKYQTFG 120

Query: 121 CVGIYPYYSKLKHESQCIYRPYNCPYAGSECSVIGDIPFLVSHLKDDHKVDMHNGSTFNH 180
           CVGIYPYYSKLKHESQCIYRPYNCPYAGSECSVIGDIPFLV+HLKDDHKVDMHNGSTFNH
Sbjct: 121 CVGIYPYYSKLKHESQCIYRPYNCPYAGSECSVIGDIPFLVAHLKDDHKVDMHNGSTFNH 180

Query: 181 RYVKSNPQEVENATWMLTVFSCFGQYFCLHFEAFQLGMAPVYIAFLRFMGDDNEAKNYSY 240
           RYVKSNPQEVENATWMLTVFSCFGQYFCLHFEAFQLGMAPVYIAFLRFMGDDNEAKNYSY
Sbjct: 181 RYVKSNPQEVENATWMLTVFSCFGQYFCLHFEAFQLGMAPVYIAFLRFMGDDNEAKNYSY 240

Query: 241 SLEVGGNGRKMVWQGVPRSIRDSHRKVRDSFDGLIIQRNMALFFSGGDRKELKLRVTGRI 300
           SLEVGGNGRKMVWQGVPRSIRDSHRKVRDSFDGLIIQRNMALFFSGGDRKELKLRVTGRI
Sbjct: 241 SLEVGGNGRKMVWQGVPRSIRDSHRKVRDSFDGLIIQRNMALFFSGGDRKELKLRVTGRI 300

Query: 301 WKEQ 305
           WKEQ
Sbjct: 301 WKEQ 304

[Close]

BLAST of CsGy5G026910 vs. TrEMBL
Match: tr|E5GCK0|E5GCK0_CUCME (E3 ubiquitin-protein ligase OS=Cucumis melo subsp. melo OX=412675 PE=3 SV=1)

HSP 1 Score: 647.5 bits (1669), Expect = 1.5e-182
Identity = 302/304 (99.34%), Postives = 304/304 (100.00%), Query Frame = 0


Query: 1   MTSANPYFDDIRNKPEVIDPPQDDDMMDVSESVSDPARSGGKPNVVSSSVRELLECPVCL 60
           MTSANPYFDDIRNKPEVIDPPQDDDMMDVSESVSDPAR+GGKPNVVSSSVRELLECPVCL
Sbjct: 1   MTSANPYFDDIRNKPEVIDPPQDDDMMDVSESVSDPARAGGKPNVVSSSVRELLECPVCL 60

Query: 61  NAMYPPIHQCSNGHTLCSGCKPRVHNRCPTCRHELGNIRCLALEKVAASLELPCKYQTFG 120
           NAMYPPIHQCSNGHTLCSGCKPRVHNRCPTCRHELGNIRCLALEKVAASLELPCKYQTFG
Sbjct: 61  NAMYPPIHQCSNGHTLCSGCKPRVHNRCPTCRHELGNIRCLALEKVAASLELPCKYQTFG 120

Query: 121 CVGIYPYYSKLKHESQCIYRPYNCPYAGSECSVIGDIPFLVSHLKDDHKVDMHNGSTFNH 180
           CVGIYPYYSKLKHESQCIYRPYNCPYAGSECSVIGDIPFLV+HLKDDHKVDMHNGSTFNH
Sbjct: 121 CVGIYPYYSKLKHESQCIYRPYNCPYAGSECSVIGDIPFLVAHLKDDHKVDMHNGSTFNH 180

Query: 181 RYVKSNPQEVENATWMLTVFSCFGQYFCLHFEAFQLGMAPVYIAFLRFMGDDNEAKNYSY 240
           RYVKSNPQEVENATWMLTVFSCFGQYFCLHFEAFQLGMAPVYIAFLRFMGDDNEAKNYSY
Sbjct: 181 RYVKSNPQEVENATWMLTVFSCFGQYFCLHFEAFQLGMAPVYIAFLRFMGDDNEAKNYSY 240

Query: 241 SLEVGGNGRKMVWQGVPRSIRDSHRKVRDSFDGLIIQRNMALFFSGGDRKELKLRVTGRI 300
           SLEVGGNGRKMVWQGVPRSIRDSHRKVRDSFDGLIIQRNMALFFSGGDRKELKLRVTGRI
Sbjct: 241 SLEVGGNGRKMVWQGVPRSIRDSHRKVRDSFDGLIIQRNMALFFSGGDRKELKLRVTGRI 300

Query: 301 WKEQ 305
           WKEQ
Sbjct: 301 WKEQ 304

[Close]

BLAST of CsGy5G026910 vs. TrEMBL
Match: tr|A0A067KWI1|A0A067KWI1_JATCU (E3 ubiquitin-protein ligase OS=Jatropha curcas OX=180498 GN=JCGZ_24516 PE=3 SV=1)

HSP 1 Score: 612.5 bits (1578), Expect = 5.3e-172
Identity = 283/305 (92.79%), Postives = 298/305 (97.70%), Query Frame = 0


Query: 1   MTSANPYFDDIRNKPEVIDPPQDDDMMDVSESVSDPARSGGKPNV-VSSSVRELLECPVC 60
           M S NP+F+D+R+KPEVIDPPQ++DMMDVSESV+DPA+   KPNV VSSSVRELLECPVC
Sbjct: 1   MASGNPFFEDMRSKPEVIDPPQNEDMMDVSESVNDPAQMALKPNVTVSSSVRELLECPVC 60

Query: 61  LNAMYPPIHQCSNGHTLCSGCKPRVHNRCPTCRHELGNIRCLALEKVAASLELPCKYQTF 120
           LNAMYPPIHQCSNGHTLCSGCKPRVHNRCPTCRHELGNIRCLALEKVAASLELPCKYQ+F
Sbjct: 61  LNAMYPPIHQCSNGHTLCSGCKPRVHNRCPTCRHELGNIRCLALEKVAASLELPCKYQSF 120

Query: 121 GCVGIYPYYSKLKHESQCIYRPYNCPYAGSECSVIGDIPFLVSHLKDDHKVDMHNGSTFN 180
           GC+GIYPYYSKLKHESQC+YRPYNCPYAGSEC+VIGDIP+LV+HLKDDHKVDMHNGSTFN
Sbjct: 121 GCLGIYPYYSKLKHESQCVYRPYNCPYAGSECTVIGDIPYLVAHLKDDHKVDMHNGSTFN 180

Query: 181 HRYVKSNPQEVENATWMLTVFSCFGQYFCLHFEAFQLGMAPVYIAFLRFMGDDNEAKNYS 240
           HRYVKSNP EVENATWMLTVFSCFGQYFCLHFEAFQLGMAPVYIAFLRFMGDDNEAKNYS
Sbjct: 181 HRYVKSNPHEVENATWMLTVFSCFGQYFCLHFEAFQLGMAPVYIAFLRFMGDDNEAKNYS 240

Query: 241 YSLEVGGNGRKMVWQGVPRSIRDSHRKVRDSFDGLIIQRNMALFFSGGDRKELKLRVTGR 300
           YSLEVGGNGRKM+WQGVPRSIRDSHRKVRDSFDGLIIQRNMALFFSGGDRKELKLRVTGR
Sbjct: 241 YSLEVGGNGRKMIWQGVPRSIRDSHRKVRDSFDGLIIQRNMALFFSGGDRKELKLRVTGR 300

Query: 301 IWKEQ 305
           IWKEQ
Sbjct: 301 IWKEQ 305

[Close]

BLAST of CsGy5G026910 vs. TrEMBL
Match: tr|A0A2N9H657|A0A2N9H657_FAGSY (E3 ubiquitin-protein ligase OS=Fagus sylvatica OX=28930 GN=FSB_LOCUS37819 PE=3 SV=1)

HSP 1 Score: 611.3 bits (1575), Expect = 1.2e-171
Identity = 282/305 (92.46%), Postives = 294/305 (96.39%), Query Frame = 0


Query: 1   MTSANPYFDDIRNKPEVIDPPQDDDMMDVSESVSDPARSGGKPN-VVSSSVRELLECPVC 60
           M S NPYFDDIR+KPEVIDPPQ +DM+DV E V+DPA +  KPN +VSSSVRELLECPVC
Sbjct: 1   MASGNPYFDDIRSKPEVIDPPQSEDMLDVGEHVNDPAATAIKPNLIVSSSVRELLECPVC 60

Query: 61  LNAMYPPIHQCSNGHTLCSGCKPRVHNRCPTCRHELGNIRCLALEKVAASLELPCKYQTF 120
           LNAMYPPIHQCSNGHTLCSGCKPRVHNRCPTCRHELGNIRCLALEKVAASLELPCKYQ+F
Sbjct: 61  LNAMYPPIHQCSNGHTLCSGCKPRVHNRCPTCRHELGNIRCLALEKVAASLELPCKYQSF 120

Query: 121 GCVGIYPYYSKLKHESQCIYRPYNCPYAGSECSVIGDIPFLVSHLKDDHKVDMHNGSTFN 180
           GC+GIYPYYSKLKHESQC+YRPYNCPYAGSEC+VIGDIP+LV+HLKDDHKVDMHNGSTFN
Sbjct: 121 GCIGIYPYYSKLKHESQCVYRPYNCPYAGSECTVIGDIPYLVAHLKDDHKVDMHNGSTFN 180

Query: 181 HRYVKSNPQEVENATWMLTVFSCFGQYFCLHFEAFQLGMAPVYIAFLRFMGDDNEAKNYS 240
           HRYVKSNPQEVENATWMLTVFSCFGQYFCLHFEAFQLGM PVYIAFLRFMGDDNEAKNYS
Sbjct: 181 HRYVKSNPQEVENATWMLTVFSCFGQYFCLHFEAFQLGMGPVYIAFLRFMGDDNEAKNYS 240

Query: 241 YSLEVGGNGRKMVWQGVPRSIRDSHRKVRDSFDGLIIQRNMALFFSGGDRKELKLRVTGR 300
           YSLEVGGNGRKM WQGVPRSIRDSHRKVRDSFDGLIIQRNMALFFSGGDRKELKLRVTGR
Sbjct: 241 YSLEVGGNGRKMTWQGVPRSIRDSHRKVRDSFDGLIIQRNMALFFSGGDRKELKLRVTGR 300

Query: 301 IWKEQ 305
           IWKEQ
Sbjct: 301 IWKEQ 305

The following BLAST results are available for this feature:

BLAST of CsGy5G026910 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_011655908.1	4.5e-183	100.00	PREDICTED: E3 ubiquitin-protein ligase SINAT5 [Cucumis sativus] >KGN52310.1 hypo...	[more]
XP_008446940.1	2.2e-182	99.34	PREDICTED: E3 ubiquitin-protein ligase SINAT5-like [Cucumis melo] >XP_008446941....	[more]
XP_023524871.1	2.0e-178	96.72	E3 ubiquitin-protein ligase DIS1 [Cucurbita pepo subsp. pepo] >XP_023524879.1 E3...	[more]
XP_022956691.1	1.3e-177	96.39	E3 ubiquitin-protein ligase DIS1 [Cucurbita moschata] >XP_022956692.1 E3 ubiquit...	[more]
XP_022992030.1	1.3e-177	96.39	E3 ubiquitin-protein ligase DIS1 [Cucurbita maxima]	[more]

BLAST of CsGy5G026910 vs. TAIR10


Match Name	E-value	Identity	Description
AT3G61790.1	3.0e-136	84.38	Protein with RING/U-box and TRAF-like domains	[more]
AT4G27880.1	4.7e-134	82.56	Protein with RING/U-box and TRAF-like domains	[more]
AT3G58040.1	6.4e-131	78.97	seven in absentia of Arabidopsis 2	[more]
AT2G41980.1	3.5e-129	76.62	Protein with RING/U-box and TRAF-like domains	[more]
AT5G53360.1	4.8e-102	80.39	TRAF-like superfamily protein	[more]

BLAST of CsGy5G026910 vs. Swiss-Prot


Match Name	E-value	Identity	Description
sp\|Q10L91\|DIS1_ORYSJ	3.2e-156	87.29	E3 ubiquitin-protein ligase DIS1 OS=Oryza sativa subsp. japonica OX=39947 GN=DIS...	[more]
sp\|Q84JL3\|SINA3_ARATH	5.3e-135	84.38	E3 ubiquitin-protein ligase SINAT3 OS=Arabidopsis thaliana OX=3702 GN=SINAT3 PE=...	[more]
sp\|Q8S3N1\|SINA5_ARATH	2.9e-133	75.78	E3 ubiquitin-protein ligase SINAT5 OS=Arabidopsis thaliana OX=3702 GN=SINAT5 PE=...	[more]
sp\|Q9STN8\|SINA4_ARATH	8.5e-133	82.56	E3 ubiquitin-protein ligase SINAT4 OS=Arabidopsis thaliana OX=3702 GN=SINAT4 PE=...	[more]
sp\|Q9M2P4\|SINA2_ARATH	1.2e-129	78.97	E3 ubiquitin-protein ligase SINAT2 OS=Arabidopsis thaliana OX=3702 GN=SINAT2 PE=...	[more]

BLAST of CsGy5G026910 vs. TrEMBL


Match Name	E-value	Identity	Description
tr\|A0A0A0KRN7\|A0A0A0KRN7_CUCSA	3.0e-183	100.00	E3 ubiquitin-protein ligase OS=Cucumis sativus OX=3659 GN=Csa_5G623730 PE=3 SV=1	[more]
tr\|A0A1S3BGX1\|A0A1S3BGX1_CUCME	1.5e-182	99.34	E3 ubiquitin-protein ligase OS=Cucumis melo OX=3656 GN=LOC103489502 PE=3 SV=1	[more]
tr\|E5GCK0\|E5GCK0_CUCME	1.5e-182	99.34	E3 ubiquitin-protein ligase OS=Cucumis melo subsp. melo OX=412675 PE=3 SV=1	[more]
tr\|A0A067KWI1\|A0A067KWI1_JATCU	5.3e-172	92.79	E3 ubiquitin-protein ligase OS=Jatropha curcas OX=180498 GN=JCGZ_24516 PE=3 SV=1	[more]
tr\|A0A2N9H657\|A0A2N9H657_FAGSY	1.2e-171	92.46	E3 ubiquitin-protein ligase OS=Fagus sylvatica OX=28930 GN=FSB_LOCUS37819 PE=3 S...	[more]

Annotated Terms

The following terms have been associated with this gene:

Vocabulary: **Molecular Function**
Term	Definition
GO:0008270	zinc ion binding
GO:0005515	protein binding

Vocabulary: **Cellular Component**
Term	Definition
GO:0005634	nucleus

Vocabulary: **Biological Process**
Term	Definition
GO:0007275	multicellular organism development
GO:0006511	ubiquitin-dependent protein catabolic process

Vocabulary: **INTERPRO**
Term	Definition
IPR013010	Znf_SIAH
IPR001841	Znf_RING
IPR004162	SINA-like
IPR013083	Znf_RING/FYVE/PHD
IPR018121	7-in-absentia-prot_TRAF-dom
IPR008974	TRAF-like

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0007275	multicellular organism development
biological_process	GO:0016567	protein ubiquitination
biological_process	GO:0006511	ubiquitin-dependent protein catabolic process
cellular_component	GO:0005634	nucleus
molecular_function	GO:0008270	zinc ion binding
molecular_function	GO:0005515	protein binding

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
CsGy5G026910.1	CsGy5G026910.1	mRNA

InterPro

Analysis Name: InterPro Annotations of cucumber Gy14 genome (v2)
Date Performed: 2018-09-25


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR008974	TRAF-like	GENE3D	G3DSA:2.60.210.10		coord: 166..298 e-value: 5.8E-34 score: 118.6
IPR008974	TRAF-like	SUPERFAMILY	SSF49599	TRAF domain-like	coord: 109..301
IPR018121	Seven-in-absentia protein, TRAF-like domain	PFAM	PF03145	Sina	coord: 98..297 e-value: 7.7E-76 score: 254.4
IPR013083	Zinc finger, RING/FYVE/PHD-type	GENE3D	G3DSA:3.30.40.10		coord: 110..164 e-value: 8.3E-16 score: 60.0
IPR013083	Zinc finger, RING/FYVE/PHD-type	GENE3D	G3DSA:3.30.40.10		coord: 19..109 e-value: 2.9E-9 score: 38.5
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 1..45
None	No IPR available	PANTHER	PTHR10315:SF29	SUBFAMILY NOT NAMED	coord: 6..304
None	No IPR available	CDD	cd16571	RING-HC_SIAHs	coord: 54..92 e-value: 1.15833E-14 score: 65.769
None	No IPR available	CDD	cd03829	Sina	coord: 170..298 e-value: 2.09525E-63 score: 197.609
None	No IPR available	SUPERFAMILY	SSF57850	RING/U-box	coord: 48..96
IPR004162	E3 ubiquitin-protein ligase SIN-like	PANTHER	PTHR10315	E3 UBIQUITIN PROTEIN LIGASE SIAH	coord: 6..304
IPR001841	Zinc finger, RING-type	PROSITE	PS50089	ZF_RING_2	coord: 56..92 score: 9.347
IPR013010	Zinc finger, SIAH-type	PROSITE	PS51081	ZF_SIAH	coord: 109..169 score: 13.921

Synteny

The following gene(s) are orthologous to this gene:


Gene	Orthologue	Organism	Block
CsGy5G026910	Cla009943	Watermelon (97103) v1	cgybwmB371
CsGy5G026910	Csa5G623730	Cucumber (Chinese Long) v2	cgybcuB223
CsGy5G026910	MELO3C012463	Melon (DHL92) v3.5.1	cgybmeB319
CsGy5G026910	ClCG05G026730	Watermelon (Charleston Gray)	cgybwcgB355
CsGy5G026910	CSPI05G27520	Wild cucumber (PI 183967)	cgybcpiB225
CsGy5G026910	CmaCh04G013380	Cucurbita maxima (Rimu)	cgybcmaB672
CsGy5G026910	CmoCh04G014130	Cucurbita moschata (Rifu)	cgybcmoB650
CsGy5G026910	Lsi04G000340	Bottle gourd (USVL1VR-Ls)	cgyblsiB337
CsGy5G026910	Cp4.1LG01g14980	Cucurbita pepo (Zucchini)	cgybcpeB648
CsGy5G026910	MELO3C012463.2	Melon (DHL92) v3.6.1	cgybmedB318
CsGy5G026910	CsaV3_5G036660	Cucumber (Chinese Long) v3	cgybcucB232
CsGy5G026910	Cla97C05G109000	Watermelon (97103) v2	cgybwmbB360
CsGy5G026910	Bhi06G000888	Wax gourd	cgybwgoB454
CsGy5G026910	Carg01986	Silver-seed gourd	carcgybB0831
CsGy5G026910	Carg20672	Silver-seed gourd	carcgybB0492

The following gene(s) are paralogous to this gene:

None

The following block(s) are covering this gene:


Gene	Organism	Block
CsGy5G026910	Cucurbita maxima (Rimu)	cgybcmaB626
CsGy5G026910	Cucurbita moschata (Rifu)	cgybcmoB603
CsGy5G026910	Cucurbita pepo (Zucchini)	cgybcpeB581
CsGy5G026910	Silver-seed gourd	carcgybB0720