CsGy5G021820 (gene) Cucumber (Gy14) v2
The following sequences are available for this feature:
Legend: CDSexon Hold the cursor over a type above to highlight its positions in the sequence below.ATGCCGTTCTCAGAAAACTTCCGTAAGGACATGGGGTTCGAATTTGACCCCGAAAAATGGGTCATTACTGGAATTCAATTACGACCTCCTCTATTGCTCACCATTAACAAAGAACACAGTCATTGCGACAATGAAGACCAACCGCCGACGCCTACTGGAGATGAATGCCGGATCCTATCGGGTTCCAAATGCCCACCCGCCCCTAAGAAGCCTAAATCTTCGTTGAAATTCAACCACGGCAACGTGCGCCAATTCTTCAAGCCTCCCGACTTAGAGGTTGTTTTTAGCCGACATGTCGAAAGGGCTAATTGAATAACAGCTCCATGGCTTCTTAACTTTAGCTATTACCCTTTCCAATCTTTGTTTTTTCTCTTTTTTTTGTTCGTTTCTTTTCTTAGTTGGTGCACTGTATAGAGATTGTAAAACGTAGCCAGTCAAAGCTGGTGGTTTCTGCCATTCAGATGGGCAGGAAGAACCAAAATTTTACCTTCTAA ATGCCGTTCTCAGAAAACTTCCGTAAGGACATGGGGTTCGAATTTGACCCCGAAAAATGGGTCATTACTGGAATTCAATTACGACCTCCTCTATTGCTCACCATTAACAAAGAACACAGTCATTGCGACAATGAAGACCAACCGCCGACGCCTACTGGAGATGAATGCCGGATCCTATCGGGTTCCAAATGCCCACCCGCCCCTAAGAAGCCTAAATCTTCGTTGAAATTCAACCACGGCAACGTGCGCCAATTCTTCAAGCCTCCCGACTTAGAGTTGGTGCACTGTATAGAGATTGTAAAACGTAGCCAGTCAAAGCTGGTGGTTTCTGCCATTCAGATGGGCAGGAAGAACCAAAATTTTACCTTCTAA ATGCCGTTCTCAGAAAACTTCCGTAAGGACATGGGGTTCGAATTTGACCCCGAAAAATGGGTCATTACTGGAATTCAATTACGACCTCCTCTATTGCTCACCATTAACAAAGAACACAGTCATTGCGACAATGAAGACCAACCGCCGACGCCTACTGGAGATGAATGCCGGATCCTATCGGGTTCCAAATGCCCACCCGCCCCTAAGAAGCCTAAATCTTCGTTGAAATTCAACCACGGCAACGTGCGCCAATTCTTCAAGCCTCCCGACTTAGAGTTGGTGCACTGTATAGAGATTGTAAAACGTAGCCAGTCAAAGCTGGTGGTTTCTGCCATTCAGATGGGCAGGAAGAACCAAAATTTTACCTTCTAA MPFSENFRKDMGFEFDPEKWVITGIQLRPPLLLTINKEHSHCDNEDQPPTPTGDECRILSGSKCPPAPKKPKSSLKFNHGNVRQFFKPPDLELVHCIEIVKRSQSKLVVSAIQMGRKNQNFTF
BLAST of CsGy5G021820 vs. NCBI nr
Match: KGN51766.1 (hypothetical protein Csa_5G598740 [Cucumis sativus]) HSP 1 Score: 263.1 bits (671), Expect = 4.8e-67 Identity = 123/123 (100.00%), Postives = 123/123 (100.00%), Query Frame = 0
BLAST of CsGy5G021820 vs. NCBI nr
Match: XP_022957284.1 (cyclin-dependent protein kinase inhibitor SMR6-like [Cucurbita moschata]) HSP 1 Score: 160.6 bits (405), Expect = 3.4e-36 Identity = 75/98 (76.53%), Postives = 82/98 (83.67%), Query Frame = 0
BLAST of CsGy5G021820 vs. NCBI nr
Match: XP_021647760.1 (cyclin-dependent protein kinase inhibitor SMR6-like [Hevea brasiliensis]) HSP 1 Score: 85.5 bits (210), Expect = 1.4e-13 Identity = 49/108 (45.37%), Postives = 66/108 (61.11%), Query Frame = 0
BLAST of CsGy5G021820 vs. NCBI nr
Match: PON53130.1 (cyclin-dependent kinase inhibitor SMR3-like protein [Parasponia andersonii]) HSP 1 Score: 84.3 bits (207), Expect = 3.1e-13 Identity = 49/118 (41.53%), Postives = 65/118 (55.08%), Query Frame = 0
BLAST of CsGy5G021820 vs. NCBI nr
Match: XP_021654851.1 (cyclin-dependent protein kinase inhibitor SMR6-like [Hevea brasiliensis]) HSP 1 Score: 84.0 bits (206), Expect = 4.0e-13 Identity = 47/98 (47.96%), Postives = 57/98 (58.16%), Query Frame = 0
BLAST of CsGy5G021820 vs. TAIR10
Match: AT5G40460.1 (unknown protein) HSP 1 Score: 68.6 bits (166), Expect = 3.2e-12 Identity = 41/107 (38.32%), Postives = 58/107 (54.21%), Query Frame = 0
BLAST of CsGy5G021820 vs. TAIR10
Match: AT1G60783.1 (unknown protein) HSP 1 Score: 61.6 bits (148), Expect = 3.9e-10 Identity = 37/80 (46.25%), Postives = 48/80 (60.00%), Query Frame = 0
BLAST of CsGy5G021820 vs. Swiss-Prot
Match: sp|Q29Q81|SMR6_ARATH (Cyclin-dependent protein kinase inhibitor SMR6 OS=Arabidopsis thaliana OX=3702 GN=SMR6 PE=1 SV=1) HSP 1 Score: 68.6 bits (166), Expect = 5.7e-11 Identity = 41/107 (38.32%), Postives = 58/107 (54.21%), Query Frame = 0
BLAST of CsGy5G021820 vs. Swiss-Prot
Match: sp|Q1G3Y4|SMR15_ARATH (Cyclin-dependent protein kinase inhibitor SMR15 OS=Arabidopsis thaliana OX=3702 GN=SMR15 PE=3 SV=1) HSP 1 Score: 61.6 bits (148), Expect = 7.0e-09 Identity = 37/80 (46.25%), Postives = 48/80 (60.00%), Query Frame = 0
BLAST of CsGy5G021820 vs. TrEMBL
Match: tr|A0A0A0KVI5|A0A0A0KVI5_CUCSA (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_5G598740 PE=4 SV=1) HSP 1 Score: 263.1 bits (671), Expect = 3.2e-67 Identity = 123/123 (100.00%), Postives = 123/123 (100.00%), Query Frame = 0
BLAST of CsGy5G021820 vs. TrEMBL
Match: tr|A0A2P2IWJ2|A0A2P2IWJ2_RHIMU (Uncharacterized protein OS=Rhizophora mucronata OX=61149 PE=4 SV=1) HSP 1 Score: 91.3 bits (225), Expect = 1.7e-15 Identity = 47/95 (49.47%), Postives = 61/95 (64.21%), Query Frame = 0
BLAST of CsGy5G021820 vs. TrEMBL
Match: tr|A0A2P5BWF5|A0A2P5BWF5_PARAD (Cyclin-dependent kinase inhibitor SMR3-like protein OS=Parasponia andersonii OX=3476 GN=PanWU01x14_205100 PE=4 SV=1) HSP 1 Score: 84.3 bits (207), Expect = 2.0e-13 Identity = 49/118 (41.53%), Postives = 65/118 (55.08%), Query Frame = 0
BLAST of CsGy5G021820 vs. TrEMBL
Match: tr|A0A067JRX4|A0A067JRX4_JATCU (Uncharacterized protein OS=Jatropha curcas OX=180498 GN=JCGZ_17805 PE=4 SV=1) HSP 1 Score: 82.8 bits (203), Expect = 5.9e-13 Identity = 45/96 (46.88%), Postives = 57/96 (59.38%), Query Frame = 0
BLAST of CsGy5G021820 vs. TrEMBL
Match: tr|A0A2I4EHV5|A0A2I4EHV5_9ROSI (uncharacterized protein LOC108989720 OS=Juglans regia OX=51240 GN=LOC108989720 PE=4 SV=1) HSP 1 Score: 82.4 bits (202), Expect = 7.7e-13 Identity = 45/89 (50.56%), Postives = 54/89 (60.67%), Query Frame = 0
The following BLAST results are available for this feature:
GO Assignments
This gene is annotated with the following GO terms.
The following mRNA feature(s) are a part of this gene:
Analysis Name: InterPro Annotations of cucumber Gy14 genome (v2)
Date Performed: 2018-09-25
The following gene(s) are orthologous to this gene:
The following gene(s) are paralogous to this gene: None The following block(s) are covering this gene: |