CsGy5G013540 (gene) Cucumber (Gy14) v2 | Cucurbit Genomics Database (CuGenDB)

Overview


Name	CsGy5G013540
Type	gene
Organism	Cucumis sativus (Cucumber (Gy14) v2)
Description	Expansin
Location	Chr5 : 17571056 .. 17581086 (-)

Genome Viewer

Gene Expression

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: five_prime_UTRexonCDSthree_prime_UTR

Hold the cursor over a type above to highlight its positions in the sequence below.

AGAAAAAGAAAAAGAAGAAGAAAAGTTTACAAAAGGAGAAAAATAAAGGCAGTCTTTTCCTTTCCCCCTCGATTCCATAACCGACATGAGGAGATAAAAACTATTATTCTATGCGGAACCAGCAAAACTATTCACTTCAATTAATTTTGTTTTTCTTTCTAACAACTTCCTAATCCTTTTTCTTACAATAATATAAATTAACACCAATTTCAAAAATTGGAAATTATAATTTTATTTTCTTCCTCACTTTGCCCCCCTCACTCTCTCCGGACTGATGTCGCCATCTCTTCCACTTCACTTCCTCTTCACTGTCGCAGCACTTCTCACATCTCCAGTCTCCTCCCATTTCTCTTCTACAACCTCCTCCCCCTCCCCGGATTCCTCCCCTTCCCTCTCCGACTGGAGATCTGCTCGTGCCACCTACTACGCCGCCTCCGACCCTCGCGATGCGGTCGGCGGAGCCTGTGGTTATGGCGATTTAGTGAAGGCAGGCTATGGCATGGCCACTGTGGGGCTCAGCGAGTCGTTGTTTGAACGCGGACAGATCTGCGGTGCCTGCTTTCAGCTTCGCTGTGTGGAGGACCTCCGGTGGTGTATTCCTGGAACCTCTATCATTGTCACTGTTACTAATTTCTGTGCGCCTAATTATGGCTTCACGGCTGAGGGTGGAGGCCATTGTAACCCTCCTAATAAGCATTTTGTCCTCCCTATTGAGGCCTTTGAAAAGATCGCTATCTGGAAGGCGGGAAACATGCCTGTTCAGTATCGGAGGTATATACTCCACTCCTTCTTTCTTCCGGCTGCTTTCATTTTCTTTTGCTTAGTCTAATTGGTTTAATTGAGGATTGAAATGTGTAAAGAGATCTGTGTTTGCTTTACTTTGTACTCGAATTTTACTCGCTTGCTAACACTTCACATTGCCTTTACATGTCTTGACCTCTTATGTTTTATTTTTAAATTTGAACTTATAATTCTACTCAACCGTAATCATCGTGAAGTTTGTTCGGTACATGATTTTACGTATGATTGAACCATCTGATTTATCTGACTCTGTTACCATATGTATACATTATCACTCTAGATTCTTTCAGCTATAGTGGTGGACTTGCCAGACTTTCAATCATCAATGTGCTAGAAAGCCACATTGTGCACTTGACAGCCTAAAAATTATTTAGCGTATTTAACCAAAATAGTAAGCTTCATCAGAATTGATGTACATCTTAAGACATAGTTAACCTTCCCTATATAGAGCCCAATTAACCAGTTAAGGTCAGAATCTCAAGCCTTCCTCAACGTAAATGCATCTGATTCAAGGAAAAATGAATACTACAATGTGATAGTTCCATATTAGAAGTGTTATGAAATCAACAAATAAAGAATATAAAAGAAGGAAAAAAGAACTGTAAAAGTAGAGAATCAATGTACAAATCCGTGTTGTTCACTAGTACTGTCTTATGTCCACGGGCAAGAGGGATAACAATTTTATTTGAGAGAATTGTCCTTACTTACATAATGTAGGCATCTCTAGGGTTTAGAGTTTATATAGTGCATTTCTCTAAATTCTAGGGTCACAAACGTAAATAACATAGAGATAGCAAATATGTAAGTAACTTAAGTTTTGGAGCCATTGCCTCGAACGCCCACCAGGGCGCGCCGCCCCTGGACCCTAGCTTGCTCATTGGTCAGCAAAACCCCTGTATTTGGTCTTTCAAAGTACTAGACAACAAATTCGAGGGATTCCAACAAGAAAGAGAAAGTACAAGTGTGTTAGACCTTTACTTTCTAATTAGTTAGCTTTTAATAGCTATAGCTTACAGCCTTGCACAATCTTCAAGGCCGCAAGGCTTTGCTTTTATAAAGAGCTTATTGAAGACAGCTGTCCTTACTTCCATACACATGACCTTCCTATTTTCTAGCGAATGTGGGACACTGCTGACATTTTTGGTAGTGGTGATAATAACCTTAAACTAGTTTGAAACACCAAGCTGTGTTTTGGTATTATGATAACAATGAATGAGTAATCACTCGCAAGAACTCTATCAGTTAGTTTGGTAGAGAAACCTTAAGATGTATGATATTCAAGTTAAAATTGATTGTCTTGTGGGGTTTAGAGGCCGAGATCCTTGTAATGATATGATCACCTTTTTTAGCAACAATGTTTTGAATGATGTTACTGTCAGTTGTTTTGTTGGGAAACTGTAATTCTTGTTGGACTTTGGAGAGAGTTGTGATGTTTATGCTACAATAGCAAATTCATGTCAATTAAATATATAAGGACTCAAAATGCAAGGACATTACAAAAATGAAGAAAAGGTGAAAGACAATACTAGGAAGCTTCATATAGGTTAGATGTCTTAATTCCAGAATCTTTTTAAACCATCTTCTCACAACCTAGATGGAGTTTCTTGTAAAATTCTTTGTTATGGTGAATAATATAGTGTTATATTTACCTTCACCCATCAATTTAAGCTTTTGTGTCAATTGGTGATTTAAGATGGTATAAGAGTAAGGAGTCCATGAAGGTCTTGTTTTCAAACCTCTACAATGTATTTCTTCTCCCAATTAAAATTGGTTTTCACTTGTTGGGTTTTCTATATTTCAAGCTCCCAAGTGAGGGGAGTGTTGAATAATATAATATTAAGTTTTTCTTCACCAATCAACTTAAGCTTTTGGGTTAATTGGTGATTTAAGAGTAATTGAAGGGGTTCCTCTGCCGCTCTGTGATTCTTTGAAGCTTTAAAGAGTCTGGTGGATGAATCTTGCAACCTTGATGGGTCAATAAGCTTCTGTCACCAGCTTGTATTGTAGTGTGGCTGATGGGTTGGTGGATGAGAAAAGGTGAGGTAATTAAAATTGAACTAGTGAAAGCATGTGATATAGGGTTCACTTGGATTTCATTAGATCTGTTCTTAGAGGGAGAAAGACTTTAGGTTGGCTTGTAGTAGCTGGGCAAACAGCGGAATTTGGATGCCAACTTTTGCTATTTTCCTATATGGTTTCCTCATGAGAGAATAAAAGCTTCATGGGTACTGTTCAAATAGATCTTTCCTCAATTTCCATTGTTCATTGTGTTTGTTTTTAATGCTTTGAGTTCATTCTCGATCTAGAATATTGTTTTCTTAGCTGTAGTTGGGAAATGATGCTGTACTCTTTGCTGAAGTTAAAGTGGGCAAACTCCTAAATTCTTCTCATTATTAACTCTTTTAGATTGCAAATGAACTTACATACTTCAGTTTGTTGGTCCCATATTTGCTCTTTTGTGTATGTTGGTATTCCATGCTTTTGTCCGGTTGGCCTAAGATTAAATTTTAAAGCAATGAATTCAGTGAAGTTTTTTTTCTCAACTTTTTTTTTTTGTAAATGAATTGAACTGCGAAGATAGTCAGTCACCTCGTGAATTCCTTTATGGTTTCCATCCCCCTTAGAAGATGTGATTTCGATTAGGAGACTGAAAGAAAAGAAACTTGGTTAATGACTCTGGTGCTTCCCCAATTAGATCAATTCTCTTTGGTACTGGACTACTATCATAAAGTATGGCAAAGACCCTCTTTGTTGGAGTACTTGTACTTGAAAAGCTAGAAGAAGCAGAAAACCATGTTTCCATTCACACTATCAAGTGCCAGCCGTTTCCTTCTCTAATTTTAAGGTCCGTACAGATAGAGTTCCCTTAGTTATCCAGAAAAACCTTGGATTGACAGTGATTCACTAACGTCTGTGCTTCCCATAGACACGTAATTCTAAGTCAAAAAGGTACCGGTTCATGACTGCTGGAATGGATGTGTAAGGAACCCTCATTATATGGAGCTTACAAAGGTTCCTCATTATATGCAGCTTGGAAATATGTGCCTCCACAATACAACCAGCTTCAGATAATATCAGGTCTGTCTCTCCTTGCCCCGCTTTTGACCATTTTAATCACTCAAGCTTCACTGATCCTAACACTAAAGTCACTTTAGTATGAGGAACTCCATGCCATTCAGTTGAGTCAATGCAGAAGCTATCAAATACTGAAATTATCTCTCCTTATAGTGTCAGCAGTGAAGACTCTCCGGGTTTAACTCACATTCAAGATGATAATGCAAATGTTGAAATTGAAGCAATGGATCTAATTTTCCTTTTCGAAGTGGAAGGTGGTGTTTTTAGTAATTCCCTTTCTCTTCCCCAATCAAATCAGTGGAAATTCCAAAGGAATTGTTGCCAATTATTAGACTGTGATGTGATGCTGGTTTAAGTCAGTGTAGTGTATATGCTCAAAATTTTTACCCATGAAGATCATTTCCTGGAACACAAGAGGCCTAAAAGATCCAAATAAACGTTCCGCTCTTAAGAAGTTTATAAAAAATCATCACCCGGACATGGTGCTAATCTAAGAATCAAAAATGGAAATTCTGGAAGTAAATTTCATTAAAACAATTTGGAGTTCTATGGATATAGGATGGGAATCAGTGGAATCTTATGGCGCTTCTGGAGGCATTCTTACCCTATGGGATAAAAGTAAAATCACAGTGGTGGAAACCATAAGAGGACATTATTCCCTCTCAATAAAATGTGTAACTTTGTGCAAGAAGTGTTGTTGGGTTACCAATGTTTATGGTCCATGTGGTTACAGAGAGAGGAAACTTGTTTGGCCAGAATTATTAACAATTACAGAATGTGGAGAAGAGGCTTGGTCTTTGGGAGGAGATTTTAATATCACTAGATGGGTCTATGAGAGGTTTCCAGTTGGCAGAAGCACAAGAGGAATGAGACAGTTTAATGCCTTTATAGATTCTGCCAATCTAATGGAAATTCCCCTTCAAAATGGCAAATTTACTTGGTCAAGAGAGGATCGCAGTGCTGCAAGATCTCTGTTGGACAGATTTTTTATTAACAGTAAATGGGATGATGAATTTGAAAACTCAAGAGTGACCCGTAAAGCAAGAACCTTCTTCGATCACTTTCCTTTATTATTAGAGGCAGGTGCAATACTATGGGGGCCATCCCCATTCAGATTTTGCAATAGTTGGTTGTAGATAAAAGAGTGCAACAAGGTTATTGAGGAAGTCTTGAAAATCGCCCTCCCAGACATTGGGTGGGCTGGTTTCATTCTTCATGACGTAAAGTGAAATTTGCTGTTAAAAATTGGCATGCTACTCATTTGATTGATACAAAAGCAGAAAGAGGAAAGGCTTTTGAGAGAGTTAGAAATAATTGATGGATTTGCAGAAAGTGTTGGTCTGAATGAAGTGGAATTGGCTCACAAGTCAGCTATACAAACAAAGTTGCTTTGTATTTACAGAACCGAAGAAATAAATTTTATACAGAAAAATAAACTAAATTGGCTTGCTATAGGAGATGAAAATACGGGCTTTTTTCACAGATTCCTTAATGCAAAAAAAAGGAAAAACCTAATCACAAAATTGGTGGATGAGCAAGGGGTGATAACGAAGTCTTTTCTCGACATTGAAAGGGTGATATTGTGGTTCTATGAAGACCTGTATAAAAAAATTCTAGGAGTCAGATATCTTCCTTTTATTGCAGATTGGCCTTGTGTCTCTGTTTCTCAAAAATTTTCACTAATCAACAGTTTCTCTGCGGTGGAGATTTTCAAGGCAATTAAAGCATTAGGAGGCAATATAAAGCACCCAGACCGGATGGTTTTACTACAGAATTTTTTGTGAAACACTGGCCAGTTCTAAAAGAAGGTTTGATGAGATTGTTTGAAGAATTCCACAGAAATGGTAAGCTCAATGCTTGCATTCAAGAAAACTTCATTTGCTTAATTCAGAAGAAAGAAGATGCGATTCATGTTAGAGACTTCAGACTCATTAGTCTCACAACCATCACTTACAAGGTGGTTGCCAAGGTACTAGCAGATAGGCTTAAAGGGGTAATGGATTCAATAATCAGCCCTTTTCAAAGCGCGTTCATTGAAGGTAGACAGGTTTTAGACCCCATTCTTATAGCTAACGAAGTTGTAGAAGACTATCAAGCCAAAGGGAAAAAAGGGTGGATTTTGAAACTAGACCTTGAAAAGGCCTTTGATAGGGTGCATTGGGGCTTCCTCGTAAAAGTTTAGCCCAAAATGGATTTCTTGGATTATGCGCTGTATAAAAAATACCAAGTTCTCCATTTTCATCAATGGTAAACCGAGAGGAAGGATTGTGGCTTCAAGGGGAATTCGTCAAGGTGACCCTCTTTCCTCTTTCTGCTAGTAAGTGAAGTGCTAGTAGGTTTAATAAATAAGCTGTATTTGAACGGTCACTTTGAAGGTTTTTTGGTGGGAAAAGACAGAATTCATATCCCCTTACTTCAGTACGCCGATGATACCATTTTGTTCTGCAAATATGATGAAAACATCCTAATTAAGCTCAAGTAGACCATTAATCTGTTTGAATGGTGTTTTGGCCAGAAAGTGAATTGGGAAAAATCAGCATTAAGTAGAATCAATTTTGGGGATGATGACCTTTCTCGCATGGCTGGAAAATTGGGCTGTAAAATGGAAAAACTTCCATTTTTGTACCTGGGTCTTCCTTTGGGAGGATATCCTAGGGAGAAATTGTTTTGGCAGCCAGTTGTAGACAGAATTTACAAAAAACTGGATAGATGGAAAAGATTCAATATTTCAAGAGGTGGAAGGCAAGTTCTTTGCAGCTCAGTTTTGGCCAACCTCCCTACTTACTATCTCTCCATCTTTGCCATTCTGGAAAAGGTAATTTCTGATTTCGAAAAGCTAATTTGAAATTTTTTTTGGGAGGGGAATTCTGGCAGCAAGATTAATCATTTGGCTTCATGGAAAAAGGTCAAGCCTTCTCAATTAGACAGGGGGCTAGGTTTGGGCGGTTTAAAAAATAAAAACAAGGCCCTACTTGCTAAATGGGGTTGGAGGTTTTTGAAAGAAGACTTCGTGTTGTGGCGTCAAGTAATTAAAAGTATACATGGCTGCACAAAATTTGATTGGCAGACTCTAAACAAATCAGGAAACAGTCTTAGAAGCCCATGGATCAGTAGCTCTCGAATGGGAAAAGGTGGTTGAGTTGGCAACTTTTAAAACAAGGAACGGAAGGAGAGTAGCTTTCTAGACAGATTTGTGGATAGGTTACCTTTTAAATCTCAGTTTTCGCATCTTTTCAGATTAGCTCTGCAGCCAAATGATTCAGTTGCTGCCCACTGGGATTTTGTCACTAAATCTTGGTCATTAGTATTTCGAAGATTGCTTAAAGATGAAGAAATTCAAGATTTCCAACGTCTTTTAACACTCATATCTCATAAAGATCTAATGGACTTGGATGACAGGAGAGTTTGGTCATTAGAATCTTTAGGCCATTTTTCAGTTAAGTCCCTTTCAAAGCATCTTTCTCCCTCTTCATCTTTGGAAAAAGTTTACTTTAAATGTCCTGCAGTCCAAGGAGAATAAATGTCCTGGTTTGGATTATGGCAGTGGGTTCTTTAAATTGTTCCGAGACTATGCAAAGGAAGCTTCACAGTACATGTTTGCTGACTTCAGTGTGCCCCCTTTGCTTGGAAAATAGTGAGCTATTAATTCACCTATTCATTTTCTGTCCCTTCTCATCAAATTGTTGGTTTAGCATATTTTCTATGCTCAAATCAATTTGGGTCTTTGATGGTTCGTTTAGTGCCAATGTGCGCCAATTACTAAGGGAGCCTTATTTATCAAAAAAAACCTTTTCTAATTTGGGTTAATTTGATAAAAGCGATTCTAGCTAAGATTTGGTTTGAACGTAACCAACGCATCTTCCATGATAAAAAAAGGAATTGGGCTGACATCATAGAGATTTCTAAAAGAAATGCAGCAACTTGGTGTTCTTCAAATGCAGAATTCAAAGATTACTCCATTCAAGACATCTGCCTCAATTGGACTACCTTCATCGAATAGTTTGTAGTTTGGACGGGTTTTATATGTATTTCTGCCGTTTTGTTTTTCCTTTCAGTCTTGCTTTAGTCTATCATAGGTAGCTTTCGTAGTTATTTTGGTGGTTACTTTGGTCTTTTCATGACCTTAGTATTGTTCTTGTTTTTTGGTCTTTTCTTTGTATTTTGGATATGATGAGGGTGCTATGGGGTGTCAACCTAGTTGAGATGTCCGGGTGCACCTACTGATCCTTTCTCTCTTTCTCTCCCTCTTTTCTTGGCTTCCCTATTATTCTCATTGTATAGCTCTCTTGTACATTGAGTTTATTAATAATAAAGAAGCTTGTCTCCTTTTCAAAAAAAAAGAAAAGAAATTCTATTAAATACTTGAACCTCACTGTAGGCCCTTGCATTAGAGAGTTAATACTAGCGATCAGGTTCAAAAAAGATTATCTTTATGCACATCTAGGCCAATTAGTGCGGAGCAATCGTAGAATGGTTTTCCTGTTCTTTTCCGAAAAAGAAGAAGATAATAATAATAATAAAAATGACATTTTCAAATATGACAATGAACTAAAATATTTACAAACTATATTAGTGTCTATCAATGATATTGATAAACAAAAAGAATATCAATGTCTATTAGTGATATTGAAAGAAGTCTATCATGGATAGATACCGAAATTTTGTTATATTTTGTAAATATTTTCAACAATTTTGTCATTTACAATAATTTCCCTGAAAAACTTCAAACACATGGTGATGATCATAATCACTTTTTTGTGCATTGTACAAATTTTGTTGCTGATTGTTGACTCTGTCGAGATGTTCTCTCTATTTTCAATTTAAGTGGTGAGCCTTCCACTATTTATATCTTTTGGACAAACCTCTTTATGGCCTTATGTTCAAAAGGAAGCTAAGTCTACTCCAAATTCCATTGTAGCCACATCTGATATATAAATAACAGATTTTTCTCCAACATCCTGAGAACTTCTGATGAGGTTGATATAAAAAGAGACAAGAAATGAAAAGAATAAAAGAAAACTTATGTTGAGATTCTTGACTAGGTGAAATTGGTGATTTTTCTGTGTATCCTTTCCATAGTTCTTTTGCTTTGTGCCAATTAGAGTAGTTTCGCTGTAAATTCCTTTTGTGGATAGATCTATCCTTCCCCCTCTCTTCTGCCTACACCAAACGGCTTAATGATACCGTTCGGTATTTTGTTTTTTGGTTTTGAAAATTATGTTAAATTAAGTAATAAACAGTACTTCTACTCATAAGTTTCTATGTCGGCTTTATTCAAATTTTCACAAACATATAGTTTTTTATTTTTTATTTTTTTTAAAATAGTAGTTTTCAAATTTTTGTTTTTGTTTTTGTTTTCAGAATTTAGGTAAAAGTTGGATTGCTTATTCAAATAATGTGGAAAGTACAATTGAACAATTGAGAGAAAACCATGACCAAATGGGGCCTTTATTTTTTCTTTAAAAATAGCACATTAGCAACATATAATTTGGTGTATCGTATTGCCTCTGCTCCATCTTCCTAAATCAGTGAGTCTCAACCTCTGTTGATATGATTACTGCAGGATCAAATGCCGAAAGGAAGGGGGTATTCGATATACAGTTTCTGGGTATGGCATTTATCTCTCAGTGTTGATAAGTAACGTTGCGGGCGCTGGAGATGTGAGTGCTGTAAAGATCAAGGGCACGAGAACTGGTTGGCTTCCGATGGGTCGTAACTGGGGGCAAAACTGGCACATTAATGCTGATTTGAACCATCAAGCCCTTTCGTTTGAAGTCACTAGCAGTGATGGAGTAACAATTACATCCTACAATGTTGCTCCAAAGGATTGGAACTTTGGGCAGACTTTTGAAGGCAAACAATTTGAATCTTGAAATTTTCCACTCTTGTAATTTTTGTCTGTAAAAGTTTTTAATTAGTTTCTATTTTCTATAATTCCATTAGGCATTTACAAAAGGGTTTTTCTTCTTCTTTATTTCGGGTGCTTAATTTATCCCCTTTTTTCTTAACCGAAGGGTAATAGGTTTTGAGTTTCATATCTTCATCATCAATTGTACAAGAACAGTGCTCAACTCGAGAGGTTTTGGATGGTATTTGTGAAGGATAGGCGTACGGAAATTCAATCTAAATTATATTATTAAGGGTTTTCTCTTAAA

mRNA sequence

AGAAAAAGAAAAAGAAGAAGAAAAGTTTACAAAAGGAGAAAAATAAAGGCAGTCTTTTCCTTTCCCCCTCGATTCCATAACCGACATGAGGAGATAAAAACTATTATTCTATGCGGAACCAGCAAAACTATTCACTTCAATTAATTTTGTTTTTCTTTCTAACAACTTCCTAATCCTTTTTCTTACAATAATATAAATTAACACCAATTTCAAAAATTGGAAATTATAATTTTATTTTCTTCCTCACTTTGCCCCCCTCACTCTCTCCGGACTGATGTCGCCATCTCTTCCACTTCACTTCCTCTTCACTGTCGCAGCACTTCTCACATCTCCAGTCTCCTCCCATTTCTCTTCTACAACCTCCTCCCCCTCCCCGGATTCCTCCCCTTCCCTCTCCGACTGGAGATCTGCTCGTGCCACCTACTACGCCGCCTCCGACCCTCGCGATGCGGTCGGCGGAGCCTGTGGTTATGGCGATTTAGTGAAGGCAGGCTATGGCATGGCCACTGTGGGGCTCAGCGAGTCGTTGTTTGAACGCGGACAGATCTGCGGTGCCTGCTTTCAGCTTCGCTGTGTGGAGGACCTCCGGTGGTGTATTCCTGGAACCTCTATCATTGTCACTGTTACTAATTTCTGTGCGCCTAATTATGGCTTCACGGCTGAGGGTGGAGGCCATTGTAACCCTCCTAATAAGCATTTTGTCCTCCCTATTGAGGCCTTTGAAAAGATCGCTATCTGGAAGGCGGGAAACATGCCTGTTCAGTATCGGAGGATCAAATGCCGAAAGGAAGGGGGTATTCGATATACAGTTTCTGGGTATGGCATTTATCTCTCAGTGTTGATAAGTAACGTTGCGGGCGCTGGAGATGTGAGTGCTGTAAAGATCAAGGGCACGAGAACTGGTTGGCTTCCGATGGGTCGTAACTGGGGGCAAAACTGGCACATTAATGCTGATTTGAACCATCAAGCCCTTTCGTTTGAAGTCACTAGCAGTGATGGAGTAACAATTACATCCTACAATGTTGCTCCAAAGGATTGGAACTTTGGGCAGACTTTTGAAGGCAAACAATTTGAATCTTGAAATTTTCCACTCTTGTAATTTTTGTCTGTAAAAGTTTTTAATTAGTTTCTATTTTCTATAATTCCATTAGGCATTTACAAAAGGGTTTTTCTTCTTCTTTATTTCGGGTGCTTAATTTATCCCCTTTTTTCTTAACCGAAGGGTAATAGGTTTTGAGTTTCATATCTTCATCATCAATTGTACAAGAACAGTGCTCAACTCGAGAGGTTTTGGATGGTATTTGTGAAGGATAGGCGTACGGAAATTCAATCTAAATTATATTATTAAGGGTTTTCTCTTAAA

Coding sequence (CDS)

ATGTCGCCATCTCTTCCACTTCACTTCCTCTTCACTGTCGCAGCACTTCTCACATCTCCAGTCTCCTCCCATTTCTCTTCTACAACCTCCTCCCCCTCCCCGGATTCCTCCCCTTCCCTCTCCGACTGGAGATCTGCTCGTGCCACCTACTACGCCGCCTCCGACCCTCGCGATGCGGTCGGCGGAGCCTGTGGTTATGGCGATTTAGTGAAGGCAGGCTATGGCATGGCCACTGTGGGGCTCAGCGAGTCGTTGTTTGAACGCGGACAGATCTGCGGTGCCTGCTTTCAGCTTCGCTGTGTGGAGGACCTCCGGTGGTGTATTCCTGGAACCTCTATCATTGTCACTGTTACTAATTTCTGTGCGCCTAATTATGGCTTCACGGCTGAGGGTGGAGGCCATTGTAACCCTCCTAATAAGCATTTTGTCCTCCCTATTGAGGCCTTTGAAAAGATCGCTATCTGGAAGGCGGGAAACATGCCTGTTCAGTATCGGAGGATCAAATGCCGAAAGGAAGGGGGTATTCGATATACAGTTTCTGGGTATGGCATTTATCTCTCAGTGTTGATAAGTAACGTTGCGGGCGCTGGAGATGTGAGTGCTGTAAAGATCAAGGGCACGAGAACTGGTTGGCTTCCGATGGGTCGTAACTGGGGGCAAAACTGGCACATTAATGCTGATTTGAACCATCAAGCCCTTTCGTTTGAAGTCACTAGCAGTGATGGAGTAACAATTACATCCTACAATGTTGCTCCAAAGGATTGGAACTTTGGGCAGACTTTTGAAGGCAAACAATTTGAATCTTGA

Protein sequence

MSPSLPLHFLFTVAALLTSPVSSHFSSTTSSPSPDSSPSLSDWRSARATYYAASDPRDAVGGACGYGDLVKAGYGMATVGLSESLFERGQICGACFQLRCVEDLRWCIPGTSIIVTVTNFCAPNYGFTAEGGGHCNPPNKHFVLPIEAFEKIAIWKAGNMPVQYRRIKCRKEGGIRYTVSGYGIYLSVLISNVAGAGDVSAVKIKGTRTGWLPMGRNWGQNWHINADLNHQALSFEVTSSDGVTITSYNVAPKDWNFGQTFEGKQFES

Homology

[Close]

BLAST of CsGy5G013540 vs. NCBI nr
Match: XP_004148906.1 (PREDICTED: expansin-A13 [Cucumis sativus])

HSP 1 Score: 557.4 bits (1435), Expect = 2.7e-155
Identity = 268/268 (100.00%), Postives = 268/268 (100.00%), Query Frame = 0


Query: 1   MSPSLPLHFLFTVAALLTSPVSSHFSSTTSSPSPDSSPSLSDWRSARATYYAASDPRDAV 60
           MSPSLPLHFLFTVAALLTSPVSSHFSSTTSSPSPDSSPSLSDWRSARATYYAASDPRDAV
Sbjct: 1   MSPSLPLHFLFTVAALLTSPVSSHFSSTTSSPSPDSSPSLSDWRSARATYYAASDPRDAV 60

Query: 61  GGACGYGDLVKAGYGMATVGLSESLFERGQICGACFQLRCVEDLRWCIPGTSIIVTVTNF 120
           GGACGYGDLVKAGYGMATVGLSESLFERGQICGACFQLRCVEDLRWCIPGTSIIVTVTNF
Sbjct: 61  GGACGYGDLVKAGYGMATVGLSESLFERGQICGACFQLRCVEDLRWCIPGTSIIVTVTNF 120

Query: 121 CAPNYGFTAEGGGHCNPPNKHFVLPIEAFEKIAIWKAGNMPVQYRRIKCRKEGGIRYTVS 180
           CAPNYGFTAEGGGHCNPPNKHFVLPIEAFEKIAIWKAGNMPVQYRRIKCRKEGGIRYTVS
Sbjct: 121 CAPNYGFTAEGGGHCNPPNKHFVLPIEAFEKIAIWKAGNMPVQYRRIKCRKEGGIRYTVS 180

Query: 181 GYGIYLSVLISNVAGAGDVSAVKIKGTRTGWLPMGRNWGQNWHINADLNHQALSFEVTSS 240
           GYGIYLSVLISNVAGAGDVSAVKIKGTRTGWLPMGRNWGQNWHINADLNHQALSFEVTSS
Sbjct: 181 GYGIYLSVLISNVAGAGDVSAVKIKGTRTGWLPMGRNWGQNWHINADLNHQALSFEVTSS 240

Query: 241 DGVTITSYNVAPKDWNFGQTFEGKQFES 269
           DGVTITSYNVAPKDWNFGQTFEGKQFES
Sbjct: 241 DGVTITSYNVAPKDWNFGQTFEGKQFES 268

[Close]

BLAST of CsGy5G013540 vs. NCBI nr
Match: XP_008463163.1 (PREDICTED: expansin-A13 [Cucumis melo])

HSP 1 Score: 551.6 bits (1420), Expect = 1.5e-153
Identity = 264/268 (98.51%), Postives = 267/268 (99.63%), Query Frame = 0


Query: 1   MSPSLPLHFLFTVAALLTSPVSSHFSSTTSSPSPDSSPSLSDWRSARATYYAASDPRDAV 60
           MSPSLPLHFLFTVAA LTSPVSSHFSST+SSPSPDS+PSLSDWRSARATYYAASDPRDAV
Sbjct: 1   MSPSLPLHFLFTVAAFLTSPVSSHFSSTSSSPSPDSTPSLSDWRSARATYYAASDPRDAV 60

Query: 61  GGACGYGDLVKAGYGMATVGLSESLFERGQICGACFQLRCVEDLRWCIPGTSIIVTVTNF 120
           GGACGYGDLVKAGYGMATVGLSESLFERGQICGACFQLRCVEDLRWCIPGTSIIVTVTNF
Sbjct: 61  GGACGYGDLVKAGYGMATVGLSESLFERGQICGACFQLRCVEDLRWCIPGTSIIVTVTNF 120

Query: 121 CAPNYGFTAEGGGHCNPPNKHFVLPIEAFEKIAIWKAGNMPVQYRRIKCRKEGGIRYTVS 180
           CAPNYGFTAEGGGHCNPPNKHFVLPIEAFEKIAIWKAGNMPVQYRRIKCRKEGGIRYTVS
Sbjct: 121 CAPNYGFTAEGGGHCNPPNKHFVLPIEAFEKIAIWKAGNMPVQYRRIKCRKEGGIRYTVS 180

Query: 181 GYGIYLSVLISNVAGAGDVSAVKIKGTRTGWLPMGRNWGQNWHINADLNHQALSFEVTSS 240
           GYGIYLSVLISNVAGAGDVSAVKIKGTRTGWLPMGRNWGQNWHINADLNHQALSFEVTSS
Sbjct: 181 GYGIYLSVLISNVAGAGDVSAVKIKGTRTGWLPMGRNWGQNWHINADLNHQALSFEVTSS 240

Query: 241 DGVTITSYNVAPKDWNFGQTFEGKQFES 269
           DGVTI+SYNVAPKDWNFGQTFEGKQFES
Sbjct: 241 DGVTISSYNVAPKDWNFGQTFEGKQFES 268

[Close]

BLAST of CsGy5G013540 vs. NCBI nr
Match: XP_022961528.1 (expansin-A13-like [Cucurbita moschata])

HSP 1 Score: 530.8 bits (1366), Expect = 2.7e-147
Identity = 252/268 (94.03%), Postives = 263/268 (98.13%), Query Frame = 0


Query: 1   MSPSLPLHFLFTVAALLTSPVSSHFSSTTSSPSPDSSPSLSDWRSARATYYAASDPRDAV 60
           MSPSLPLHFLFTVA  LTSPV+SHFSS+TSSP P+S+PSLSDWRSARATYYAASDPRDAV
Sbjct: 1   MSPSLPLHFLFTVAVALTSPVASHFSSSTSSPLPESAPSLSDWRSARATYYAASDPRDAV 60

Query: 61  GGACGYGDLVKAGYGMATVGLSESLFERGQICGACFQLRCVEDLRWCIPGTSIIVTVTNF 120
           GGACGYGDLVKAGYGMATVGLSE+LFERGQICGACFQLRCVEDLRWCIPGTSIIVTVTNF
Sbjct: 61  GGACGYGDLVKAGYGMATVGLSEALFERGQICGACFQLRCVEDLRWCIPGTSIIVTVTNF 120

Query: 121 CAPNYGFTAEGGGHCNPPNKHFVLPIEAFEKIAIWKAGNMPVQYRRIKCRKEGGIRYTVS 180
           CAPNYGFTA+GGG CNPPNKHFVLPIEAFEKIAIWKAGNMPVQYRRIKCRKEGG+RYT+S
Sbjct: 121 CAPNYGFTADGGGRCNPPNKHFVLPIEAFEKIAIWKAGNMPVQYRRIKCRKEGGVRYTIS 180

Query: 181 GYGIYLSVLISNVAGAGDVSAVKIKGTRTGWLPMGRNWGQNWHINADLNHQALSFEVTSS 240
           GYGIYLSVLISNVAGAGDVSAVKIKG+RTGWL MGRNWGQNWHINADLN+QALSFEVTSS
Sbjct: 181 GYGIYLSVLISNVAGAGDVSAVKIKGSRTGWLSMGRNWGQNWHINADLNNQALSFEVTSS 240

Query: 241 DGVTITSYNVAPKDWNFGQTFEGKQFES 269
           DGVTITSYNVAPK+WNFGQTFEGKQFES
Sbjct: 241 DGVTITSYNVAPKNWNFGQTFEGKQFES 268

[Close]

BLAST of CsGy5G013540 vs. NCBI nr
Match: XP_023517227.1 (expansin-A13-like [Cucurbita pepo subsp. pepo])

HSP 1 Score: 527.7 bits (1358), Expect = 2.3e-146
Identity = 250/268 (93.28%), Postives = 262/268 (97.76%), Query Frame = 0


Query: 1   MSPSLPLHFLFTVAALLTSPVSSHFSSTTSSPSPDSSPSLSDWRSARATYYAASDPRDAV 60
           MSPSLP+HFLFTVA  LTSPV+SHFSS+TSSP P+S+PSLSDWRSARATYYAASDPRDAV
Sbjct: 1   MSPSLPVHFLFTVAVALTSPVASHFSSSTSSPLPESAPSLSDWRSARATYYAASDPRDAV 60

Query: 61  GGACGYGDLVKAGYGMATVGLSESLFERGQICGACFQLRCVEDLRWCIPGTSIIVTVTNF 120
           GGACGYGDLVKAGYGMATVGLSE+LFERGQICGACFQLRCVEDLRWCIPGTSIIVTVTNF
Sbjct: 61  GGACGYGDLVKAGYGMATVGLSEALFERGQICGACFQLRCVEDLRWCIPGTSIIVTVTNF 120

Query: 121 CAPNYGFTAEGGGHCNPPNKHFVLPIEAFEKIAIWKAGNMPVQYRRIKCRKEGGIRYTVS 180
           CAPNYGFTA+GGG CNPPNKHFVLPIEAFEKIAIWKAGNMPVQYRRIKCRKEGG+RYT+S
Sbjct: 121 CAPNYGFTADGGGRCNPPNKHFVLPIEAFEKIAIWKAGNMPVQYRRIKCRKEGGVRYTIS 180

Query: 181 GYGIYLSVLISNVAGAGDVSAVKIKGTRTGWLPMGRNWGQNWHINADLNHQALSFEVTSS 240
           GYGIYLSVLISNVAGAGDVSAVKIKG+RTGWL MGRNWGQNWH NADLN+QALSFEVTSS
Sbjct: 181 GYGIYLSVLISNVAGAGDVSAVKIKGSRTGWLSMGRNWGQNWHTNADLNNQALSFEVTSS 240

Query: 241 DGVTITSYNVAPKDWNFGQTFEGKQFES 269
           DGVTITSYNVAPK+WNFGQTFEGKQFES
Sbjct: 241 DGVTITSYNVAPKNWNFGQTFEGKQFES 268

[Close]

BLAST of CsGy5G013540 vs. NCBI nr
Match: XP_023551665.1 (expansin-A13-like [Cucurbita pepo subsp. pepo])

HSP 1 Score: 527.7 bits (1358), Expect = 2.3e-146
Identity = 253/269 (94.05%), Postives = 264/269 (98.14%), Query Frame = 0


Query: 1   MSPSLPLHF-LFTVAALLTSPVSSHFSSTTSSPSPDSSPSLSDWRSARATYYAASDPRDA 60
           MSPSLPLHF LFT+AA+LTSPV+SHFSS TSSPSP+ +PSLS+WRSARATYYAA+DPRDA
Sbjct: 1   MSPSLPLHFLLFTLAAVLTSPVASHFSSATSSPSPEVAPSLSEWRSARATYYAAADPRDA 60

Query: 61  VGGACGYGDLVKAGYGMATVGLSESLFERGQICGACFQLRCVEDLRWCIPGTSIIVTVTN 120
           VGGACGYGDLVKAGYGMATVGLSE+LFERG ICGACFQLRCVEDLRWCIPGTSIIVTVTN
Sbjct: 61  VGGACGYGDLVKAGYGMATVGLSEALFERGMICGACFQLRCVEDLRWCIPGTSIIVTVTN 120

Query: 121 FCAPNYGFTAEGGGHCNPPNKHFVLPIEAFEKIAIWKAGNMPVQYRRIKCRKEGGIRYTV 180
           FCAPNYGFTAEGGGHCNPPNKHFVLPIEAFEKIAIWKAGNMPVQYRRIKCRKEGGIRYTV
Sbjct: 121 FCAPNYGFTAEGGGHCNPPNKHFVLPIEAFEKIAIWKAGNMPVQYRRIKCRKEGGIRYTV 180

Query: 181 SGYGIYLSVLISNVAGAGDVSAVKIKGTRTGWLPMGRNWGQNWHINADLNHQALSFEVTS 240
           SG+GIYLSVLISNVAGAGDVSAVKIKG+RTGWL MGRNWGQNWHINADLN+QALSFEVTS
Sbjct: 181 SGFGIYLSVLISNVAGAGDVSAVKIKGSRTGWLSMGRNWGQNWHINADLNNQALSFEVTS 240

Query: 241 SDGVTITSYNVAPKDWNFGQTFEGKQFES 269
           SDGVTITSYNVAPKDWNFGQTFEGKQFES
Sbjct: 241 SDGVTITSYNVAPKDWNFGQTFEGKQFES 269

[Close]

BLAST of CsGy5G013540 vs. TAIR10
Match: AT3G03220.1 (expansin A13)

HSP 1 Score: 432.2 bits (1110), Expect = 2.4e-121
Identity = 204/265 (76.98%), Postives = 231/265 (87.17%), Query Frame = 0


Query: 5   LPLHFLFTVAALLTSPVSSHFSSTT-SSPSPDSSPSLSDWRSARATYYAASDPRDAVGGA 64
           LPL FL      L+ P   H+SS+T            S+WR ARATYYAA++PRDAVGGA
Sbjct: 6   LPLLFL-----ALSPPAICHYSSSTXXXXXXXXXXDASEWRPARATYYAATNPRDAVGGA 65

Query: 65  CGYGDLVKAGYGMATVGLSESLFERGQICGACFQLRCVEDLRWCIPGTSIIVTVTNFCAP 124
           CGYGDLVK+GYGMATVGLSE+LFERGQICGACF+LRCV+DLRWCIPGTSII+T TNFCAP
Sbjct: 66  CGYGDLVKSGYGMATVGLSETLFERGQICGACFELRCVDDLRWCIPGTSIILTATNFCAP 125

Query: 125 NYGFTAEGGGHCNPPNKHFVLPIEAFEKIAIWKAGNMPVQYRRIKCRKEGGIRYTVSGYG 184
           NYGF  +GGGHCNPPNKHFVLPIEAFEKIAIWKAGNMPVQYRRI CRKEG +R+TV G G
Sbjct: 126 NYGFDPDGGGHCNPPNKHFVLPIEAFEKIAIWKAGNMPVQYRRINCRKEGSMRFTVDGGG 185

Query: 185 IYLSVLISNVAGAGDVSAVKIKGTRTGWLPMGRNWGQNWHINADLNHQALSFEVTSSDGV 244
           I++SVLI+NVAG+GD++AVKIKG+RTGWLPMGRNWGQNWHINADL +QALSFEVTSSD  
Sbjct: 186 IFISVLITNVAGSGDIAAVKIKGSRTGWLPMGRNWGQNWHINADLRNQALSFEVTSSDRS 245

Query: 245 TITSYNVAPKDWNFGQTFEGKQFES 269
           T+TSYNV+PK+WN+GQTFEGKQFE+
Sbjct: 246 TVTSYNVSPKNWNYGQTFEGKQFET 265

[Close]

BLAST of CsGy5G013540 vs. TAIR10
Match: AT5G56320.1 (expansin A14)

HSP 1 Score: 281.6 bits (719), Expect = 5.2e-76
Identity = 130/228 (57.02%), Postives = 163/228 (71.49%), Query Frame = 0


Query: 41  SDWRSARATYYAASDPRDAVGGACGYGDLVKAGYGMATVGLSESLFERGQICGACFQLRC 100
           S W +ARAT+Y  +D    +GGACGYG+L   GYG  T  LS +LF  GQ CGACFQ++C
Sbjct: 27  SGWVNARATFYGGADASGTMGGACGYGNLYSQGYGTNTAALSTALFNGGQSCGACFQIKC 86

Query: 101 VEDLRWCIPGTSIIVTVTNFCAPNYGFTAEGGGHCNPPNKHFVLPIEAFEKIAIWKAGNM 160
           V+D +WCI GT I VT TNFC PN+      GG CNPP  HF L    F +IA +KAG +
Sbjct: 87  VDDPKWCIGGT-ITVTGTNFCPPNFAQANNAGGWCNPPQHHFDLAQPIFLRIAQYKAGVV 146

Query: 161 PVQYRRIKCRKEGGIRYTVSGYGIYLSVLISNVAGAGDVSAVKIKGTRTGWLPMGRNWGQ 220
           PVQYRR+ CR++GGIR+T++G+  +  VLI+NVAGAGDV +V IKGT T W  M RNWGQ
Sbjct: 147 PVQYRRVACRRKGGIRFTINGHSYFNLVLITNVAGAGDVISVSIKGTNTRWQSMSRNWGQ 206

Query: 221 NWHINADLNHQALSFEVTSSDGVTITSYNVAPKDWNFGQTFEGKQFES 269
           NW  NA L+ QALSF+VT+SDG T+ S N  P++W+FGQT+ GKQF +
Sbjct: 207 NWQSNAKLDGQALSFKVTTSDGRTVISNNATPRNWSFGQTYTGKQFRA 253

[Close]

BLAST of CsGy5G013540 vs. TAIR10
Match: AT3G55500.1 (expansin A16)

HSP 1 Score: 278.1 bits (710), Expect = 5.7e-75
Identity = 123/225 (54.67%), Postives = 159/225 (70.67%), Query Frame = 0


Query: 43  WRSARATYYAASDPRDAVGGACGYGDLVKAGYGMATVGLSESLFERGQICGACFQLRCVE 102
           W++A AT+Y  +D    +GGACGYG+L   GYG  T  LS SLF  GQ CGACF+++CV 
Sbjct: 34  WQTAHATFYGGNDASGTMGGACGYGNLYSQGYGTNTAALSTSLFNSGQSCGACFEIKCVN 93

Query: 103 DLRWCIPGT-SIIVTVTNFCAPNYGFTAEGGGHCNPPNKHFVLPIEAFEKIAIWKAGNMP 162
           D +WC PG  S+ VT TNFC PN    ++ GG CNPP  HF L +  F KIA ++AG +P
Sbjct: 94  DPKWCHPGNPSVFVTATNFCPPNLAQPSDNGGWCNPPRSHFDLAMPVFLKIAEYRAGIVP 153

Query: 163 VQYRRIKCRKEGGIRYTVSGYGIYLSVLISNVAGAGDVSAVKIKGTRTGWLPMGRNWGQN 222
           + YRR+ CRK GGIR+T++G+  +  VLI+NVAGAGD++   +KG++TGW+ + RNWGQN
Sbjct: 154 ISYRRVACRKSGGIRFTINGHRYFNLVLITNVAGAGDIARTSVKGSKTGWMSLTRNWGQN 213

Query: 223 WHINADLNHQALSFEVTSSDGVTITSYNVAPKDWNFGQTFEGKQF 267
           W  NA L  Q+LSF VTSSD  T TS+N+AP +W FGQTF GK F
Sbjct: 214 WQSNAVLVGQSLSFRVTSSDRRTSTSWNIAPSNWQFGQTFVGKNF 258

[Close]

BLAST of CsGy5G013540 vs. TAIR10
Match: AT2G37640.1 (Barwin-like endoglucanases superfamily protein)

HSP 1 Score: 275.0 bits (702), Expect = 4.8e-74
Identity = 127/247 (51.42%), Postives = 170/247 (68.83%), Query Frame = 0


Query: 21  VSSHFSSTTSSPSPDSSPSLSDWRSARATYYAASDPRDAVGGACGYGDLVKAGYGMATVG 80
           V++ F  T ++       S   W++A AT+Y  SD    +GGACGYG+L   GYG+ T  
Sbjct: 14  VTASFLLTATNAKIPGVYSGGPWQNAHATFYGGSDASGTMGGACGYGNLYSQGYGVNTAA 73

Query: 81  LSESLFERGQICGACFQLRCVEDLRWCIPGT-SIIVTVTNFCAPNYGFTAEGGGHCNPPN 140
           LS +LF  G  CGACF+++C +D RWC+PG  SI+VT TNFC PN+   ++ GG CNPP 
Sbjct: 74  LSTALFNNGFSCGACFEIKCTDDPRWCVPGNPSILVTATNFCPPNFAQPSDDGGWCNPPR 133

Query: 141 KHFVLPIEAFEKIAIWKAGNMPVQYRRIKCRKEGGIRYTVSGYGIYLSVLISNVAGAGDV 200
           +HF L +  F KI +++AG +PV YRR+ CRK GGIR+TV+G+  +  VL++NVAGAGD+
Sbjct: 134 EHFDLAMPMFLKIGLYRAGIVPVSYRRVPCRKIGGIRFTVNGFRYFNLVLVTNVAGAGDI 193

Query: 201 SAVKIKGTRTGWLPMGRNWGQNWHINADLNHQALSFEVTSSDGVTITSYNVAPKDWNFGQ 260
           + V +KG++T W+ M RNWGQNW  NA L  Q+LSF VT+SD  + TS+NVAP  W FGQ
Sbjct: 194 NGVSVKGSKTDWVRMSRNWGQNWQSNAVLIGQSLSFRVTASDRRSSTSWNVAPATWQFGQ 253

Query: 261 TFEGKQF 267
           TF GK F
Sbjct: 254 TFSGKNF 260

[Close]

BLAST of CsGy5G013540 vs. TAIR10
Match: AT2G39700.1 (expansin A4)

HSP 1 Score: 272.3 bits (695), Expect = 3.1e-73
Identity = 122/225 (54.22%), Postives = 156/225 (69.33%), Query Frame = 0


Query: 43  WRSARATYYAASDPRDAVGGACGYGDLVKAGYGMATVGLSESLFERGQICGACFQLRCVE 102
           W++A AT+Y  SD    +GGACGYG+L   GYG  T  LS +LF  G  CGACF+L+C  
Sbjct: 31  WQNAHATFYGGSDASGTMGGACGYGNLYSQGYGTNTAALSTALFNNGMSCGACFELKCAN 90

Query: 103 DLRWCIPGT-SIIVTVTNFCAPNYGFTAEGGGHCNPPNKHFVLPIEAFEKIAIWKAGNMP 162
           D +WC  G+ SI++T TNFC PN    ++ GG CNPP +HF L +  F KIA ++AG +P
Sbjct: 91  DPQWCHSGSPSILITATNFCPPNLAQPSDNGGWCNPPREHFDLAMPVFLKIAQYRAGIVP 150

Query: 163 VQYRRIKCRKEGGIRYTVSGYGIYLSVLISNVAGAGDVSAVKIKGTRTGWLPMGRNWGQN 222
           V YRR+ CRK GGIR+T++G+  +  VLI+NVAGAGD+    +KG+RTGW+ + RNWGQN
Sbjct: 151 VSYRRVPCRKRGGIRFTINGHRYFNLVLITNVAGAGDIVRASVKGSRTGWMSLSRNWGQN 210

Query: 223 WHINADLNHQALSFEVTSSDGVTITSYNVAPKDWNFGQTFEGKQF 267
           W  NA L  QALSF VT SD  T TS+N+ P +W FGQTF GK F
Sbjct: 211 WQSNAVLVGQALSFRVTGSDRRTSTSWNMVPSNWQFGQTFVGKNF 255

[Close]

BLAST of CsGy5G013540 vs. Swiss-Prot
Match: sp|Q9M9P0|EXP13_ARATH (Expansin-A13 OS=Arabidopsis thaliana OX=3702 GN=EXPA13 PE=2 SV=2)

HSP 1 Score: 432.2 bits (1110), Expect = 4.3e-120
Identity = 204/265 (76.98%), Postives = 231/265 (87.17%), Query Frame = 0


Query: 5   LPLHFLFTVAALLTSPVSSHFSSTT-SSPSPDSSPSLSDWRSARATYYAASDPRDAVGGA 64
           LPL FL      L+ P   H+SS+T            S+WR ARATYYAA++PRDAVGGA
Sbjct: 6   LPLLFL-----ALSPPAICHYSSSTXXXXXXXXXXDASEWRPARATYYAATNPRDAVGGA 65

Query: 65  CGYGDLVKAGYGMATVGLSESLFERGQICGACFQLRCVEDLRWCIPGTSIIVTVTNFCAP 124
           CGYGDLVK+GYGMATVGLSE+LFERGQICGACF+LRCV+DLRWCIPGTSII+T TNFCAP
Sbjct: 66  CGYGDLVKSGYGMATVGLSETLFERGQICGACFELRCVDDLRWCIPGTSIILTATNFCAP 125

Query: 125 NYGFTAEGGGHCNPPNKHFVLPIEAFEKIAIWKAGNMPVQYRRIKCRKEGGIRYTVSGYG 184
           NYGF  +GGGHCNPPNKHFVLPIEAFEKIAIWKAGNMPVQYRRI CRKEG +R+TV G G
Sbjct: 126 NYGFDPDGGGHCNPPNKHFVLPIEAFEKIAIWKAGNMPVQYRRINCRKEGSMRFTVDGGG 185

Query: 185 IYLSVLISNVAGAGDVSAVKIKGTRTGWLPMGRNWGQNWHINADLNHQALSFEVTSSDGV 244
           I++SVLI+NVAG+GD++AVKIKG+RTGWLPMGRNWGQNWHINADL +QALSFEVTSSD  
Sbjct: 186 IFISVLITNVAGSGDIAAVKIKGSRTGWLPMGRNWGQNWHINADLRNQALSFEVTSSDRS 245

Query: 245 TITSYNVAPKDWNFGQTFEGKQFES 269
           T+TSYNV+PK+WN+GQTFEGKQFE+
Sbjct: 246 TVTSYNVSPKNWNYGQTFEGKQFET 265

[Close]

BLAST of CsGy5G013540 vs. Swiss-Prot
Match: sp|Q7XUD0|EXP10_ORYSJ (Expansin-A10 OS=Oryza sativa subsp. japonica OX=39947 GN=EXPA10 PE=2 SV=2)

HSP 1 Score: 356.3 bits (913), Expect = 3.0e-97
Identity = 166/266 (62.41%), Postives = 209/266 (78.57%), Query Frame = 0


Query: 1   MSPSLPLHFLFTVAALLTSPVSSHFSSTTSSPSPDSSPSLSDWRSARATYYAASDPRDAV 60
           M+P L L  LF + AL T             PS   S +LS+WRSA+A+YYAA DP DA+
Sbjct: 1   MAPCL-LLVLFLLPALATG---------HQHPSTLGSSALSEWRSAKASYYAA-DPEDAI 60

Query: 61  GGACGYGDLVKAGYGMATVGLSESLFERGQICGACFQLRCVEDLRWCIPGTSIIVTVTNF 120
           GGACG+GDL K GYGMATVGLS +LFERG  CG C++++CV+DL++C+PGTSI+VT TNF
Sbjct: 61  GGACGFGDLGKHGYGMATVGLSTALFERGAACGGCYEVKCVDDLKYCLPGTSIVVTATNF 120

Query: 121 CAPNYGFTAEGGGHCNPPNKHFVLPIEAFEKIAIWKAGNMPVQYRRIKCRKEGGIRYTVS 180
           CAPN+G  A+ GG CNPPN HF+LPI++FEKIA+WKAG MP+QYRR+ C ++GG+R+ V+
Sbjct: 121 CAPNFGLPADAGGVCNPPNHHFLLPIQSFEKIALWKAGVMPIQYRRVNCLRDGGVRFAVA 180

Query: 181 GYGIYLSVLISNVAGAGDVSAVKIKGTRTGWLPMGRNWGQNWHINADLNHQALSFEVTSS 240
           G   +L+VLISNV GAGDV +VKIKGT +GWL MGRNWGQ WHIN+D   Q LSFE+TSS
Sbjct: 181 GRSFFLTVLISNVGGAGDVRSVKIKGTESGWLSMGRNWGQIWHINSDFRGQPLSFELTSS 240

Query: 241 DGVTITSYNVAPKDWNFGQTFEGKQF 267
           DG T+T+YNV PK+W+FG+T+ GKQF
Sbjct: 241 DGKTLTNYNVVPKEWDFGKTYTGKQF 255

[Close]

BLAST of CsGy5G013540 vs. Swiss-Prot
Match: sp|Q9FMA0|EXP14_ARATH (Expansin-A14 OS=Arabidopsis thaliana OX=3702 GN=EXPA14 PE=2 SV=1)

HSP 1 Score: 281.6 bits (719), Expect = 9.3e-75
Identity = 130/228 (57.02%), Postives = 163/228 (71.49%), Query Frame = 0


Query: 41  SDWRSARATYYAASDPRDAVGGACGYGDLVKAGYGMATVGLSESLFERGQICGACFQLRC 100
           S W +ARAT+Y  +D    +GGACGYG+L   GYG  T  LS +LF  GQ CGACFQ++C
Sbjct: 27  SGWVNARATFYGGADASGTMGGACGYGNLYSQGYGTNTAALSTALFNGGQSCGACFQIKC 86

Query: 101 VEDLRWCIPGTSIIVTVTNFCAPNYGFTAEGGGHCNPPNKHFVLPIEAFEKIAIWKAGNM 160
           V+D +WCI GT I VT TNFC PN+      GG CNPP  HF L    F +IA +KAG +
Sbjct: 87  VDDPKWCIGGT-ITVTGTNFCPPNFAQANNAGGWCNPPQHHFDLAQPIFLRIAQYKAGVV 146

Query: 161 PVQYRRIKCRKEGGIRYTVSGYGIYLSVLISNVAGAGDVSAVKIKGTRTGWLPMGRNWGQ 220
           PVQYRR+ CR++GGIR+T++G+  +  VLI+NVAGAGDV +V IKGT T W  M RNWGQ
Sbjct: 147 PVQYRRVACRRKGGIRFTINGHSYFNLVLITNVAGAGDVISVSIKGTNTRWQSMSRNWGQ 206

Query: 221 NWHINADLNHQALSFEVTSSDGVTITSYNVAPKDWNFGQTFEGKQFES 269
           NW  NA L+ QALSF+VT+SDG T+ S N  P++W+FGQT+ GKQF +
Sbjct: 207 NWQSNAKLDGQALSFKVTTSDGRTVISNNATPRNWSFGQTYTGKQFRA 253

[Close]

BLAST of CsGy5G013540 vs. Swiss-Prot
Match: sp|Q9M2S9|EXP16_ARATH (Expansin-A16 OS=Arabidopsis thaliana OX=3702 GN=EXPA16 PE=2 SV=1)

HSP 1 Score: 278.1 bits (710), Expect = 1.0e-73
Identity = 123/225 (54.67%), Postives = 159/225 (70.67%), Query Frame = 0


Query: 43  WRSARATYYAASDPRDAVGGACGYGDLVKAGYGMATVGLSESLFERGQICGACFQLRCVE 102
           W++A AT+Y  +D    +GGACGYG+L   GYG  T  LS SLF  GQ CGACF+++CV 
Sbjct: 34  WQTAHATFYGGNDASGTMGGACGYGNLYSQGYGTNTAALSTSLFNSGQSCGACFEIKCVN 93

Query: 103 DLRWCIPGT-SIIVTVTNFCAPNYGFTAEGGGHCNPPNKHFVLPIEAFEKIAIWKAGNMP 162
           D +WC PG  S+ VT TNFC PN    ++ GG CNPP  HF L +  F KIA ++AG +P
Sbjct: 94  DPKWCHPGNPSVFVTATNFCPPNLAQPSDNGGWCNPPRSHFDLAMPVFLKIAEYRAGIVP 153

Query: 163 VQYRRIKCRKEGGIRYTVSGYGIYLSVLISNVAGAGDVSAVKIKGTRTGWLPMGRNWGQN 222
           + YRR+ CRK GGIR+T++G+  +  VLI+NVAGAGD++   +KG++TGW+ + RNWGQN
Sbjct: 154 ISYRRVACRKSGGIRFTINGHRYFNLVLITNVAGAGDIARTSVKGSKTGWMSLTRNWGQN 213

Query: 223 WHINADLNHQALSFEVTSSDGVTITSYNVAPKDWNFGQTFEGKQF 267
           W  NA L  Q+LSF VTSSD  T TS+N+AP +W FGQTF GK F
Sbjct: 214 WQSNAVLVGQSLSFRVTSSDRRTSTSWNIAPSNWQFGQTFVGKNF 258

[Close]

BLAST of CsGy5G013540 vs. Swiss-Prot
Match: sp|O80932|EXPA3_ARATH (Expansin-A3 OS=Arabidopsis thaliana OX=3702 GN=EXPA3 PE=2 SV=1)

HSP 1 Score: 275.0 bits (702), Expect = 8.7e-73
Identity = 127/247 (51.42%), Postives = 170/247 (68.83%), Query Frame = 0


Query: 21  VSSHFSSTTSSPSPDSSPSLSDWRSARATYYAASDPRDAVGGACGYGDLVKAGYGMATVG 80
           V++ F  T ++       S   W++A AT+Y  SD    +GGACGYG+L   GYG+ T  
Sbjct: 14  VTASFLLTATNAKIPGVYSGGPWQNAHATFYGGSDASGTMGGACGYGNLYSQGYGVNTAA 73

Query: 81  LSESLFERGQICGACFQLRCVEDLRWCIPGT-SIIVTVTNFCAPNYGFTAEGGGHCNPPN 140
           LS +LF  G  CGACF+++C +D RWC+PG  SI+VT TNFC PN+   ++ GG CNPP 
Sbjct: 74  LSTALFNNGFSCGACFEIKCTDDPRWCVPGNPSILVTATNFCPPNFAQPSDDGGWCNPPR 133

Query: 141 KHFVLPIEAFEKIAIWKAGNMPVQYRRIKCRKEGGIRYTVSGYGIYLSVLISNVAGAGDV 200
           +HF L +  F KI +++AG +PV YRR+ CRK GGIR+TV+G+  +  VL++NVAGAGD+
Sbjct: 134 EHFDLAMPMFLKIGLYRAGIVPVSYRRVPCRKIGGIRFTVNGFRYFNLVLVTNVAGAGDI 193

Query: 201 SAVKIKGTRTGWLPMGRNWGQNWHINADLNHQALSFEVTSSDGVTITSYNVAPKDWNFGQ 260
           + V +KG++T W+ M RNWGQNW  NA L  Q+LSF VT+SD  + TS+NVAP  W FGQ
Sbjct: 194 NGVSVKGSKTDWVRMSRNWGQNWQSNAVLIGQSLSFRVTASDRRSSTSWNVAPATWQFGQ 253

Query: 261 TFEGKQF 267
           TF GK F
Sbjct: 254 TFSGKNF 260

[Close]

BLAST of CsGy5G013540 vs. TrEMBL
Match: tr|A0A1S3CIL6|A0A1S3CIL6_CUCME (Expansin OS=Cucumis melo OX=3656 GN=LOC103501369 PE=3 SV=1)

HSP 1 Score: 551.6 bits (1420), Expect = 9.8e-154
Identity = 264/268 (98.51%), Postives = 267/268 (99.63%), Query Frame = 0


Query: 1   MSPSLPLHFLFTVAALLTSPVSSHFSSTTSSPSPDSSPSLSDWRSARATYYAASDPRDAV 60
           MSPSLPLHFLFTVAA LTSPVSSHFSST+SSPSPDS+PSLSDWRSARATYYAASDPRDAV
Sbjct: 1   MSPSLPLHFLFTVAAFLTSPVSSHFSSTSSSPSPDSTPSLSDWRSARATYYAASDPRDAV 60

Query: 61  GGACGYGDLVKAGYGMATVGLSESLFERGQICGACFQLRCVEDLRWCIPGTSIIVTVTNF 120
           GGACGYGDLVKAGYGMATVGLSESLFERGQICGACFQLRCVEDLRWCIPGTSIIVTVTNF
Sbjct: 61  GGACGYGDLVKAGYGMATVGLSESLFERGQICGACFQLRCVEDLRWCIPGTSIIVTVTNF 120

Query: 121 CAPNYGFTAEGGGHCNPPNKHFVLPIEAFEKIAIWKAGNMPVQYRRIKCRKEGGIRYTVS 180
           CAPNYGFTAEGGGHCNPPNKHFVLPIEAFEKIAIWKAGNMPVQYRRIKCRKEGGIRYTVS
Sbjct: 121 CAPNYGFTAEGGGHCNPPNKHFVLPIEAFEKIAIWKAGNMPVQYRRIKCRKEGGIRYTVS 180

Query: 181 GYGIYLSVLISNVAGAGDVSAVKIKGTRTGWLPMGRNWGQNWHINADLNHQALSFEVTSS 240
           GYGIYLSVLISNVAGAGDVSAVKIKGTRTGWLPMGRNWGQNWHINADLNHQALSFEVTSS
Sbjct: 181 GYGIYLSVLISNVAGAGDVSAVKIKGTRTGWLPMGRNWGQNWHINADLNHQALSFEVTSS 240

Query: 241 DGVTITSYNVAPKDWNFGQTFEGKQFES 269
           DGVTI+SYNVAPKDWNFGQTFEGKQFES
Sbjct: 241 DGVTISSYNVAPKDWNFGQTFEGKQFES 268

[Close]

BLAST of CsGy5G013540 vs. TrEMBL
Match: tr|A0A067KHR0|A0A067KHR0_JATCU (Expansin OS=Jatropha curcas OX=180498 GN=JCGZ_10508 PE=3 SV=1)

HSP 1 Score: 461.1 bits (1185), Expect = 1.7e-126
Identity = 225/282 (79.79%), Postives = 251/282 (89.01%), Query Frame = 0


Query: 1   MSPSL------PLHFLFTVAALLTS--------PVSSHFSSTTSSPSPDSSPSLSDWRSA 60
           MSPSL      PL+ + T+A  L S        PV+SH SS+TS P P S+ SLS+WRSA
Sbjct: 1   MSPSLPPPAPPPLNRIQTLALPLFSFLFFTFSLPVTSHTSSSTSPPRPHST-SLSEWRSA 60

Query: 61  RATYYAASDPRDAVGGACGYGDLVKAGYGMATVGLSESLFERGQICGACFQLRCVEDLRW 120
            ATYYAASDPRD+VGGACGYGDL K+GYG+ATVGLSE++FERGQICGACF+LRCVEDLRW
Sbjct: 61  HATYYAASDPRDSVGGACGYGDLGKSGYGLATVGLSEAMFERGQICGACFELRCVEDLRW 120

Query: 121 CIPGTSIIVTVTNFCAPNYGFTAEGGGHCNPPNKHFVLPIEAFEKIAIWKAGNMPVQYRR 180
           CIPGTS+IVTVTNFCAPNYGFTA+GGGHCNPPNKHFVLPIE++EKIAIWKAGNMPVQYRR
Sbjct: 121 CIPGTSVIVTVTNFCAPNYGFTADGGGHCNPPNKHFVLPIESYEKIAIWKAGNMPVQYRR 180

Query: 181 IKCRKEGGIRYTVSGYGIYLSVLISNVAGAGDVSAVKIKGTRTGWLPMGRNWGQNWHINA 240
           IKCRKEGG+R+TVSG G ++SVLISNVAGAGDV+AVKIKG+RTGWL MGRNWGQNWHINA
Sbjct: 181 IKCRKEGGMRFTVSGSGNFISVLISNVAGAGDVTAVKIKGSRTGWLQMGRNWGQNWHINA 240

Query: 241 DLNHQALSFEVTSSDGVTITSYNVAPKDWNFGQTFEGKQFES 269
           DL +Q LSFEVTSSDG+TITSYNVAPKDWNFGQTFEGKQFE+
Sbjct: 241 DLKNQPLSFEVTSSDGLTITSYNVAPKDWNFGQTFEGKQFET 281

[Close]

BLAST of CsGy5G013540 vs. TrEMBL
Match: tr|W9REN4|W9REN4_9ROSA (Expansin OS=Morus notabilis OX=981085 GN=L484_007788 PE=3 SV=1)

HSP 1 Score: 457.2 bits (1175), Expect = 2.5e-125
Identity = 215/265 (81.13%), Postives = 242/265 (91.32%), Query Frame = 0


Query: 4   SLPLHFLFTVAALLTSPVSSHFSSTTSSPSPDSSPSLSDWRSARATYYAASDPRDAVGGA 63
           +LPL  +FT  +LL S  +SH  +++ S    SSPSLS WRSARATYYAA+DPRD VGGA
Sbjct: 11  TLPLLLVFT--SLLLSTATSHSPASSFS---SSSPSLSVWRSARATYYAAADPRDLVGGA 70

Query: 64  CGYGDLVKAGYGMATVGLSESLFERGQICGACFQLRCVEDLRWCIPGTSIIVTVTNFCAP 123
           CGYGDLVK+GYGMATVGLSE+LFERGQICGACF++RCV+DLRWCIPGTSIIVT TNFC+P
Sbjct: 71  CGYGDLVKSGYGMATVGLSEALFERGQICGACFEVRCVQDLRWCIPGTSIIVTATNFCSP 130

Query: 124 NYGFTAEGGGHCNPPNKHFVLPIEAFEKIAIWKAGNMPVQYRRIKCRKEGGIRYTVSGYG 183
           NYGFTAEGGGHCNPPNKHFVLPIEAFEKIAIWKAGNMPVQYRRIKCRKEGGIR+T+ G G
Sbjct: 131 NYGFTAEGGGHCNPPNKHFVLPIEAFEKIAIWKAGNMPVQYRRIKCRKEGGIRFTIDGEG 190

Query: 184 IYLSVLISNVAGAGDVSAVKIKGTRTGWLPMGRNWGQNWHINADLNHQALSFEVTSSDGV 243
           I++SVLISNVAG GDV+AVK+KG+RTGWLPMGRNWGQNWH+NADL HQ LSFEVTSSD V
Sbjct: 191 IFISVLISNVAGVGDVTAVKVKGSRTGWLPMGRNWGQNWHVNADLKHQPLSFEVTSSDDV 250

Query: 244 TITSYNVAPKDWNFGQTFEGKQFES 269
           T+TS+NVAPK+WNFGQ+FEGKQF+S
Sbjct: 251 TVTSFNVAPKNWNFGQSFEGKQFDS 270

[Close]

BLAST of CsGy5G013540 vs. TrEMBL
Match: tr|A0A1U8P0Z3|A0A1U8P0Z3_GOSHI (Expansin OS=Gossypium hirsutum OX=3635 GN=LOC107953946 PE=3 SV=1)

HSP 1 Score: 454.9 bits (1169), Expect = 1.2e-124
Identity = 216/267 (80.90%), Postives = 241/267 (90.26%), Query Frame = 0


Query: 4   SLPLHFLFTVAALLT--SPVSSHFSSTTSSPSPDSSPSLSDWRSARATYYAASDPRDAVG 63
           S P     T A LL+  S V+SH+SS+T S SP  +P  + W SARATYYAASDPRDAVG
Sbjct: 49  SNPSSITATAALLLSLISTVTSHYSSSTFSSSP-PAPQSTVWHSARATYYAASDPRDAVG 108

Query: 64  GACGYGDLVKAGYGMATVGLSESLFERGQICGACFQLRCVEDLRWCIPGTSIIVTVTNFC 123
           GACGYGDLVKAGYGMATVGLSE+LF+RGQICGACF+LRCV+DLRWCIPGTSIIVT TNFC
Sbjct: 109 GACGYGDLVKAGYGMATVGLSEALFQRGQICGACFELRCVDDLRWCIPGTSIIVTATNFC 168

Query: 124 APNYGFTAEGGGHCNPPNKHFVLPIEAFEKIAIWKAGNMPVQYRRIKCRKEGGIRYTVSG 183
           APNYGFTAEGGG CNPPNKHFVLPIEAFEKIAIWKAGNMPVQYRRIKCRKEGG+R+T+ G
Sbjct: 169 APNYGFTAEGGGRCNPPNKHFVLPIEAFEKIAIWKAGNMPVQYRRIKCRKEGGVRFTIDG 228

Query: 184 YGIYLSVLISNVAGAGDVSAVKIKGTRTGWLPMGRNWGQNWHINADLNHQALSFEVTSSD 243
            GI++SVLISNV GAGD++AVKIKG+RTGWLPMGRNWGQNWHIN+DL +Q LSFEVT+SD
Sbjct: 229 SGIFVSVLISNVGGAGDIAAVKIKGSRTGWLPMGRNWGQNWHINSDLRNQPLSFEVTNSD 288

Query: 244 GVTITSYNVAPKDWNFGQTFEGKQFES 269
           G+T+TSYNVAPK+WNFGQTFEGKQFE+
Sbjct: 289 GLTLTSYNVAPKNWNFGQTFEGKQFEA 314

[Close]

BLAST of CsGy5G013540 vs. TrEMBL
Match: tr|A0A2P5Q312|A0A2P5Q312_GOSBA (Expansin OS=Gossypium barbadense OX=3634 GN=GOBAR_DD34175 PE=3 SV=1)

HSP 1 Score: 454.9 bits (1169), Expect = 1.2e-124
Identity = 216/267 (80.90%), Postives = 241/267 (90.26%), Query Frame = 0


Query: 4   SLPLHFLFTVAALLT--SPVSSHFSSTTSSPSPDSSPSLSDWRSARATYYAASDPRDAVG 63
           S P     T A LL+  S V+SH+SS+T S SP  +P  + W SARATYYAASDPRDAVG
Sbjct: 2   SNPSSITATAALLLSLISTVTSHYSSSTFSSSP-PAPQSTVWHSARATYYAASDPRDAVG 61

Query: 64  GACGYGDLVKAGYGMATVGLSESLFERGQICGACFQLRCVEDLRWCIPGTSIIVTVTNFC 123
           GACGYGDLVKAGYGMATVGLSE+LF+RGQICGACF+LRCV+DLRWCIPGTSIIVT TNFC
Sbjct: 62  GACGYGDLVKAGYGMATVGLSEALFQRGQICGACFELRCVDDLRWCIPGTSIIVTATNFC 121

Query: 124 APNYGFTAEGGGHCNPPNKHFVLPIEAFEKIAIWKAGNMPVQYRRIKCRKEGGIRYTVSG 183
           APNYGFTAEGGG CNPPNKHFVLPIEAFEKIAIWKAGNMPVQYRRIKCRKEGG+R+T+ G
Sbjct: 122 APNYGFTAEGGGRCNPPNKHFVLPIEAFEKIAIWKAGNMPVQYRRIKCRKEGGVRFTIDG 181

Query: 184 YGIYLSVLISNVAGAGDVSAVKIKGTRTGWLPMGRNWGQNWHINADLNHQALSFEVTSSD 243
            GI++SVLISNV GAGD++AVKIKG+RTGWLPMGRNWGQNWHIN+DL +Q LSFEVT+SD
Sbjct: 182 SGIFVSVLISNVGGAGDIAAVKIKGSRTGWLPMGRNWGQNWHINSDLRNQPLSFEVTNSD 241

Query: 244 GVTITSYNVAPKDWNFGQTFEGKQFES 269
           G+T+TSYNVAPK+WNFGQTFEGKQFE+
Sbjct: 242 GLTLTSYNVAPKNWNFGQTFEGKQFEA 267

The following BLAST results are available for this feature:

BLAST of CsGy5G013540 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_004148906.1	2.7e-155	100.00	PREDICTED: expansin-A13 [Cucumis sativus]	[more]
XP_008463163.1	1.5e-153	98.51	PREDICTED: expansin-A13 [Cucumis melo]	[more]
XP_022961528.1	2.7e-147	94.03	expansin-A13-like [Cucurbita moschata]	[more]
XP_023517227.1	2.3e-146	93.28	expansin-A13-like [Cucurbita pepo subsp. pepo]	[more]
XP_023551665.1	2.3e-146	94.05	expansin-A13-like [Cucurbita pepo subsp. pepo]	[more]

BLAST of CsGy5G013540 vs. TAIR10


Match Name	E-value	Identity	Description
AT3G03220.1	2.4e-121	76.98	expansin A13	[more]
AT5G56320.1	5.2e-76	57.02	expansin A14	[more]
AT3G55500.1	5.7e-75	54.67	expansin A16	[more]
AT2G37640.1	4.8e-74	51.42	Barwin-like endoglucanases superfamily protein	[more]
AT2G39700.1	3.1e-73	54.22	expansin A4	[more]

BLAST of CsGy5G013540 vs. Swiss-Prot


Match Name	E-value	Identity	Description
sp\|Q9M9P0\|EXP13_ARATH	4.3e-120	76.98	Expansin-A13 OS=Arabidopsis thaliana OX=3702 GN=EXPA13 PE=2 SV=2	[more]
sp\|Q7XUD0\|EXP10_ORYSJ	3.0e-97	62.41	Expansin-A10 OS=Oryza sativa subsp. japonica OX=39947 GN=EXPA10 PE=2 SV=2	[more]
sp\|Q9FMA0\|EXP14_ARATH	9.3e-75	57.02	Expansin-A14 OS=Arabidopsis thaliana OX=3702 GN=EXPA14 PE=2 SV=1	[more]
sp\|Q9M2S9\|EXP16_ARATH	1.0e-73	54.67	Expansin-A16 OS=Arabidopsis thaliana OX=3702 GN=EXPA16 PE=2 SV=1	[more]
sp\|O80932\|EXPA3_ARATH	8.7e-73	51.42	Expansin-A3 OS=Arabidopsis thaliana OX=3702 GN=EXPA3 PE=2 SV=1	[more]

BLAST of CsGy5G013540 vs. TrEMBL


Match Name	E-value	Identity	Description
tr\|A0A1S3CIL6\|A0A1S3CIL6_CUCME	9.8e-154	98.51	Expansin OS=Cucumis melo OX=3656 GN=LOC103501369 PE=3 SV=1	[more]
tr\|A0A067KHR0\|A0A067KHR0_JATCU	1.7e-126	79.79	Expansin OS=Jatropha curcas OX=180498 GN=JCGZ_10508 PE=3 SV=1	[more]
tr\|W9REN4\|W9REN4_9ROSA	2.5e-125	81.13	Expansin OS=Morus notabilis OX=981085 GN=L484_007788 PE=3 SV=1	[more]
tr\|A0A1U8P0Z3\|A0A1U8P0Z3_GOSHI	1.2e-124	80.90	Expansin OS=Gossypium hirsutum OX=3635 GN=LOC107953946 PE=3 SV=1	[more]
tr\|A0A2P5Q312\|A0A2P5Q312_GOSBA	1.2e-124	80.90	Expansin OS=Gossypium barbadense OX=3634 GN=GOBAR_DD34175 PE=3 SV=1	[more]

Annotated Terms

The following terms have been associated with this gene:

Vocabulary: **Biological Process**
Term	Definition
GO:0009664	plant-type cell wall organization

Vocabulary: **Cellular Component**
Term	Definition
GO:0005576	extracellular region

Vocabulary: **INTERPRO**
Term	Definition
IPR007117	Expansin_CBD
IPR036908	RlpA-like_sf
IPR009009	RlpA-like_DPBB
IPR036749	Expansin_CBD_sf
IPR007112	Expansin/allergen_DPBB_dom
IPR002963	Expansin
IPR007118	Expan_Lol_pI

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0009664	plant-type cell wall organization
cellular_component	GO:0005618	cell wall
cellular_component	GO:0005576	extracellular region
cellular_component	GO:0016020	membrane
molecular_function	GO:0003674	molecular_function

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
CsGy5G013540.1	CsGy5G013540.1	mRNA

InterPro

Analysis Name: InterPro Annotations of cucumber Gy14 genome (v2)
Date Performed: 2018-09-25


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR007118	Expansin/Lol pI	PRINTS	PR01225	EXPANSNFAMLY	coord: 249..263 score: 55.0 coord: 211..225 score: 58.33 coord: 60..78 score: 58.16 coord: 42..57 score: 38.75 coord: 82..100 score: 49.34 coord: 157..173 score: 52.21
IPR002963	Expansin	PRINTS	PR01226	EXPANSIN	coord: 132..149 score: 56.67 coord: 173..185 score: 45.64 coord: 73..87 score: 52.67 coord: 220..241 score: 61.21 coord: 185..206 score: 56.67 coord: 113..123 score: 67.58 coord: 149..162 score: 51.67 coord: 249..265 score: 62.35 coord: 100..111 score: 47.5
IPR007112	Expansin/pollen allergen, DPBB domain	SMART	SM00837	dpbb_1	coord: 78..164 e-value: 2.6E-36 score: 136.7
IPR007112	Expansin/pollen allergen, DPBB domain	PROSITE	PS50842	EXPANSIN_EG45	coord: 61..174 score: 27.113
IPR036749	Expansin, cellulose-binding-like domain superfamily	GENE3D	G3DSA:2.60.40.760		coord: 175..266 e-value: 2.7E-23 score: 83.8
IPR036749	Expansin, cellulose-binding-like domain superfamily	SUPERFAMILY	SSF49590	PHL pollen allergen	coord: 171..263
IPR009009	RlpA-like protein, double-psi beta-barrel domain	PFAM	PF03330	DPBB_1	coord: 79..164 e-value: 1.2E-18 score: 67.1
IPR036908	RlpA-like domain superfamily	GENE3D	G3DSA:2.40.40.10		coord: 28..170 e-value: 5.5E-36 score: 125.7
IPR036908	RlpA-like domain superfamily	SUPERFAMILY	SSF50685	Barwin-like endoglucanases	coord: 42..192
IPR007117	Expansin, cellulose-binding-like domain	PFAM	PF01357	Pollen_allerg_1	coord: 175..252 e-value: 1.6E-24 score: 85.7
IPR007117	Expansin, cellulose-binding-like domain	PROSITE	PS50843	EXPANSIN_CBD	coord: 184..263 score: 22.639
None	No IPR available	PANTHER	PTHR31867	FAMILY NOT NAMED	coord: 8..268
None	No IPR available	PANTHER	PTHR31867:SF3	EXPANSIN-A13	coord: 8..268

Synteny

The following gene(s) are orthologous to this gene:


Gene	Orthologue	Organism	Block
CsGy5G013540	Cla009129	Watermelon (97103) v1	cgybwmB385
CsGy5G013540	Csa5G332530	Cucumber (Chinese Long) v2	cgybcuB223
CsGy5G013540	MELO3C025095	Melon (DHL92) v3.5.1	cgybmeB295
CsGy5G013540	ClCG01G008560	Watermelon (Charleston Gray)	cgybwcgB335
CsGy5G013540	CSPI05G13610	Wild cucumber (PI 183967)	cgybcpiB225
CsGy5G013540	CmaCh15G007650	Cucurbita maxima (Rimu)	cgybcmaB614
CsGy5G013540	CmaCh04G022710	Cucurbita maxima (Rimu)	cgybcmaB654
CsGy5G013540	CmoCh15G007950	Cucurbita moschata (Rifu)	cgybcmoB589
CsGy5G013540	CmoCh04G023760	Cucurbita moschata (Rifu)	cgybcmoB634
CsGy5G013540	Lsi09G008970	Bottle gourd (USVL1VR-Ls)	cgyblsiB297
CsGy5G013540	Cp4.1LG01g19750	Cucurbita pepo (Zucchini)	cgybcpeB632
CsGy5G013540	Cp4.1LG13g05540	Cucurbita pepo (Zucchini)	cgybcpeB603
CsGy5G013540	MELO3C025095.2	Melon (DHL92) v3.6.1	cgybmedB295
CsGy5G013540	CsaV3_5G020530	Cucumber (Chinese Long) v3	cgybcucB232
CsGy5G013540	Cla97C01G008840	Watermelon (97103) v2	cgybwmbB322
CsGy5G013540	Bhi12G001036	Wax gourd	cgybwgoB417
CsGy5G013540	Carg18291	Silver-seed gourd	carcgybB0534
CsGy5G013540	Carg01438	Silver-seed gourd	carcgybB0818

The following gene(s) are paralogous to this gene:

None

The following block(s) are covering this gene:


Gene	Organism	Block
CsGy5G013540	Cucurbita maxima (Rimu)	cgybcmaB603
CsGy5G013540	Cucurbita moschata (Rifu)	cgybcmoB577
CsGy5G013540	Melon (DHL92) v3.5.1	cgybmeB304
CsGy5G013540	Melon (DHL92) v3.6.1	cgybmedB304
CsGy5G013540	Silver-seed gourd	carcgybB0820