Csa5G332530 (gene) Cucumber (Chinese Long) v2

Overview
NameCsa5G332530
Typegene
OrganismCucumis. sativus (Cucumber (Chinese Long) v2)
DescriptionExpansin; contains IPR007118 (Expansin/Lol pI)
LocationChr5 : 13161882 .. 13162602 (-)
Genome Viewer
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: CDSthree_prime_UTR
Hold the cursor over a type above to highlight its positions in the sequence below.
ATGACCAAATGGGGCCTTTATTTTTTCTTTAAAAATAGCACATTAGCAACATATAATTTGGTGTATCGTATTGCCTCTGCTCCATCTTCCTAAATCAGTGAGTCTCAACCTCTGTTGATATGATTACTGCAGGATCAAATGCCGAAAGGAAGGGGGTATTCGATATACAGTTTCTGGGTATGGCATTTATCTCTCAGTGTTGATAAGTAACGTTGCGGGCGCTGGAGATGTGAGTGCTGTAAAGATCAAGGGCACGAGAACTGGTTGGCTTCCGATGGGTCGTAACTGGGGGCAAAACTGGCACATTAATGCTGATTTGAACCATCAAGCCCTTTCGTTTGAAGTCACTAGCAGTGATGGAGTAACAATTACATCCTACAATGTTGCTCCAAAGGATTGGAACTTTGGGCAGACTTTTGAAGGCAAACAATTTGAATCTTGAAATTTTCCACTCTTGTAATTTTTGTCTGTAAAAGTTTTTAATTAGTTTCTATTTTCTATAATTCCATTAGGCATTTACAAAAGGGTTTTTCTTCTTCTTTATTTCGGGTGCTTAATTTATCCCCTTTTTTCTTAACCGAAGGGTAATAGGTTTTGAGTTTCATATCTTCATCATCAATTGTACAAGAACAGTGCTCAACTCGAGAGGTTTTGGATGGTATTTGTGAAGGATAGGCGTACGGAAATTCAATCTAAATTATATTATTAAGGGTTTTCTCTT

mRNA sequence

ATGACCAAATGGGGCCTTTATTTTTTCTTTAAAAATAGCACATTAGCAACATATAATTTGGTGATCAAATGCCGAAAGGAAGGGGGTATTCGATATACAGTTTCTGGGTATGGCATTTATCTCTCAGTGTTGATAAGTAACGTTGCGGGCGCTGGAGATGTGAGTGCTGTAAAGATCAAGGGCACGAGAACTGGTTGGCTTCCGATGGGTCGTAACTGGGGGCAAAACTGGCACATTAATGCTGATTTGAACCATCAAGCCCTTTCGTTTGAAGTCACTAGCAGTGATGGAGTAACAATTACATCCTACAATGTTGCTCCAAAGGATTGGAACTTTGGGCAGACTTTTGAAGGCAAACAATTTGAATCTTGA

Coding sequence (CDS)

ATGACCAAATGGGGCCTTTATTTTTTCTTTAAAAATAGCACATTAGCAACATATAATTTGGTGATCAAATGCCGAAAGGAAGGGGGTATTCGATATACAGTTTCTGGGTATGGCATTTATCTCTCAGTGTTGATAAGTAACGTTGCGGGCGCTGGAGATGTGAGTGCTGTAAAGATCAAGGGCACGAGAACTGGTTGGCTTCCGATGGGTCGTAACTGGGGGCAAAACTGGCACATTAATGCTGATTTGAACCATCAAGCCCTTTCGTTTGAAGTCACTAGCAGTGATGGAGTAACAATTACATCCTACAATGTTGCTCCAAAGGATTGGAACTTTGGGCAGACTTTTGAAGGCAAACAATTTGAATCTTGA

Protein sequence

MTKWGLYFFFKNSTLATYNLVIKCRKEGGIRYTVSGYGIYLSVLISNVAGAGDVSAVKIKGTRTGWLPMGRNWGQNWHINADLNHQALSFEVTSSDGVTITSYNVAPKDWNFGQTFEGKQFES*
Homology
[Close]
BLAST of Csa5G332530 vs. Swiss-Prot
Match: EXP13_ARATH (Expansin-A13 OS=Arabidopsis thaliana GN=EXPA13 PE=2 SV=2)

HSP 1 Score: 179.9 bits (455), Expect = 1.7e-44
Identity = 80/102 (78.43%), Postives = 93/102 (91.18%), Query Frame = 1 

Query: 22  IKCRKEGGIRYTVSGYGIYLSVLISNVAGAGDVSAVKIKGTRTGWLPMGRNWGQNWHINA 81
           I CRKEG +R+TV G GI++SVLI+NVAG+GD++AVKIKG+RTGWLPMGRNWGQNWHINA
Sbjct: 164 INCRKEGSMRFTVDGGGIFISVLITNVAGSGDIAAVKIKGSRTGWLPMGRNWGQNWHINA 223

Query: 82  DLNHQALSFEVTSSDGVTITSYNVAPKDWNFGQTFEGKQFES 124
           DL +QALSFEVTSSD  T+TSYNV+PK+WN+GQTFEGKQFE+
Sbjct: 224 DLRNQALSFEVTSSDRSTVTSYNVSPKNWNYGQTFEGKQFET 265

[Close]
BLAST of Csa5G332530 vs. Swiss-Prot
Match: EXP10_ORYSJ (Expansin-A10 OS=Oryza sativa subsp. japonica GN=EXPA10 PE=2 SV=2)

HSP 1 Score: 149.4 bits (376), Expect = 2.5e-35
Identity = 64/100 (64.00%), Postives = 80/100 (80.00%), Query Frame = 1 

Query: 22  IKCRKEGGIRYTVSGYGIYLSVLISNVAGAGDVSAVKIKGTRTGWLPMGRNWGQNWHINA 81
           + C ++GG+R+ V+G   +L+VLISNV GAGDV +VKIKGT +GWL MGRNWGQ WHIN+
Sbjct: 156 VNCLRDGGVRFAVAGRSFFLTVLISNVGGAGDVRSVKIKGTESGWLSMGRNWGQIWHINS 215

Query: 82  DLNHQALSFEVTSSDGVTITSYNVAPKDWNFGQTFEGKQF 122
           D   Q LSFE+TSSDG T+T+YNV PK+W+FG+T+ GKQF
Sbjct: 216 DFRGQPLSFELTSSDGKTLTNYNVVPKEWDFGKTYTGKQF 255

[Close]
BLAST of Csa5G332530 vs. Swiss-Prot
Match: EXP16_ORYSJ (Expansin-A16 OS=Oryza sativa subsp. japonica GN=EXPA16 PE=2 SV=1)

HSP 1 Score: 140.2 bits (352), Expect = 1.5e-32
Identity = 61/100 (61.00%), Postives = 76/100 (76.00%), Query Frame = 1 

Query: 22  IKCRKEGGIRYTVSGYGIYLSVLISNVAGAGDVSAVKIKGTRTGWLPMGRNWGQNWHINA 81
           + C + GG+R+T++G   +L VLI+NVA  G+V+AVK+KG+RTGW+PMGRNWGQNW  +A
Sbjct: 159 VSCDRAGGMRFTITGGASFLQVLITNVAADGEVAAVKVKGSRTGWIPMGRNWGQNWQCDA 218

Query: 82  DLNHQALSFEVTSSDGVTITSYNVAPKDWNFGQTFEGKQF 122
           DL  Q LSFEVT   G T+ +Y+VAP DW F QTFEGKQF
Sbjct: 219 DLRGQPLSFEVTGGRGRTVVAYSVAPPDWMFAQTFEGKQF 258

[Close]
BLAST of Csa5G332530 vs. Swiss-Prot
Match: EXPA4_ORYSJ (Expansin-A4 OS=Oryza sativa subsp. japonica GN=EXPA4 PE=2 SV=1)

HSP 1 Score: 138.7 bits (348), Expect = 4.4e-32
Identity = 63/100 (63.00%), Postives = 77/100 (77.00%), Query Frame = 1 

Query: 22  IKCRKEGGIRYTVSGYGIYLSVLISNVAGAGDVSAVKIKGTRTGWLPMGRNWGQNWHINA 81
           + C K+GG+R+TV+G+  +  VL++NVAGAGDV +V IKG+RTGW PM RNWGQNW  NA
Sbjct: 147 VPCVKKGGVRFTVNGHSYFNLVLVTNVAGAGDVRSVSIKGSRTGWQPMSRNWGQNWQSNA 206

Query: 82  DLNHQALSFEVTSSDGVTITSYNVAPKDWNFGQTFEGKQF 122
            L+ Q+LSF+VT+SDG T+TS NVA   W FGQTFEG QF
Sbjct: 207 FLDGQSLSFQVTASDGRTVTSNNVAHPGWQFGQTFEGGQF 246

[Close]
BLAST of Csa5G332530 vs. Swiss-Prot
Match: EXPA4_ORYSI (Expansin-A4 OS=Oryza sativa subsp. indica GN=EXPA4 PE=2 SV=1)

HSP 1 Score: 138.7 bits (348), Expect = 4.4e-32
Identity = 63/100 (63.00%), Postives = 77/100 (77.00%), Query Frame = 1 

Query: 22  IKCRKEGGIRYTVSGYGIYLSVLISNVAGAGDVSAVKIKGTRTGWLPMGRNWGQNWHINA 81
           + C K+GG+R+TV+G+  +  VL++NVAGAGDV +V IKG+RTGW PM RNWGQNW  NA
Sbjct: 147 VPCVKKGGVRFTVNGHSYFNLVLVTNVAGAGDVRSVSIKGSRTGWQPMSRNWGQNWQSNA 206

Query: 82  DLNHQALSFEVTSSDGVTITSYNVAPKDWNFGQTFEGKQF 122
            L+ Q+LSF+VT+SDG T+TS NVA   W FGQTFEG QF
Sbjct: 207 FLDGQSLSFQVTASDGRTVTSNNVAHPGWQFGQTFEGGQF 246

[Close]
BLAST of Csa5G332530 vs. TrEMBL
Match: A0A0A0KT71_CUCSA (Uncharacterized protein OS=Cucumis sativus GN=Csa_5G332530 PE=3 SV=1)

HSP 1 Score: 260.4 bits (664), Expect = 1.1e-66
Identity = 123/123 (100.00%), Postives = 123/123 (100.00%), Query Frame = 1 

Query: 1   MTKWGLYFFFKNSTLATYNLVIKCRKEGGIRYTVSGYGIYLSVLISNVAGAGDVSAVKIK 60
           MTKWGLYFFFKNSTLATYNLVIKCRKEGGIRYTVSGYGIYLSVLISNVAGAGDVSAVKIK
Sbjct: 1   MTKWGLYFFFKNSTLATYNLVIKCRKEGGIRYTVSGYGIYLSVLISNVAGAGDVSAVKIK 60

Query: 61  GTRTGWLPMGRNWGQNWHINADLNHQALSFEVTSSDGVTITSYNVAPKDWNFGQTFEGKQ 120
           GTRTGWLPMGRNWGQNWHINADLNHQALSFEVTSSDGVTITSYNVAPKDWNFGQTFEGKQ
Sbjct: 61  GTRTGWLPMGRNWGQNWHINADLNHQALSFEVTSSDGVTITSYNVAPKDWNFGQTFEGKQ 120

Query: 121 FES 124
           FES
Sbjct: 121 FES 123

[Close]
BLAST of Csa5G332530 vs. TrEMBL
Match: A0A067KHR0_JATCU (Uncharacterized protein OS=Jatropha curcas GN=JCGZ_10508 PE=4 SV=1)

HSP 1 Score: 189.9 bits (481), Expect = 1.9e-45
Identity = 88/102 (86.27%), Postives = 97/102 (95.10%), Query Frame = 1 

Query: 22  IKCRKEGGIRYTVSGYGIYLSVLISNVAGAGDVSAVKIKGTRTGWLPMGRNWGQNWHINA 81
           IKCRKEGG+R+TVSG G ++SVLISNVAGAGDV+AVKIKG+RTGWL MGRNWGQNWHINA
Sbjct: 180 IKCRKEGGMRFTVSGSGNFISVLISNVAGAGDVTAVKIKGSRTGWLQMGRNWGQNWHINA 239

Query: 82  DLNHQALSFEVTSSDGVTITSYNVAPKDWNFGQTFEGKQFES 124
           DL +Q LSFEVTSSDG+TITSYNVAPKDWNFGQTFEGKQFE+
Sbjct: 240 DLKNQPLSFEVTSSDGLTITSYNVAPKDWNFGQTFEGKQFET 281

[Close]
BLAST of Csa5G332530 vs. TrEMBL
Match: B9SKR9_RICCO (Alpha-expansin 13, putative OS=Ricinus communis GN=RCOM_1604370 PE=4 SV=1)

HSP 1 Score: 189.9 bits (481), Expect = 1.9e-45
Identity = 88/100 (88.00%), Postives = 95/100 (95.00%), Query Frame = 1 

Query: 22  IKCRKEGGIRYTVSGYGIYLSVLISNVAGAGDVSAVKIKGTRTGWLPMGRNWGQNWHINA 81
           IKCRKEGGIR+TVSG  I++SVLISNVAGAGDV AVKIKG+RTGWLPMGRNWGQNWHINA
Sbjct: 168 IKCRKEGGIRFTVSGSTIFISVLISNVAGAGDVVAVKIKGSRTGWLPMGRNWGQNWHINA 227

Query: 82  DLNHQALSFEVTSSDGVTITSYNVAPKDWNFGQTFEGKQF 122
           DL +Q LSFEVTSSDG+T+TSYNVAPKDWNFGQTFEGKQF
Sbjct: 228 DLKNQPLSFEVTSSDGLTVTSYNVAPKDWNFGQTFEGKQF 267

[Close]
BLAST of Csa5G332530 vs. TrEMBL
Match: W9REN4_9ROSA (Uncharacterized protein OS=Morus notabilis GN=L484_007788 PE=4 SV=1)

HSP 1 Score: 188.3 bits (477), Expect = 5.4e-45
Identity = 83/102 (81.37%), Postives = 96/102 (94.12%), Query Frame = 1 

Query: 22  IKCRKEGGIRYTVSGYGIYLSVLISNVAGAGDVSAVKIKGTRTGWLPMGRNWGQNWHINA 81
           IKCRKEGGIR+T+ G GI++SVLISNVAG GDV+AVK+KG+RTGWLPMGRNWGQNWH+NA
Sbjct: 169 IKCRKEGGIRFTIDGEGIFISVLISNVAGVGDVTAVKVKGSRTGWLPMGRNWGQNWHVNA 228

Query: 82  DLNHQALSFEVTSSDGVTITSYNVAPKDWNFGQTFEGKQFES 124
           DL HQ LSFEVTSSD VT+TS+NVAPK+WNFGQ+FEGKQF+S
Sbjct: 229 DLKHQPLSFEVTSSDDVTVTSFNVAPKNWNFGQSFEGKQFDS 270

[Close]
BLAST of Csa5G332530 vs. TrEMBL
Match: A0A059BU64_EUCGR (Uncharacterized protein OS=Eucalyptus grandis GN=EUGRSUZ_F02908 PE=4 SV=1)

HSP 1 Score: 188.0 bits (476), Expect = 7.1e-45
Identity = 85/102 (83.33%), Postives = 96/102 (94.12%), Query Frame = 1 

Query: 22  IKCRKEGGIRYTVSGYGIYLSVLISNVAGAGDVSAVKIKGTRTGWLPMGRNWGQNWHINA 81
           IKCRKEGGIR+TV G GI++SVLI NVAGAGD++A+KIKG++TGWLPMGRNWGQNWHINA
Sbjct: 167 IKCRKEGGIRFTVDGSGIFISVLIRNVAGAGDIAAIKIKGSKTGWLPMGRNWGQNWHINA 226

Query: 82  DLNHQALSFEVTSSDGVTITSYNVAPKDWNFGQTFEGKQFES 124
           DL +Q LSFEVTSSDGVT+TSYNVAPK+W FGQTFEGKQFES
Sbjct: 227 DLRNQPLSFEVTSSDGVTVTSYNVAPKNWIFGQTFEGKQFES 268

[Close]
BLAST of Csa5G332530 vs. TAIR10
Match: AT3G03220.1 (AT3G03220.1 expansin A13)

HSP 1 Score: 179.9 bits (455), Expect = 9.8e-46
Identity = 80/102 (78.43%), Postives = 93/102 (91.18%), Query Frame = 1 

Query: 22  IKCRKEGGIRYTVSGYGIYLSVLISNVAGAGDVSAVKIKGTRTGWLPMGRNWGQNWHINA 81
           I CRKEG +R+TV G GI++SVLI+NVAG+GD++AVKIKG+RTGWLPMGRNWGQNWHINA
Sbjct: 164 INCRKEGSMRFTVDGGGIFISVLITNVAGSGDIAAVKIKGSRTGWLPMGRNWGQNWHINA 223

Query: 82  DLNHQALSFEVTSSDGVTITSYNVAPKDWNFGQTFEGKQFES 124
           DL +QALSFEVTSSD  T+TSYNV+PK+WN+GQTFEGKQFE+
Sbjct: 224 DLRNQALSFEVTSSDRSTVTSYNVSPKNWNYGQTFEGKQFET 265

[Close]
BLAST of Csa5G332530 vs. TAIR10
Match: AT5G56320.1 (AT5G56320.1 expansin A14)

HSP 1 Score: 135.6 bits (340), Expect = 2.1e-32
Identity = 60/102 (58.82%), Postives = 77/102 (75.49%), Query Frame = 1 

Query: 22  IKCRKEGGIRYTVSGYGIYLSVLISNVAGAGDVSAVKIKGTRTGWLPMGRNWGQNWHINA 81
           + CR++GGIR+T++G+  +  VLI+NVAGAGDV +V IKGT T W  M RNWGQNW  NA
Sbjct: 152 VACRRKGGIRFTINGHSYFNLVLITNVAGAGDVISVSIKGTNTRWQSMSRNWGQNWQSNA 211

Query: 82  DLNHQALSFEVTSSDGVTITSYNVAPKDWNFGQTFEGKQFES 124
            L+ QALSF+VT+SDG T+ S N  P++W+FGQT+ GKQF +
Sbjct: 212 KLDGQALSFKVTTSDGRTVISNNATPRNWSFGQTYTGKQFRA 253

[Close]
BLAST of Csa5G332530 vs. TAIR10
Match: AT3G55500.1 (AT3G55500.1 expansin A16)

HSP 1 Score: 131.7 bits (330), Expect = 3.1e-31
Identity = 58/100 (58.00%), Postives = 74/100 (74.00%), Query Frame = 1 

Query: 22  IKCRKEGGIRYTVSGYGIYLSVLISNVAGAGDVSAVKIKGTRTGWLPMGRNWGQNWHINA 81
           + CRK GGIR+T++G+  +  VLI+NVAGAGD++   +KG++TGW+ + RNWGQNW  NA
Sbjct: 159 VACRKSGGIRFTINGHRYFNLVLITNVAGAGDIARTSVKGSKTGWMSLTRNWGQNWQSNA 218

Query: 82  DLNHQALSFEVTSSDGVTITSYNVAPKDWNFGQTFEGKQF 122
            L  Q+LSF VTSSD  T TS+N+AP +W FGQTF GK F
Sbjct: 219 VLVGQSLSFRVTSSDRRTSTSWNIAPSNWQFGQTFVGKNF 258

[Close]
BLAST of Csa5G332530 vs. TAIR10
Match: AT1G26770.2 (AT1G26770.2 expansin A10)

HSP 1 Score: 131.0 bits (328), Expect = 5.2e-31
Identity = 58/100 (58.00%), Postives = 73/100 (73.00%), Query Frame = 1 

Query: 22  IKCRKEGGIRYTVSGYGIYLSVLISNVAGAGDVSAVKIKGTRTGWLPMGRNWGQNWHINA 81
           + CR+ GGIR+T++G+  +  VLI+NV GAGDV +  IKG+RT W  M RNWGQNW  N+
Sbjct: 159 VPCRRRGGIRFTINGHSYFNLVLITNVGGAGDVHSAAIKGSRTVWQAMSRNWGQNWQSNS 218

Query: 82  DLNHQALSFEVTSSDGVTITSYNVAPKDWNFGQTFEGKQF 122
            LN QALSF+VT+SDG T+ S+N AP  W++GQTF G QF
Sbjct: 219 YLNGQALSFKVTTSDGRTVVSFNAAPAGWSYGQTFAGGQF 258

[Close]
BLAST of Csa5G332530 vs. TAIR10
Match: AT2G03090.1 (AT2G03090.1 expansin A15)

HSP 1 Score: 130.6 bits (327), Expect = 6.8e-31
Identity = 57/100 (57.00%), Postives = 73/100 (73.00%), Query Frame = 1 

Query: 22  IKCRKEGGIRYTVSGYGIYLSVLISNVAGAGDVSAVKIKGTRTGWLPMGRNWGQNWHINA 81
           + C + GGIR+T++G+  +  VL++NV GAGDV +V +KG+RT W  M RNWGQNW  N 
Sbjct: 153 VPCMRRGGIRFTINGHSYFNLVLVTNVGGAGDVHSVAVKGSRTRWQQMSRNWGQNWQSNN 212

Query: 82  DLNHQALSFEVTSSDGVTITSYNVAPKDWNFGQTFEGKQF 122
            LN QALSF+VT+SDG T+ S N+AP  W+FGQTF G+QF
Sbjct: 213 LLNGQALSFKVTASDGRTVVSNNIAPASWSFGQTFTGRQF 252

[Close]
BLAST of Csa5G332530 vs. NCBI nr
Match: gi|700195744|gb|KGN50921.1| (hypothetical protein Csa_5G332530 [Cucumis sativus])

HSP 1 Score: 260.4 bits (664), Expect = 1.6e-66
Identity = 123/123 (100.00%), Postives = 123/123 (100.00%), Query Frame = 1 

Query: 1   MTKWGLYFFFKNSTLATYNLVIKCRKEGGIRYTVSGYGIYLSVLISNVAGAGDVSAVKIK 60
           MTKWGLYFFFKNSTLATYNLVIKCRKEGGIRYTVSGYGIYLSVLISNVAGAGDVSAVKIK
Sbjct: 1   MTKWGLYFFFKNSTLATYNLVIKCRKEGGIRYTVSGYGIYLSVLISNVAGAGDVSAVKIK 60

Query: 61  GTRTGWLPMGRNWGQNWHINADLNHQALSFEVTSSDGVTITSYNVAPKDWNFGQTFEGKQ 120
           GTRTGWLPMGRNWGQNWHINADLNHQALSFEVTSSDGVTITSYNVAPKDWNFGQTFEGKQ
Sbjct: 61  GTRTGWLPMGRNWGQNWHINADLNHQALSFEVTSSDGVTITSYNVAPKDWNFGQTFEGKQ 120

Query: 121 FES 124
           FES
Sbjct: 121 FES 123

[Close]
BLAST of Csa5G332530 vs. NCBI nr
Match: gi|449462354|ref|XP_004148906.1| (PREDICTED: expansin-A13 [Cucumis sativus])

HSP 1 Score: 216.1 bits (549), Expect = 3.5e-53
Identity = 102/102 (100.00%), Postives = 102/102 (100.00%), Query Frame = 1 

Query: 22  IKCRKEGGIRYTVSGYGIYLSVLISNVAGAGDVSAVKIKGTRTGWLPMGRNWGQNWHINA 81
           IKCRKEGGIRYTVSGYGIYLSVLISNVAGAGDVSAVKIKGTRTGWLPMGRNWGQNWHINA
Sbjct: 167 IKCRKEGGIRYTVSGYGIYLSVLISNVAGAGDVSAVKIKGTRTGWLPMGRNWGQNWHINA 226

Query: 82  DLNHQALSFEVTSSDGVTITSYNVAPKDWNFGQTFEGKQFES 124
           DLNHQALSFEVTSSDGVTITSYNVAPKDWNFGQTFEGKQFES
Sbjct: 227 DLNHQALSFEVTSSDGVTITSYNVAPKDWNFGQTFEGKQFES 268

[Close]
BLAST of Csa5G332530 vs. NCBI nr
Match: gi|659126398|ref|XP_008463163.1| (PREDICTED: expansin-A13 [Cucumis melo])

HSP 1 Score: 214.5 bits (545), Expect = 1.0e-52
Identity = 101/102 (99.02%), Postives = 102/102 (100.00%), Query Frame = 1 

Query: 22  IKCRKEGGIRYTVSGYGIYLSVLISNVAGAGDVSAVKIKGTRTGWLPMGRNWGQNWHINA 81
           IKCRKEGGIRYTVSGYGIYLSVLISNVAGAGDVSAVKIKGTRTGWLPMGRNWGQNWHINA
Sbjct: 167 IKCRKEGGIRYTVSGYGIYLSVLISNVAGAGDVSAVKIKGTRTGWLPMGRNWGQNWHINA 226

Query: 82  DLNHQALSFEVTSSDGVTITSYNVAPKDWNFGQTFEGKQFES 124
           DLNHQALSFEVTSSDGVTI+SYNVAPKDWNFGQTFEGKQFES
Sbjct: 227 DLNHQALSFEVTSSDGVTISSYNVAPKDWNFGQTFEGKQFES 268

[Close]
BLAST of Csa5G332530 vs. NCBI nr
Match: gi|747080955|ref|XP_011087744.1| (PREDICTED: expansin-A13 [Sesamum indicum])

HSP 1 Score: 191.4 bits (485), Expect = 9.2e-46
Identity = 88/114 (77.19%), Postives = 101/114 (88.60%), Query Frame = 1 

Query: 10  FKNSTLATYNLVIKCRKEGGIRYTVSGYGIYLSVLISNVAGAGDVSAVKIKGTRTGWLPM 69
           +K S +      I+CRKEGG+R+T+ G GI+LSVLISNVAGAGDV+AVKIKG+RTGWLPM
Sbjct: 189 WKASNMPVQYRRIRCRKEGGVRFTIGGAGIFLSVLISNVAGAGDVAAVKIKGSRTGWLPM 248

Query: 70  GRNWGQNWHINADLNHQALSFEVTSSDGVTITSYNVAPKDWNFGQTFEGKQFES 124
           GRNWGQNWHINADL +Q LSFE+TSSDGVT+TSYNVAPK+W FGQTFEGKQFES
Sbjct: 249 GRNWGQNWHINADLKNQPLSFEITSSDGVTLTSYNVAPKNWEFGQTFEGKQFES 302

[Close]
BLAST of Csa5G332530 vs. NCBI nr
Match: gi|1009141264|ref|XP_015888102.1| (PREDICTED: expansin-A13 [Ziziphus jujuba])

HSP 1 Score: 190.7 bits (483), Expect = 1.6e-45
Identity = 87/102 (85.29%), Postives = 96/102 (94.12%), Query Frame = 1 

Query: 22  IKCRKEGGIRYTVSGYGIYLSVLISNVAGAGDVSAVKIKGTRTGWLPMGRNWGQNWHINA 81
           IKCRKEGGIRYT+SG GI++SVLISNVAGAGD+ AVK+KG+RTGWLPMGRNWGQNWHINA
Sbjct: 92  IKCRKEGGIRYTISGSGIFMSVLISNVAGAGDIVAVKVKGSRTGWLPMGRNWGQNWHINA 151

Query: 82  DLNHQALSFEVTSSDGVTITSYNVAPKDWNFGQTFEGKQFES 124
           DL +Q LSFEVTSSDGVTITSYNVAPK W++GQTFE KQFES
Sbjct: 152 DLRNQPLSFEVTSSDGVTITSYNVAPKSWSYGQTFESKQFES 193

The following BLAST results are available for this feature:
BLAST of Csa5G332530 vs. Swiss-Prot
Match NameE-valueIdentityDescription
EXP13_ARATH1.7e-4478.43Expansin-A13 OS=Arabidopsis thaliana GN=EXPA13 PE=2 SV=2[more]
EXP10_ORYSJ2.5e-3564.00Expansin-A10 OS=Oryza sativa subsp. japonica GN=EXPA10 PE=2 SV=2[more]
EXP16_ORYSJ1.5e-3261.00Expansin-A16 OS=Oryza sativa subsp. japonica GN=EXPA16 PE=2 SV=1[more]
EXPA4_ORYSJ4.4e-3263.00Expansin-A4 OS=Oryza sativa subsp. japonica GN=EXPA4 PE=2 SV=1[more]
EXPA4_ORYSI4.4e-3263.00Expansin-A4 OS=Oryza sativa subsp. indica GN=EXPA4 PE=2 SV=1[more]
BLAST of Csa5G332530 vs. TrEMBL
Match NameE-valueIdentityDescription
A0A0A0KT71_CUCSA1.1e-66100.00Uncharacterized protein OS=Cucumis sativus GN=Csa_5G332530 PE=3 SV=1[more]
A0A067KHR0_JATCU1.9e-4586.27Uncharacterized protein OS=Jatropha curcas GN=JCGZ_10508 PE=4 SV=1[more]
B9SKR9_RICCO1.9e-4588.00Alpha-expansin 13, putative OS=Ricinus communis GN=RCOM_1604370 PE=4 SV=1[more]
W9REN4_9ROSA5.4e-4581.37Uncharacterized protein OS=Morus notabilis GN=L484_007788 PE=4 SV=1[more]
A0A059BU64_EUCGR7.1e-4583.33Uncharacterized protein OS=Eucalyptus grandis GN=EUGRSUZ_F02908 PE=4 SV=1[more]
BLAST of Csa5G332530 vs. TAIR10
Match NameE-valueIdentityDescription
AT3G03220.19.8e-4678.43 expansin A13[more]
AT5G56320.12.1e-3258.82 expansin A14[more]
AT3G55500.13.1e-3158.00 expansin A16[more]
AT1G26770.25.2e-3158.00 expansin A10[more]
AT2G03090.16.8e-3157.00 expansin A15[more]
BLAST of Csa5G332530 vs. NCBI nr
Match NameE-valueIdentityDescription
gi|700195744|gb|KGN50921.1|1.6e-66100.00hypothetical protein Csa_5G332530 [Cucumis sativus][more]
gi|449462354|ref|XP_004148906.1|3.5e-53100.00PREDICTED: expansin-A13 [Cucumis sativus][more]
gi|659126398|ref|XP_008463163.1|1.0e-5299.02PREDICTED: expansin-A13 [Cucumis melo][more]
gi|747080955|ref|XP_011087744.1|9.2e-4677.19PREDICTED: expansin-A13 [Sesamum indicum][more]
gi|1009141264|ref|XP_015888102.1|1.6e-4585.29PREDICTED: expansin-A13 [Ziziphus jujuba][more]
Annotated Terms
The following terms have been associated with this gene:
Vocabulary: INTERPRO
TermDefinition
IPR002963Expansin
IPR007117Expansin_CBD
IPR007118Expan_Lol_pI
Vocabulary: Biological Process
TermDefinition
GO:0009664plant-type cell wall organization
Vocabulary: Cellular Component
TermDefinition
GO:0005576extracellular region
GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
Category Term Accession Term Name
biological_process GO:0009664 plant-type cell wall organization
cellular_component GO:0005618 cell wall
cellular_component GO:0005576 extracellular region
cellular_component GO:0016020 membrane
molecular_function GO:0003674 molecular_function
Unigene
This gene is associated with the following unigenes:
Unigene NameAnalysis NameSequence type in Unigene
CU106740cucumber EST collection version 3.0transcribed_cluster
CU124257cucumber EST collection version 3.0transcribed_cluster
Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
Csa5G332530.1Csa5G332530.1mRNA


The following transcribed_cluster feature(s) are associated with this gene:

Feature NameUnique NameType
CU106740CU106740transcribed_cluster
CU124257CU124257transcribed_cluster


InterPro
Analysis Name: InterPro Annotations of cucumber (Chinese Long)
Date Performed: 2016-09-28
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR002963ExpansinPRINTSPR01226EXPANSINcoord: 40..61
score: 7.9E-29coord: 104..120
score: 7.9E-29coord: 28..40
score: 7.9E-29coord: 75..96
score: 7.9
IPR007117Expansin, cellulose-binding-like domainGENE3DG3DSA:2.60.40.760coord: 22..120
score: 1.3
IPR007117Expansin, cellulose-binding-like domainPFAMPF01357Pollen_allerg_1coord: 30..107
score: 2.4
IPR007117Expansin, cellulose-binding-like domainPROFILEPS50843EXPANSIN_CBDcoord: 39..118
score: 22
IPR007117Expansin, cellulose-binding-like domainunknownSSF49590PHL pollen allergencoord: 26..118
score: 1.57
IPR007118Expansin/Lol pIPRINTSPR01225EXPANSNFAMLYcoord: 104..118
score: 3.2E-7coord: 66..80
score: 3.
NoneNo IPR availablePANTHERPTHR31867FAMILY NOT NAMEDcoord: 22..123
score: 7.4
NoneNo IPR availablePANTHERPTHR31867:SF3EXPANSIN-A13coord: 22..123
score: 7.4