CsGy5G012690 (gene) Cucumber (Gy14) v2 | Cucurbit Genomics Database (CuGenDB)

Overview


Name	CsGy5G012690
Type	gene
Organism	Cucumis sativus (Cucumber (Gy14) v2)
Description	Uncharacterized protein
Location	Chr5 : 14986697 .. 14992180 (+)

Genome Viewer

Gene Expression

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonCDS

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGTTGGGACGACAATTTTGGCCTTACTTTTCAGGCAGTTTTGGCTTTGTTCATTACTCGTCCACTTCATCTCCTCCGCTTTTGACACATCTCTTTGGGGCTGCAGTCTTGATTAGCTTTGCAGTTTCATTTCCTGGAGTTTTCCTCCAAGATGGATTCCCGAGAATCGCACTTCTGTTCGAAAAGATCGGTGCTCTTATTGCTGCAATTGGTGTGTGCATCCTAGCAAGTCTTCTAATCCATCAGAACTTTGCTTGGATCTCTTGGCTGGCTTGTGGCTTCTCCTTGATGGCTTTTTTGCTATCATTTAGAGGGTAGTTTCATCAGATTATTGGTTCTTTAGCTTGTTCAGTAAGATGTTAATATCATCTAAGAAACAAAGATGGCAGCATCAAGAAAGATGGGTCGTCTCTATGGTTCATACAAATATGGAGGAACCACATATTGGCTGAAGCTTAGTCATCCTAAAAAAAATACACAGATTTGGTAATTGGAAGTGGAATTGGAATGCCAATGCCGCAATGTTGTTATATTGTTAGCAAATATATATAAGTATGTTCTTCATCTATGTTAAATGGGGATATAAAATGGAAAAAATATGAGATCAATCTTTACAAGAACATTAGCAGGAAAGGAATTCTCCAGAGCTTAAAAGAAAAGTGTCCAACCTAAACCATATTAGAAAGTTAAAACAGAATTTCACTTTTTCGTCTCTATTTCTAACTCTTAACCATTTGAATGCAAATAAATGAGACGAATAACAAGAAAAGGAGAGATGTATATTGCAAAATGATCAAAAGGCCCGTGGGGAAAATTTCCCATCACTGCTGGAGAAATTAAAAGAAAACAATCAAACTAGAAACATAAGCATTAACTTAAAAAAAACTTCGAACCGTGAAAAAATTGTTACCGTCACATAGAAATCTCTTCTTGATCAATTAAAATAGCACTCTCTCGAAGCATTACATCACTTGCATAATTGAGCGTATATTACACTTAAATGCTTCGAATTGGGATGATTAGAAACCAAAGGTATAGACTCCTTAGACTAATAGATGCAAGACAATTGTACTTTTAATATTTTACAAAACTCAACAAGTTTCCTACGGAACATGAATTTTAGAGCTCCAGTATTTATTATTTCCCCAAAGTTATTAGGAAATATTCAAACTGATAGAGATAAACATTGTTCAGAAGAAGGAAATAGATTTAGAAAAAAGAAAAACAATAATGGTAACTTACCTTCAAATAGAAATCCAATCATATATATCTATGATCAAAACAGATGCAAACAGCAGAGCAATTAGAGAACTTTGAAGACTAGAATGATGTAGAATCCAAATAACAAATGTTGAGTTTACACTCATGTAGAGGCTGCCTAAATAAGCATGTGAATAATAAATAGGAAAAAGAAGCATTATTCATCCATGTAAACATCCACACTCATTTTAGAAACAGAAAAAAATCAAATTTTAATTACAGGACTAAACGAAAGTCCTAGGATTGGCACACATCTAAAAAGCAAAATCTAAACTAATGATGATATTAAGTGAGCTTGATGAAAGGGAAACAACAATCAGAGAACTTTAAAGGCTTGCACGAAATGGGTAAGCACATCATAGCTTCACCTCAAAAGGCCTCATCATCTCGAATGGCTATTTTACATACTTTACCAATAGAAAAGAGTGAGATCAACTAGTAAAATGTTTTCTAAAGATAGGTTACAAGAGGTCTTTAAAATCGAAGACATCGAGGAGACAAAACTTAACCAAAGACCAAACGGCAAACATCATCAATAAGGGCCTCCCCAACCCACTAAACACCCTGTTATTTCTGTCTCCTCAACCATGACAAAGTTGCAACTTAATAGTAGTCTGAAACTGGTTGGAAACCATTGACAGGCCACTTGAGTGTGTGGCAGCAATACCACTCTTCTATCTTAATGAACAGATCCATAGCTTTATGAAACCAATATTAAAAAACAAGAAAACATAAACAATAAAGAAATCGACACAAGGATTTACACAGTACATTAACAGTGGGTATTCAAGTGCAGAAGAAGAGAGTAGTATATTAATAGAGATTCAAGGCCTTCCAACAAATAGTATGGATATCAAATTGTAGGATCCACAGACCAGAGTGTAACATAACAACATCAAATGGGTTATAACTTATAAGCACAAGAAACTAAGAAAGAAAATGGCAGGGTGCCCTAAGTCAACCTAAAATTTGACATCACAAACTAAAAAGTTAGAACATAAACCATAAGAAACTCCACAATATGTTATTATCACGAGTAAGTCTTGACACAATTTTGCGATAATAGGCATTAAAAATACTTTTTCCAGCACAAGCAAGCCATTGTTTGTCGGAAGAATAGATGATCCAATATGGGATATCAATGACTAGTAACTAATTCGAACAACTTCTACTTCACCTGCATAGAAAAGGATCTATGACCTAAATAGTCTTCATGGGCTCTGAAATCCAATGATTTAGGTACCAACCGAGCAGTAAATCAAGGGCAATCCATGATATATACTCATGGGTTTAACTTTTAAGAACTTGGACAGCACGTTCAGGTTACTTGGGTCACATACATGGTTACAAAAATTGAGATTGTTGGTATACAAGATCTTGTGCTGGTGGCTGTTGATGACATATTGCCATGTCGGCTATTGTTCTTGTTTGTCTAAGTTGTATGGCGTCCAACGATTTATCTAACGTCAATAGATAAAGTTTTTCCTTGTAGGAGATGAGTTTTCTAGATTCTAGAGTTTAGGACATACTCATTTAACATTTTTGTCCCTTTTGTTTTGTTTTATTTTATTTTATTATAATCGATCACAATTTTAGCAATATTTTAAAAAATTGTAAATATTGCAAAATTATCGTTGATAGACTTAGATCAATCAATATTTGCAATATGGTCCATCCGTGATACACTCCTACCTTTAATAGAATTTGACAAATTTTGTTATATTTACAAATTTTTTTAAATGTTGCTACATACTCAATTAATTTGAATCTAATCGATAAATTTGCAACTATCTCATATAATTAAATAAATATTGACAATCACAAGTATCATTTTTTTTCTTATATTACAATTCTAGTTATTTTCAACCAGATATTCAAATTTAAGTTTAAGTTAATATTCTAGTAAAGTTGATGTTTTTAAACGGTTGGCATAAATGGTGTATGTATAAATTTAATAATGGGTTCAAATTGTTATCAATATGATAGAAAGACGATGTTAATAAATGATTAAGAGGTCATGAATTTAATCTTATATAACTTATTTAAAATTCAATATCTTATCGGTTTTCATACCTAGATATTGTACGAATTGTTCCATGAAATTAATTAAAAGTACTACTTGCTCAAATCTCACTTTGTCCCATAGCTACATATAAAGTCTGTGACACAATACTATCACGTACATGAAAGATTTATCACCGCTATGTTAAAATTCATACCTTACCTACCCTAAAATGATAAATTGGCTTATTTTTAGAAATAAATAAACTAATTAATGATGTTGATAACTACGTTAAAGTTTATTCGTAAACTATATATTATAAACTTGCACAATAGTATGTTGTTCATTTTGATCGATCTTCAAGGTTAACACAATTTTCCAACTCATACGTTCACATAGGAATGGAAATGGAATCAAAAGAAATTTTGCTGGAGAAAATCAAAATTTTAGAAAATGAAGAGAAGAACTCCCAACCTAATATAGTTTGTTGAGAAACTACCCTTAGAATCATCAAACATTTGCAATTATGTTCCATATTTGTGGCTTTCCAATGTATGAAAACTAATTGAAACTCCTCCATTAACCATCAAAAAGTTGGAGCGATAGGTGCGATTGACAAGGATGAATGTCAAATGAAAAGAAGAAAAACATACTAAATAGAAGAAAATATTGAGATGGAAGTACAAAGTCATCCATCTAAGTGACAAATAGGCATGTTAGAATTATTAGACATAGTTCTTTATTATCTCATGGTATATCATCTTTCTCGCTCCATTTTGACAATTGTATTATCGGTAGGAGATAATAGTTGCTATCACATCGGAACATAAATCGTAAAAAGGGTTCGTTTGGTAACTTTTCGTCTCCAATTTTGTTTCTATCTATGCTTTCTTTTATTTGAAAGTTTGTTTCATCTTATGGATTTGGTCATTTATTACAATTTATGATACATATCTAGAAAACAAAACTATATGAATATGGGATAAATTAATATTATTTTGATGTCTTAAATTTAGGCAAGGGTCTATTTATCACTTCAAAATTTGACTTCACATTCCGCCTAGGTTGACAGTCATGAAATGTCAGAAAATGAATAAAGTAATGTTGTTAGGTGGTAGTTGAGCTAAACTATTGTTAGCAAGTTTGACATACTTGATGACTAAAAATTATTCGACATATTATAGCTTTTAACTATAATAGTATATGTTTTTAGGTTGGCACCAACGCTACTATATTGATGGCCAAAAAGGGAAAAAAATCAACCACAAATAAATTATTTAAGGGTCATGAGTTCAATCTTCGACGATCATCTATCTAAGATTTAACATATTTTTAGTATTTTTATATTCAAATACTGTAGGATTAGATGAATACGTCATTTCTTAAAATTATTCATCAGTGCACATAACTAATTTAATTTCCACACTCACGAATAAAAAGAAAAGCCTAGCATTCATAAACCATATTAGTTTACTTTAATCATGTTGTTGCATTTCAATAGAGCTAAGCGTCGTTGTAAGAAAACATGCAAACACATAAGTATGTTAATAAACTGGTTGAGTCACGTTTTTCGACTCTACTAGGATGTGGAACATATTTCATGTGCCACGTTGTCCTTAGGATAAAAATAAACCTCTAATTTTTTCAGTAGGAATTGCACTAGAACTAATTGGTATACCAACACTCAATAGATATACTTGTTTGCTTGAAAAACTAAAAGAAAACAGAACTTGCCAAAGTAGGCAGAGAGAGAGAGATGAGAGAGTTTGAAATGTTTGTGGTGTGTCAAATGAGAAGAGAGGTGGGTATATATATTGCAAACCCTAGTTCTTGAACACCCTAAAGTTTTAGGTAATAATCTTTATGAGAGGTTAAGTGTTTGTTGTTCTTTGTTAGGTGGGAAGAAGAAAATAAATTTAGCTAAGTATGGAAGATGTAGTTGATGGCCAAAAAGGAAAGAATAAGGCTTGTTGGTTGAGAATTTAATAAGTCTTGAGAGGTTATGCTCAGGGCTTAGTCATTGTGAGGATGTCCTAGACGAGAGGGTTGGTGCTTGGCGTGGAGATTCTAGGCGTTGGGGCTTAAGACCAGACGAGATAATTCCAAAGAGGTTATCTAGGCGATGGAAACTAGTAAGTGAAAGCTTTGTGTATTATCTTTTGACCGTGAGTGCAAGCTTGGTGAGGAGACTTGGGCTACGTAAGGAAGGGCTTACACGCTAG

mRNA sequence

ATGTTGGGACGACAATTTTGGCCTTACTTTTCAGGCAGTTTTGGCTTTGTTCATTACTCGTCCACTTCATCTCCTCCGCTTTTGACACATCTCTTTGGGGCTGCAGTCTTGATTAGCTTTGCAGTTTCATTTCCTGGAGTTTTCCTCCAAGATGGATTCCCGAGAATCGCACTTCTGTTCGAAAAGATCGGTGCTCTTATTGCTGCAATTGACGAGAGGGTTGGTGCTTGGCGTGGAGATTCTAGGCGTTGGGGCTTAAGACCAGACGAGATAATTCCAAAGAGGTTATCTAGGCGATGGAAACTAGTAAGTGAAAGCTTTGTGTATTATCTTTTGACCGTGAGTGCAAGCTTGGTGAGGAGACTTGGGCTACGTAAGGAAGGGCTTACACGCTAG

Coding sequence (CDS)

ATGTTGGGACGACAATTTTGGCCTTACTTTTCAGGCAGTTTTGGCTTTGTTCATTACTCGTCCACTTCATCTCCTCCGCTTTTGACACATCTCTTTGGGGCTGCAGTCTTGATTAGCTTTGCAGTTTCATTTCCTGGAGTTTTCCTCCAAGATGGATTCCCGAGAATCGCACTTCTGTTCGAAAAGATCGGTGCTCTTATTGCTGCAATTGACGAGAGGGTTGGTGCTTGGCGTGGAGATTCTAGGCGTTGGGGCTTAAGACCAGACGAGATAATTCCAAAGAGGTTATCTAGGCGATGGAAACTAGTAAGTGAAAGCTTTGTGTATTATCTTTTGACCGTGAGTGCAAGCTTGGTGAGGAGACTTGGGCTACGTAAGGAAGGGCTTACACGCTAG

Protein sequence

MLGRQFWPYFSGSFGFVHYSSTSSPPLLTHLFGAAVLISFAVSFPGVFLQDGFPRIALLFEKIGALIAAIDERVGAWRGDSRRWGLRPDEIIPKRLSRRWKLVSESFVYYLLTVSASLVRRLGLRKEGLTR

Homology

[Close]

BLAST of CsGy5G012690 vs. NCBI nr
Match: KGN49804.1 (hypothetical protein Csa_5G136880 [Cucumis sativus])

HSP 1 Score: 127.5 bits (319), Expect = 3.4e-26
Identity = 61/62 (98.39%), Postives = 62/62 (100.00%), Query Frame = 0


Query: 70  IDERVGAWRGDSRRWGLRPDEIIPKRLSRRWKLVSESFVYYLLTVSASLVRRLGLRKEGL 129
           +DERVGAWRGDSRRWGLRPDEIIPKRLSRRWKLVSESFVYYLLTVSASLVRRLGLRKEGL
Sbjct: 23  LDERVGAWRGDSRRWGLRPDEIIPKRLSRRWKLVSESFVYYLLTVSASLVRRLGLRKEGL 82

Query: 130 TR 132
           TR
Sbjct: 83  TR 84

[Close]

BLAST of CsGy5G012690 vs. NCBI nr
Match: KGN49803.1 (hypothetical protein Csa_5G136870 [Cucumis sativus])

HSP 1 Score: 100.1 bits (248), Expect = 5.8e-18
Identity = 51/51 (100.00%), Postives = 51/51 (100.00%), Query Frame = 0


Query: 20  SSTSSPPLLTHLFGAAVLISFAVSFPGVFLQDGFPRIALLFEKIGALIAAI 71
           SSTSSPPLLTHLFGAAVLISFAVSFPGVFLQDGFPRIALLFEKIGALIAAI
Sbjct: 72  SSTSSPPLLTHLFGAAVLISFAVSFPGVFLQDGFPRIALLFEKIGALIAAI 122

[Close]

BLAST of CsGy5G012690 vs. NCBI nr
Match: XP_022146444.1 (uncharacterized protein LOC111015658 [Momordica charantia])

HSP 1 Score: 59.3 bits (142), Expect = 1.1e-05
Identity = 33/44 (75.00%), Postives = 36/44 (81.82%), Query Frame = 0


Query: 20  SSTSSPPLL-THLFGAAVLISFAVSFPGVFLQDGFPRIALLFEK 63
           S  SSPP L T LFGAAVLISFAVSF G+FLQ  +PR+ALLFEK
Sbjct: 81  SLPSSPPQLPTLLFGAAVLISFAVSFAGLFLQTAYPRMALLFEK 124

[Close]

BLAST of CsGy5G012690 vs. TrEMBL
Match: tr|A0A0A0KLQ5|A0A0A0KLQ5_CUCSA (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_5G136880 PE=4 SV=1)

HSP 1 Score: 127.5 bits (319), Expect = 2.2e-26
Identity = 61/62 (98.39%), Postives = 62/62 (100.00%), Query Frame = 0


Query: 70  IDERVGAWRGDSRRWGLRPDEIIPKRLSRRWKLVSESFVYYLLTVSASLVRRLGLRKEGL 129
           +DERVGAWRGDSRRWGLRPDEIIPKRLSRRWKLVSESFVYYLLTVSASLVRRLGLRKEGL
Sbjct: 23  LDERVGAWRGDSRRWGLRPDEIIPKRLSRRWKLVSESFVYYLLTVSASLVRRLGLRKEGL 82

Query: 130 TR 132
           TR
Sbjct: 83  TR 84

[Close]

BLAST of CsGy5G012690 vs. TrEMBL
Match: tr|A0A0A0KJN8|A0A0A0KJN8_CUCSA (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_5G136870 PE=4 SV=1)

HSP 1 Score: 100.1 bits (248), Expect = 3.8e-18
Identity = 51/51 (100.00%), Postives = 51/51 (100.00%), Query Frame = 0


Query: 20  SSTSSPPLLTHLFGAAVLISFAVSFPGVFLQDGFPRIALLFEKIGALIAAI 71
           SSTSSPPLLTHLFGAAVLISFAVSFPGVFLQDGFPRIALLFEKIGALIAAI
Sbjct: 72  SSTSSPPLLTHLFGAAVLISFAVSFPGVFLQDGFPRIALLFEKIGALIAAI 122

The following BLAST results are available for this feature:

BLAST of CsGy5G012690 vs. NCBI nr


Match Name	E-value	Identity	Description
KGN49804.1	3.4e-26	98.39	hypothetical protein Csa_5G136880 [Cucumis sativus]	[more]
KGN49803.1	5.8e-18	100.00	hypothetical protein Csa_5G136870 [Cucumis sativus]	[more]
XP_022146444.1	1.1e-05	75.00	uncharacterized protein LOC111015658 [Momordica charantia]	[more]

BLAST of CsGy5G012690 vs. TAIR10


Match Name	E-value	Identity	Description

BLAST of CsGy5G012690 vs. Swiss-Prot


Match Name	E-value	Identity	Description

BLAST of CsGy5G012690 vs. TrEMBL


Match Name	E-value	Identity	Description
tr\|A0A0A0KLQ5\|A0A0A0KLQ5_CUCSA	2.2e-26	98.39	Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_5G136880 PE=4 SV=1	[more]
tr\|A0A0A0KJN8\|A0A0A0KJN8_CUCSA	3.8e-18	100.00	Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_5G136870 PE=4 SV=1	[more]

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0008150	biological_process
cellular_component	GO:0016021	integral component of membrane
molecular_function	GO:0003674	molecular_function

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
CsGy5G012690.1	CsGy5G012690.1	mRNA

Synteny

The following gene(s) are orthologous to this gene:


Gene	Orthologue	Organism	Block
CsGy5G012690	CmaCh15G008450	Cucurbita maxima (Rimu)	cgybcmaB612
CsGy5G012690	Cla97C01G007740	Watermelon (97103) v2	cgybwmbB320

The following gene(s) are paralogous to this gene:

None

The following block(s) are covering this gene:


Gene	Organism	Block
CsGy5G012690	Cucurbita maxima (Rimu)	cgybcmaB652
CsGy5G012690	Cucurbita moschata (Rifu)	cgybcmoB587
CsGy5G012690	Cucurbita moschata (Rifu)	cgybcmoB629
CsGy5G012690	Cucurbita pepo (Zucchini)	cgybcpeB601
CsGy5G012690	Cucurbita pepo (Zucchini)	cgybcpeB630
CsGy5G012690	Cucumber (Chinese Long) v2	cgybcuB225
CsGy5G012690	Bottle gourd (USVL1VR-Ls)	cgyblsiB295
CsGy5G012690	Melon (DHL92) v3.5.1	cgybmeB302
CsGy5G012690	Melon (DHL92) v3.6.1	cgybmedB302
CsGy5G012690	Watermelon (Charleston Gray)	cgybwcgB333
CsGy5G012690	Watermelon (97103) v1	cgybwmB382
CsGy5G012690	Wild cucumber (PI 183967)	cgybcpiB227
CsGy5G012690	Silver-seed gourd	carcgybB0486
CsGy5G012690	Silver-seed gourd	carcgybB0817
CsGy5G012690	Cucumber (Chinese Long) v3	cgybcucB232
CsGy5G012690	Wax gourd	cgybwgoB415