CsGy5G006170 (gene) Cucumber (Gy14) v2

Overview
NameCsGy5G006170
Typegene
OrganismCucumis sativus (Cucumber (Gy14) v2)
DescriptionPentatricopeptide repeat-containing protein family
LocationChr5 : 4112761 .. 4116153 (-)
Genome Viewer
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: CDSexon
Hold the cursor over a type above to highlight its positions in the sequence below.
ATGGGGTCCAACTTCACCGGCCGCCGCCATATCCCCACCGTCCCTCAAACTGCTGCAATTGCACAATTTCATCGGAATTTTCTTCCCCGGAGAATCGCCTCACCGGAGAGACAGGGATTTGAGGGTGCTGGCCTTTGCAGCTCCTCGCACTTCCACCCATGTCTTTGCATTCGTTTTCGCTTTCTCTCTTGTTGTCGTCACTCTCATCAGCTCTCTCAAAGTCGACTATAACCTTACATGAGGCTTCATTGAGGAGGTATTCCACTTCCACTTTCTATTTTCTTGGGATTTTTCTATGATTGGAAGTAATCGGTGTTTTTGGTTTGAATTCGCTCAGCTGGATTGATTTCGTCATTATTGTTACTGGTCGTATTACTCGTGTTTGAATGCCAGTAATGGAGTAGAACATGTAATTACAATATTGATTGTAGTGAAAGAGTCATATATATTGAATAATAGTTGTTTTATAGGGTGGTTTGGATTGAGCCCTTGAGATTATCACCTGATTGTGTACCATTTCATGTTAGAAATCTGTAGTATATTTAGTGAGTAGGTGAACATCGTCTGATTTGATTTGTGGCTTCTAACACATTTTTATTTGATAATTTGATGCTTTGTCTTGGTGAGTGGGTAATTTTAGGTTTGATACTCTTGATTAAATGTACTCCACCCCTTTTTCTGTAGCTCTTGGATGCTGTTTTTATTACTTTTTTATTTTTTATAATTGGGAGTCAGTGCTATGCTTCACTACATCCGAGGCTTGTGCCCCCACAAGGTATTCAAAGGTTCGAATTTAGGGCCTCTAAGCTGGTATGACCAAGAGACTTCAAGCATTTACCAATGGGGCCAGCCTTTTGGGGCAGTTCTTGGATGTTCATGTTACTGTTAGTACTCTGGGATTATTAATTATTACAACAAAATTTCAAATTTATGATTTTAGTCCCCAATTGCTTTCACTAGAGTTTATAGCTGTTCAAAGTAGAGAGGTAAGCTCGTTTCCTGTTTAATAACCCGTTGAGGCTATCTAATAGGCCTTAAATGGACTTAGTATTCCATGAGGTGATTATACCCAATGCCTTTGAGTTACTTTTTTCTATTAATTTTTGTTTCCTATTGAATACATGTTGTAATTTCTACGCCCCTTTTCTGGCCCAAGAAAACTTTTACTTCCCAACTTACAAGTAACAATAGTGGTGTAACTTGTTTGTGTTAGATATTATATTAAATTTGCTTTCACTCATCAACTTAAGCTTTTGGGTTGAGTTTGTGATTTAAGATGGTATCAAAGCATGCGGTCCAGGAGGTCTTGTGTTCAAGCCCCTACATTATTGTTTCCTTCTCCATTGATTTCCACTTGTTGGTTCTTTCTTTATATTTCCAACCCACAAGTGAGGAGAGTATTAGATATTATATTAAATTTGTCTTTCACCCATCAACTTAAGTTTTTGGGTTGAATTGGTGATTTAAGAGTTTGTATCAGAACTTTTTTTTTGTGTCATCAAGCCTCCAACATCATATGGATAATGACAATGTTCACTTCAACTTCAATTTCCTTCTCACGTCTTCTTTGCACAACTAAGTCGTAATTCATCGTGTAGGAAGCATTTGGATCAAGTATACGTTCAGTTAATTGTGTCTGGACTACATAAGTGCCGTTTCTTGATGATCAAATTTATCAATGCTTGTTTGCATTTTGGAGATGTTAACTACGCACACAAGGCATTTCGCGAAGTCTCAGAACCGGATATTTTGTTGTGGAATGCCATCATAAAGGGTTACACACAGAAGAATATTGTTGATGCCCCTATCAGAATGTATATGGATATGCAAATATCACAGGTGCATCCAAATTGCTTCACATTCTTGTATGTGCTTAAAGCATGTGGTGGAACGTCAGTGGAAGGAATAGGTAAACAGATACATGGTCAGACATTTAAATATGGCTTTGGATCAAATGTTTTTGTGCAGAATAGTCTTGTGTCAATGTATGCTAAATTTGGTCAAATCTCATATGCTAGGATTGTGTTTGATAAGCTGCACGATAGAACTGTTGTTTCATGGACTTCCATTATTTCTGGGTATGTTCAGAACGGTGATCCCATGGAAGCATTGAATGTTTTCAAAGAAATGAGACAATGTAATGTAAAGCCTGATTGGATTGCCCTTGTTAGTGTGATGACCGCATATACAAACGTGGAGGATTTGGGACAAGGAAAGTCCATTCATGGTTTAGTGACTAAATTGGGTTTAGAATTTGAACCTGACATAGTGATATCACTCACTACTATGTATGCAAAACGTGGATTGGTGGAAGTTGCTAGATTTTTCTTTAATCGGATGGAAAAACCGAATTTGATATTGTGGAATGCTATGATTTCTGGCTATGCAAACAATGGATATGGTGAAGAAGCAATCAAGCTATTCCGTGAGATGATTACGAAAAATATCAGGGTTGATTCTATTACTATGAGGTCTGCTGTTCTAGCCAGTGCCCAAGTCGGGTCTCTTGAACTAGCAAGATGGTTGGATGGTTACATCTCTAAGAGTGAATACAGAGATGATACTTTTGTGAACACGGGCCTTATAGATATGTATGCAAAATGCGGAAGCATATATTTGGCTCGTTGCGTATTCGATAGAGTGGCCGATAAAGACGTTGTCTTATGGAGTGTAATGATTATGGGATATGGATTGCATGGTCATGGACAAGAAGCCATCTGCCTTTACAATGAAATGAAGCAAGCTGGAGTTTGTCCAAACGATGGTACTTTTATTGGTCTTCTCACAGCTTGCAAAAACTCAGGTCTTGTAAAAGAGGGATGGGAGCTTTTCCACCTGATGCCAGACCATGGAATTGAACCACATCACCAGCATTACTCTTGTGTGGTCGATCTTCTAGGACGTGCAGGCTATTTGAACCAAGCCTACGATTTCATTATGAGCATGCCAATTAAACCTGGAGTTAGTGTTTGGGGGGCTCTTCTGAGTGCGTGCAAGATCCACCGCAAAGTAAGGTTGGGAGAAATTGCTGCAGAACAACTTTTCATATTAGATCCATATAATACAGGGCATTATGTGCAACTCTCAAACCTCTATGCTTCTGCCCATTTATGGACTCGTGTGGCTAACGTTCGTTTAATGATGACACAAAAAGGACTGAACAAGGACCTTGGACATAGTTCTATCGAGATCAATGGAAATCTCGAAACGTTTCAAGTTGGAGATAGATCACATCCCAAATCAAAGGAAATTTTCGAAGAGCTTGATAGATTAGAGAAAAGATTAAAAGCAGCTGGTTATGTTCCTCATATGGAATCTGTTCTACATGACCTGAACCATGAGGAGATTGAGGAAACTCTTTGTCACCATAGTGAGAGACTAGCAGTTGCTTAT

mRNA sequence

ATGGGGTCCAACTTCACCGGCCGCCGCCATATCCCCACCGTCCCTCAAACTGCTGCAATTGCACAATTTCATCGGAATTTTCTTCCCCGGAGAATCGCCTCACCGGAGAGACAGGGATTTGAGGATGTTAACTACGCACACAAGGCATTTCGCGAAGTCTCAGAACCGGATATTTTGTTGTGGAATGCCATCATAAAGGGTTACACACAGAAGAATATTGTTGATGCCCCTATCAGAATGTATATGGATATGCAAATATCACAGGTGCATCCAAATTGCTTCACATTCTTGTATGTGCTTAAAGCATGTGGTGGAACGATTGTGTTTGATAAGCTGCACGATAGAACTGTTGTTTCATGGACTTCCATTATTTCTGGGTATGTTCAGAACGGTGATCCCATGGAAGCATTGAATGTTTTCAAAGAAATGAGACAATGTAATGTAAAGCCTGATTGGATTGCCCTTGTTACCAGTGCCCAAGTCGGGTCTCTTGAACTAGCAAGATGGTTGGATGGTTACATCTCTAAGAGTGAATACAGAGATGATACTTTTGTGAACACGGGCCTTATAGATATGTATGCAAAATGCGGAAGCATATATTTGGCTCGTTGCGTATTCGATAGAGTGGCCGATAAAGACGTTGTCTTATGGAGTGTAATGATTATGGGATATGGATTGCATGGTCATGGACAAGAAGCCATCTGCCTTTACAATGAAATGAAGCAAGCTGGAGTTTGTCCAAACGATGGTACTTTTATTGGTCTTCTCACAGCTTGCAAAAACTCAGGTCTTGTAAAAGAGGGATGGGAGCTTTTCCACCTGATGCCAGACCATGGAATTGAACCACATCACCAGCATTACTCTTGTGTGGTCGATCTTCTAGGACGTGCAGGCTATTTGAACCAAGCCTACGATTTCATTATGAGCATGCCAATTAAACCTGGAGTTAGTGTTTGGGGGGCTCTTCTGAGTGCGTGCAAGATCCACCGCAAAGTAAGGTTGGGAGAAATTGCTGCAGAACAACTTTTCATATTAGATCCATATAATACAGGGCATTATGTGCAACTCTCAAACCTCTATGCTTCTGCCCATTTATGGACTCGTGTGGCTAACGTTCGTTTAATGATGACACAAAAAGGACTGAACAAGGACCTTGGACATAGTTCTATCGAGATCAATGGAAATCTCGAAACGTTTCAAGTTGGAGATAGATCACATCCCAAATCAAAGGAAATTTTCGAAGAGCTTGATAGATTAGAGAAAAGATTAAAAGCAGCTGGTTATGTTCCTCATATGGAATCTGTTCTACATGACCTGAACCATGAGGAGATTGAGGAAACTCTTTGTCACCATAGTGAGAGACTAGCAGTTGCTTAT

Coding sequence (CDS)

ATGGGGTCCAACTTCACCGGCCGCCGCCATATCCCCACCGTCCCTCAAACTGCTGCAATTGCACAATTTCATCGGAATTTTCTTCCCCGGAGAATCGCCTCACCGGAGAGACAGGGATTTGAGGATGTTAACTACGCACACAAGGCATTTCGCGAAGTCTCAGAACCGGATATTTTGTTGTGGAATGCCATCATAAAGGGTTACACACAGAAGAATATTGTTGATGCCCCTATCAGAATGTATATGGATATGCAAATATCACAGGTGCATCCAAATTGCTTCACATTCTTGTATGTGCTTAAAGCATGTGGTGGAACGATTGTGTTTGATAAGCTGCACGATAGAACTGTTGTTTCATGGACTTCCATTATTTCTGGGTATGTTCAGAACGGTGATCCCATGGAAGCATTGAATGTTTTCAAAGAAATGAGACAATGTAATGTAAAGCCTGATTGGATTGCCCTTGTTACCAGTGCCCAAGTCGGGTCTCTTGAACTAGCAAGATGGTTGGATGGTTACATCTCTAAGAGTGAATACAGAGATGATACTTTTGTGAACACGGGCCTTATAGATATGTATGCAAAATGCGGAAGCATATATTTGGCTCGTTGCGTATTCGATAGAGTGGCCGATAAAGACGTTGTCTTATGGAGTGTAATGATTATGGGATATGGATTGCATGGTCATGGACAAGAAGCCATCTGCCTTTACAATGAAATGAAGCAAGCTGGAGTTTGTCCAAACGATGGTACTTTTATTGGTCTTCTCACAGCTTGCAAAAACTCAGGTCTTGTAAAAGAGGGATGGGAGCTTTTCCACCTGATGCCAGACCATGGAATTGAACCACATCACCAGCATTACTCTTGTGTGGTCGATCTTCTAGGACGTGCAGGCTATTTGAACCAAGCCTACGATTTCATTATGAGCATGCCAATTAAACCTGGAGTTAGTGTTTGGGGGGCTCTTCTGAGTGCGTGCAAGATCCACCGCAAAGTAAGGTTGGGAGAAATTGCTGCAGAACAACTTTTCATATTAGATCCATATAATACAGGGCATTATGTGCAACTCTCAAACCTCTATGCTTCTGCCCATTTATGGACTCGTGTGGCTAACGTTCGTTTAATGATGACACAAAAAGGACTGAACAAGGACCTTGGACATAGTTCTATCGAGATCAATGGAAATCTCGAAACGTTTCAAGTTGGAGATAGATCACATCCCAAATCAAAGGAAATTTTCGAAGAGCTTGATAGATTAGAGAAAAGATTAAAAGCAGCTGGTTATGTTCCTCATATGGAATCTGTTCTACATGACCTGAACCATGAGGAGATTGAGGAAACTCTTTGTCACCATAGTGAGAGACTAGCAGTTGCTTAT

Protein sequence

MGSNFTGRRHIPTVPQTAAIAQFHRNFLPRRIASPERQGFEDVNYAHKAFREVSEPDILLWNAIIKGYTQKNIVDAPIRMYMDMQISQVHPNCFTFLYVLKACGGTIVFDKLHDRTVVSWTSIISGYVQNGDPMEALNVFKEMRQCNVKPDWIALVTSAQVGSLELARWLDGYISKSEYRDDTFVNTGLIDMYAKCGSIYLARCVFDRVADKDVVLWSVMIMGYGLHGHGQEAICLYNEMKQAGVCPNDGTFIGLLTACKNSGLVKEGWELFHLMPDHGIEPHHQHYSCVVDLLGRAGYLNQAYDFIMSMPIKPGVSVWGALLSACKIHRKVRLGEIAAEQLFILDPYNTGHYVQLSNLYASAHLWTRVANVRLMMTQKGLNKDLGHSSIEINGNLETFQVGDRSHPKSKEIFEELDRLEKRLKAAGYVPHMESVLHDLNHEEIEETLCHHSERLAVAY
Homology
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BLAST of CsGy5G006170 vs. NCBI nr
Match: XP_011654911.1 (PREDICTED: pentatricopeptide repeat-containing protein At3g12770 [Cucumis sativus] >KGN50460.1 hypothetical protein Csa_5G175830 [Cucumis sativus])

HSP 1 Score: 812.4 bits (2097), Expect = 8.0e-232
Identity = 418/567 (73.72%), Postives = 419/567 (73.90%), Query Frame = 0 

Query: 40  FEDVNYAHKAFREVSEPDILLWNAIIKGYTQKNIVDAPIRMYMDMQISQVHPNCFTFLYV 99
           F DVNYAHKAFREVSEPDILLWNAIIKGYTQKNIVDAPIRMYMDMQISQVHPNCFTFLYV
Sbjct: 65  FGDVNYAHKAFREVSEPDILLWNAIIKGYTQKNIVDAPIRMYMDMQISQVHPNCFTFLYV 124

Query: 100 LKACGGT------------------------------------------IVFDKLHDRTV 159
           LKACGGT                                          IVFDKLHDRTV
Sbjct: 125 LKACGGTSVEGIGKQIHGQTFKYGFGSNVFVQNSLVSMYAKFGQISYARIVFDKLHDRTV 184

Query: 160 VSWTSIISGYVQNGDPMEALNVFKEMRQCNVKPDWIALVT-------------------- 219
           VSWTSIISGYVQNGDPMEALNVFKEMRQCNVKPDWIALV+                    
Sbjct: 185 VSWTSIISGYVQNGDPMEALNVFKEMRQCNVKPDWIALVSVMTAYTNVEDLGQGKSIHGL 244

Query: 220 ------------------------------------------------------------ 279
                                                                       
Sbjct: 245 VTKLGLEFEPDIVISLTTMYAKRGLVEVARFFFNRMEKPNLILWNAMISGYANNGYGEEA 304

Query: 280 -------------------------SAQVGSLELARWLDGYISKSEYRDDTFVNTGLIDM 339
                                    SAQVGSLELARWLDGYISKSEYRDDTFVNTGLIDM
Sbjct: 305 IKLFREMITKNIRVDSITMRSAVLASAQVGSLELARWLDGYISKSEYRDDTFVNTGLIDM 364

Query: 340 YAKCGSIYLARCVFDRVADKDVVLWSVMIMGYGLHGHGQEAICLYNEMKQAGVCPNDGTF 399
           YAKCGSIYLARCVFDRVADKDVVLWSVMIMGYGLHGHGQEAICLYNEMKQAGVCPNDGTF
Sbjct: 365 YAKCGSIYLARCVFDRVADKDVVLWSVMIMGYGLHGHGQEAICLYNEMKQAGVCPNDGTF 424

Query: 400 IGLLTACKNSGLVKEGWELFHLMPDHGIEPHHQHYSCVVDLLGRAGYLNQAYDFIMSMPI 459
           IGLLTACKNSGLVKEGWELFHLMPDHGIEPHHQHYSCVVDLLGRAGYLNQAYDFIMSMPI
Sbjct: 425 IGLLTACKNSGLVKEGWELFHLMPDHGIEPHHQHYSCVVDLLGRAGYLNQAYDFIMSMPI 484

[Close]
BLAST of CsGy5G006170 vs. NCBI nr
Match: XP_008445864.1 (PREDICTED: pentatricopeptide repeat-containing protein At3g12770 [Cucumis melo] >XP_016900179.1 PREDICTED: pentatricopeptide repeat-containing protein At3g12770 [Cucumis melo] >XP_016900180.1 PREDICTED: pentatricopeptide repeat-containing protein At3g12770 [Cucumis melo])

HSP 1 Score: 761.9 bits (1966), Expect = 1.2e-216
Identity = 393/566 (69.43%), Postives = 404/566 (71.38%), Query Frame = 0 

Query: 40  FEDVNYAHKAFREVSEPDILLWNAIIKGYTQKNIVDAPIRMYMDMQISQVHPNCFTFLYV 99
           F DVNYAHKAF EVSEPDI LWNAIIKGY QKNIV  PIRMYMDMQISQVHPNCFTFLYV
Sbjct: 65  FGDVNYAHKAFCEVSEPDIPLWNAIIKGYAQKNIVGGPIRMYMDMQISQVHPNCFTFLYV 124

Query: 100 LKACGGT-----------------------------------------IVFDKLHDRTVV 159
           LKACGGT                                         IVFDKLHDRTVV
Sbjct: 125 LKACGGTSVELGKQIHGHTFKYGFGSNVFVQNSLVSMYAKFGQTSSARIVFDKLHDRTVV 184

Query: 160 SWTSIISGYVQNGDPMEALNVFKEMRQCNVKPDWIALVT--------------------- 219
           SWTSIISGYVQNGDPMEAL VFKEMRQCNVKPDWIALV+                     
Sbjct: 185 SWTSIISGYVQNGDPMEALKVFKEMRQCNVKPDWIALVSVMTAYTDVEDMGQGKSIHGLV 244

Query: 220 ------------------------------------------------------------ 279
                                                                       
Sbjct: 245 TKLGLEFEPDIVISLTTMYAKRGLVEVARFFFDRMEKPNLILWNAMISGYAKNGYGEEAI 304

Query: 280 ------------------------SAQVGSLELARWLDGYISKSEYRDDTFVNTGLIDMY 339
                                    AQVGSLELA WLDGYISKSEYRDDTFVNT L+DMY
Sbjct: 305 KLFREMISKNIRVDSITMRSAILAGAQVGSLELATWLDGYISKSEYRDDTFVNTALVDMY 364

Query: 340 AKCGSIYLARCVFDRVADKDVVLWSVMIMGYGLHGHGQEAICLYNEMKQAGVCPNDGTFI 399
           AKCGSIYLARCVFDRVA+KDVVLWS MIMGYGLHGHGQEAI LYNEMKQAGV PNDGTFI
Sbjct: 365 AKCGSIYLARCVFDRVANKDVVLWSAMIMGYGLHGHGQEAIRLYNEMKQAGVSPNDGTFI 424

Query: 400 GLLTACKNSGLVKEGWELFHLMPDHGIEPHHQHYSCVVDLLGRAGYLNQAYDFIMSMPIK 459
           GLLTACKNSGLVKEGWELFH MP+HGIEPHHQHYSC+VDLLGRAGYLNQAYDFIMSMPIK
Sbjct: 425 GLLTACKNSGLVKEGWELFHQMPNHGIEPHHQHYSCIVDLLGRAGYLNQAYDFIMSMPIK 484

[Close]
BLAST of CsGy5G006170 vs. NCBI nr
Match: XP_022139117.1 (pentatricopeptide repeat-containing protein At3g12770 [Momordica charantia] >XP_022139118.1 pentatricopeptide repeat-containing protein At3g12770 [Momordica charantia] >XP_022139119.1 pentatricopeptide repeat-containing protein At3g12770 [Momordica charantia])

HSP 1 Score: 701.4 bits (1809), Expect = 2.0e-198
Identity = 368/601 (61.23%), Postives = 400/601 (66.56%), Query Frame = 0 

Query: 7   GRRHIPTVPQTAAIAQFHR-NFLPRRIASPERQGFEDVNYAHKAFREVSEPDILLWNAII 66
           GR+H+  +     ++  H+  FL  +  +       DV YAHKAFREV EPDILLWNA+I
Sbjct: 32  GRKHLDQLYVQLIVSGLHKCRFLVIKFVNACLH-LGDVYYAHKAFREVLEPDILLWNAVI 91

Query: 67  KGYTQKNIVDAPIRMYMDMQISQVHPNCFTFLYVLKACGG-------------------- 126
           KGYTQ NI    +++Y +MQ+S VHP+CFTFLYVLKACGG                    
Sbjct: 92  KGYTQNNIFVGAVKLYTEMQVSGVHPDCFTFLYVLKACGGMSIEEIGKQMHGQTFKYGFG 151

Query: 127 ----------------------TIVFDKLHDRTVVSWTSIISGYVQNGDPMEALNVFKEM 186
                                  +VFDKL DRTVVSWTSIISGYVQNGDP EAL+VFK+M
Sbjct: 152 SNVFVQNSLVSMYAKFGQTSPARVVFDKLQDRTVVSWTSIISGYVQNGDPAEALSVFKKM 211

Query: 187 RQCNVKPDWIALVT---------------------------------------------- 246
           RQ NVK DWIALV+                                              
Sbjct: 212 RQSNVKLDWIALVSVMTAYTDMEDLGQGKSIHGLVTKLGLEFEPDIVVSLTTMYAKRGQV 271

Query: 247 -----------------------------------------------------------S 306
                                                                       
Sbjct: 272 EVARFFFNQMEKPNLVLWNAMISGYAKNGYGEEAIKLFREMISKNIRVDSVTVRSAILAG 331

Query: 307 AQVGSLELARWLDGYISKSEYRDDTFVNTGLIDMYAKCGSIYLARCVFDRVADKDVVLWS 366
           AQVGSL+LARWLDGYISKSEYRDDTFVNT LIDMYAKCGSIY A  VFDR+ DKDVVLWS
Sbjct: 332 AQVGSLDLARWLDGYISKSEYRDDTFVNTALIDMYAKCGSIYFASLVFDRMVDKDVVLWS 391

Query: 367 VMIMGYGLHGHGQEAICLYNEMKQAGVCPNDGTFIGLLTACKNSGLVKEGWELFHLMPDH 426
            MIMGYGLHGHG+EAI LYN MKQ GV PND TF+GLLTACKNSGLVKEGW+LFH + DH
Sbjct: 392 AMIMGYGLHGHGKEAINLYNAMKQVGVRPNDVTFVGLLTACKNSGLVKEGWDLFHEIRDH 451

Query: 427 GIEPHHQHYSCVVDLLGRAGYLNQAYDFIMSMPIKPGVSVWGALLSACKIHRKVRLGEIA 460
           GIEPHHQHYSCVVDLLGRAGYLNQAYDFIM+MPIKPGVSVWGALLSACKIHR+V+LGEIA
Sbjct: 452 GIEPHHQHYSCVVDLLGRAGYLNQAYDFIMNMPIKPGVSVWGALLSACKIHRQVKLGEIA 511

[Close]
BLAST of CsGy5G006170 vs. NCBI nr
Match: XP_022988437.1 (pentatricopeptide repeat-containing protein At3g12770 isoform X1 [Cucurbita maxima] >XP_022988445.1 pentatricopeptide repeat-containing protein At3g12770 isoform X1 [Cucurbita maxima])

HSP 1 Score: 697.6 bits (1799), Expect = 2.9e-197
Identity = 362/565 (64.07%), Postives = 383/565 (67.79%), Query Frame = 0 

Query: 42  DVNYAHKAFREVSEPDILLWNAIIKGYTQKNIVDAPIRMYMDMQISQVHPNCFTFLYVLK 101
           DVNYAHK FREV EPDILLWN IIKGYTQ NI    IRMY DMQ+S V+P+CFTFLYVLK
Sbjct: 73  DVNYAHKVFREVLEPDILLWNGIIKGYTQNNIFAGAIRMYKDMQVSGVNPDCFTFLYVLK 132

Query: 102 ACGG------------------------------------------TIVFDKLHDRTVVS 161
           ACGG                                           +VFDKLH+RTVVS
Sbjct: 133 ACGGMSVEGIGKQMHSQTFKYGFGSNVFVQNSLVSMYARYGQTSSARLVFDKLHNRTVVS 192

Query: 162 WTSIISGYVQNGDPMEALNVFKEMRQCNVKPDWIALVT---------------------- 221
           WTSIISGYVQNGDPM+AL VFK+MRQ  VK DWI LV+                      
Sbjct: 193 WTSIISGYVQNGDPMDALRVFKDMRQSTVKLDWIVLVSVMTAYTDMEDLGQGKAIHSLVT 252

Query: 222 ------------------------------------------------------------ 281
                                                                       
Sbjct: 253 KLGLEFEPDIVVSLTNMYAKLGRVEIARFFFNQMEKPNLLLWNAMISGYAKNGYGEEAIE 312

Query: 282 -----------------------SAQVGSLELARWLDGYISKSEYRDDTFVNTGLIDMYA 341
                                   AQVGSLELARWLDGYISKSEYRDD FVNT LIDM+A
Sbjct: 313 LFRKMISKNIGVDSVTVRSAILAVAQVGSLELARWLDGYISKSEYRDDVFVNTALIDMHA 372

Query: 342 KCGSIYLARCVFDRVADKDVVLWSVMIMGYGLHGHGQEAICLYNEMKQAGVCPNDGTFIG 401
           KCGSI  AR VFDR+ DKD+V WS MIMGYGLHGHGQEAI LYN MKQ+G+ PND TF+G
Sbjct: 373 KCGSICFARSVFDRMVDKDIVSWSAMIMGYGLHGHGQEAIDLYNRMKQSGIRPNDVTFVG 432

Query: 402 LLTACKNSGLVKEGWELFHLMPDHGIEPHHQHYSCVVDLLGRAGYLNQAYDFIMSMPIKP 460
           LLTACKNSGLVKEGWELFH M DHGIEPHHQHYSCVVDLLGRAGYLN+AYDFIMSMPIKP
Sbjct: 433 LLTACKNSGLVKEGWELFHQMQDHGIEPHHQHYSCVVDLLGRAGYLNRAYDFIMSMPIKP 492

[Close]
BLAST of CsGy5G006170 vs. NCBI nr
Match: XP_022988451.1 (pentatricopeptide repeat-containing protein At3g12770 isoform X2 [Cucurbita maxima])

HSP 1 Score: 697.6 bits (1799), Expect = 2.9e-197
Identity = 362/565 (64.07%), Postives = 383/565 (67.79%), Query Frame = 0 

Query: 42  DVNYAHKAFREVSEPDILLWNAIIKGYTQKNIVDAPIRMYMDMQISQVHPNCFTFLYVLK 101
           DVNYAHK FREV EPDILLWN IIKGYTQ NI    IRMY DMQ+S V+P+CFTFLYVLK
Sbjct: 67  DVNYAHKVFREVLEPDILLWNGIIKGYTQNNIFAGAIRMYKDMQVSGVNPDCFTFLYVLK 126

Query: 102 ACGG------------------------------------------TIVFDKLHDRTVVS 161
           ACGG                                           +VFDKLH+RTVVS
Sbjct: 127 ACGGMSVEGIGKQMHSQTFKYGFGSNVFVQNSLVSMYARYGQTSSARLVFDKLHNRTVVS 186

Query: 162 WTSIISGYVQNGDPMEALNVFKEMRQCNVKPDWIALVT---------------------- 221
           WTSIISGYVQNGDPM+AL VFK+MRQ  VK DWI LV+                      
Sbjct: 187 WTSIISGYVQNGDPMDALRVFKDMRQSTVKLDWIVLVSVMTAYTDMEDLGQGKAIHSLVT 246

Query: 222 ------------------------------------------------------------ 281
                                                                       
Sbjct: 247 KLGLEFEPDIVVSLTNMYAKLGRVEIARFFFNQMEKPNLLLWNAMISGYAKNGYGEEAIE 306

Query: 282 -----------------------SAQVGSLELARWLDGYISKSEYRDDTFVNTGLIDMYA 341
                                   AQVGSLELARWLDGYISKSEYRDD FVNT LIDM+A
Sbjct: 307 LFRKMISKNIGVDSVTVRSAILAVAQVGSLELARWLDGYISKSEYRDDVFVNTALIDMHA 366

Query: 342 KCGSIYLARCVFDRVADKDVVLWSVMIMGYGLHGHGQEAICLYNEMKQAGVCPNDGTFIG 401
           KCGSI  AR VFDR+ DKD+V WS MIMGYGLHGHGQEAI LYN MKQ+G+ PND TF+G
Sbjct: 367 KCGSICFARSVFDRMVDKDIVSWSAMIMGYGLHGHGQEAIDLYNRMKQSGIRPNDVTFVG 426

Query: 402 LLTACKNSGLVKEGWELFHLMPDHGIEPHHQHYSCVVDLLGRAGYLNQAYDFIMSMPIKP 460
           LLTACKNSGLVKEGWELFH M DHGIEPHHQHYSCVVDLLGRAGYLN+AYDFIMSMPIKP
Sbjct: 427 LLTACKNSGLVKEGWELFHQMQDHGIEPHHQHYSCVVDLLGRAGYLNRAYDFIMSMPIKP 486

[Close]
BLAST of CsGy5G006170 vs. TAIR10
Match: AT3G12770.1 (mitochondrial editing factor 22)

HSP 1 Score: 427.9 bits (1099), Expect = 7.7e-120
Identity = 230/569 (40.42%), Postives = 308/569 (54.13%), Query Frame = 0 

Query: 40  FEDVNYAHKAFREVSEPDILLWNAIIKGYTQKNIVDAPIRMYMDMQISQVHPNCFTFLYV 99
           F D+ +A + F ++  P I  WNAII+GY++ N     + MY +MQ+++V P+ FTF ++
Sbjct: 66  FGDITFARQVFDDLPRPQIFPWNAIIRGYSRNNHFQDALLMYSNMQLARVSPDSFTFPHL 125

Query: 100 LKACGG------------------------------------------TIVFD--KLHDR 159
           LKAC G                                            VF+   L +R
Sbjct: 126 LKACSGLSHLQMGRFVHAQVFRLGFDADVFVQNGLIALYAKCRRLGSARTVFEGLPLPER 185

Query: 160 TVVSWTSIISGYVQNGDPMEALNVFKEMRQCNVKPDWIALVTSAQ----VGSLELARWLD 219
           T+VSWT+I+S Y QNG+PMEAL +F +MR+ +VKPDW+ALV+       +  L+  R + 
Sbjct: 186 TIVSWTAIVSAYAQNGEPMEALEIFSQMRKMDVKPDWVALVSVLNAFTCLQDLKQGRSIH 245

Query: 220 GYISKSEYRDDTFVNTGLIDMYAKCGSIYLARCVFD------------------------ 279
             + K     +  +   L  MYAKCG +  A+ +FD                        
Sbjct: 246 ASVVKMGLEIEPDLLISLNTMYAKCGQVATAKILFDKMKSPNLILWNAMISGYAKNGYAR 305

Query: 280 ------------------------------------------------------------ 339
                                                                       
Sbjct: 306 EAIDMFHEMINXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX 365

Query: 340 -----------------RVADKDVVLWSVMIMGYGLHGHGQEAICLYNEMKQAGVCPNDG 399
                            R  D+DVV+WS MI+GYGLHG  +EAI LY  M++ GV PND 
Sbjct: 366 XXXXXXXXXXXXXXXXXRTLDRDVVVWSAMIVGYGLHGRAREAISLYRAMERGGVHPNDV 425

Query: 400 TFIGLLTACKNSGLVKEGWELFHLMPDHGIEPHHQHYSCVVDLLGRAGYLNQAYDFIMSM 459
           TF+GLL AC +SG+V+EGW  F+ M DH I P  QHY+CV+DLLGRAG+L+QAY+ I  M
Sbjct: 426 TFLGLLMACNHSGMVREGWWFFNRMADHKINPQQQHYACVIDLLGRAGHLDQAYEVIKCM 485

[Close]
BLAST of CsGy5G006170 vs. TAIR10
Match: AT3G49142.1 (Tetratricopeptide repeat (TPR)-like superfamily protein)

HSP 1 Score: 335.1 bits (858), Expect = 6.8e-92
Identity = 164/422 (38.86%), Postives = 254/422 (60.19%), Query Frame = 0 

Query: 52  EVSEPDILLWNAIIKGYTQKNIVDAPIRMYMDMQISQVHPNCFTFLYVLKACGGTI---- 111
           E+S  D++ WN+++ GY Q    D  + +  +M+  ++  +  T   +L A   T     
Sbjct: 200 EMSRRDVVSWNSLVVGYAQNQRFDDALEVCREMESVKISHDAGTMASLLPAVSNTTTENV 259

Query: 112 -----VFDKLHDRTVVSWTSIISGYVQNGDPMEALNVFKEMRQCNVKPDWIALVT----S 171
                +F K+  +++VSW  +I  Y++N  P+EA+ ++  M     +PD +++ +     
Sbjct: 260 MYVKDMFFKMGKKSLVSWNVMIGVYMKNAMPVEAVELYSRMEADGFEPDAVSITSVLPAC 319

Query: 172 AQVGSLELARWLDGYISKSEYRDDTFVNTGLIDMYAKCGSIYLARCVFDRVADKDVVLWS 231
               +L L + + GYI + +   +  +   LIDMYAKCG +  AR VF+ +  +DVV W+
Sbjct: 320 GDTSALSLGKKIHGYIERKKLIPNLLLENALIDMYAKCGCLEKARDVFENMKSRDVVSWT 379

Query: 232 VMIMGYGLHGHGQEAICLYNEMKQAGVCPNDGTFIGLLTACKNSGLVKEGWELFHLMPDH 291
            MI  YG  G G +A+ L+++++ +G+ P+   F+  L AC ++GL++EG   F LM DH
Sbjct: 380 AMISAYGFSGRGCDAVALFSKLQDSGLVPDSIAFVTTLAACSHAGLLEEGRSCFKLMTDH 439

Query: 292 -GIEPHHQHYSCVVDLLGRAGYLNQAYDFIMSMPIKPGVSVWGALLSACKIHRKVRLGEI 351
             I P  +H +C+VDLLGRAG + +AY FI  M ++P   VWGALL AC++H    +G +
Sbjct: 440 YKITPRLEHLACMVDLLGRAGKVKEAYRFIQDMSMEPNERVWGALLGACRVHSDTDIGLL 499

Query: 352 AAEQLFILDPYNTGHYVQLSNLYASAHLWTRVANVRLMMTQKGLNKDLGHSSIEINGNLE 411
           AA++LF L P  +G+YV LSN+YA A  W  V N+R +M  KGL K+ G S++E+N  + 
Sbjct: 500 AADKLFQLAPEQSGYYVLLSNIYAKAGRWEEVTNIRNIMKSKGLKKNPGASNVEVNRIIH 559

Query: 412 TFQVGDRSHPKSKEIFEELDRLEKRLKAAGYVPHMESVLHDLNHEEIEETLCHHSERLAV 460
           TF VGDRSHP+S EI+ ELD L K++K  GYVP  ES LHD+  E+ E  L  HSE+LA+
Sbjct: 560 TFLVGDRSHPQSDEIYRELDVLVKKMKELGYVPDSESALHDVEEEDKETHLAVHSEKLAI 619

[Close]
BLAST of CsGy5G006170 vs. TAIR10
Match: AT4G30700.1 (Pentatricopeptide repeat (PPR) superfamily protein)

HSP 1 Score: 330.9 bits (847), Expect = 1.3e-90
Identity = 171/454 (37.67%), Postives = 267/454 (58.81%), Query Frame = 0 

Query: 50  FREVSEPDILLWNAIIKGYTQKNIVDAPIRMYMDMQIS---------------------- 109
           FRE  +PDI+ +NA+I GYT     +  + ++ ++ +S                      
Sbjct: 279 FREFRKPDIVAYNAMIHGYTSNGETELSLSLFKELMLSGARLRSSTLVSLVPVSGHLMLI 338

Query: 110 -QVHPNCFTFLYVLKACGGTI----------------VFDKLHDRTVVSWTSIISGYVQN 169
             +H  C    ++  A   T                 +FD+  ++++ SW ++ISGY QN
Sbjct: 339 YAIHGYCLKSNFLSHASVSTALTTVYSKLNEIESARKLFDESPEKSLPSWNAMISGYTQN 398

Query: 170 GDPMEALNVFKEMRQCNVKPDWIA----LVTSAQVGSLELARWLDGYISKSEYRDDTFVN 229
           G   +A+++F+EM++    P+ +     L   AQ+G+L L +W+   +  +++    +V+
Sbjct: 399 GLTEDAISLFREMQKSEFSPNPVTITCILSACAQLGALSLGKWVHDLVRSTDFESSIYVS 458

Query: 230 TGLIDMYAKCGSIYLARCVFDRVADKDVVLWSVMIMGYGLHGHGQEAICLYNEMKQAGVC 289
           T LI MYAKCGSI  AR +FD +  K+ V W+ MI GYGLHG GQEA+ ++ EM  +G+ 
Sbjct: 459 TALIGMYAKCGSIAEARRLFDLMTKKNEVTWNTMISGYGLHGQGQEALNIFYEMLNSGIT 518

Query: 290 PNDGTFIGLLTACKNSGLVKEGWELFH-LMPDHGIEPHHQHYSCVVDLLGRAGYLNQAYD 349
           P   TF+ +L AC ++GLVKEG E+F+ ++  +G EP  +HY+C+VD+LGRAG+L +A  
Sbjct: 519 PTPVTFLCVLYACSHAGLVKEGDEIFNSMIHRYGFEPSVKHYACMVDILGRAGHLQRALQ 578

Query: 350 FIMSMPIKPGVSVWGALLSACKIHRKVRLGEIAAEQLFILDPYNTGHYVQLSNLYASAHL 409
           FI +M I+PG SVW  LL AC+IH+   L    +E+LF LDP N G++V LSN++++   
Sbjct: 579 FIEAMSIEPGSSVWETLLGACRIHKDTNLARTVSEKLFELDPDNVGYHVLLSNIHSADRN 638

Query: 410 WTRVANVRLMMTQKGLNKDLGHSSIEINGNLETFQVGDRSHPKSKEIFEELDRLEKRLKA 460
           + + A VR    ++ L K  G++ IEI      F  GD+SHP+ KEI+E+L++LE +++ 
Sbjct: 639 YPQAATVRQTAKKRKLAKAPGYTLIEIGETPHVFTSGDQSHPQVKEIYEKLEKLEGKMRE 698

[Close]
BLAST of CsGy5G006170 vs. TAIR10
Match: AT1G11290.1 (Pentatricopeptide repeat (PPR) superfamily protein)

HSP 1 Score: 326.6 bits (836), Expect = 2.4e-89
Identity = 170/461 (36.88%), Postives = 268/461 (58.13%), Query Frame = 0 

Query: 46  AHKAFREVSEPDILLWNAIIKGYTQKNIVDAPIRMYMDMQISQVHPNCFTFLYVLKACG- 105
           A + F  + E +++ WN++I  Y Q       + ++  M    V P   + +  L AC  
Sbjct: 290 ARQLFDGMLERNVVSWNSMIDAYVQNENPKEAMLIFQKMLDEGVKPTDVSVMGALHACAD 349

Query: 106 -----------------------------------------GTIVFDKLHDRTVVSWTSI 165
                                                       +F KL  RT+VSW ++
Sbjct: 350 LGDLERGRFIHKLSVELGLDRNVSVVNSLISMYCKCKEVDTAASMFGKLQSRTLVSWNAM 409

Query: 166 ISGYVQNGDPMEALNVFKEMRQCNVKPD---WIALVTS-AQVGSLELARWLDGYISKSEY 225
           I G+ QNG P++ALN F +MR   VKPD   +++++T+ A++     A+W+ G + +S  
Sbjct: 410 ILGFAQNGRPIDALNYFSQMRSRTVKPDTFTYVSVITAIAELSITHHAKWIHGVVMRSCL 469

Query: 226 RDDTFVNTGLIDMYAKCGSIYLARCVFDRVADKDVVLWSVMIMGYGLHGHGQEAICLYNE 285
             + FV T L+DMYAKCG+I +AR +FD ++++ V  W+ MI GYG HG G+ A+ L+ E
Sbjct: 470 DKNVFVTTALVDMYAKCGAIMIARLIFDMMSERHVTTWNAMIDGYGTHGFGKAALELFEE 529

Query: 286 MKQAGVCPNDGTFIGLLTACKNSGLVKEGWELFHLMPD-HGIEPHHQHYSCVVDLLGRAG 345
           M++  + PN  TF+ +++AC +SGLV+ G + F++M + + IE    HY  +VDLLGRAG
Sbjct: 530 MQKGTIKPNGVTFLSVISACSHSGLVEAGLKCFYMMKENYSIELSMDHYGAMVDLLGRAG 589

Query: 346 YLNQAYDFIMSMPIKPGVSVWGALLSACKIHRKVRLGEIAAEQLFILDPYNTGHYVQLSN 405
            LN+A+DFIM MP+KP V+V+GA+L AC+IH+ V   E AAE+LF L+P + G++V L+N
Sbjct: 590 RLNEAWDFIMQMPVKPAVNVYGAMLGACQIHKNVNFAEKAAERLFELNPDDGGYHVLLAN 649

Query: 406 LYASAHLWTRVANVRLMMTQKGLNKDLGHSSIEINGNLETFQVGDRSHPKSKEIFEELDR 460
           +Y +A +W +V  VR+ M ++GL K  G S +EI   + +F  G  +HP SK+I+  L++
Sbjct: 650 IYRAASMWEKVGQVRVSMLRQGLRKTPGCSMVEIKNEVHSFFSGSTAHPDSKKIYAFLEK 709

[Close]
BLAST of CsGy5G006170 vs. TAIR10
Match: AT3G23330.1 (Tetratricopeptide repeat (TPR)-like superfamily protein)

HSP 1 Score: 322.8 bits (826), Expect = 3.5e-88
Identity = 173/464 (37.28%), Postives = 253/464 (54.53%), Query Frame = 0 

Query: 43  VNYAHKAFREVSEPDILLWNAIIKGYTQKNIVDAPIRMYMDMQISQVHPNCFTFLYVL-- 102
           ++   + F  +   D++ +N II GY Q  + +  +RM  +M  + + P+ FT   VL  
Sbjct: 192 IDSVRRVFEVMPRKDVVSYNTIIAGYAQSGMYEDALRMVREMGTTDLKPDSFTLSSVLPI 251

Query: 103 ----------KACGGTI------------------------------VFDKLHDRTVVSW 162
                     K   G +                              VF +L+ R  +SW
Sbjct: 252 FSEYVDVIKGKEIHGYVIRKGIDSDVYIGSSLVDMYAKSARIEDSERVFSRLYCRDGISW 311

Query: 163 TSIISGYVQNGDPMEALNVFKEMRQCNVKPDWIA----LVTSAQVGSLELARWLDGYISK 222
            S+++GYVQNG   EAL +F++M    VKP  +A    +   A + +L L + L GY+ +
Sbjct: 312 NSLVAGYVQNGRYNEALRLFRQMVTAKVKPGAVAFSSVIPACAHLATLHLGKQLHGYVLR 371

Query: 223 SEYRDDTFVNTGLIDMYAKCGSIYLARCVFDRVADKDVVLWSVMIMGYGLHGHGQEAICL 282
             +  + F+ + L+DMY+KCG+I  AR +FDR+   D V W+ +IMG+ LHGHG EA+ L
Sbjct: 372 GGFGSNIFIASALVDMYSKCGNIKAARKIFDRMNVLDEVSWTAIIMGHALHGHGHEAVSL 431

Query: 283 YNEMKQAGVCPNDGTFIGLLTACKNSGLVKEGWELFHLMPD-HGIEPHHQHYSCVVDLLG 342
           + EMK+ GV PN   F+ +LTAC + GLV E W  F+ M   +G+    +HY+ V DLLG
Sbjct: 432 FEEMKRQGVKPNQVAFVAVLTACSHVGLVDEAWGYFNSMTKVYGLNQELEHYAAVADLLG 491

Query: 343 RAGYLNQAYDFIMSMPIKPGVSVWGALLSACKIHRKVRLGEIAAEQLFILDPYNTGHYVQ 402
           RAG L +AY+FI  M ++P  SVW  LLS+C +H+ + L E  AE++F +D  N G YV 
Sbjct: 492 RAGKLEEAYNFISKMCVEPTGSVWSTLLSSCSVHKNLELAEKVAEKIFTVDSENMGAYVL 551

Query: 403 LSNLYASAHLWTRVANVRLMMTQKGLNKDLGHSSIEINGNLETFQVGDRSHPKSKEIFEE 460
           + N+YAS   W  +A +RL M +KGL K    S IE+      F  GDRSHP   +I E 
Sbjct: 552 MCNMYASNGRWKEMAKLRLRMRKKGLRKKPACSWIEMKNKTHGFVSGDRSHPSMDKINEF 611

[Close]
BLAST of CsGy5G006170 vs. Swiss-Prot
Match: sp|Q9LTV8|PP224_ARATH (Pentatricopeptide repeat-containing protein At3g12770 OS=Arabidopsis thaliana OX=3702 GN=PCMP-H43 PE=2 SV=1)

HSP 1 Score: 427.9 bits (1099), Expect = 1.4e-118
Identity = 230/569 (40.42%), Postives = 308/569 (54.13%), Query Frame = 0 

Query: 40  FEDVNYAHKAFREVSEPDILLWNAIIKGYTQKNIVDAPIRMYMDMQISQVHPNCFTFLYV 99
           F D+ +A + F ++  P I  WNAII+GY++ N     + MY +MQ+++V P+ FTF ++
Sbjct: 66  FGDITFARQVFDDLPRPQIFPWNAIIRGYSRNNHFQDALLMYSNMQLARVSPDSFTFPHL 125

Query: 100 LKACGG------------------------------------------TIVFD--KLHDR 159
           LKAC G                                            VF+   L +R
Sbjct: 126 LKACSGLSHLQMGRFVHAQVFRLGFDADVFVQNGLIALYAKCRRLGSARTVFEGLPLPER 185

Query: 160 TVVSWTSIISGYVQNGDPMEALNVFKEMRQCNVKPDWIALVTSAQ----VGSLELARWLD 219
           T+VSWT+I+S Y QNG+PMEAL +F +MR+ +VKPDW+ALV+       +  L+  R + 
Sbjct: 186 TIVSWTAIVSAYAQNGEPMEALEIFSQMRKMDVKPDWVALVSVLNAFTCLQDLKQGRSIH 245

Query: 220 GYISKSEYRDDTFVNTGLIDMYAKCGSIYLARCVFD------------------------ 279
             + K     +  +   L  MYAKCG +  A+ +FD                        
Sbjct: 246 ASVVKMGLEIEPDLLISLNTMYAKCGQVATAKILFDKMKSPNLILWNAMISGYAKNGYAR 305

Query: 280 ------------------------------------------------------------ 339
                                                                       
Sbjct: 306 EAIDMFHEMINXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX 365

Query: 340 -----------------RVADKDVVLWSVMIMGYGLHGHGQEAICLYNEMKQAGVCPNDG 399
                            R  D+DVV+WS MI+GYGLHG  +EAI LY  M++ GV PND 
Sbjct: 366 XXXXXXXXXXXXXXXXXRTLDRDVVVWSAMIVGYGLHGRAREAISLYRAMERGGVHPNDV 425

Query: 400 TFIGLLTACKNSGLVKEGWELFHLMPDHGIEPHHQHYSCVVDLLGRAGYLNQAYDFIMSM 459
           TF+GLL AC +SG+V+EGW  F+ M DH I P  QHY+CV+DLLGRAG+L+QAY+ I  M
Sbjct: 426 TFLGLLMACNHSGMVREGWWFFNRMADHKINPQQQHYACVIDLLGRAGHLDQAYEVIKCM 485

[Close]
BLAST of CsGy5G006170 vs. Swiss-Prot
Match: sp|P0C899|PP271_ARATH (Putative pentatricopeptide repeat-containing protein At3g49142 OS=Arabidopsis thaliana OX=3702 GN=PCMP-H77 PE=3 SV=1)

HSP 1 Score: 335.1 bits (858), Expect = 1.2e-90
Identity = 164/422 (38.86%), Postives = 254/422 (60.19%), Query Frame = 0 

Query: 52  EVSEPDILLWNAIIKGYTQKNIVDAPIRMYMDMQISQVHPNCFTFLYVLKACGGTI---- 111
           E+S  D++ WN+++ GY Q    D  + +  +M+  ++  +  T   +L A   T     
Sbjct: 200 EMSRRDVVSWNSLVVGYAQNQRFDDALEVCREMESVKISHDAGTMASLLPAVSNTTTENV 259

Query: 112 -----VFDKLHDRTVVSWTSIISGYVQNGDPMEALNVFKEMRQCNVKPDWIALVT----S 171
                +F K+  +++VSW  +I  Y++N  P+EA+ ++  M     +PD +++ +     
Sbjct: 260 MYVKDMFFKMGKKSLVSWNVMIGVYMKNAMPVEAVELYSRMEADGFEPDAVSITSVLPAC 319

Query: 172 AQVGSLELARWLDGYISKSEYRDDTFVNTGLIDMYAKCGSIYLARCVFDRVADKDVVLWS 231
               +L L + + GYI + +   +  +   LIDMYAKCG +  AR VF+ +  +DVV W+
Sbjct: 320 GDTSALSLGKKIHGYIERKKLIPNLLLENALIDMYAKCGCLEKARDVFENMKSRDVVSWT 379

Query: 232 VMIMGYGLHGHGQEAICLYNEMKQAGVCPNDGTFIGLLTACKNSGLVKEGWELFHLMPDH 291
            MI  YG  G G +A+ L+++++ +G+ P+   F+  L AC ++GL++EG   F LM DH
Sbjct: 380 AMISAYGFSGRGCDAVALFSKLQDSGLVPDSIAFVTTLAACSHAGLLEEGRSCFKLMTDH 439

Query: 292 -GIEPHHQHYSCVVDLLGRAGYLNQAYDFIMSMPIKPGVSVWGALLSACKIHRKVRLGEI 351
             I P  +H +C+VDLLGRAG + +AY FI  M ++P   VWGALL AC++H    +G +
Sbjct: 440 YKITPRLEHLACMVDLLGRAGKVKEAYRFIQDMSMEPNERVWGALLGACRVHSDTDIGLL 499

Query: 352 AAEQLFILDPYNTGHYVQLSNLYASAHLWTRVANVRLMMTQKGLNKDLGHSSIEINGNLE 411
           AA++LF L P  +G+YV LSN+YA A  W  V N+R +M  KGL K+ G S++E+N  + 
Sbjct: 500 AADKLFQLAPEQSGYYVLLSNIYAKAGRWEEVTNIRNIMKSKGLKKNPGASNVEVNRIIH 559

Query: 412 TFQVGDRSHPKSKEIFEELDRLEKRLKAAGYVPHMESVLHDLNHEEIEETLCHHSERLAV 460
           TF VGDRSHP+S EI+ ELD L K++K  GYVP  ES LHD+  E+ E  L  HSE+LA+
Sbjct: 560 TFLVGDRSHPQSDEIYRELDVLVKKMKELGYVPDSESALHDVEEEDKETHLAVHSEKLAI 619

[Close]
BLAST of CsGy5G006170 vs. Swiss-Prot
Match: sp|Q9SUH6|PP341_ARATH (Pentatricopeptide repeat-containing protein At4g30700 OS=Arabidopsis thaliana OX=3702 GN=DYW9 PE=2 SV=1)

HSP 1 Score: 330.9 bits (847), Expect = 2.3e-89
Identity = 171/454 (37.67%), Postives = 267/454 (58.81%), Query Frame = 0 

Query: 50  FREVSEPDILLWNAIIKGYTQKNIVDAPIRMYMDMQIS---------------------- 109
           FRE  +PDI+ +NA+I GYT     +  + ++ ++ +S                      
Sbjct: 279 FREFRKPDIVAYNAMIHGYTSNGETELSLSLFKELMLSGARLRSSTLVSLVPVSGHLMLI 338

Query: 110 -QVHPNCFTFLYVLKACGGTI----------------VFDKLHDRTVVSWTSIISGYVQN 169
             +H  C    ++  A   T                 +FD+  ++++ SW ++ISGY QN
Sbjct: 339 YAIHGYCLKSNFLSHASVSTALTTVYSKLNEIESARKLFDESPEKSLPSWNAMISGYTQN 398

Query: 170 GDPMEALNVFKEMRQCNVKPDWIA----LVTSAQVGSLELARWLDGYISKSEYRDDTFVN 229
           G   +A+++F+EM++    P+ +     L   AQ+G+L L +W+   +  +++    +V+
Sbjct: 399 GLTEDAISLFREMQKSEFSPNPVTITCILSACAQLGALSLGKWVHDLVRSTDFESSIYVS 458

Query: 230 TGLIDMYAKCGSIYLARCVFDRVADKDVVLWSVMIMGYGLHGHGQEAICLYNEMKQAGVC 289
           T LI MYAKCGSI  AR +FD +  K+ V W+ MI GYGLHG GQEA+ ++ EM  +G+ 
Sbjct: 459 TALIGMYAKCGSIAEARRLFDLMTKKNEVTWNTMISGYGLHGQGQEALNIFYEMLNSGIT 518

Query: 290 PNDGTFIGLLTACKNSGLVKEGWELFH-LMPDHGIEPHHQHYSCVVDLLGRAGYLNQAYD 349
           P   TF+ +L AC ++GLVKEG E+F+ ++  +G EP  +HY+C+VD+LGRAG+L +A  
Sbjct: 519 PTPVTFLCVLYACSHAGLVKEGDEIFNSMIHRYGFEPSVKHYACMVDILGRAGHLQRALQ 578

Query: 350 FIMSMPIKPGVSVWGALLSACKIHRKVRLGEIAAEQLFILDPYNTGHYVQLSNLYASAHL 409
           FI +M I+PG SVW  LL AC+IH+   L    +E+LF LDP N G++V LSN++++   
Sbjct: 579 FIEAMSIEPGSSVWETLLGACRIHKDTNLARTVSEKLFELDPDNVGYHVLLSNIHSADRN 638

Query: 410 WTRVANVRLMMTQKGLNKDLGHSSIEINGNLETFQVGDRSHPKSKEIFEELDRLEKRLKA 460
           + + A VR    ++ L K  G++ IEI      F  GD+SHP+ KEI+E+L++LE +++ 
Sbjct: 639 YPQAATVRQTAKKRKLAKAPGYTLIEIGETPHVFTSGDQSHPQVKEIYEKLEKLEGKMRE 698

[Close]
BLAST of CsGy5G006170 vs. Swiss-Prot
Match: sp|Q3E6Q1|PPR32_ARATH (Pentatricopeptide repeat-containing protein At1g11290, chloroplastic OS=Arabidopsis thaliana OX=3702 GN=PCMP-H40 PE=2 SV=1)

HSP 1 Score: 326.6 bits (836), Expect = 4.3e-88
Identity = 170/461 (36.88%), Postives = 268/461 (58.13%), Query Frame = 0 

Query: 46  AHKAFREVSEPDILLWNAIIKGYTQKNIVDAPIRMYMDMQISQVHPNCFTFLYVLKACG- 105
           A + F  + E +++ WN++I  Y Q       + ++  M    V P   + +  L AC  
Sbjct: 290 ARQLFDGMLERNVVSWNSMIDAYVQNENPKEAMLIFQKMLDEGVKPTDVSVMGALHACAD 349

Query: 106 -----------------------------------------GTIVFDKLHDRTVVSWTSI 165
                                                       +F KL  RT+VSW ++
Sbjct: 350 LGDLERGRFIHKLSVELGLDRNVSVVNSLISMYCKCKEVDTAASMFGKLQSRTLVSWNAM 409

Query: 166 ISGYVQNGDPMEALNVFKEMRQCNVKPD---WIALVTS-AQVGSLELARWLDGYISKSEY 225
           I G+ QNG P++ALN F +MR   VKPD   +++++T+ A++     A+W+ G + +S  
Sbjct: 410 ILGFAQNGRPIDALNYFSQMRSRTVKPDTFTYVSVITAIAELSITHHAKWIHGVVMRSCL 469

Query: 226 RDDTFVNTGLIDMYAKCGSIYLARCVFDRVADKDVVLWSVMIMGYGLHGHGQEAICLYNE 285
             + FV T L+DMYAKCG+I +AR +FD ++++ V  W+ MI GYG HG G+ A+ L+ E
Sbjct: 470 DKNVFVTTALVDMYAKCGAIMIARLIFDMMSERHVTTWNAMIDGYGTHGFGKAALELFEE 529

Query: 286 MKQAGVCPNDGTFIGLLTACKNSGLVKEGWELFHLMPD-HGIEPHHQHYSCVVDLLGRAG 345
           M++  + PN  TF+ +++AC +SGLV+ G + F++M + + IE    HY  +VDLLGRAG
Sbjct: 530 MQKGTIKPNGVTFLSVISACSHSGLVEAGLKCFYMMKENYSIELSMDHYGAMVDLLGRAG 589

Query: 346 YLNQAYDFIMSMPIKPGVSVWGALLSACKIHRKVRLGEIAAEQLFILDPYNTGHYVQLSN 405
            LN+A+DFIM MP+KP V+V+GA+L AC+IH+ V   E AAE+LF L+P + G++V L+N
Sbjct: 590 RLNEAWDFIMQMPVKPAVNVYGAMLGACQIHKNVNFAEKAAERLFELNPDDGGYHVLLAN 649

Query: 406 LYASAHLWTRVANVRLMMTQKGLNKDLGHSSIEINGNLETFQVGDRSHPKSKEIFEELDR 460
           +Y +A +W +V  VR+ M ++GL K  G S +EI   + +F  G  +HP SK+I+  L++
Sbjct: 650 IYRAASMWEKVGQVRVSMLRQGLRKTPGCSMVEIKNEVHSFFSGSTAHPDSKKIYAFLEK 709

[Close]
BLAST of CsGy5G006170 vs. Swiss-Prot
Match: sp|Q9LW63|PP251_ARATH (Putative pentatricopeptide repeat-containing protein At3g23330 OS=Arabidopsis thaliana OX=3702 GN=PCMP-H32 PE=3 SV=1)

HSP 1 Score: 322.8 bits (826), Expect = 6.3e-87
Identity = 173/464 (37.28%), Postives = 253/464 (54.53%), Query Frame = 0 

Query: 43  VNYAHKAFREVSEPDILLWNAIIKGYTQKNIVDAPIRMYMDMQISQVHPNCFTFLYVL-- 102
           ++   + F  +   D++ +N II GY Q  + +  +RM  +M  + + P+ FT   VL  
Sbjct: 192 IDSVRRVFEVMPRKDVVSYNTIIAGYAQSGMYEDALRMVREMGTTDLKPDSFTLSSVLPI 251

Query: 103 ----------KACGGTI------------------------------VFDKLHDRTVVSW 162
                     K   G +                              VF +L+ R  +SW
Sbjct: 252 FSEYVDVIKGKEIHGYVIRKGIDSDVYIGSSLVDMYAKSARIEDSERVFSRLYCRDGISW 311

Query: 163 TSIISGYVQNGDPMEALNVFKEMRQCNVKPDWIA----LVTSAQVGSLELARWLDGYISK 222
            S+++GYVQNG   EAL +F++M    VKP  +A    +   A + +L L + L GY+ +
Sbjct: 312 NSLVAGYVQNGRYNEALRLFRQMVTAKVKPGAVAFSSVIPACAHLATLHLGKQLHGYVLR 371

Query: 223 SEYRDDTFVNTGLIDMYAKCGSIYLARCVFDRVADKDVVLWSVMIMGYGLHGHGQEAICL 282
             +  + F+ + L+DMY+KCG+I  AR +FDR+   D V W+ +IMG+ LHGHG EA+ L
Sbjct: 372 GGFGSNIFIASALVDMYSKCGNIKAARKIFDRMNVLDEVSWTAIIMGHALHGHGHEAVSL 431

Query: 283 YNEMKQAGVCPNDGTFIGLLTACKNSGLVKEGWELFHLMPD-HGIEPHHQHYSCVVDLLG 342
           + EMK+ GV PN   F+ +LTAC + GLV E W  F+ M   +G+    +HY+ V DLLG
Sbjct: 432 FEEMKRQGVKPNQVAFVAVLTACSHVGLVDEAWGYFNSMTKVYGLNQELEHYAAVADLLG 491

Query: 343 RAGYLNQAYDFIMSMPIKPGVSVWGALLSACKIHRKVRLGEIAAEQLFILDPYNTGHYVQ 402
           RAG L +AY+FI  M ++P  SVW  LLS+C +H+ + L E  AE++F +D  N G YV 
Sbjct: 492 RAGKLEEAYNFISKMCVEPTGSVWSTLLSSCSVHKNLELAEKVAEKIFTVDSENMGAYVL 551

Query: 403 LSNLYASAHLWTRVANVRLMMTQKGLNKDLGHSSIEINGNLETFQVGDRSHPKSKEIFEE 460
           + N+YAS   W  +A +RL M +KGL K    S IE+      F  GDRSHP   +I E 
Sbjct: 552 MCNMYASNGRWKEMAKLRLRMRKKGLRKKPACSWIEMKNKTHGFVSGDRSHPSMDKINEF 611

[Close]
BLAST of CsGy5G006170 vs. TrEMBL
Match: tr|A0A0A0KLB9|A0A0A0KLB9_CUCSA (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_5G175830 PE=4 SV=1)

HSP 1 Score: 812.4 bits (2097), Expect = 5.3e-232
Identity = 418/567 (73.72%), Postives = 419/567 (73.90%), Query Frame = 0 

Query: 40  FEDVNYAHKAFREVSEPDILLWNAIIKGYTQKNIVDAPIRMYMDMQISQVHPNCFTFLYV 99
           F DVNYAHKAFREVSEPDILLWNAIIKGYTQKNIVDAPIRMYMDMQISQVHPNCFTFLYV
Sbjct: 65  FGDVNYAHKAFREVSEPDILLWNAIIKGYTQKNIVDAPIRMYMDMQISQVHPNCFTFLYV 124

Query: 100 LKACGGT------------------------------------------IVFDKLHDRTV 159
           LKACGGT                                          IVFDKLHDRTV
Sbjct: 125 LKACGGTSVEGIGKQIHGQTFKYGFGSNVFVQNSLVSMYAKFGQISYARIVFDKLHDRTV 184

Query: 160 VSWTSIISGYVQNGDPMEALNVFKEMRQCNVKPDWIALVT-------------------- 219
           VSWTSIISGYVQNGDPMEALNVFKEMRQCNVKPDWIALV+                    
Sbjct: 185 VSWTSIISGYVQNGDPMEALNVFKEMRQCNVKPDWIALVSVMTAYTNVEDLGQGKSIHGL 244

Query: 220 ------------------------------------------------------------ 279
                                                                       
Sbjct: 245 VTKLGLEFEPDIVISLTTMYAKRGLVEVARFFFNRMEKPNLILWNAMISGYANNGYGEEA 304

Query: 280 -------------------------SAQVGSLELARWLDGYISKSEYRDDTFVNTGLIDM 339
                                    SAQVGSLELARWLDGYISKSEYRDDTFVNTGLIDM
Sbjct: 305 IKLFREMITKNIRVDSITMRSAVLASAQVGSLELARWLDGYISKSEYRDDTFVNTGLIDM 364

Query: 340 YAKCGSIYLARCVFDRVADKDVVLWSVMIMGYGLHGHGQEAICLYNEMKQAGVCPNDGTF 399
           YAKCGSIYLARCVFDRVADKDVVLWSVMIMGYGLHGHGQEAICLYNEMKQAGVCPNDGTF
Sbjct: 365 YAKCGSIYLARCVFDRVADKDVVLWSVMIMGYGLHGHGQEAICLYNEMKQAGVCPNDGTF 424

Query: 400 IGLLTACKNSGLVKEGWELFHLMPDHGIEPHHQHYSCVVDLLGRAGYLNQAYDFIMSMPI 459
           IGLLTACKNSGLVKEGWELFHLMPDHGIEPHHQHYSCVVDLLGRAGYLNQAYDFIMSMPI
Sbjct: 425 IGLLTACKNSGLVKEGWELFHLMPDHGIEPHHQHYSCVVDLLGRAGYLNQAYDFIMSMPI 484

[Close]
BLAST of CsGy5G006170 vs. TrEMBL
Match: tr|A0A1S3BEJ1|A0A1S3BEJ1_CUCME (pentatricopeptide repeat-containing protein At3g12770 OS=Cucumis melo OX=3656 GN=LOC103488755 PE=4 SV=1)

HSP 1 Score: 761.9 bits (1966), Expect = 8.2e-217
Identity = 393/566 (69.43%), Postives = 404/566 (71.38%), Query Frame = 0 

Query: 40  FEDVNYAHKAFREVSEPDILLWNAIIKGYTQKNIVDAPIRMYMDMQISQVHPNCFTFLYV 99
           F DVNYAHKAF EVSEPDI LWNAIIKGY QKNIV  PIRMYMDMQISQVHPNCFTFLYV
Sbjct: 65  FGDVNYAHKAFCEVSEPDIPLWNAIIKGYAQKNIVGGPIRMYMDMQISQVHPNCFTFLYV 124

Query: 100 LKACGGT-----------------------------------------IVFDKLHDRTVV 159
           LKACGGT                                         IVFDKLHDRTVV
Sbjct: 125 LKACGGTSVELGKQIHGHTFKYGFGSNVFVQNSLVSMYAKFGQTSSARIVFDKLHDRTVV 184

Query: 160 SWTSIISGYVQNGDPMEALNVFKEMRQCNVKPDWIALVT--------------------- 219
           SWTSIISGYVQNGDPMEAL VFKEMRQCNVKPDWIALV+                     
Sbjct: 185 SWTSIISGYVQNGDPMEALKVFKEMRQCNVKPDWIALVSVMTAYTDVEDMGQGKSIHGLV 244

Query: 220 ------------------------------------------------------------ 279
                                                                       
Sbjct: 245 TKLGLEFEPDIVISLTTMYAKRGLVEVARFFFDRMEKPNLILWNAMISGYAKNGYGEEAI 304

Query: 280 ------------------------SAQVGSLELARWLDGYISKSEYRDDTFVNTGLIDMY 339
                                    AQVGSLELA WLDGYISKSEYRDDTFVNT L+DMY
Sbjct: 305 KLFREMISKNIRVDSITMRSAILAGAQVGSLELATWLDGYISKSEYRDDTFVNTALVDMY 364

Query: 340 AKCGSIYLARCVFDRVADKDVVLWSVMIMGYGLHGHGQEAICLYNEMKQAGVCPNDGTFI 399
           AKCGSIYLARCVFDRVA+KDVVLWS MIMGYGLHGHGQEAI LYNEMKQAGV PNDGTFI
Sbjct: 365 AKCGSIYLARCVFDRVANKDVVLWSAMIMGYGLHGHGQEAIRLYNEMKQAGVSPNDGTFI 424

Query: 400 GLLTACKNSGLVKEGWELFHLMPDHGIEPHHQHYSCVVDLLGRAGYLNQAYDFIMSMPIK 459
           GLLTACKNSGLVKEGWELFH MP+HGIEPHHQHYSC+VDLLGRAGYLNQAYDFIMSMPIK
Sbjct: 425 GLLTACKNSGLVKEGWELFHQMPNHGIEPHHQHYSCIVDLLGRAGYLNQAYDFIMSMPIK 484

[Close]
BLAST of CsGy5G006170 vs. TrEMBL
Match: tr|A0A2N9IUM6|A0A2N9IUM6_FAGSY (Uncharacterized protein OS=Fagus sylvatica OX=28930 GN=FSB_LOCUS56998 PE=4 SV=1)

HSP 1 Score: 580.5 bits (1495), Expect = 3.4e-162
Identity = 301/571 (52.71%), Postives = 353/571 (61.82%), Query Frame = 0 

Query: 36  ERQGFEDVNYAHKAFREVSEPDILLWNAIIKGYTQKNIVDAPIRMYMDMQISQVHPNCFT 95
           E   F ++ YA   F E  +PD+ LWNAII+GY++ N+    I MY+ M+++ V P+CFT
Sbjct: 7   ESSNFGEICYARNVFDEFRDPDVFLWNAIIRGYSRHNMFGDAIEMYLRMEMAGVSPDCFT 66

Query: 96  FLYVLKACGG------------------------------------------TIVFDKLH 155
           F YVLK CGG                                            VFD L+
Sbjct: 67  FPYVLKVCGGLRALEMGRLVHGQIFRHGFESDVFVQNSLVAMYVKCSQPRRARTVFDGLY 126

Query: 156 DRTVVSWTSIISGYVQNGDPMEALNVFKEMRQCNVKPDWIALVT---------------- 215
           DRT+V+WTSIISGY QNG+PMEAL +F +MRQ NV PDWIALV+                
Sbjct: 127 DRTIVTWTSIISGYAQNGEPMEALRIFSQMRQSNVNPDWIALVSVLRAYTDVEDLEQGKS 186

Query: 216 ------------------------------------------------------------ 275
                                                                       
Sbjct: 187 VHGCVIKMGLEYEPDLLISLTSMYAKCGQVTVARSFFNQMEIPNLILWNAMISGYAKNGY 246

Query: 276 -----------------------------SAQVGSLELARWLDGYISKSEYRDDTFVNTG 335
                                         AQVGSLELARW+D YI KSEYR+D FVNT 
Sbjct: 247 AEEAVRLFREMICKNIRVDSITVRSAILACAQVGSLELARWMDDYIMKSEYRNDVFVNTA 306

Query: 336 LIDMYAKCGSIYLARCVFDRVADKDVVLWSVMIMGYGLHGHGQEAICLYNEMKQAGVCPN 395
           LIDMYAKCGS+ LAR VFDR  DKDVV+WS MI+GYGLHG G+EAI LY+ MKQAGVCPN
Sbjct: 307 LIDMYAKCGSVDLARIVFDRTLDKDVVVWSAMIVGYGLHGRGREAIDLYHAMKQAGVCPN 366

Query: 396 DGTFIGLLTACKNSGLVKEGWELFHLMPDHGIEPHHQHYSCVVDLLGRAGYLNQAYDFIM 455
           D TF+GLLTAC +SGLVKEGWELFH M D+GIEP  QHY+CVVDLLGRAG+L QAYDFI 
Sbjct: 367 DVTFVGLLTACNHSGLVKEGWELFHRMRDYGIEPRLQHYACVVDLLGRAGHLGQAYDFIT 426

Query: 456 SMPIKPGVSVWGALLSACKIHRKVRLGEIAAEQLFILDPYNTGHYVQLSNLYASAHLWTR 460
           +MPI+PGVSVWGALLSACKI+R V LGE AAEQLF +DP+NTGHYVQLSNLYAS  LW R
Sbjct: 427 NMPIEPGVSVWGALLSACKIYRNVTLGEYAAEQLFSIDPFNTGHYVQLSNLYASVRLWGR 486

[Close]
BLAST of CsGy5G006170 vs. TrEMBL
Match: tr|A0A1Q3BT98|A0A1Q3BT98_CEPFO (PPR domain-containing protein/PPR_2 domain-containing protein/PPR_3 domain-containing protein/DYW_deaminase domain-containing protein OS=Cephalotus follicularis OX=3775 GN=CFOL_v3_14661 PE=4 SV=1)

HSP 1 Score: 568.5 bits (1464), Expect = 1.3e-158
Identity = 298/565 (52.74%), Postives = 350/565 (61.95%), Query Frame = 0 

Query: 42  DVNYAHKAFREVSEPDILLWNAIIKGYTQKNIVDAPIRMYMDMQISQVHPNCFTFLYVLK 101
           ++ +A KAF E  +PD+ LWNAII+ Y++ N+ D  I MY  MQ++ V P+CFT    LK
Sbjct: 107 EILHARKAFDEFPDPDVFLWNAIIRCYSRHNLFDLAIEMYSRMQLAWVSPDCFTLPQALK 166

Query: 102 ACGG------------------------------------------TIVFDKLHDRTVVS 161
           AC G                                           IVFD L+DRTVVS
Sbjct: 167 ACSGLPALETGRSVHGQIFRHGFESDVFVQNGLVAFYAKCGQIEHARIVFDLLYDRTVVS 226

Query: 162 WTSIISGYVQNGDPMEALNVFKEMRQCNVKPDWIALVT---------------------- 221
           WTSIISGY QNG PMEAL++F +MR+ NV PDWI+LV+                      
Sbjct: 227 WTSIISGYAQNGQPMEALSIFSQMRKMNVTPDWISLVSVIRAYSDIEDLEQGKYVHGCVI 286

Query: 222 ------------------------------------------------------------ 281
                                                                       
Sbjct: 287 KMGGELESDLIVSLTAMYAKCGQVMVARSLFDQMKIPNVMLWNAMISGYAKYGYADEAVE 346

Query: 282 -----------------------SAQVGSLELARWLDGYISKSEYRDDTFVNTGLIDMYA 341
                                   AQVGSL+LARW+D +ISKS Y +D FVNT LIDMYA
Sbjct: 347 LFREMISRNIRTDSITVRSTILACAQVGSLKLARWMDEHISKSNYNNDVFVNTALIDMYA 406

Query: 342 KCGSIYLARCVFDRVADKDVVLWSVMIMGYGLHGHGQEAICLYNEMKQAGVCPNDGTFIG 401
           KCGS+ LAR VFDR  DKDVV+WS MI+GYGLHG GQEAI +Y  MKQ  V PND TF+G
Sbjct: 407 KCGSVDLARKVFDRTPDKDVVVWSAMIVGYGLHGLGQEAIDIYQAMKQTRVRPNDVTFVG 466

Query: 402 LLTACKNSGLVKEGWELFHLMPDHGIEPHHQHYSCVVDLLGRAGYLNQAYDFIMSMPIKP 460
           LLTACK+SGLVKEGW+LFH M D+ IEP HQHY+CVVDLLGRAGYLN+AYDFI+SMPI+P
Sbjct: 467 LLTACKHSGLVKEGWQLFHCMRDYAIEPRHQHYACVVDLLGRAGYLNEAYDFIVSMPIEP 526

[Close]
BLAST of CsGy5G006170 vs. TrEMBL
Match: tr|A0A1U7YZL0|A0A1U7YZL0_NELNU (pentatricopeptide repeat-containing protein At3g12770 OS=Nelumbo nucifera OX=4432 GN=LOC104589458 PE=4 SV=1)

HSP 1 Score: 560.1 bits (1442), Expect = 4.7e-156
Identity = 290/605 (47.93%), Postives = 365/605 (60.33%), Query Frame = 0 

Query: 4   NFTGRRHIPTVPQTAAIAQF-HRNFLPRRIASPERQGFEDVNYAHKAFREVSEPDILLWN 63
           N T ++H+  +     +A F + N+L  +         E ++YA   F E+ EP++ LWN
Sbjct: 75  NLTHKKHLVQIHAQLIVAGFQNSNYLATKFVHASSNAGE-IHYARSLFEEIPEPNVFLWN 134

Query: 64  AIIKGYTQKNIVDAPIRMYMDMQISQVHPNCFTFLYVLKACG------------------ 123
           AI++GY+Q N+    + MY  MQ+ +++P+ FTF YVLKAC                   
Sbjct: 135 AIVRGYSQNNLFSDALEMYSRMQVERMNPDRFTFPYVLKACSSLSDLRMGFRIHAQIFRH 194

Query: 124 ------------------------GTIVFDKLHDRTVVSWTSIISGYVQNGDPMEALNVF 183
                                      VFD+L DRT+VSWTSIISGY QN  P+EAL +F
Sbjct: 195 GFESDVFVQNGLVALYAKCGEISRARAVFDRLSDRTIVSWTSIISGYAQNSQPLEALRIF 254

Query: 184 KEMRQCNVKPDWIALVT------------------------------------------- 243
           +EMRQ NV PDWIALV+                                           
Sbjct: 255 REMRQLNVVPDWIALVSVLKAYTDVEDLKQGKSVHGFVIKMGLELEADLLIAFTAMYAKC 314

Query: 244 ------------------------------------------------------------ 303
                                                                       
Sbjct: 315 GEVMTAKALFDQMEMPNTILWNAMISGFAKNGYAEEAVELLRGMLSKNIRSDSITIRSAI 374

Query: 304 --SAQVGSLELARWLDGYISKSEYRDDTFVNTGLIDMYAKCGSIYLARCVFDRVADKDVV 363
              AQVGS+ELARW+D Y+ ++EYR D FVNT LIDMYAKCGSI  AR VFDR  DKDVV
Sbjct: 375 LACAQVGSMELARWMDDYVEQTEYRTDVFVNTALIDMYAKCGSIDFARRVFDRTVDKDVV 434

Query: 364 LWSVMIMGYGLHGHGQEAICLYNEMKQAGVCPNDGTFIGLLTACKNSGLVKEGWELFHLM 423
           +WS MI+GYGLHG G++AI L++EMK AG+ PND TFIGLL+AC +SGLV+EGWELFH M
Sbjct: 435 VWSAMIVGYGLHGRGRDAIQLFHEMKHAGIEPNDVTFIGLLSACNHSGLVQEGWELFHCM 494

Query: 424 P-DHGIEPHHQHYSCVVDLLGRAGYLNQAYDFIMSMPIKPGVSVWGALLSACKIHRKVRL 460
             DH IEP HQHY+CVVDLLGRAGYL++AYDFIM+MPI+PG++VWGALLSACK+HR V L
Sbjct: 495 KRDHKIEPRHQHYACVVDLLGRAGYLDEAYDFIMNMPIEPGITVWGALLSACKVHRHVPL 554

The following BLAST results are available for this feature:
BLAST of CsGy5G006170 vs. NCBI nr
Match NameE-valueIdentityDescription
XP_011654911.18.0e-23273.72PREDICTED: pentatricopeptide repeat-containing protein At3g12770 [Cucumis sativu... [more]
XP_008445864.11.2e-21669.43PREDICTED: pentatricopeptide repeat-containing protein At3g12770 [Cucumis melo] ... [more]
XP_022139117.12.0e-19861.23pentatricopeptide repeat-containing protein At3g12770 [Momordica charantia] >XP_... [more]
XP_022988437.12.9e-19764.07pentatricopeptide repeat-containing protein At3g12770 isoform X1 [Cucurbita maxi... [more]
XP_022988451.12.9e-19764.07pentatricopeptide repeat-containing protein At3g12770 isoform X2 [Cucurbita maxi... [more]
BLAST of CsGy5G006170 vs. TAIR10
Match NameE-valueIdentityDescription
AT3G12770.17.7e-12040.42mitochondrial editing factor 22[more]
AT3G49142.16.8e-9238.86Tetratricopeptide repeat (TPR)-like superfamily protein[more]
AT4G30700.11.3e-9037.67Pentatricopeptide repeat (PPR) superfamily protein[more]
AT1G11290.12.4e-8936.88Pentatricopeptide repeat (PPR) superfamily protein[more]
AT3G23330.13.5e-8837.28Tetratricopeptide repeat (TPR)-like superfamily protein[more]
BLAST of CsGy5G006170 vs. Swiss-Prot
Match NameE-valueIdentityDescription
sp|Q9LTV8|PP224_ARATH1.4e-11840.42Pentatricopeptide repeat-containing protein At3g12770 OS=Arabidopsis thaliana OX... [more]
sp|P0C899|PP271_ARATH1.2e-9038.86Putative pentatricopeptide repeat-containing protein At3g49142 OS=Arabidopsis th... [more]
sp|Q9SUH6|PP341_ARATH2.3e-8937.67Pentatricopeptide repeat-containing protein At4g30700 OS=Arabidopsis thaliana OX... [more]
sp|Q3E6Q1|PPR32_ARATH4.3e-8836.88Pentatricopeptide repeat-containing protein At1g11290, chloroplastic OS=Arabidop... [more]
sp|Q9LW63|PP251_ARATH6.3e-8737.28Putative pentatricopeptide repeat-containing protein At3g23330 OS=Arabidopsis th... [more]
BLAST of CsGy5G006170 vs. TrEMBL
Match NameE-valueIdentityDescription
tr|A0A0A0KLB9|A0A0A0KLB9_CUCSA5.3e-23273.72Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_5G175830 PE=4 SV=1[more]
tr|A0A1S3BEJ1|A0A1S3BEJ1_CUCME8.2e-21769.43pentatricopeptide repeat-containing protein At3g12770 OS=Cucumis melo OX=3656 GN... [more]
tr|A0A2N9IUM6|A0A2N9IUM6_FAGSY3.4e-16252.71Uncharacterized protein OS=Fagus sylvatica OX=28930 GN=FSB_LOCUS56998 PE=4 SV=1[more]
tr|A0A1Q3BT98|A0A1Q3BT98_CEPFO1.3e-15852.74PPR domain-containing protein/PPR_2 domain-containing protein/PPR_3 domain-conta... [more]
tr|A0A1U7YZL0|A0A1U7YZL0_NELNU4.7e-15647.93pentatricopeptide repeat-containing protein At3g12770 OS=Nelumbo nucifera OX=443... [more]
Annotated Terms
The following terms have been associated with this gene:
Vocabulary: Molecular Function
TermDefinition
GO:0008270zinc ion binding
GO:0005515protein binding
Vocabulary: INTERPRO
TermDefinition
IPR002885Pentatricopeptide_repeat
IPR032867DYW_dom
IPR011990TPR-like_helical_dom_sf
GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
Category Term Accession Term Name
biological_process GO:0008150 biological_process
cellular_component GO:0005575 cellular_component
molecular_function GO:0008270 zinc ion binding
molecular_function GO:0005515 protein binding
Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
CsGy5G006170.1CsGy5G006170.1mRNA


InterPro
Analysis Name: InterPro Annotations of cucumber Gy14 genome (v2)
Date Performed: 2018-09-25
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR011990Tetratricopeptide-like helical domain superfamilyGENE3DG3DSA:1.25.40.10coord: 260..454
e-value: 2.4E-14
score: 55.6
IPR011990Tetratricopeptide-like helical domain superfamilyGENE3DG3DSA:1.25.40.10coord: 36..105
e-value: 1.1E-6
score: 30.0
coord: 106..157
e-value: 2.5E-9
score: 38.7
coord: 158..259
e-value: 2.1E-17
score: 65.0
IPR032867DYW domainPFAMPF14432DYW_deaminasecoord: 386..459
e-value: 7.2E-16
score: 58.1
IPR002885Pentatricopeptide repeatPFAMPF13041PPR_2coord: 212..259
e-value: 3.4E-10
score: 39.9
coord: 56..103
e-value: 8.9E-9
score: 35.3
IPR002885Pentatricopeptide repeatTIGRFAMTIGR00756TIGR00756coord: 215..248
e-value: 9.3E-7
score: 26.6
coord: 252..282
e-value: 0.0019
score: 16.3
coord: 118..152
e-value: 1.1E-9
score: 35.9
IPR002885Pentatricopeptide repeatPFAMPF01535PPRcoord: 118..148
e-value: 1.5E-9
score: 37.4
IPR002885Pentatricopeptide repeatPROSITEPS51375PPRcoord: 395..430
score: 5.064
IPR002885Pentatricopeptide repeatPROSITEPS51375PPRcoord: 182..212
score: 6.248
IPR002885Pentatricopeptide repeatPROSITEPS51375PPRcoord: 213..247
score: 11.126
IPR002885Pentatricopeptide repeatPROSITEPS51375PPRcoord: 116..150
score: 12.617
IPR002885Pentatricopeptide repeatPROSITEPS51375PPRcoord: 57..91
score: 8.791
IPR002885Pentatricopeptide repeatPROSITEPS51375PPRcoord: 349..383
score: 5.174
IPR002885Pentatricopeptide repeatPROSITEPS51375PPRcoord: 248..282
score: 9.865
IPR002885Pentatricopeptide repeatPROSITEPS51375PPRcoord: 283..313
score: 5.514
NoneNo IPR availablePANTHERPTHR24015:SF477SUBFAMILY NOT NAMEDcoord: 107..421
coord: 40..105
NoneNo IPR availablePANTHERPTHR24015FAMILY NOT NAMEDcoord: 107..421
coord: 40..105