CmaCh04G002740 (gene) Cucurbita maxima (Rimu)

Overview
NameCmaCh04G002740
Typegene
OrganismCucurbita maxima (Cucurbita maxima (Rimu))
DescriptionPentatricopeptide repeat-containing protein
LocationCma_Chr04 : 1345180 .. 1350387 (+)
Genome Viewer
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonCDSthree_prime_UTR
Hold the cursor over a type above to highlight its positions in the sequence below.
ATGGGGTCCATCCTCGCCGGCCGCCGCCATATCACCTCAGTCTCTCAAGCTGCTGCAATCGTACAGCTTCGTCGGTACTTGCTTCTCCGAAGAACTTCATCAGCGGGAAGACAGGGATTTGACGGAGCTGGCCTCTGCAGTTCCTCGGACTTCCAGCCATGTCTTTGCATTCATTTTCGCTCTCTCTCTCCTTGACGTCGCTATCTACAGCTCTCTCAAAGGCGGCGGCAACCTCGCAAGAGGCTTTATTGAGGAGGTATTTCACTTTCAGTTTCTACTTTCAAGGCCCTTTTCTGTGATTGGAAGTATCAATGTTTGTGGTTTGAATGCGCTCGCCTAGCTGTGGCTCGTGTTTAGGTTATAGAGAAAGGATATTATATATTGAATATTAGTTATCTTATTAGCTTGGTTGGATTGAGATTTTTAGCTAACTTTATACCATTTGAGGTTAGAAATCAGCTGTATATTTAGTATTTCTAGTAGATGACCAACTTGTGATTTCATATGTGACTTCAAAACACTGTTTTGGTGAGATTCCATGGGGAGGAGAACGAAACATTTCTTTTATAAGGACGTGGAAACCTCTCCATGCGTTTTAAAAACTTTGAGGGTAAGCCCAAAGAGGACAATATCTACTAGCGGCAAGTTTGAGCCATTACAAATTGTATCAGAGCCAAATACCGGACGATGTGCCAGCAAGAAGGCTGAACCTCGAAGGGGGTGGGCACGAGGCAGTGTGTCAGCAAGGACGTTGGGTCTCACATCGATTAGAGAAGGGAACGAGTGCCAGCGATGACGCTGGGCCCTGAAGAGGGGTGGATTGTGAGATCCCACATCGATTGGAGAGGAAAACGAAACATTCTTTATAAGGGTGTTGAAACCTCTCTCTAGCAGGCGTGTTTTAAAAACCTTGAGGGAAAGTCATAGAGCTATTGCCTTATAGTCTATCTATAGCGGTTGAAAATGGGGAGGCAAGCTTATTTGGACCTAACATTTCATTGAGATGATTATGAAATGCCTTGGAGTTACTTTTTCTTTCAATGTTTATTTCTTAATGAATGTTTGTCCTACTTTCTATGTCATTTTCCTCCATTTTCTCTGTATTTCCCGAGAAAGTTTGAACTTTCTAAGTTGTAACTCATCCTGTAGGAAGCATTTGGATCAATTATACGTGCAGTTAATTGTGTCTGGGCTATACAAGTGTGGTTTCTTGGTTATCAAATTTGTCAATGCATGTTTGCATCTCAGAGATGTTAACTACGCGCATAAGGTTTTTCGTGAAGTCTTAGAACCAGATATCTTGTTGTGGAATGGCATCATAAAGGGCTACACTCAGAACAATATTTTTGCTGGTGCTATCAGAATGTATAAGGATATGCAAGTGTCAGGGGTGAACCCAGATTGCTTCACATTTTTGTATGTGCTTAAAGCGTGCGGTGGAATGTCGGTTGAAGGAATAGGTAAACAGATGCATAGCCAGACGTTTAAATATGGCTTTGGATCAAATGTGTTTGTGCAGAACAGTCTTGTGTCAATGTATGCTAGATATGGCCAAACCTCATCTGCTAGACTCGTCTTCGATAAGTTACATAATAGAACTGTTGTTTCGTGGACGTCCATCATTTCTGGGTATGTTCAGAATGGCGATCCCATGGACGCGTTGAGAGTTTTCAAAGATATGAGGCAAAGTACTGTGAAACTTGATTGGATTGTCCTTGTTAGTGTTATGACAGCCTACACAGACATGGAGGATTTGGGGCAAGGAAAAGCCATCCATAGCTTAGTGACTAAATTGGGTCTAGAATTTGAACCCGATATAGTGGTCTCGCTCACTAACATGTATGCTAAACTTGGACGGGTGGAAATTGCTAGATTTTTCTTTAATCAGATGGAAAAACCAAATTTACTTTTGTGGAATGCTATGATTTCTGGTTATGCAAAAAATGGATATGGTGAAGAAGCAATCGAGCTATTCCGTAAGATGATTTCAAAGAATATCGGGGTCGATTCTGTTACTGTGAGGTCTGCTATTCTAGCCGTTGCCCAAGTGGGGTCTCTTGAACTAGCAAGATGGTTGGATGGTTATATCTCTAAGAGTGAGTACCGAGACGATGTTTTCGTGAACACAGCCCTTATAGATATGCATGCAAAATGTGGAAGCATATGTTTTGCTCGTAGTGTTTTCGATAGAATGGTCGATAAAGACATTGTCTCATGGAGTGCTATGATTATGGGGTATGGATTACACGGTCATGGACAAGAAGCCATCGACCTTTACAACAGAATGAAGCAATCTGGAATTCGTCCGAACGACGTTACTTTTGTTGGCCTTCTCACAGCATGTAAAAACTCGGGTCTTGTAAAAGAGGGATGGGAGCTTTTCCACCAGATGCAAGACCACGGGATTGAACCGCATCACCAGCATTACTCTTGCGTGGTCGATCTTCTGGGACGTGCAGGCTATTTGAATCGAGCTTATGATTTTATTATGAGCATGCCCATTAAACCTGGAGTTAGTGTTTGGGGGGCACTTTTAAGTGGATGTAAGATCCATCGTCAAGTGAGGTTGGGAGAGATAGCTGCAGAACAGCTTTTCTTATTAGATCCATATAATACAGGTCATTATGTACAACTCTCAAACTTATATGCTTCTGCCCATTTATGGAACCAAGTGGCGAACGTTCGATTAATGATGACGCAGAAAGGACTGAACAAGGACCTCGGACATAGTTCGATTGAGATCAATGGAAATCTCGAAACGTTCCATGTTGGAGATAGATCACATCCGAGATCGAAGGAAATCTTTGAAGAACTTGATAGATTGGAGAGGAGATTAAAGGCAGCTGGTTATGTTGCTCATATGGAATCTGTTCTACATGACTTGAATCATGAGGAGATTGAGGAAACTCTTTGTAACCATAGTGAGAGGTTAGCAGTTGCTTATGGCATCATCAGTACTGCTCCTGGAACAACACTTAGAATAACGAAAAATCTCCGTGCATGCGTTAATTGCCATTCAGCGATAAAGCTAATATCGAAGCTTGTCGATAGGGAAATAATTATTCGAGATGGGAAACGCTTTCATCATTTCAAAGATGGAGTTTGTTCGTGCGGAGATTTTTGGTGAAGCTTGGTTAGTATTCTTTACTGACTTCAACCTTACACGTAATGAATTTGCTGATTTTCTTTTGGCCTATACTAACCATCCTTGATTCTGATGTGAAATTGAAGAAAGTCCAATTTTTCTGTGAAATGGTAACCAATCCATTGCCCCTTCATGTGCCTTTTTTTTCAATGTTCAAGTTTGATCTATTATAATTTTCTGTTTGAGATGCTTCCGAACATTCTATTTTAGTTATATTGGAGAAAAACATGTCAAATTTTTGTTATGCATTTTAATAAGAATTCTACCTGGCATCACATGAATTTATGTGATAATTTTTCTTGTCGAAGTTAATTGATTCACTCTGAAGGTTAGGATTTAGATCGATAGAACTCTAACTTCTAGTTAAGAATATATATTTTAATTAGTTACCTCTAGTTAAGAATGTATATCTTAATTAGTTAAGTTTTGCTGACTAGCGATTCGGAAGAACTCTGACCTCTAGTTAAGAATAGTTAAGTTTTGCTGATGGGCGATGCGGAGTTGGGTTGTGGTGCCTAACGGCGCCCTAACCTAGATCCCACAAAGAGTTTTGGTCAATTAAGACGACAGAGCGGTGGTTATGGAACTCGAAATTTGCTGAGGATTTATACCCAACCGTTTGAACAAATTAGTTTATCAATCTATGAAGCCATCCATCCAACCATCTATCTATTGATTTTACAATAACATCAGAAGTAGTTTCTCTAACATTTTCTTAAATTTTAGGTTTGCAAGAACTAAATTCATGCTTCCTTTAAATTTAATCACAAGTTTTGCCATTTACGACCTCTTATAACACGGTATTAAAAATCATCCAACTAAATAAGTTGCAAACAACTTTTCAAGTTCTTAAAATCTTAAAAGTGGAAGGTGGTGGGATTGTCAACATTTAGCAATGGCTAATGGATACTCATTGACCAATTGAGATTGAATGGCTCACAACATGAAAGCTGGTGTTGGGTAATATGATTGAACTCTTCCAAAGATTCAAAGGGAAAATAATGGGTTTAGTTAATGATGAAGAAGATTGTGGTTTTGTGGTTAAAGTAGCTGCAACTCAAACACTGTTCACTGAAATTTCAAGTGTTCAAAACCACTATGTCCTAATCAAAGCGTAGACTAAGTCAATATCAACCACTCACCACTCTATATTCATCACATGCTTTCCATTAGGGTTTAAACTTTTATTATGGTTTGCCTCTGCTCCTAACTTTCTTTTTCTTTTGTTATTATTGTTTTCTGTACACTTTTCTAGAGTCACATTATTTATTAACCTCTAGAGAGCTAGGCCATTGAAATTTAAACCATTTGCTTTAGTGGTTAAATCATAGTGAATCAAAAAAGAAAACAAAACATGAACGAGTTTATAGATCAGAAGTTTGAATCACTACCCTCAAATAAATATTATGAACTCTAAAAAAACATGTTTTTAAGCTTCAAACTCACTTATTTTCCCCTACAGTTAATCCAAAAGGCACGAGGAAGATCTTCAAAGACAGATTCTATAGACTCCCATTAGTGCAAGCAAACATTGAATAAGTCTGTGTCACAACTCTACAATTGGATCCACACCTACCCAATTCATTAAATAAGCAGCAGCACATGGCGTTACCTGAAGAAGCAAGTTTAATGTGGTTGAATACACCACTTAGATGCAGGCAGAGGGGAACTGACTTTTTGACCTGAAAGAAGAGTTCAAATGATTCAGATCACACCATTAGATTAAGATATTCAAAACAAAGCACATTCTCCATGAACAAGGCTTTGGATTGGACTCATGCATAAGTGACATTTTTCCCAATCACTTTTCTCTCTATTTGGACAACTTATTTGCTTTCAAACTAGTTACCCATTCAAACCTGCAAGACCCATTAGACAAGACATAAGAAGTGAGCAGATGAAGACATCTCACCAATCAAAAATATATCTACAAGAAATTCAAGGAAAGAAGAAACTTGTAAAAGTTATTAATTTATTTGAATAAATGATCATCGGAAGCTTATTTATGTGGTAGATATCATATCAATGTAAAGATATCAAGAGCTACATTTTATTTTCACGAG

mRNA sequence

ATGGGGTCCATCCTCGCCGGCCGCCGCCATATCACCTCAGTCTCTCAAGCTGCTGCAATCTTCCTCGGACTTCCAGCCATGTCTTTGCATTCATTTTCGCTCTCTCTCTCCTTGACGTCGCTATCTACAGCTCTCTCAAAGGCGGCGGCAACCTCGCAAGAGGCTTTATTGAGGAGGAAGCATTTGGATCAATTATACGTGCAGTTAATTGTGTCTGGGCTATACAAGTGTGGTTTCTTGGTTATCAAATTTGTCAATGCATGTTTGCATCTCAGAGATGTTAACTACGCGCATAAGGTTTTTCGTGAAGTCTTAGAACCAGATATCTTGTTGTGGAATGGCATCATAAAGGGCTACACTCAGAACAATATTTTTGCTGGTGCTATCAGAATGTATAAGGATATGCAAGTGTCAGGGGTGAACCCAGATTGCTTCACATTTTTGTATGTGCTTAAAGCGTGCGGTGGAATGTCGGTTGAAGGAATAGGTAAACAGATGCATAGCCAGACGTTTAAATATGGCTTTGGATCAAATGTGTTTGTGCAGAACAGTCTTGTGTCAATGTATGCTAGATATGGCCAAACCTCATCTGCTAGACTCGTCTTCGATAAGTTACATAATAGAACTGTTGTTTCGTGGACGTCCATCATTTCTGGGTATGTTCAGAATGGCGATCCCATGGACGCGTTGAGAGTTTTCAAAGATATGAGGCAAAGTACTGTGAAACTTGATTGGATTGTCCTTGTTAGTGTTATGACAGCCTACACAGACATGGAGGATTTGGGGCAAGGAAAAGCCATCCATAGCTTAGTGACTAAATTGGGTCTAGAATTTGAACCCGATATAGTGGTCTCGCTCACTAACATGTATGCTAAACTTGGACGGGTGGAAATTGCTAGATTTTTCTTTAATCAGATGGAAAAACCAAATTTACTTTTGTGGAATGCTATGATTTCTGGTTATGCAAAAAATGGATATGGTGAAGAAGCAATCGAGCTATTCCGTAAGATGATTTCAAAGAATATCGGGGTCGATTCTGTTACTGTGAGGTCTGCTATTCTAGCCGTTGCCCAAGTGGGGTCTCTTGAACTAGCAAGATGGTTGGATGGTTATATCTCTAAGAGTGAGTACCGAGACGATGTTTTCGTGAACACAGCCCTTATAGATATGCATGCAAAATGTGGAAGCATATGTTTTGCTCGTAGTGTTTTCGATAGAATGGTCGATAAAGACATTGTCTCATGGAGTGCTATGATTATGGGGTATGGATTACACGGTCATGGACAAGAAGCCATCGACCTTTACAACAGAATGAAGCAATCTGGAATTCGTCCGAACGACGTTACTTTTGTTGGCCTTCTCACAGCATGTAAAAACTCGGGTCTTGTAAAAGAGGGATGGGAGCTTTTCCACCAGATGCAAGACCACGGGATTGAACCGCATCACCAGCATTACTCTTGCGTGGTCGATCTTCTGGGACGTGCAGGCTATTTGAATCGAGCTTATGATTTTATTATGAGCATGCCCATTAAACCTGGAGTTAGTGTTTGGGGGGCACTTTTAAGTGGATGTAAGATCCATCGTCAAGTGAGGTTGGGAGAGATAGCTGCAGAACAGCTTTTCTTATTAGATCCATATAATACAGGTCATTATGTACAACTCTCAAACTTATATGCTTCTGCCCATTTATGGAACCAAGTGGCGAACGTTCGATTAATGATGACGCAGAAAGGACTGAACAAGGACCTCGGACATAGTTCGATTGAGATCAATGGAAATCTCGAAACGTTCCATGTTGGAGATAGATCACATCCGAGATCGAAGGAAATCTTTGAAGAACTTGATAGATTGGAGAGGAGATTAAAGGCAGCTGGTTATGTTGCTCATATGGAATCTGTTCTACATGACTTGAATCATGAGGAGATTGAGGAAACTCTTTGTAACCATAGTGAGAGGTTAGCAGTTGCTTATGGCATCATCAGTACTGCTCCTGGAACAACACTTAGAATAACGAAAAATCTCCGTGCATGCGTTAATTGCCATTCAGCGATAAAGCTAATATCGAAGCTTGTCGATAGGGAAATAATTATTCGAGATGGGAAACGCTTTCATCATTTCAAAGATGGAGTTTGTTCGTGCGGAGATTTTTGGTGAAGCTTGTTAATCCAAAAGGCACGAGGAAGATCTTCAAAGACAGATTCTATAGACTCCCATTAGTGCAAGCAAACATTGAATAAGTCTGTGTCACAACTCTACAATTGGATCCACACCTACCCAATTCATTAAATAAGCAGCAGCACATGGCGTTACCTGAAGAAGCAAGTTTAATGTGGTTGAATACACCACTTAGATGCAGGCAGAGGGGAACTGACTTTTTGACCTGAAAGAAGAGTTCAAATGATTCAGATCACACCATTAGATTAAGATATTCAAAACAAAGCACATTCTCCATGAACAAGGCTTTGGATTGGACTCATGCATAAGTGACATTTTTCCCAATCACTTTTCTCTCTATTTGGACAACTTATTTGCTTTCAAACTAGTTACCCATTCAAACCTGCAAGACCCATTAGACAAGACATAAGAAGTGAGCAGATGAAGACATCTCACCAATCAAAAATATATCTACAAGAAATTCAAGGAAAGAAGAAACTTGTAAAAGTTATTAATTTATTTGAATAAATGATCATCGGAAGCTTATTTATGTGGTAGATATCATATCAATGTAAAGATATCAAGAGCTACATTTTATTTTCACGAG

Coding sequence (CDS)

ATGGGGTCCATCCTCGCCGGCCGCCGCCATATCACCTCAGTCTCTCAAGCTGCTGCAATCTTCCTCGGACTTCCAGCCATGTCTTTGCATTCATTTTCGCTCTCTCTCTCCTTGACGTCGCTATCTACAGCTCTCTCAAAGGCGGCGGCAACCTCGCAAGAGGCTTTATTGAGGAGGAAGCATTTGGATCAATTATACGTGCAGTTAATTGTGTCTGGGCTATACAAGTGTGGTTTCTTGGTTATCAAATTTGTCAATGCATGTTTGCATCTCAGAGATGTTAACTACGCGCATAAGGTTTTTCGTGAAGTCTTAGAACCAGATATCTTGTTGTGGAATGGCATCATAAAGGGCTACACTCAGAACAATATTTTTGCTGGTGCTATCAGAATGTATAAGGATATGCAAGTGTCAGGGGTGAACCCAGATTGCTTCACATTTTTGTATGTGCTTAAAGCGTGCGGTGGAATGTCGGTTGAAGGAATAGGTAAACAGATGCATAGCCAGACGTTTAAATATGGCTTTGGATCAAATGTGTTTGTGCAGAACAGTCTTGTGTCAATGTATGCTAGATATGGCCAAACCTCATCTGCTAGACTCGTCTTCGATAAGTTACATAATAGAACTGTTGTTTCGTGGACGTCCATCATTTCTGGGTATGTTCAGAATGGCGATCCCATGGACGCGTTGAGAGTTTTCAAAGATATGAGGCAAAGTACTGTGAAACTTGATTGGATTGTCCTTGTTAGTGTTATGACAGCCTACACAGACATGGAGGATTTGGGGCAAGGAAAAGCCATCCATAGCTTAGTGACTAAATTGGGTCTAGAATTTGAACCCGATATAGTGGTCTCGCTCACTAACATGTATGCTAAACTTGGACGGGTGGAAATTGCTAGATTTTTCTTTAATCAGATGGAAAAACCAAATTTACTTTTGTGGAATGCTATGATTTCTGGTTATGCAAAAAATGGATATGGTGAAGAAGCAATCGAGCTATTCCGTAAGATGATTTCAAAGAATATCGGGGTCGATTCTGTTACTGTGAGGTCTGCTATTCTAGCCGTTGCCCAAGTGGGGTCTCTTGAACTAGCAAGATGGTTGGATGGTTATATCTCTAAGAGTGAGTACCGAGACGATGTTTTCGTGAACACAGCCCTTATAGATATGCATGCAAAATGTGGAAGCATATGTTTTGCTCGTAGTGTTTTCGATAGAATGGTCGATAAAGACATTGTCTCATGGAGTGCTATGATTATGGGGTATGGATTACACGGTCATGGACAAGAAGCCATCGACCTTTACAACAGAATGAAGCAATCTGGAATTCGTCCGAACGACGTTACTTTTGTTGGCCTTCTCACAGCATGTAAAAACTCGGGTCTTGTAAAAGAGGGATGGGAGCTTTTCCACCAGATGCAAGACCACGGGATTGAACCGCATCACCAGCATTACTCTTGCGTGGTCGATCTTCTGGGACGTGCAGGCTATTTGAATCGAGCTTATGATTTTATTATGAGCATGCCCATTAAACCTGGAGTTAGTGTTTGGGGGGCACTTTTAAGTGGATGTAAGATCCATCGTCAAGTGAGGTTGGGAGAGATAGCTGCAGAACAGCTTTTCTTATTAGATCCATATAATACAGGTCATTATGTACAACTCTCAAACTTATATGCTTCTGCCCATTTATGGAACCAAGTGGCGAACGTTCGATTAATGATGACGCAGAAAGGACTGAACAAGGACCTCGGACATAGTTCGATTGAGATCAATGGAAATCTCGAAACGTTCCATGTTGGAGATAGATCACATCCGAGATCGAAGGAAATCTTTGAAGAACTTGATAGATTGGAGAGGAGATTAAAGGCAGCTGGTTATGTTGCTCATATGGAATCTGTTCTACATGACTTGAATCATGAGGAGATTGAGGAAACTCTTTGTAACCATAGTGAGAGGTTAGCAGTTGCTTATGGCATCATCAGTACTGCTCCTGGAACAACACTTAGAATAACGAAAAATCTCCGTGCATGCGTTAATTGCCATTCAGCGATAAAGCTAATATCGAAGCTTGTCGATAGGGAAATAATTATTCGAGATGGGAAACGCTTTCATCATTTCAAAGATGGAGTTTGTTCGTGCGGAGATTTTTGGTGA

Protein sequence

MGSILAGRRHITSVSQAAAIFLGLPAMSLHSFSLSLSLTSLSTALSKAAATSQEALLRRKHLDQLYVQLIVSGLYKCGFLVIKFVNACLHLRDVNYAHKVFREVLEPDILLWNGIIKGYTQNNIFAGAIRMYKDMQVSGVNPDCFTFLYVLKACGGMSVEGIGKQMHSQTFKYGFGSNVFVQNSLVSMYARYGQTSSARLVFDKLHNRTVVSWTSIISGYVQNGDPMDALRVFKDMRQSTVKLDWIVLVSVMTAYTDMEDLGQGKAIHSLVTKLGLEFEPDIVVSLTNMYAKLGRVEIARFFFNQMEKPNLLLWNAMISGYAKNGYGEEAIELFRKMISKNIGVDSVTVRSAILAVAQVGSLELARWLDGYISKSEYRDDVFVNTALIDMHAKCGSICFARSVFDRMVDKDIVSWSAMIMGYGLHGHGQEAIDLYNRMKQSGIRPNDVTFVGLLTACKNSGLVKEGWELFHQMQDHGIEPHHQHYSCVVDLLGRAGYLNRAYDFIMSMPIKPGVSVWGALLSGCKIHRQVRLGEIAAEQLFLLDPYNTGHYVQLSNLYASAHLWNQVANVRLMMTQKGLNKDLGHSSIEINGNLETFHVGDRSHPRSKEIFEELDRLERRLKAAGYVAHMESVLHDLNHEEIEETLCNHSERLAVAYGIISTAPGTTLRITKNLRACVNCHSAIKLISKLVDREIIIRDGKRFHHFKDGVCSCGDFW
Homology
[Close]
BLAST of CmaCh04G002740 vs. Swiss-Prot
Match: PP224_ARATH (Pentatricopeptide repeat-containing protein At3g12770 OS=Arabidopsis thaliana GN=PCMP-H43 PE=2 SV=1)

HSP 1 Score: 832.0 bits (2148), Expect = 4.9e-240
Identity = 384/666 (57.66%), Postives = 517/666 (77.63%), Query Frame = 1 

Query: 54  EALLRRKHLDQLYVQLIVSGLYKCGFLVIKFVNACLHLRDVNYAHKVFREVLEPDILLWN 113
           ++   +  L Q++ +L+V GL   GFL+ K ++A     D+ +A +VF ++  P I  WN
Sbjct: 29  DSATHKAQLKQIHARLLVLGLQFSGFLITKLIHASSSFGDITFARQVFDDLPRPQIFPWN 88

Query: 114 GIIKGYTQNNIFAGAIRMYKDMQVSGVNPDCFTFLYVLKACGGMSVEGIGKQMHSQTFKY 173
            II+GY++NN F  A+ MY +MQ++ V+PD FTF ++LKAC G+S   +G+ +H+Q F+ 
Sbjct: 89  AIIRGYSRNNHFQDALLMYSNMQLARVSPDSFTFPHLLKACSGLSHLQMGRFVHAQVFRL 148

Query: 174 GFGSNVFVQNSLVSMYARYGQTSSARLVFD--KLHNRTVVSWTSIISGYVQNGDPMDALR 233
           GF ++VFVQN L+++YA+  +  SAR VF+   L  RT+VSWT+I+S Y QNG+PM+AL 
Sbjct: 149 GFDADVFVQNGLIALYAKCRRLGSARTVFEGLPLPERTIVSWTAIVSAYAQNGEPMEALE 208

Query: 234 VFKDMRQSTVKLDWIVLVSVMTAYTDMEDLGQGKAIHSLVTKLGLEFEPDIVVSLTNMYA 293
           +F  MR+  VK DW+ LVSV+ A+T ++DL QG++IH+ V K+GLE EPD+++SL  MYA
Sbjct: 209 IFSQMRKMDVKPDWVALVSVLNAFTCLQDLKQGRSIHASVVKMGLEIEPDLLISLNTMYA 268

Query: 294 KLGRVEIARFFFNQMEKPNLLLWNAMISGYAKNGYGEEAIELFRKMISKNIGVDSVTVRS 353
           K G+V  A+  F++M+ PNL+LWNAMISGYAKNGY  EAI++F +MI+K++  D++++ S
Sbjct: 269 KCGQVATAKILFDKMKSPNLILWNAMISGYAKNGYAREAIDMFHEMINKDVRPDTISITS 328

Query: 354 AILAVAQVGSLELARWLDGYISKSEYRDDVFVNTALIDMHAKCGSICFARSVFDRMVDKD 413
           AI A AQVGSLE AR +  Y+ +S+YRDDVF+++ALIDM AKCGS+  AR VFDR +D+D
Sbjct: 329 AISACAQVGSLEQARSMYEYVGRSDYRDDVFISSALIDMFAKCGSVEGARLVFDRTLDRD 388

Query: 414 IVSWSAMIMGYGLHGHGQEAIDLYNRMKQSGIRPNDVTFVGLLTACKNSGLVKEGWELFH 473
           +V WSAMI+GYGLHG  +EAI LY  M++ G+ PNDVTF+GLL AC +SG+V+EGW  F+
Sbjct: 389 VVVWSAMIVGYGLHGRAREAISLYRAMERGGVHPNDVTFLGLLMACNHSGMVREGWWFFN 448

Query: 474 QMQDHGIEPHHQHYSCVVDLLGRAGYLNRAYDFIMSMPIKPGVSVWGALLSGCKIHRQVR 533
           +M DH I P  QHY+CV+DLLGRAG+L++AY+ I  MP++PGV+VWGALLS CK HR V 
Sbjct: 449 RMADHKINPQQQHYACVIDLLGRAGHLDQAYEVIKCMPVQPGVTVWGALLSACKKHRHVE 508

Query: 534 LGEIAAEQLFLLDPYNTGHYVQLSNLYASAHLWNQVANVRLMMTQKGLNKDLGHSSIEIN 593
           LGE AA+QLF +DP NTGHYVQLSNLYA+A LW++VA VR+ M +KGLNKD+G S +E+ 
Sbjct: 509 LGEYAAQQLFSIDPSNTGHYVQLSNLYAAARLWDRVAEVRVRMKEKGLNKDVGCSWVEVR 568

Query: 594 GNLETFHVGDRSHPRSKEIFEELDRLERRLKAAGYVAHMESVLHDLNHEEIEETLCNHSE 653
           G LE F VGD+SHPR +EI  +++ +E RLK  G+VA+ ++ LHDLN EE EETLC+HSE
Sbjct: 569 GRLEAFRVGDKSHPRYEEIERQVEWIESRLKEGGFVANKDASLHDLNDEEAEETLCSHSE 628

Query: 654 RLAVAYGIISTAPGTTLRITKNLRACVNCHSAIKLISKLVDREIIIRDGKRFHHFKDGVC 713
           R+A+AYG+IST  GT LRITKNLRACVNCH+A KLISKLVDREI++RD  RFHHFKDGVC
Sbjct: 629 RIAIAYGLISTPQGTPLRITKNLRACVNCHAATKLISKLVDREIVVRDTNRFHHFKDGVC 688

Query: 714 SCGDFW 718
           SCGD+W
Sbjct: 689 SCGDYW 694

[Close]
BLAST of CmaCh04G002740 vs. Swiss-Prot
Match: PPR32_ARATH (Pentatricopeptide repeat-containing protein At1g11290, chloroplastic OS=Arabidopsis thaliana GN=PCMP-H40 PE=2 SV=1)

HSP 1 Score: 547.4 bits (1409), Expect = 2.4e-154
Identity = 269/655 (41.07%), Postives = 411/655 (62.75%), Query Frame = 1 

Query: 64  QLYVQLIVSGLYKCGFLVIKFVNACLHLRDVNYAHKVFREVLEPDILLWNGIIKGYTQNN 123
           +++  L+ SG     F +    N     R VN A KVF  + E D++ WN I+ GY+QN 
Sbjct: 156 EIHGLLVKSGFSLDLFAMTGLENMYAKCRQVNEARKVFDRMPERDLVSWNTIVAGYSQNG 215

Query: 124 IFAGAIRMYKDMQVSGVNPDCFTFLYVLKACGGMSVEGIGKQMHSQTFKYGFGSNVFVQN 183
           +   A+ M K M    + P   T + VL A   + +  +GK++H    + GF S V +  
Sbjct: 216 MARMALEMVKSMCEENLKPSFITIVSVLPAVSALRLISVGKEIHGYAMRSGFDSLVNIST 275

Query: 184 SLVSMYARYGQTSSARLVFDKLHNRTVVSWTSIISGYVQNGDPMDALRVFKDMRQSTVKL 243
           +LV MYA+ G   +AR +FD +  R VVSW S+I  YVQN +P +A+ +F+ M    VK 
Sbjct: 276 ALVDMYAKCGSLETARQLFDGMLERNVVSWNSMIDAYVQNENPKEAMLIFQKMLDEGVKP 335

Query: 244 DWIVLVSVMTAYTDMEDLGQGKAIHSLVTKLGLEFEPDIVVSLTNMYAKLGRVEIARFFF 303
             + ++  + A  D+ DL +G+ IH L  +LGL+    +V SL +MY K   V+ A   F
Sbjct: 336 TDVSVMGALHACADLGDLERGRFIHKLSVELGLDRNVSVVNSLISMYCKCKEVDTAASMF 395

Query: 304 NQMEKPNLLLWNAMISGYAKNGYGEEAIELFRKMISKNIGVDSVTVRSAILAVAQVGSLE 363
            +++   L+ WNAMI G+A+NG   +A+  F +M S+ +  D+ T  S I A+A++    
Sbjct: 396 GKLQSRTLVSWNAMILGFAQNGRPIDALNYFSQMRSRTVKPDTFTYVSVITAIAELSITH 455

Query: 364 LARWLDGYISKSEYRDDVFVNTALIDMHAKCGSICFARSVFDRMVDKDIVSWSAMIMGYG 423
            A+W+ G + +S    +VFV TAL+DM+AKCG+I  AR +FD M ++ + +W+AMI GYG
Sbjct: 456 HAKWIHGVVMRSCLDKNVFVTTALVDMYAKCGAIMIARLIFDMMSERHVTTWNAMIDGYG 515

Query: 424 LHGHGQEAIDLYNRMKQSGIRPNDVTFVGLLTACKNSGLVKEGWELFHQM-QDHGIEPHH 483
            HG G+ A++L+  M++  I+PN VTF+ +++AC +SGLV+ G + F+ M +++ IE   
Sbjct: 516 THGFGKAALELFEEMQKGTIKPNGVTFLSVISACSHSGLVEAGLKCFYMMKENYSIELSM 575

Query: 484 QHYSCVVDLLGRAGYLNRAYDFIMSMPIKPGVSVWGALLSGCKIHRQVRLGEIAAEQLFL 543
            HY  +VDLLGRAG LN A+DFIM MP+KP V+V+GA+L  C+IH+ V   E AAE+LF 
Sbjct: 576 DHYGAMVDLLGRAGRLNEAWDFIMQMPVKPAVNVYGAMLGACQIHKNVNFAEKAAERLFE 635

Query: 544 LDPYNTGHYVQLSNLYASAHLWNQVANVRLMMTQKGLNKDLGHSSIEINGNLETFHVGDR 603
           L+P + G++V L+N+Y +A +W +V  VR+ M ++GL K  G S +EI   + +F  G  
Sbjct: 636 LNPDDGGYHVLLANIYRAASMWEKVGQVRVSMLRQGLRKTPGCSMVEIKNEVHSFFSGST 695

Query: 604 SHPRSKEIFEELDRLERRLKAAGYVAHMESVLHDLNHEEIEETLCNHSERLAVAYGIIST 663
           +HP SK+I+  L++L   +K AGYV     VL  + ++  E+ L  HSE+LA+++G+++T
Sbjct: 696 AHPDSKKIYAFLEKLICHIKEAGYVPDTNLVL-GVENDVKEQLLSTHSEKLAISFGLLNT 755

Query: 664 APGTTLRITKNLRACVNCHSAIKLISKLVDREIIIRDGKRFHHFKDGVCSCGDFW 718
             GTT+ + KNLR C +CH+A K IS +  REI++RD +RFHHFK+G CSCGD+W
Sbjct: 756 TAGTTIHVRKNLRVCADCHNATKYISLVTGREIVVRDMQRFHHFKNGACSCGDYW 809

[Close]
BLAST of CmaCh04G002740 vs. Swiss-Prot
Match: PP258_ARATH (Pentatricopeptide repeat-containing protein At3g26782, mitochondrial OS=Arabidopsis thaliana GN=PCMP-H34 PE=2 SV=1)

HSP 1 Score: 547.0 bits (1408), Expect = 3.1e-154
Identity = 267/626 (42.65%), Postives = 406/626 (64.86%), Query Frame = 1 

Query: 102 REVLEPDILLWNGIIKGYTQNNIFAGAIRMYKDMQVSGVNPDCFTFLYVLKACGGMSVEG 161
           R V + D+  WN +I    ++   A A+  +  M+   + P   +F   +KAC  +    
Sbjct: 34  RYVDKTDVFSWNSVIADLARSGDSAEALLAFSSMRKLSLYPTRSSFPCAIKACSSLFDIF 93

Query: 162 IGKQMHSQTFKYGFGSNVFVQNSLVSMYARYGQTSSARLVFDKLHNRTVVSWTSIISGYV 221
            GKQ H Q F +G+ S++FV ++L+ MY+  G+   AR VFD++  R +VSWTS+I GY 
Sbjct: 94  SGKQTHQQAFVFGYQSDIFVSSALIVMYSTCGKLEDARKVFDEIPKRNIVSWTSMIRGYD 153

Query: 222 QNGDPMDALRVFKDMR------QSTVKLDWIVLVSVMTAYTDMEDLGQGKAIHSLVTKLG 281
            NG+ +DA+ +FKD+          + LD + LVSV++A + +   G  ++IHS V K G
Sbjct: 154 LNGNALDAVSLFKDLLVDENDDDDAMFLDSMGLVSVISACSRVPAKGLTESIHSFVIKRG 213

Query: 282 LEFEPDIVVSLTNMYAKLGR--VEIARFFFNQMEKPNLLLWNAMISGYAKNGYGEEAIEL 341
            +    +  +L + YAK G   V +AR  F+Q+   + + +N+++S YA++G   EA E+
Sbjct: 214 FDRGVSVGNTLLDAYAKGGEGGVAVARKIFDQIVDKDRVSYNSIMSVYAQSGMSNEAFEV 273

Query: 342 FRKMI-SKNIGVDSVTVRSAILAVAQVGSLELARWLDGYISKSEYRDDVFVNTALIDMHA 401
           FR+++ +K +  +++T+ + +LAV+  G+L + + +   + +    DDV V T++IDM+ 
Sbjct: 274 FRRLVKNKVVTFNAITLSTVLLAVSHSGALRIGKCIHDQVIRMGLEDDVIVGTSIIDMYC 333

Query: 402 KCGSICFARSVFDRMVDKDIVSWSAMIMGYGLHGHGQEAIDLYNRMKQSGIRPNDVTFVG 461
           KCG +  AR  FDRM +K++ SW+AMI GYG+HGH  +A++L+  M  SG+RPN +TFV 
Sbjct: 334 KCGRVETARKAFDRMKNKNVRSWTAMIAGYGMHGHAAKALELFPAMIDSGVRPNYITFVS 393

Query: 462 LLTACKNSGLVKEGWELFHQMQDH-GIEPHHQHYSCVVDLLGRAGYLNRAYDFIMSMPIK 521
           +L AC ++GL  EGW  F+ M+   G+EP  +HY C+VDLLGRAG+L +AYD I  M +K
Sbjct: 394 VLAACSHAGLHVEGWRWFNAMKGRFGVEPGLEHYGCMVDLLGRAGFLQKAYDLIQRMKMK 453

Query: 522 PGVSVWGALLSGCKIHRQVRLGEIAAEQLFLLDPYNTGHYVQLSNLYASAHLWNQVANVR 581
           P   +W +LL+ C+IH+ V L EI+  +LF LD  N G+Y+ LS++YA A  W  V  VR
Sbjct: 454 PDSIIWSSLLAACRIHKNVELAEISVARLFELDSSNCGYYMLLSHIYADAGRWKDVERVR 513

Query: 582 LMMTQKGLNKDLGHSSIEINGNLETFHVGDRSHPRSKEIFEELDRLERRLKAAGYVAHME 641
           ++M  +GL K  G S +E+NG +  F +GD  HP+ ++I+E L  L R+L  AGYV++  
Sbjct: 514 MIMKNRGLVKPPGFSLLELNGEVHVFLIGDEEHPQREKIYEFLAELNRKLLEAGYVSNTS 573

Query: 642 SVLHDLNHEEIEETLCNHSERLAVAYGIISTAPGTTLRITKNLRACVNCHSAIKLISKLV 701
           SV HD++ EE E TL  HSE+LA+A+GI++T PG+T+ + KNLR C +CH+ IKLISK+V
Sbjct: 574 SVCHDVDEEEKEMTLRVHSEKLAIAFGIMNTVPGSTVNVVKNLRVCSDCHNVIKLISKIV 633

Query: 702 DREIIIRDGKRFHHFKDGVCSCGDFW 718
           DRE ++RD KRFHHFKDG CSCGD+W
Sbjct: 634 DREFVVRDAKRFHHFKDGGCSCGDYW 659

[Close]
BLAST of CmaCh04G002740 vs. Swiss-Prot
Match: PP341_ARATH (Pentatricopeptide repeat-containing protein At4g30700 OS=Arabidopsis thaliana GN=DYW9 PE=2 SV=1)

HSP 1 Score: 521.9 bits (1343), Expect = 1.1e-146
Identity = 262/626 (41.85%), Postives = 390/626 (62.30%), Query Frame = 1 

Query: 94  VNYAHKVFREVLEPDILLWNGIIKGYTQNNIFAGAIRMYKDM-QVSGVNPDCFTFLYVLK 153
           V  A KVF  + E D +LWN +I GY +N ++  +I++++D+   S    D  T L +L 
Sbjct: 170 VEDARKVFDRMPEKDTILWNTMISGYRKNEMYVESIQVFRDLINESCTRLDTTTLLDILP 229

Query: 154 ACGGMSVEGIGKQMHSQTFKYGFGSNVFVQNSLVSMYARYGQTSSARLVFDKLHNRTVVS 213
           A   +    +G Q+HS   K G  S+ +V    +S+Y++ G+      +F +     +V+
Sbjct: 230 AVAELQELRLGMQIHSLATKTGCYSHDYVLTGFISLYSKCGKIKMGSALFREFRKPDIVA 289

Query: 214 WTSIISGYVQNGDPMDALRVFKDMRQSTVKLDWIVLVSVMTAYTDMEDLGQGKAIHSLVT 273
           + ++I GY  NG+   +L +FK++  S  +L    LVS++     +  +    AIH    
Sbjct: 290 YNAMIHGYTSNGETELSLSLFKELMLSGARLRSSTLVSLVPVSGHLMLI---YAIHGYCL 349

Query: 274 KLGLEFEPDIVVSLTNMYAKLGRVEIARFFFNQMEKPNLLLWNAMISGYAKNGYGEEAIE 333
           K        +  +LT +Y+KL  +E AR  F++  + +L  WNAMISGY +NG  E+AI 
Sbjct: 350 KSNFLSHASVSTALTTVYSKLNEIESARKLFDESPEKSLPSWNAMISGYTQNGLTEDAIS 409

Query: 334 LFRKMISKNIGVDSVTVRSAILAVAQVGSLELARWLDGYISKSEYRDDVFVNTALIDMHA 393
           LFR+M       + VT+   + A AQ+G+L L +W+   +  +++   ++V+TALI M+A
Sbjct: 410 LFREMQKSEFSPNPVTITCILSACAQLGALSLGKWVHDLVRSTDFESSIYVSTALIGMYA 469

Query: 394 KCGSICFARSVFDRMVDKDIVSWSAMIMGYGLHGHGQEAIDLYNRMKQSGIRPNDVTFVG 453
           KCGSI  AR +FD M  K+ V+W+ MI GYGLHG GQEA++++  M  SGI P  VTF+ 
Sbjct: 470 KCGSIAEARRLFDLMTKKNEVTWNTMISGYGLHGQGQEALNIFYEMLNSGITPTPVTFLC 529

Query: 454 LLTACKNSGLVKEGWELFHQM-QDHGIEPHHQHYSCVVDLLGRAGYLNRAYDFIMSMPIK 513
           +L AC ++GLVKEG E+F+ M   +G EP  +HY+C+VD+LGRAG+L RA  FI +M I+
Sbjct: 530 VLYACSHAGLVKEGDEIFNSMIHRYGFEPSVKHYACMVDILGRAGHLQRALQFIEAMSIE 589

Query: 514 PGVSVWGALLSGCKIHRQVRLGEIAAEQLFLLDPYNTGHYVQLSNLYASAHLWNQVANVR 573
           PG SVW  LL  C+IH+   L    +E+LF LDP N G++V LSN++++   + Q A VR
Sbjct: 590 PGSSVWETLLGACRIHKDTNLARTVSEKLFELDPDNVGYHVLLSNIHSADRNYPQAATVR 649

Query: 574 LMMTQKGLNKDLGHSSIEINGNLETFHVGDRSHPRSKEIFEELDRLERRLKAAGYVAHME 633
               ++ L K  G++ IEI      F  GD+SHP+ KEI+E+L++LE +++ AGY    E
Sbjct: 650 QTAKKRKLAKAPGYTLIEIGETPHVFTSGDQSHPQVKEIYEKLEKLEGKMREAGYQPETE 709

Query: 634 SVLHDLNHEEIEETLCNHSERLAVAYGIISTAPGTTLRITKNLRACVNCHSAIKLISKLV 693
             LHD+  EE E  +  HSERLA+A+G+I+T PGT +RI KNLR C++CH+  KLISK+ 
Sbjct: 710 LALHDVEEEERELMVKVHSERLAIAFGLIATEPGTEIRIIKNLRVCLDCHTVTKLISKIT 769

Query: 694 DREIIIRDGKRFHHFKDGVCSCGDFW 718
           +R I++RD  RFHHFKDGVCSCGD+W
Sbjct: 770 ERVIVVRDANRFHHFKDGVCSCGDYW 792

[Close]
BLAST of CmaCh04G002740 vs. Swiss-Prot
Match: PP320_ARATH (Pentatricopeptide repeat-containing protein DOT4, chloroplastic OS=Arabidopsis thaliana GN=DOT4 PE=2 SV=1)

HSP 1 Score: 520.8 bits (1340), Expect = 2.4e-146
Identity = 263/657 (40.03%), Postives = 395/657 (60.12%), Query Frame = 1 

Query: 63  DQLYVQLIVSGLYKCGFLVIKFVNACLHLRDVNYAHKVFREVLEPDILLWNGIIKGYTQN 122
           +QL+  ++ SG  +   +    V   L  + V+ A KVF E+ E D++ WN II GY  N
Sbjct: 215 EQLHGFILKSGFGERNSVGNSLVAFYLKNQRVDSARKVFDEMTERDVISWNSIINGYVSN 274

Query: 123 NIFAGAIRMYKDMQVSGVNPDCFTFLYVLKACGGMSVEGIGKQMHSQTFKYGFGSNVFVQ 182
            +    + ++  M VSG+  D  T + V   C    +  +G+ +HS   K  F       
Sbjct: 275 GLAEKGLSVFVQMLVSGIEIDLATIVSVFAGCADSRLISLGRAVHSIGVKACFSREDRFC 334

Query: 183 NSLVSMYARYGQTSSARLVFDKLHNRTVVSWTSIISGYVQNGDPMDALRVFKDMRQSTVK 242
           N+L+ MY++ G   SA+ VF ++ +R+VVS+TS+I+GY + G   +A+++F++M +  + 
Sbjct: 335 NTLLDMYSKCGDLDSAKAVFREMSDRSVVSYTSMIAGYAREGLAGEAVKLFEEMEEEGIS 394

Query: 243 LDWIVLVSVMTAYTDMEDLGQGKAIHSLVTKLGLEFEPDIVVSLTNMYAKLGRVEIARFF 302
            D   + +V+        L +GK +H  + +  L F+  +  +L +MYAK G ++ A   
Sbjct: 395 PDVYTVTAVLNCCARYRLLDEGKRVHEWIKENDLGFDIFVSNALMDMYAKCGSMQEAELV 454

Query: 303 FNQMEKPNLLLWNAMISGYAKNGYGEEAIELFRKMIS-KNIGVDSVTVRSAILAVAQVGS 362
           F++M   +++ WN +I GY+KN Y  EA+ LF  ++  K    D  TV   + A A + +
Sbjct: 455 FSEMRVKDIISWNTIIGGYSKNCYANEALSLFNLLLEEKRFSPDERTVACVLPACASLSA 514

Query: 363 LELARWLDGYISKSEYRDDVFVNTALIDMHAKCGSICFARSVFDRMVDKDIVSWSAMIMG 422
            +  R + GYI ++ Y  D  V  +L+DM+AKCG++  A  +FD +  KD+VSW+ MI G
Sbjct: 515 FDKGREIHGYIMRNGYFSDRHVANSLVDMYAKCGALLLAHMLFDDIASKDLVSWTVMIAG 574

Query: 423 YGLHGHGQEAIDLYNRMKQSGIRPNDVTFVGLLTACKNSGLVKEGWELFHQMQDH-GIEP 482
           YG+HG G+EAI L+N+M+Q+GI  ++++FV LL AC +SGLV EGW  F+ M+    IEP
Sbjct: 575 YGMHGFGKEAIALFNQMRQAGIEADEISFVSLLYACSHSGLVDEGWRFFNIMRHECKIEP 634

Query: 483 HHQHYSCVVDLLGRAGYLNRAYDFIMSMPIKPGVSVWGALLSGCKIHRQVRLGEIAAEQL 542
             +HY+C+VD+L R G L +AY FI +MPI P  ++WGALL GC+IH  V+L E  AE++
Sbjct: 635 TVEHYACIVDMLARTGDLIKAYRFIENMPIPPDATIWGALLCGCRIHHDVKLAEKVAEKV 694

Query: 543 FLLDPYNTGHYVQLSNLYASAHLWNQVANVRLMMTQKGLNKDLGHSSIEINGNLETFHVG 602
           F L+P NTG+YV ++N+YA A  W QV  +R  + Q+GL K+ G S IEI G +  F  G
Sbjct: 695 FELEPENTGYYVLMANIYAEAEKWEQVKRLRKRIGQRGLRKNPGCSWIEIKGRVNIFVAG 754

Query: 603 DRSHPRSKEIFEELDRLERRLKAAGYVAHMESVLHDLNHEEIEETLCNHSERLAVAYGII 662
           D S+P ++ I   L ++  R+   GY    +  L D    E EE LC HSE+LA+A GII
Sbjct: 755 DSSNPETENIEAFLRKVRARMIEEGYSPLTKYALIDAEEMEKEEALCGHSEKLAMALGII 814

Query: 663 STAPGTTLRITKNLRACVNCHSAIKLISKLVDREIIIRDGKRFHHFKDGVCSCGDFW 718
           S+  G  +R+TKNLR C +CH   K +SKL  REI++RD  RFH FKDG CSC  FW
Sbjct: 815 SSGHGKIIRVTKNLRVCGDCHEMAKFMSKLTRREIVLRDSNRFHQFKDGHCSCRGFW 871

[Close]
BLAST of CmaCh04G002740 vs. TrEMBL
Match: A0A0A0KLB9_CUCSA (Uncharacterized protein OS=Cucumis sativus GN=Csa_5G175830 PE=4 SV=1)

HSP 1 Score: 1223.8 bits (3165), Expect = 0.0e+00
Identity = 593/691 (85.82%), Postives = 637/691 (92.19%), Query Frame = 1 

Query: 27  MSLHSFSLSLSLTSLSTALSKAAATSQEALLRRKHLDQLYVQLIVSGLYKCGFLVIKFVN 86
           MSLHSFSLSL L+SLS+ALSK+  T  EA LRRKHLDQ+YVQLIVSGL+KC FL+IKF+N
Sbjct: 1   MSLHSFSLSLLLSSLSSALSKSTITLHEASLRRKHLDQVYVQLIVSGLHKCRFLMIKFIN 60

Query: 87  ACLHLRDVNYAHKVFREVLEPDILLWNGIIKGYTQNNIFAGAIRMYKDMQVSGVNPDCFT 146
           ACLH  DVNYAHK FREV EPDILLWN IIKGYTQ NI    IRMY DMQ+S V+P+CFT
Sbjct: 61  ACLHFGDVNYAHKAFREVSEPDILLWNAIIKGYTQKNIVDAPIRMYMDMQISQVHPNCFT 120

Query: 147 FLYVLKACGGMSVEGIGKQMHSQTFKYGFGSNVFVQNSLVSMYARYGQTSSARLVFDKLH 206
           FLYVLKACGG SVEGIGKQ+H QTFKYGFGSNVFVQNSLVSMYA++GQ S AR+VFDKLH
Sbjct: 121 FLYVLKACGGTSVEGIGKQIHGQTFKYGFGSNVFVQNSLVSMYAKFGQISYARIVFDKLH 180

Query: 207 NRTVVSWTSIISGYVQNGDPMDALRVFKDMRQSTVKLDWIVLVSVMTAYTDMEDLGQGKA 266
           +RTVVSWTSIISGYVQNGDPM+AL VFK+MRQ  VK DWI LVSVMTAYT++EDLGQGK+
Sbjct: 181 DRTVVSWTSIISGYVQNGDPMEALNVFKEMRQCNVKPDWIALVSVMTAYTNVEDLGQGKS 240

Query: 267 IHSLVTKLGLEFEPDIVVSLTNMYAKLGRVEIARFFFNQMEKPNLLLWNAMISGYAKNGY 326
           IH LVTKLGLEFEPDIV+SLT MYAK G VE+ARFFFN+MEKPNL+LWNAMISGYA NGY
Sbjct: 241 IHGLVTKLGLEFEPDIVISLTTMYAKRGLVEVARFFFNRMEKPNLILWNAMISGYANNGY 300

Query: 327 GEEAIELFRKMISKNIGVDSVTVRSAILAVAQVGSLELARWLDGYISKSEYRDDVFVNTA 386
           GEEAI+LFR+MI+KNI VDS+T+RSA+LA AQVGSLELARWLDGYISKSEYRDD FVNT 
Sbjct: 301 GEEAIKLFREMITKNIRVDSITMRSAVLASAQVGSLELARWLDGYISKSEYRDDTFVNTG 360

Query: 387 LIDMHAKCGSICFARSVFDRMVDKDIVSWSAMIMGYGLHGHGQEAIDLYNRMKQSGIRPN 446
           LIDM+AKCGSI  AR VFDR+ DKD+V WS MIMGYGLHGHGQEAI LYN MKQ+G+ PN
Sbjct: 361 LIDMYAKCGSIYLARCVFDRVADKDVVLWSVMIMGYGLHGHGQEAICLYNEMKQAGVCPN 420

Query: 447 DVTFVGLLTACKNSGLVKEGWELFHQMQDHGIEPHHQHYSCVVDLLGRAGYLNRAYDFIM 506
           D TF+GLLTACKNSGLVKEGWELFH M DHGIEPHHQHYSCVVDLLGRAGYLN+AYDFIM
Sbjct: 421 DGTFIGLLTACKNSGLVKEGWELFHLMPDHGIEPHHQHYSCVVDLLGRAGYLNQAYDFIM 480

Query: 507 SMPIKPGVSVWGALLSGCKIHRQVRLGEIAAEQLFLLDPYNTGHYVQLSNLYASAHLWNQ 566
           SMPIKPGVSVWGALLS CKIHR+VRLGEIAAEQLF+LDPYNTGHYVQLSNLYASAHLW +
Sbjct: 481 SMPIKPGVSVWGALLSACKIHRKVRLGEIAAEQLFILDPYNTGHYVQLSNLYASAHLWTR 540

Query: 567 VANVRLMMTQKGLNKDLGHSSIEINGNLETFHVGDRSHPRSKEIFEELDRLERRLKAAGY 626
           VANVRLMMTQKGLNKDLGHSSIEINGNLETF VGDRSHP+SKEIFEELDRLE+RLKAAGY
Sbjct: 541 VANVRLMMTQKGLNKDLGHSSIEINGNLETFQVGDRSHPKSKEIFEELDRLEKRLKAAGY 600

Query: 627 VAHMESVLHDLNHEEIEETLCNHSERLAVAYGIISTAPGTTLRITKNLRACVNCHSAIKL 686
           V HMESVLHDLNHEEIEETLC+HSERLAVAYGIISTAPGTTLRITKNLRAC+NCHSAIKL
Sbjct: 601 VPHMESVLHDLNHEEIEETLCHHSERLAVAYGIISTAPGTTLRITKNLRACINCHSAIKL 660

Query: 687 ISKLVDREIIIRDGKRFHHFKDGVCSCGDFW 718
           ISKLVDREIIIRD KRFHHFKDGVCSCGDFW
Sbjct: 661 ISKLVDREIIIRDAKRFHHFKDGVCSCGDFW 691

[Close]
BLAST of CmaCh04G002740 vs. TrEMBL
Match: D7SQP8_VITVI (Putative uncharacterized protein OS=Vitis vinifera GN=VIT_12s0134g00210 PE=4 SV=1)

HSP 1 Score: 964.1 bits (2491), Expect = 9.2e-278
Identity = 454/661 (68.68%), Postives = 550/661 (83.21%), Query Frame = 1 

Query: 57  LRRKHLDQLYVQLIVSGLYKCGFLVIKFVNACLHLRDVNYAHKVFREVLEPDILLWNGII 116
           + ++HL+Q++ QL+VSGL + GFLV KFVNA  ++ ++ YA KVF E  EP + LWN II
Sbjct: 82  VHKRHLNQIHAQLVVSGLVESGFLVTKFVNASWNIGEIGYARKVFDEFPEPSVFLWNAII 141

Query: 117 KGYTQNNIFAGAIRMYKDMQVSGVNPDCFTFLYVLKACGGMSVEGIGKQMHSQTFKYGFG 176
           +GY+ +N F  AI MY  MQ SGVNPD FT   VLKAC G+ V  +GK++H Q F+ GF 
Sbjct: 142 RGYSSHNFFGDAIEMYSRMQASGVNPDGFTLPCVLKACSGVPVLEVGKRVHGQIFRLGFE 201

Query: 177 SNVFVQNSLVSMYARYGQTSSARLVFDKLHNRTVVSWTSIISGYVQNGDPMDALRVFKDM 236
           S+VFVQN LV++YA+ G+   AR+VF+ L +R +VSWTS+ISGY QNG PM+ALR+F  M
Sbjct: 202 SDVFVQNGLVALYAKCGRVEQARIVFEGLDDRNIVSWTSMISGYGQNGLPMEALRIFGQM 261

Query: 237 RQSTVKLDWIVLVSVMTAYTDMEDLGQGKAIHSLVTKLGLEFEPDIVVSLTNMYAKLGRV 296
           RQ  VK DWI LVSV+ AYTD+EDL QGK+IH  V K+GLEFEPD+++SLT MYAK G+V
Sbjct: 262 RQRNVKPDWIALVSVLRAYTDVEDLEQGKSIHGCVVKMGLEFEPDLLISLTAMYAKCGQV 321

Query: 297 EIARFFFNQMEKPNLLLWNAMISGYAKNGYGEEAIELFRKMISKNIGVDSVTVRSAILAV 356
            +AR FF+QME PN+++WNAMISGYAKNGY  EA+ LF++MISKNI  DS+TVRSAILA 
Sbjct: 322 MVARSFFDQMEIPNVMMWNAMISGYAKNGYTNEAVGLFQEMISKNIRTDSITVRSAILAC 381

Query: 357 AQVGSLELARWLDGYISKSEYRDDVFVNTALIDMHAKCGSICFARSVFDRMVDKDIVSWS 416
           AQVGSL+LA+W+  YI+K+EYR+DVFVNTALIDM AKCGS+  AR VFDR +DKD+V WS
Sbjct: 382 AQVGSLDLAKWMGDYINKTEYRNDVFVNTALIDMFAKCGSVDLAREVFDRTLDKDVVVWS 441

Query: 417 AMIMGYGLHGHGQEAIDLYNRMKQSGIRPNDVTFVGLLTACKNSGLVKEGWELFHQMQDH 476
           AMI+GYGLHG GQ+AIDL+  MKQ+G+ PNDVTFVGLLTAC +SGLV+EGWELFH M+ +
Sbjct: 442 AMIVGYGLHGRGQDAIDLFYAMKQAGVCPNDVTFVGLLTACNHSGLVEEGWELFHSMKYY 501

Query: 477 GIEPHHQHYSCVVDLLGRAGYLNRAYDFIMSMPIKPGVSVWGALLSGCKIHRQVRLGEIA 536
           GIE  HQHY+CVVDLLGR+G+LN AYDFI +MPI+PGVSVWGALL  CKI+R V LGE A
Sbjct: 502 GIEARHQHYACVVDLLGRSGHLNEAYDFITTMPIEPGVSVWGALLGACKIYRHVTLGEYA 561

Query: 537 AEQLFLLDPYNTGHYVQLSNLYASAHLWNQVANVRLMMTQKGLNKDLGHSSIEINGNLET 596
           AEQLF LDP+NTGHYVQLSNLYAS+ LW+ VA VR++M +KGL+KDLG+S IEING L+ 
Sbjct: 562 AEQLFSLDPFNTGHYVQLSNLYASSRLWDSVAKVRILMREKGLSKDLGYSLIEINGKLQA 621

Query: 597 FHVGDRSHPRSKEIFEELDRLERRLKAAGYVAHMESVLHDLNHEEIEETLCNHSERLAVA 656
           F VGD+SHPR KEIFEEL+ LERRLK AG++ H+ESVLHDLN EE EETLCNHSERLA+A
Sbjct: 622 FRVGDKSHPRFKEIFEELESLERRLKEAGFIPHIESVLHDLNQEEKEETLCNHSERLAIA 681

Query: 657 YGIISTAPGTTLRITKNLRACVNCHSAIKLISKLVDREIIIRDGKRFHHFKDGVCSCGDF 716
           YG+ISTAPGTTLRITKNLRAC+NCHSA KLISKLV+REI++RD  RFHHFK+GVCSC D+
Sbjct: 682 YGLISTAPGTTLRITKNLRACINCHSATKLISKLVNREIVVRDANRFHHFKNGVCSCRDY 741

Query: 717 W 718
           W
Sbjct: 742 W 742

[Close]
BLAST of CmaCh04G002740 vs. TrEMBL
Match: A0A061EHU3_THECC (Mitochondrial editing factor 22 OS=Theobroma cacao GN=TCM_019437 PE=4 SV=1)

HSP 1 Score: 937.6 bits (2422), Expect = 9.2e-270
Identity = 431/660 (65.30%), Postives = 547/660 (82.88%), Query Frame = 1 

Query: 58  RRKHLDQLYVQLIVSGLYKCGFLVIKFVNACLHLRDVNYAHKVFREVLEPDILLWNGIIK 117
           R  HL Q++ +L++  +++ GFL+ K +N+ ++L +++YA KVF E  +PD+ LWN I++
Sbjct: 76  RNAHLTQIHAKLVLLDIHQNGFLITKLINSAVNLGEISYARKVFDEFPDPDVFLWNAIVR 135

Query: 118 GYTQNNIFAGAIRMYKDMQVSGVNPDCFTFLYVLKACGGMSVEGIGKQMHSQTFKYGFGS 177
           GY++ N+FA AI MY  MQV  V+PD +T  +VLKACGG+    +G+++H Q F+ GF  
Sbjct: 136 GYSKCNMFANAIEMYSRMQVLWVSPDGYTLPHVLKACGGLPGFEMGRRVHGQIFRLGFEK 195

Query: 178 NVFVQNSLVSMYARYGQTSSARLVFDKLHNRTVVSWTSIISGYVQNGDPMDALRVFKDMR 237
           +VFVQN +V+ YA+ G+  SA++VFD L  R VVSWTS+ISGY QNG P++ALRVF +MR
Sbjct: 196 DVFVQNGIVAFYAKCGKIESAKVVFDGLELRNVVSWTSMISGYAQNGQPIEALRVFDEMR 255

Query: 238 QSTVKLDWIVLVSVMTAYTDMEDLGQGKAIHSLVTKLGLEFEPDIVVSLTNMYAKLGRVE 297
           +  V  DW+  VS + A+TD+EDL  GK+IH  V K+GLE EPD++++LT MYAK G+V 
Sbjct: 256 KMGVMPDWVAFVSAIRAHTDVEDLEHGKSIHGCVIKMGLELEPDLLIALTAMYAKCGQVM 315

Query: 298 IARFFFNQMEKPNLLLWNAMISGYAKNGYGEEAIELFRKMISKNIGVDSVTVRSAILAVA 357
           +AR FF+QM+ PNL+LWNAMISGYAKNGY EEA+ELFRKMIS NI  DS+T R A++A A
Sbjct: 316 VARSFFDQMKVPNLILWNAMISGYAKNGYAEEAVELFRKMISNNIRTDSITARCAVVACA 375

Query: 358 QVGSLELARWLDGYISKSEYRDDVFVNTALIDMHAKCGSICFARSVFDRMVDKDIVSWSA 417
           QVGSL LARW+D YISKSE+RDD+FVN+ALIDM AKCG++  AR VFDR ++KD+V WSA
Sbjct: 376 QVGSLGLARWMDNYISKSEHRDDIFVNSALIDMFAKCGNVDMARMVFDRTLEKDVVVWSA 435

Query: 418 MIMGYGLHGHGQEAIDLYNRMKQSGIRPNDVTFVGLLTACKNSGLVKEGWELFHQMQDHG 477
           MI+GYGLHG G+EA+DLY  MKQ+G+ PNDVTF+GLLTAC +SGLV++GW LFH M+D+G
Sbjct: 436 MIVGYGLHGRGREALDLYQLMKQAGVCPNDVTFLGLLTACNHSGLVEDGWRLFHCMKDYG 495

Query: 478 IEPHHQHYSCVVDLLGRAGYLNRAYDFIMSMPIKPGVSVWGALLSGCKIHRQVRLGEIAA 537
           IEP HQHY+CVVDLLGR GYL++AYDFIM+MPI+PGVSVWGALLS CKI+R V LGE AA
Sbjct: 496 IEPRHQHYACVVDLLGRGGYLDQAYDFIMNMPIEPGVSVWGALLSACKIYRHVTLGEYAA 555

Query: 538 EQLFLLDPYNTGHYVQLSNLYASAHLWNQVANVRLMMTQKGLNKDLGHSSIEINGNLETF 597
           EQLF ++ YNTGHYVQLSNLYAS  +W++VA VR+MM +KGL+KDLG+S IEING L+ F
Sbjct: 556 EQLFSIESYNTGHYVQLSNLYASVRMWDRVAKVRVMMKEKGLSKDLGYSLIEINGKLQAF 615

Query: 598 HVGDRSHPRSKEIFEELDRLERRLKAAGYVAHMESVLHDLNHEEIEETLCNHSERLAVAY 657
            VGD+SHP+SKEI+EEL+ LERRLK AG++ H +S LHDLN+EE+EETLCNHSERLA+A+
Sbjct: 616 RVGDKSHPQSKEIYEELESLERRLKQAGFIPHTDSSLHDLNYEEMEETLCNHSERLAIAF 675

Query: 658 GIISTAPGTTLRITKNLRACVNCHSAIKLISKLVDREIIIRDGKRFHHFKDGVCSCGDFW 717
           G+ISTAPGTTLRITKNLRAC+NCHSA KLISKLV+REI++RD  RFHHFKDGVCSCGD+W
Sbjct: 676 GLISTAPGTTLRITKNLRACINCHSATKLISKLVNREIVVRDANRFHHFKDGVCSCGDYW 735

[Close]
BLAST of CmaCh04G002740 vs. TrEMBL
Match: A0A0D2TXW8_GOSRA (Uncharacterized protein OS=Gossypium raimondii GN=B456_008G055100 PE=4 SV=1)

HSP 1 Score: 929.9 bits (2402), Expect = 1.9e-267
Identity = 434/657 (66.06%), Postives = 546/657 (83.11%), Query Frame = 1 

Query: 61  HLDQLYVQLIVSGLYKCGFLVIKFVNACLHLRDVNYAHKVFREVLEPDILLWNGIIKGYT 120
           ++ Q++ +L++ G+ + GFLV K VNA ++L +++YA KVF +  +PD+ LWN II+GY+
Sbjct: 76  NITQVHAKLLLLGIQQNGFLVSKLVNAAVNLGEISYARKVFDKFPDPDVFLWNAIIRGYS 135

Query: 121 QNNIFAGAIRMYKDMQVSGVNPDCFTFLYVLKACGGMSVEGIGKQMHSQTFKYGFGSNVF 180
           + N+FA A+ MY  MQV  V+PD +T  +VLKACGG+    +G+Q+H Q F+ GF  +VF
Sbjct: 136 KYNLFASAVEMYSRMQVLWVSPDGYTLPHVLKACGGIPSFRMGQQVHGQIFRLGFEKDVF 195

Query: 181 VQNSLVSMYARYGQTSSARLVFDKLHNRTVVSWTSIISGYVQNGDPMDALRVFKDMRQST 240
           VQN +V+ YA+ G+ +SA++VFD+L  R VVSWTS+ISGY QNG P++ALR F +MR + 
Sbjct: 196 VQNGVVAFYAKCGKIASAKVVFDRLEIRNVVSWTSMISGYAQNGQPIEALRFFDEMRSTG 255

Query: 241 VKLDWIVLVSVMTAYTDMEDLGQGKAIHSLVTKLGLEFEPDIVVSLTNMYAKLGRVEIAR 300
           V  DWI LVSV+ A+TD+EDL  GK+IHS V K+GLE EPD++++LT MYAK G+V +AR
Sbjct: 256 VMPDWIALVSVIRAHTDVEDLEHGKSIHSCVIKMGLELEPDLLIALTAMYAKCGQVMVAR 315

Query: 301 FFFNQMEKPNLLLWNAMISGYAKNGYGEEAIELFRKMISKNIGVDSVTVRSAILAVAQVG 360
            FFN ++ PNL+LWNAMISGYAKNGY EEA++LFR MIS NI  DS+T RSA+LA AQVG
Sbjct: 316 SFFNLVKVPNLILWNAMISGYAKNGYAEEAVKLFRDMISHNIKTDSITARSAVLACAQVG 375

Query: 361 SLELARWLDGYISKSEYRDDVFVNTALIDMHAKCGSICFARSVFDRMVDKDIVSWSAMIM 420
           S +LARW+D YISKSE++DDVFVN+ALIDM AKCG++  +R VF+R +DKD+V WS+MI+
Sbjct: 376 SFDLARWMDNYISKSEHKDDVFVNSALIDMFAKCGNVDMSRMVFNRTLDKDVVVWSSMIV 435

Query: 421 GYGLHGHGQEAIDLYNRMKQSGIRPNDVTFVGLLTACKNSGLVKEGWELFHQMQDHGIEP 480
           GYGLHG G+EA+DLY  MKQSG+ PN VTF+GLLTAC +SGLV++GW+LFH M+D+GIEP
Sbjct: 436 GYGLHGRGREALDLYQLMKQSGVSPNAVTFLGLLTACNHSGLVEDGWQLFHCMKDYGIEP 495

Query: 481 HHQHYSCVVDLLGRAGYLNRAYDFIMSMPIKPGVSVWGALLSGCKIHRQVRLGEIAAEQL 540
            HQHYSC+VDLLGR+GYL++AYDFIM+MPI+PGVSVWGALLS CKIHR V LGE AAE L
Sbjct: 496 RHQHYSCLVDLLGRSGYLDQAYDFIMNMPIEPGVSVWGALLSACKIHRHVTLGEYAAEWL 555

Query: 541 FLLDPYNTGHYVQLSNLYASAHLWNQVANVRLMMTQKGLNKDLGHSSIEINGNLETFHVG 600
           F L+ YNTGHYVQLSNLYASA +W++VA +R++M +KGL+KDLG+S IEING LE F VG
Sbjct: 556 FSLESYNTGHYVQLSNLYASARMWDRVAKIRVLMREKGLSKDLGYSLIEINGKLEAFRVG 615

Query: 601 DRSHPRSKEIFEELDRLERRLKAAGYVAHMESVLHDLNHEEIEETLCNHSERLAVAYGII 660
           D+SHPRSKEIFEEL+ LERRLK AG+V    S LHDLN EE+EETLCNHSERLA+A+G+I
Sbjct: 616 DKSHPRSKEIFEELESLERRLKQAGFVPDRNSSLHDLNEEEMEETLCNHSERLAIAFGLI 675

Query: 661 STAPGTTLRITKNLRACVNCHSAIKLISKLVDREIIIRDGKRFHHFKDGVCSCGDFW 718
           STA GTTLRITKNLRAC+NCHSA KLISKLV+REII+RD  RFHHFKDGVCSCGD+W
Sbjct: 676 STAQGTTLRITKNLRACINCHSATKLISKLVNREIIVRDANRFHHFKDGVCSCGDYW 732

[Close]
BLAST of CmaCh04G002740 vs. TrEMBL
Match: W9S3H1_9ROSA (Uncharacterized protein OS=Morus notabilis GN=L484_007616 PE=4 SV=1)

HSP 1 Score: 927.5 bits (2396), Expect = 9.5e-267
Identity = 431/659 (65.40%), Postives = 541/659 (82.09%), Query Frame = 1 

Query: 59  RKHLDQLYVQLIVSGLYKCGFLVIKFVNACLHLRDVNYAHKVFREVLEPDILLWNGIIKG 118
           +KHLDQ++ QL++SGL + GFL+ K VN    +    YA K+F E  +PD+ LWN I++G
Sbjct: 76  KKHLDQIHAQLLISGLQQNGFLITKLVNVSSDIGCNFYARKLFDEFTDPDVFLWNAIVRG 135

Query: 119 YTQNNIFAGAIRMYKDMQVSGVNPDCFTFLYVLKACGGMSVEGIGKQMHSQTFKYGFGSN 178
           Y+++N+F  A+ MY  MQ  GV+PD FTF +VLKAC G+     G+++H QTF+Y    +
Sbjct: 136 YSKHNMFGDALEMYSRMQAMGVSPDAFTFPHVLKACSGLQALEFGRRVHGQTFRYRSACD 195

Query: 179 VFVQNSLVSMYARYGQTSSARLVFDKLHNRTVVSWTSIISGYVQNGDPMDALRVFKDMRQ 238
            FVQNSLV+ YA+  Q   AR+VF++L +R++VSWTSIISGY QNG+PM+ALR+F  MR+
Sbjct: 196 AFVQNSLVAFYAKCCQIGRARMVFERLCDRSIVSWTSIISGYAQNGEPMEALRIFSQMRR 255

Query: 239 STVKLDWIVLVSVMTAYTDMEDLGQGKAIHSLVTKLGLEFEPDIVVSLTNMYAKLGRVEI 298
           S VK+DWI LVSV+ AYTD+EDL QGKAIH  + KLGLE E D+++SLT MYAK G+V +
Sbjct: 256 SNVKIDWIALVSVLRAYTDVEDLEQGKAIHGCLIKLGLESETDLLISLTAMYAKGGQVTV 315

Query: 299 ARFFFNQMEKPNLLLWNAMISGYAKNGYGEEAIELFRKMISKNIGVDSVTVRSAILAVAQ 358
           AR FF+QME+P L+L NAMISGYAKNG+ +EA+ELFRKMI+KNI  DS+T+RSAIL VAQ
Sbjct: 316 ARSFFDQMEEPGLILCNAMISGYAKNGHADEAVELFRKMIAKNIRTDSITLRSAILGVAQ 375

Query: 359 VGSLELARWLDGYISKSEYRDDVFVNTALIDMHAKCGSICFARSVFDRMVDKDIVSWSAM 418
           VGSLELA+W+D Y+S++EY+ D+FVNTALIDM+AKCG I FAR VFDR  DKD+  WSAM
Sbjct: 376 VGSLELAKWIDDYVSRTEYKTDIFVNTALIDMYAKCGDIDFAREVFDRTPDKDVFVWSAM 435

Query: 419 IMGYGLHGHGQEAIDLYNRMKQSGIRPNDVTFVGLLTACKNSGLVKEGWELFHQMQDHGI 478
           I+GYGLHG G+EAID Y  M+Q+G+ PNDVTF+ +LTAC +SGLV+EGW+LFH M+D+ I
Sbjct: 436 IVGYGLHGRGREAIDTYYAMEQAGVLPNDVTFLAVLTACNHSGLVEEGWKLFHCMKDYAI 495

Query: 479 EPHHQHYSCVVDLLGRAGYLNRAYDFIMSMPIKPGVSVWGALLSGCKIHRQVRLGEIAAE 538
           EP +QHYSCVVDLLGRAGY+ +AY FIM MPI+PG SVWGA+L+ C IHR V++GE AAE
Sbjct: 496 EPQNQHYSCVVDLLGRAGYVEKAYHFIMKMPIEPGASVWGAILNACMIHRHVKIGEYAAE 555

Query: 539 QLFLLDPYNTGHYVQLSNLYASAHLWNQVANVRLMMTQKGLNKDLGHSSIEINGNLETFH 598
           +LF LD  NTG+YVQLSN+YASA +W+ VA  R +M +KGL+KDLG+S+IEING L+ F 
Sbjct: 556 KLFSLDRSNTGYYVQLSNIYASARMWDCVAKTRAVMKRKGLSKDLGYSAIEINGKLQGFR 615

Query: 599 VGDRSHPRSKEIFEELDRLERRLKAAGYVAHMESVLHDLNHEEIEETLCNHSERLAVAYG 658
           VGD+SHPRS++IFEEL+ LER LK AG+V H ESVLHDLN+EE EETLCNHSER+A+AYG
Sbjct: 616 VGDKSHPRSRKIFEELENLERGLKEAGFVPHTESVLHDLNYEEKEETLCNHSERIAIAYG 675

Query: 659 IISTAPGTTLRITKNLRACVNCHSAIKLISKLVDREIIIRDGKRFHHFKDGVCSCGDFW 718
           +ISTAPGTTLRITKNLRACVNCHSA KLIS+LV+REI++RD  RFHHFKDG CSCGD+W
Sbjct: 676 LISTAPGTTLRITKNLRACVNCHSATKLISRLVNREIVVRDANRFHHFKDGFCSCGDYW 734

[Close]
BLAST of CmaCh04G002740 vs. TAIR10
Match: AT3G12770.1 (AT3G12770.1 mitochondrial editing factor 22)

HSP 1 Score: 832.0 bits (2148), Expect = 2.7e-241
Identity = 384/666 (57.66%), Postives = 517/666 (77.63%), Query Frame = 1 

Query: 54  EALLRRKHLDQLYVQLIVSGLYKCGFLVIKFVNACLHLRDVNYAHKVFREVLEPDILLWN 113
           ++   +  L Q++ +L+V GL   GFL+ K ++A     D+ +A +VF ++  P I  WN
Sbjct: 29  DSATHKAQLKQIHARLLVLGLQFSGFLITKLIHASSSFGDITFARQVFDDLPRPQIFPWN 88

Query: 114 GIIKGYTQNNIFAGAIRMYKDMQVSGVNPDCFTFLYVLKACGGMSVEGIGKQMHSQTFKY 173
            II+GY++NN F  A+ MY +MQ++ V+PD FTF ++LKAC G+S   +G+ +H+Q F+ 
Sbjct: 89  AIIRGYSRNNHFQDALLMYSNMQLARVSPDSFTFPHLLKACSGLSHLQMGRFVHAQVFRL 148

Query: 174 GFGSNVFVQNSLVSMYARYGQTSSARLVFD--KLHNRTVVSWTSIISGYVQNGDPMDALR 233
           GF ++VFVQN L+++YA+  +  SAR VF+   L  RT+VSWT+I+S Y QNG+PM+AL 
Sbjct: 149 GFDADVFVQNGLIALYAKCRRLGSARTVFEGLPLPERTIVSWTAIVSAYAQNGEPMEALE 208

Query: 234 VFKDMRQSTVKLDWIVLVSVMTAYTDMEDLGQGKAIHSLVTKLGLEFEPDIVVSLTNMYA 293
           +F  MR+  VK DW+ LVSV+ A+T ++DL QG++IH+ V K+GLE EPD+++SL  MYA
Sbjct: 209 IFSQMRKMDVKPDWVALVSVLNAFTCLQDLKQGRSIHASVVKMGLEIEPDLLISLNTMYA 268

Query: 294 KLGRVEIARFFFNQMEKPNLLLWNAMISGYAKNGYGEEAIELFRKMISKNIGVDSVTVRS 353
           K G+V  A+  F++M+ PNL+LWNAMISGYAKNGY  EAI++F +MI+K++  D++++ S
Sbjct: 269 KCGQVATAKILFDKMKSPNLILWNAMISGYAKNGYAREAIDMFHEMINKDVRPDTISITS 328

Query: 354 AILAVAQVGSLELARWLDGYISKSEYRDDVFVNTALIDMHAKCGSICFARSVFDRMVDKD 413
           AI A AQVGSLE AR +  Y+ +S+YRDDVF+++ALIDM AKCGS+  AR VFDR +D+D
Sbjct: 329 AISACAQVGSLEQARSMYEYVGRSDYRDDVFISSALIDMFAKCGSVEGARLVFDRTLDRD 388

Query: 414 IVSWSAMIMGYGLHGHGQEAIDLYNRMKQSGIRPNDVTFVGLLTACKNSGLVKEGWELFH 473
           +V WSAMI+GYGLHG  +EAI LY  M++ G+ PNDVTF+GLL AC +SG+V+EGW  F+
Sbjct: 389 VVVWSAMIVGYGLHGRAREAISLYRAMERGGVHPNDVTFLGLLMACNHSGMVREGWWFFN 448

Query: 474 QMQDHGIEPHHQHYSCVVDLLGRAGYLNRAYDFIMSMPIKPGVSVWGALLSGCKIHRQVR 533
           +M DH I P  QHY+CV+DLLGRAG+L++AY+ I  MP++PGV+VWGALLS CK HR V 
Sbjct: 449 RMADHKINPQQQHYACVIDLLGRAGHLDQAYEVIKCMPVQPGVTVWGALLSACKKHRHVE 508

Query: 534 LGEIAAEQLFLLDPYNTGHYVQLSNLYASAHLWNQVANVRLMMTQKGLNKDLGHSSIEIN 593
           LGE AA+QLF +DP NTGHYVQLSNLYA+A LW++VA VR+ M +KGLNKD+G S +E+ 
Sbjct: 509 LGEYAAQQLFSIDPSNTGHYVQLSNLYAAARLWDRVAEVRVRMKEKGLNKDVGCSWVEVR 568

Query: 594 GNLETFHVGDRSHPRSKEIFEELDRLERRLKAAGYVAHMESVLHDLNHEEIEETLCNHSE 653
           G LE F VGD+SHPR +EI  +++ +E RLK  G+VA+ ++ LHDLN EE EETLC+HSE
Sbjct: 569 GRLEAFRVGDKSHPRYEEIERQVEWIESRLKEGGFVANKDASLHDLNDEEAEETLCSHSE 628

Query: 654 RLAVAYGIISTAPGTTLRITKNLRACVNCHSAIKLISKLVDREIIIRDGKRFHHFKDGVC 713
           R+A+AYG+IST  GT LRITKNLRACVNCH+A KLISKLVDREI++RD  RFHHFKDGVC
Sbjct: 629 RIAIAYGLISTPQGTPLRITKNLRACVNCHAATKLISKLVDREIVVRDTNRFHHFKDGVC 688

Query: 714 SCGDFW 718
           SCGD+W
Sbjct: 689 SCGDYW 694

[Close]
BLAST of CmaCh04G002740 vs. TAIR10
Match: AT1G11290.1 (AT1G11290.1 Pentatricopeptide repeat (PPR) superfamily protein)

HSP 1 Score: 547.4 bits (1409), Expect = 1.4e-155
Identity = 269/655 (41.07%), Postives = 411/655 (62.75%), Query Frame = 1 

Query: 64  QLYVQLIVSGLYKCGFLVIKFVNACLHLRDVNYAHKVFREVLEPDILLWNGIIKGYTQNN 123
           +++  L+ SG     F +    N     R VN A KVF  + E D++ WN I+ GY+QN 
Sbjct: 156 EIHGLLVKSGFSLDLFAMTGLENMYAKCRQVNEARKVFDRMPERDLVSWNTIVAGYSQNG 215

Query: 124 IFAGAIRMYKDMQVSGVNPDCFTFLYVLKACGGMSVEGIGKQMHSQTFKYGFGSNVFVQN 183
           +   A+ M K M    + P   T + VL A   + +  +GK++H    + GF S V +  
Sbjct: 216 MARMALEMVKSMCEENLKPSFITIVSVLPAVSALRLISVGKEIHGYAMRSGFDSLVNIST 275

Query: 184 SLVSMYARYGQTSSARLVFDKLHNRTVVSWTSIISGYVQNGDPMDALRVFKDMRQSTVKL 243
           +LV MYA+ G   +AR +FD +  R VVSW S+I  YVQN +P +A+ +F+ M    VK 
Sbjct: 276 ALVDMYAKCGSLETARQLFDGMLERNVVSWNSMIDAYVQNENPKEAMLIFQKMLDEGVKP 335

Query: 244 DWIVLVSVMTAYTDMEDLGQGKAIHSLVTKLGLEFEPDIVVSLTNMYAKLGRVEIARFFF 303
             + ++  + A  D+ DL +G+ IH L  +LGL+    +V SL +MY K   V+ A   F
Sbjct: 336 TDVSVMGALHACADLGDLERGRFIHKLSVELGLDRNVSVVNSLISMYCKCKEVDTAASMF 395

Query: 304 NQMEKPNLLLWNAMISGYAKNGYGEEAIELFRKMISKNIGVDSVTVRSAILAVAQVGSLE 363
            +++   L+ WNAMI G+A+NG   +A+  F +M S+ +  D+ T  S I A+A++    
Sbjct: 396 GKLQSRTLVSWNAMILGFAQNGRPIDALNYFSQMRSRTVKPDTFTYVSVITAIAELSITH 455

Query: 364 LARWLDGYISKSEYRDDVFVNTALIDMHAKCGSICFARSVFDRMVDKDIVSWSAMIMGYG 423
            A+W+ G + +S    +VFV TAL+DM+AKCG+I  AR +FD M ++ + +W+AMI GYG
Sbjct: 456 HAKWIHGVVMRSCLDKNVFVTTALVDMYAKCGAIMIARLIFDMMSERHVTTWNAMIDGYG 515

Query: 424 LHGHGQEAIDLYNRMKQSGIRPNDVTFVGLLTACKNSGLVKEGWELFHQM-QDHGIEPHH 483
            HG G+ A++L+  M++  I+PN VTF+ +++AC +SGLV+ G + F+ M +++ IE   
Sbjct: 516 THGFGKAALELFEEMQKGTIKPNGVTFLSVISACSHSGLVEAGLKCFYMMKENYSIELSM 575

Query: 484 QHYSCVVDLLGRAGYLNRAYDFIMSMPIKPGVSVWGALLSGCKIHRQVRLGEIAAEQLFL 543
            HY  +VDLLGRAG LN A+DFIM MP+KP V+V+GA+L  C+IH+ V   E AAE+LF 
Sbjct: 576 DHYGAMVDLLGRAGRLNEAWDFIMQMPVKPAVNVYGAMLGACQIHKNVNFAEKAAERLFE 635

Query: 544 LDPYNTGHYVQLSNLYASAHLWNQVANVRLMMTQKGLNKDLGHSSIEINGNLETFHVGDR 603
           L+P + G++V L+N+Y +A +W +V  VR+ M ++GL K  G S +EI   + +F  G  
Sbjct: 636 LNPDDGGYHVLLANIYRAASMWEKVGQVRVSMLRQGLRKTPGCSMVEIKNEVHSFFSGST 695

Query: 604 SHPRSKEIFEELDRLERRLKAAGYVAHMESVLHDLNHEEIEETLCNHSERLAVAYGIIST 663
           +HP SK+I+  L++L   +K AGYV     VL  + ++  E+ L  HSE+LA+++G+++T
Sbjct: 696 AHPDSKKIYAFLEKLICHIKEAGYVPDTNLVL-GVENDVKEQLLSTHSEKLAISFGLLNT 755

Query: 664 APGTTLRITKNLRACVNCHSAIKLISKLVDREIIIRDGKRFHHFKDGVCSCGDFW 718
             GTT+ + KNLR C +CH+A K IS +  REI++RD +RFHHFK+G CSCGD+W
Sbjct: 756 TAGTTIHVRKNLRVCADCHNATKYISLVTGREIVVRDMQRFHHFKNGACSCGDYW 809

[Close]
BLAST of CmaCh04G002740 vs. TAIR10
Match: AT3G26782.1 (AT3G26782.1 Tetratricopeptide repeat (TPR)-like superfamily protein)

HSP 1 Score: 547.0 bits (1408), Expect = 1.8e-155
Identity = 267/626 (42.65%), Postives = 406/626 (64.86%), Query Frame = 1 

Query: 102 REVLEPDILLWNGIIKGYTQNNIFAGAIRMYKDMQVSGVNPDCFTFLYVLKACGGMSVEG 161
           R V + D+  WN +I    ++   A A+  +  M+   + P   +F   +KAC  +    
Sbjct: 34  RYVDKTDVFSWNSVIADLARSGDSAEALLAFSSMRKLSLYPTRSSFPCAIKACSSLFDIF 93

Query: 162 IGKQMHSQTFKYGFGSNVFVQNSLVSMYARYGQTSSARLVFDKLHNRTVVSWTSIISGYV 221
            GKQ H Q F +G+ S++FV ++L+ MY+  G+   AR VFD++  R +VSWTS+I GY 
Sbjct: 94  SGKQTHQQAFVFGYQSDIFVSSALIVMYSTCGKLEDARKVFDEIPKRNIVSWTSMIRGYD 153

Query: 222 QNGDPMDALRVFKDMR------QSTVKLDWIVLVSVMTAYTDMEDLGQGKAIHSLVTKLG 281
            NG+ +DA+ +FKD+          + LD + LVSV++A + +   G  ++IHS V K G
Sbjct: 154 LNGNALDAVSLFKDLLVDENDDDDAMFLDSMGLVSVISACSRVPAKGLTESIHSFVIKRG 213

Query: 282 LEFEPDIVVSLTNMYAKLGR--VEIARFFFNQMEKPNLLLWNAMISGYAKNGYGEEAIEL 341
            +    +  +L + YAK G   V +AR  F+Q+   + + +N+++S YA++G   EA E+
Sbjct: 214 FDRGVSVGNTLLDAYAKGGEGGVAVARKIFDQIVDKDRVSYNSIMSVYAQSGMSNEAFEV 273

Query: 342 FRKMI-SKNIGVDSVTVRSAILAVAQVGSLELARWLDGYISKSEYRDDVFVNTALIDMHA 401
           FR+++ +K +  +++T+ + +LAV+  G+L + + +   + +    DDV V T++IDM+ 
Sbjct: 274 FRRLVKNKVVTFNAITLSTVLLAVSHSGALRIGKCIHDQVIRMGLEDDVIVGTSIIDMYC 333

Query: 402 KCGSICFARSVFDRMVDKDIVSWSAMIMGYGLHGHGQEAIDLYNRMKQSGIRPNDVTFVG 461
           KCG +  AR  FDRM +K++ SW+AMI GYG+HGH  +A++L+  M  SG+RPN +TFV 
Sbjct: 334 KCGRVETARKAFDRMKNKNVRSWTAMIAGYGMHGHAAKALELFPAMIDSGVRPNYITFVS 393

Query: 462 LLTACKNSGLVKEGWELFHQMQDH-GIEPHHQHYSCVVDLLGRAGYLNRAYDFIMSMPIK 521
           +L AC ++GL  EGW  F+ M+   G+EP  +HY C+VDLLGRAG+L +AYD I  M +K
Sbjct: 394 VLAACSHAGLHVEGWRWFNAMKGRFGVEPGLEHYGCMVDLLGRAGFLQKAYDLIQRMKMK 453

Query: 522 PGVSVWGALLSGCKIHRQVRLGEIAAEQLFLLDPYNTGHYVQLSNLYASAHLWNQVANVR 581
           P   +W +LL+ C+IH+ V L EI+  +LF LD  N G+Y+ LS++YA A  W  V  VR
Sbjct: 454 PDSIIWSSLLAACRIHKNVELAEISVARLFELDSSNCGYYMLLSHIYADAGRWKDVERVR 513

Query: 582 LMMTQKGLNKDLGHSSIEINGNLETFHVGDRSHPRSKEIFEELDRLERRLKAAGYVAHME 641
           ++M  +GL K  G S +E+NG +  F +GD  HP+ ++I+E L  L R+L  AGYV++  
Sbjct: 514 MIMKNRGLVKPPGFSLLELNGEVHVFLIGDEEHPQREKIYEFLAELNRKLLEAGYVSNTS 573

Query: 642 SVLHDLNHEEIEETLCNHSERLAVAYGIISTAPGTTLRITKNLRACVNCHSAIKLISKLV 701
           SV HD++ EE E TL  HSE+LA+A+GI++T PG+T+ + KNLR C +CH+ IKLISK+V
Sbjct: 574 SVCHDVDEEEKEMTLRVHSEKLAIAFGIMNTVPGSTVNVVKNLRVCSDCHNVIKLISKIV 633

Query: 702 DREIIIRDGKRFHHFKDGVCSCGDFW 718
           DRE ++RD KRFHHFKDG CSCGD+W
Sbjct: 634 DREFVVRDAKRFHHFKDGGCSCGDYW 659

[Close]
BLAST of CmaCh04G002740 vs. TAIR10
Match: AT4G30700.1 (AT4G30700.1 Pentatricopeptide repeat (PPR) superfamily protein)

HSP 1 Score: 521.9 bits (1343), Expect = 6.1e-148
Identity = 262/626 (41.85%), Postives = 390/626 (62.30%), Query Frame = 1 

Query: 94  VNYAHKVFREVLEPDILLWNGIIKGYTQNNIFAGAIRMYKDM-QVSGVNPDCFTFLYVLK 153
           V  A KVF  + E D +LWN +I GY +N ++  +I++++D+   S    D  T L +L 
Sbjct: 170 VEDARKVFDRMPEKDTILWNTMISGYRKNEMYVESIQVFRDLINESCTRLDTTTLLDILP 229

Query: 154 ACGGMSVEGIGKQMHSQTFKYGFGSNVFVQNSLVSMYARYGQTSSARLVFDKLHNRTVVS 213
           A   +    +G Q+HS   K G  S+ +V    +S+Y++ G+      +F +     +V+
Sbjct: 230 AVAELQELRLGMQIHSLATKTGCYSHDYVLTGFISLYSKCGKIKMGSALFREFRKPDIVA 289

Query: 214 WTSIISGYVQNGDPMDALRVFKDMRQSTVKLDWIVLVSVMTAYTDMEDLGQGKAIHSLVT 273
           + ++I GY  NG+   +L +FK++  S  +L    LVS++     +  +    AIH    
Sbjct: 290 YNAMIHGYTSNGETELSLSLFKELMLSGARLRSSTLVSLVPVSGHLMLI---YAIHGYCL 349

Query: 274 KLGLEFEPDIVVSLTNMYAKLGRVEIARFFFNQMEKPNLLLWNAMISGYAKNGYGEEAIE 333
           K        +  +LT +Y+KL  +E AR  F++  + +L  WNAMISGY +NG  E+AI 
Sbjct: 350 KSNFLSHASVSTALTTVYSKLNEIESARKLFDESPEKSLPSWNAMISGYTQNGLTEDAIS 409

Query: 334 LFRKMISKNIGVDSVTVRSAILAVAQVGSLELARWLDGYISKSEYRDDVFVNTALIDMHA 393
           LFR+M       + VT+   + A AQ+G+L L +W+   +  +++   ++V+TALI M+A
Sbjct: 410 LFREMQKSEFSPNPVTITCILSACAQLGALSLGKWVHDLVRSTDFESSIYVSTALIGMYA 469

Query: 394 KCGSICFARSVFDRMVDKDIVSWSAMIMGYGLHGHGQEAIDLYNRMKQSGIRPNDVTFVG 453
           KCGSI  AR +FD M  K+ V+W+ MI GYGLHG GQEA++++  M  SGI P  VTF+ 
Sbjct: 470 KCGSIAEARRLFDLMTKKNEVTWNTMISGYGLHGQGQEALNIFYEMLNSGITPTPVTFLC 529

Query: 454 LLTACKNSGLVKEGWELFHQM-QDHGIEPHHQHYSCVVDLLGRAGYLNRAYDFIMSMPIK 513
           +L AC ++GLVKEG E+F+ M   +G EP  +HY+C+VD+LGRAG+L RA  FI +M I+
Sbjct: 530 VLYACSHAGLVKEGDEIFNSMIHRYGFEPSVKHYACMVDILGRAGHLQRALQFIEAMSIE 589

Query: 514 PGVSVWGALLSGCKIHRQVRLGEIAAEQLFLLDPYNTGHYVQLSNLYASAHLWNQVANVR 573
           PG SVW  LL  C+IH+   L    +E+LF LDP N G++V LSN++++   + Q A VR
Sbjct: 590 PGSSVWETLLGACRIHKDTNLARTVSEKLFELDPDNVGYHVLLSNIHSADRNYPQAATVR 649

Query: 574 LMMTQKGLNKDLGHSSIEINGNLETFHVGDRSHPRSKEIFEELDRLERRLKAAGYVAHME 633
               ++ L K  G++ IEI      F  GD+SHP+ KEI+E+L++LE +++ AGY    E
Sbjct: 650 QTAKKRKLAKAPGYTLIEIGETPHVFTSGDQSHPQVKEIYEKLEKLEGKMREAGYQPETE 709

Query: 634 SVLHDLNHEEIEETLCNHSERLAVAYGIISTAPGTTLRITKNLRACVNCHSAIKLISKLV 693
             LHD+  EE E  +  HSERLA+A+G+I+T PGT +RI KNLR C++CH+  KLISK+ 
Sbjct: 710 LALHDVEEEERELMVKVHSERLAIAFGLIATEPGTEIRIIKNLRVCLDCHTVTKLISKIT 769

Query: 694 DREIIIRDGKRFHHFKDGVCSCGDFW 718
           +R I++RD  RFHHFKDGVCSCGD+W
Sbjct: 770 ERVIVVRDANRFHHFKDGVCSCGDYW 792

[Close]
BLAST of CmaCh04G002740 vs. TAIR10
Match: AT4G18750.1 (AT4G18750.1 Pentatricopeptide repeat (PPR) superfamily protein)

HSP 1 Score: 520.8 bits (1340), Expect = 1.4e-147
Identity = 263/657 (40.03%), Postives = 395/657 (60.12%), Query Frame = 1 

Query: 63  DQLYVQLIVSGLYKCGFLVIKFVNACLHLRDVNYAHKVFREVLEPDILLWNGIIKGYTQN 122
           +QL+  ++ SG  +   +    V   L  + V+ A KVF E+ E D++ WN II GY  N
Sbjct: 215 EQLHGFILKSGFGERNSVGNSLVAFYLKNQRVDSARKVFDEMTERDVISWNSIINGYVSN 274

Query: 123 NIFAGAIRMYKDMQVSGVNPDCFTFLYVLKACGGMSVEGIGKQMHSQTFKYGFGSNVFVQ 182
            +    + ++  M VSG+  D  T + V   C    +  +G+ +HS   K  F       
Sbjct: 275 GLAEKGLSVFVQMLVSGIEIDLATIVSVFAGCADSRLISLGRAVHSIGVKACFSREDRFC 334

Query: 183 NSLVSMYARYGQTSSARLVFDKLHNRTVVSWTSIISGYVQNGDPMDALRVFKDMRQSTVK 242
           N+L+ MY++ G   SA+ VF ++ +R+VVS+TS+I+GY + G   +A+++F++M +  + 
Sbjct: 335 NTLLDMYSKCGDLDSAKAVFREMSDRSVVSYTSMIAGYAREGLAGEAVKLFEEMEEEGIS 394

Query: 243 LDWIVLVSVMTAYTDMEDLGQGKAIHSLVTKLGLEFEPDIVVSLTNMYAKLGRVEIARFF 302
            D   + +V+        L +GK +H  + +  L F+  +  +L +MYAK G ++ A   
Sbjct: 395 PDVYTVTAVLNCCARYRLLDEGKRVHEWIKENDLGFDIFVSNALMDMYAKCGSMQEAELV 454

Query: 303 FNQMEKPNLLLWNAMISGYAKNGYGEEAIELFRKMIS-KNIGVDSVTVRSAILAVAQVGS 362
           F++M   +++ WN +I GY+KN Y  EA+ LF  ++  K    D  TV   + A A + +
Sbjct: 455 FSEMRVKDIISWNTIIGGYSKNCYANEALSLFNLLLEEKRFSPDERTVACVLPACASLSA 514

Query: 363 LELARWLDGYISKSEYRDDVFVNTALIDMHAKCGSICFARSVFDRMVDKDIVSWSAMIMG 422
            +  R + GYI ++ Y  D  V  +L+DM+AKCG++  A  +FD +  KD+VSW+ MI G
Sbjct: 515 FDKGREIHGYIMRNGYFSDRHVANSLVDMYAKCGALLLAHMLFDDIASKDLVSWTVMIAG 574

Query: 423 YGLHGHGQEAIDLYNRMKQSGIRPNDVTFVGLLTACKNSGLVKEGWELFHQMQDH-GIEP 482
           YG+HG G+EAI L+N+M+Q+GI  ++++FV LL AC +SGLV EGW  F+ M+    IEP
Sbjct: 575 YGMHGFGKEAIALFNQMRQAGIEADEISFVSLLYACSHSGLVDEGWRFFNIMRHECKIEP 634

Query: 483 HHQHYSCVVDLLGRAGYLNRAYDFIMSMPIKPGVSVWGALLSGCKIHRQVRLGEIAAEQL 542
             +HY+C+VD+L R G L +AY FI +MPI P  ++WGALL GC+IH  V+L E  AE++
Sbjct: 635 TVEHYACIVDMLARTGDLIKAYRFIENMPIPPDATIWGALLCGCRIHHDVKLAEKVAEKV 694

Query: 543 FLLDPYNTGHYVQLSNLYASAHLWNQVANVRLMMTQKGLNKDLGHSSIEINGNLETFHVG 602
           F L+P NTG+YV ++N+YA A  W QV  +R  + Q+GL K+ G S IEI G +  F  G
Sbjct: 695 FELEPENTGYYVLMANIYAEAEKWEQVKRLRKRIGQRGLRKNPGCSWIEIKGRVNIFVAG 754

Query: 603 DRSHPRSKEIFEELDRLERRLKAAGYVAHMESVLHDLNHEEIEETLCNHSERLAVAYGII 662
           D S+P ++ I   L ++  R+   GY    +  L D    E EE LC HSE+LA+A GII
Sbjct: 755 DSSNPETENIEAFLRKVRARMIEEGYSPLTKYALIDAEEMEKEEALCGHSEKLAMALGII 814

Query: 663 STAPGTTLRITKNLRACVNCHSAIKLISKLVDREIIIRDGKRFHHFKDGVCSCGDFW 718
           S+  G  +R+TKNLR C +CH   K +SKL  REI++RD  RFH FKDG CSC  FW
Sbjct: 815 SSGHGKIIRVTKNLRVCGDCHEMAKFMSKLTRREIVLRDSNRFHQFKDGHCSCRGFW 871

[Close]
BLAST of CmaCh04G002740 vs. NCBI nr
Match: gi|778700750|ref|XP_011654911.1| (PREDICTED: pentatricopeptide repeat-containing protein At3g12770 [Cucumis sativus])

HSP 1 Score: 1223.8 bits (3165), Expect = 0.0e+00
Identity = 593/691 (85.82%), Postives = 637/691 (92.19%), Query Frame = 1 

Query: 27  MSLHSFSLSLSLTSLSTALSKAAATSQEALLRRKHLDQLYVQLIVSGLYKCGFLVIKFVN 86
           MSLHSFSLSL L+SLS+ALSK+  T  EA LRRKHLDQ+YVQLIVSGL+KC FL+IKF+N
Sbjct: 1   MSLHSFSLSLLLSSLSSALSKSTITLHEASLRRKHLDQVYVQLIVSGLHKCRFLMIKFIN 60

Query: 87  ACLHLRDVNYAHKVFREVLEPDILLWNGIIKGYTQNNIFAGAIRMYKDMQVSGVNPDCFT 146
           ACLH  DVNYAHK FREV EPDILLWN IIKGYTQ NI    IRMY DMQ+S V+P+CFT
Sbjct: 61  ACLHFGDVNYAHKAFREVSEPDILLWNAIIKGYTQKNIVDAPIRMYMDMQISQVHPNCFT 120

Query: 147 FLYVLKACGGMSVEGIGKQMHSQTFKYGFGSNVFVQNSLVSMYARYGQTSSARLVFDKLH 206
           FLYVLKACGG SVEGIGKQ+H QTFKYGFGSNVFVQNSLVSMYA++GQ S AR+VFDKLH
Sbjct: 121 FLYVLKACGGTSVEGIGKQIHGQTFKYGFGSNVFVQNSLVSMYAKFGQISYARIVFDKLH 180

Query: 207 NRTVVSWTSIISGYVQNGDPMDALRVFKDMRQSTVKLDWIVLVSVMTAYTDMEDLGQGKA 266
           +RTVVSWTSIISGYVQNGDPM+AL VFK+MRQ  VK DWI LVSVMTAYT++EDLGQGK+
Sbjct: 181 DRTVVSWTSIISGYVQNGDPMEALNVFKEMRQCNVKPDWIALVSVMTAYTNVEDLGQGKS 240

Query: 267 IHSLVTKLGLEFEPDIVVSLTNMYAKLGRVEIARFFFNQMEKPNLLLWNAMISGYAKNGY 326
           IH LVTKLGLEFEPDIV+SLT MYAK G VE+ARFFFN+MEKPNL+LWNAMISGYA NGY
Sbjct: 241 IHGLVTKLGLEFEPDIVISLTTMYAKRGLVEVARFFFNRMEKPNLILWNAMISGYANNGY 300

Query: 327 GEEAIELFRKMISKNIGVDSVTVRSAILAVAQVGSLELARWLDGYISKSEYRDDVFVNTA 386
           GEEAI+LFR+MI+KNI VDS+T+RSA+LA AQVGSLELARWLDGYISKSEYRDD FVNT 
Sbjct: 301 GEEAIKLFREMITKNIRVDSITMRSAVLASAQVGSLELARWLDGYISKSEYRDDTFVNTG 360

Query: 387 LIDMHAKCGSICFARSVFDRMVDKDIVSWSAMIMGYGLHGHGQEAIDLYNRMKQSGIRPN 446
           LIDM+AKCGSI  AR VFDR+ DKD+V WS MIMGYGLHGHGQEAI LYN MKQ+G+ PN
Sbjct: 361 LIDMYAKCGSIYLARCVFDRVADKDVVLWSVMIMGYGLHGHGQEAICLYNEMKQAGVCPN 420

Query: 447 DVTFVGLLTACKNSGLVKEGWELFHQMQDHGIEPHHQHYSCVVDLLGRAGYLNRAYDFIM 506
           D TF+GLLTACKNSGLVKEGWELFH M DHGIEPHHQHYSCVVDLLGRAGYLN+AYDFIM
Sbjct: 421 DGTFIGLLTACKNSGLVKEGWELFHLMPDHGIEPHHQHYSCVVDLLGRAGYLNQAYDFIM 480

Query: 507 SMPIKPGVSVWGALLSGCKIHRQVRLGEIAAEQLFLLDPYNTGHYVQLSNLYASAHLWNQ 566
           SMPIKPGVSVWGALLS CKIHR+VRLGEIAAEQLF+LDPYNTGHYVQLSNLYASAHLW +
Sbjct: 481 SMPIKPGVSVWGALLSACKIHRKVRLGEIAAEQLFILDPYNTGHYVQLSNLYASAHLWTR 540

Query: 567 VANVRLMMTQKGLNKDLGHSSIEINGNLETFHVGDRSHPRSKEIFEELDRLERRLKAAGY 626
           VANVRLMMTQKGLNKDLGHSSIEINGNLETF VGDRSHP+SKEIFEELDRLE+RLKAAGY
Sbjct: 541 VANVRLMMTQKGLNKDLGHSSIEINGNLETFQVGDRSHPKSKEIFEELDRLEKRLKAAGY 600

Query: 627 VAHMESVLHDLNHEEIEETLCNHSERLAVAYGIISTAPGTTLRITKNLRACVNCHSAIKL 686
           V HMESVLHDLNHEEIEETLC+HSERLAVAYGIISTAPGTTLRITKNLRAC+NCHSAIKL
Sbjct: 601 VPHMESVLHDLNHEEIEETLCHHSERLAVAYGIISTAPGTTLRITKNLRACINCHSAIKL 660

Query: 687 ISKLVDREIIIRDGKRFHHFKDGVCSCGDFW 718
           ISKLVDREIIIRD KRFHHFKDGVCSCGDFW
Sbjct: 661 ISKLVDREIIIRDAKRFHHFKDGVCSCGDFW 691

[Close]
BLAST of CmaCh04G002740 vs. NCBI nr
Match: gi|659090152|ref|XP_008445864.1| (PREDICTED: pentatricopeptide repeat-containing protein At3g12770 [Cucumis melo])

HSP 1 Score: 1221.5 bits (3159), Expect = 0.0e+00
Identity = 591/691 (85.53%), Postives = 640/691 (92.62%), Query Frame = 1 

Query: 27  MSLHSFSLSLSLTSLSTALSKAAATSQEALLRRKHLDQLYVQLIVSGLYKCGFLVIKFVN 86
           MSLHSFSLSL L+SLS+ALSK+  TS EA LRRKHLDQ+YVQLIVSGL+KC +LVIKFVN
Sbjct: 1   MSLHSFSLSLLLSSLSSALSKSTITSHEASLRRKHLDQVYVQLIVSGLHKCRYLVIKFVN 60

Query: 87  ACLHLRDVNYAHKVFREVLEPDILLWNGIIKGYTQNNIFAGAIRMYKDMQVSGVNPDCFT 146
           ACLH  DVNYAHK F EV EPDI LWN IIKGY Q NI  G IRMY DMQ+S V+P+CFT
Sbjct: 61  ACLHFGDVNYAHKAFCEVSEPDIPLWNAIIKGYAQKNIVGGPIRMYMDMQISQVHPNCFT 120

Query: 147 FLYVLKACGGMSVEGIGKQMHSQTFKYGFGSNVFVQNSLVSMYARYGQTSSARLVFDKLH 206
           FLYVLKACGG SVE +GKQ+H  TFKYGFGSNVFVQNSLVSMYA++GQTSSAR+VFDKLH
Sbjct: 121 FLYVLKACGGTSVE-LGKQIHGHTFKYGFGSNVFVQNSLVSMYAKFGQTSSARIVFDKLH 180

Query: 207 NRTVVSWTSIISGYVQNGDPMDALRVFKDMRQSTVKLDWIVLVSVMTAYTDMEDLGQGKA 266
           +RTVVSWTSIISGYVQNGDPM+AL+VFK+MRQ  VK DWI LVSVMTAYTD+ED+GQGK+
Sbjct: 181 DRTVVSWTSIISGYVQNGDPMEALKVFKEMRQCNVKPDWIALVSVMTAYTDVEDMGQGKS 240

Query: 267 IHSLVTKLGLEFEPDIVVSLTNMYAKLGRVEIARFFFNQMEKPNLLLWNAMISGYAKNGY 326
           IH LVTKLGLEFEPDIV+SLT MYAK G VE+ARFFF++MEKPNL+LWNAMISGYAKNGY
Sbjct: 241 IHGLVTKLGLEFEPDIVISLTTMYAKRGLVEVARFFFDRMEKPNLILWNAMISGYAKNGY 300

Query: 327 GEEAIELFRKMISKNIGVDSVTVRSAILAVAQVGSLELARWLDGYISKSEYRDDVFVNTA 386
           GEEAI+LFR+MISKNI VDS+T+RSAILA AQVGSLELA WLDGYISKSEYRDD FVNTA
Sbjct: 301 GEEAIKLFREMISKNIRVDSITMRSAILAGAQVGSLELATWLDGYISKSEYRDDTFVNTA 360

Query: 387 LIDMHAKCGSICFARSVFDRMVDKDIVSWSAMIMGYGLHGHGQEAIDLYNRMKQSGIRPN 446
           L+DM+AKCGSI  AR VFDR+ +KD+V WSAMIMGYGLHGHGQEAI LYN MKQ+G+ PN
Sbjct: 361 LVDMYAKCGSIYLARCVFDRVANKDVVLWSAMIMGYGLHGHGQEAIRLYNEMKQAGVSPN 420

Query: 447 DVTFVGLLTACKNSGLVKEGWELFHQMQDHGIEPHHQHYSCVVDLLGRAGYLNRAYDFIM 506
           D TF+GLLTACKNSGLVKEGWELFHQM +HGIEPHHQHYSC+VDLLGRAGYLN+AYDFIM
Sbjct: 421 DGTFIGLLTACKNSGLVKEGWELFHQMPNHGIEPHHQHYSCIVDLLGRAGYLNQAYDFIM 480

Query: 507 SMPIKPGVSVWGALLSGCKIHRQVRLGEIAAEQLFLLDPYNTGHYVQLSNLYASAHLWNQ 566
           SMPIKPGV+VWGALLS CKIHR+VRLGEIAA+QLF+LDPYNTGHYVQLSNLYASAHLW  
Sbjct: 481 SMPIKPGVTVWGALLSACKIHREVRLGEIAAQQLFILDPYNTGHYVQLSNLYASAHLWTH 540

Query: 567 VANVRLMMTQKGLNKDLGHSSIEINGNLETFHVGDRSHPRSKEIFEELDRLERRLKAAGY 626
           VANVRLMMTQKGLNKDLGHSSIEING+LETFHVGDRSHPRSKEIFEELDRLE+RLKAAGY
Sbjct: 541 VANVRLMMTQKGLNKDLGHSSIEINGSLETFHVGDRSHPRSKEIFEELDRLEKRLKAAGY 600

Query: 627 VAHMESVLHDLNHEEIEETLCNHSERLAVAYGIISTAPGTTLRITKNLRACVNCHSAIKL 686
           V HMESVLHDLNHEEIEETLCNHSERLAVAYGI+STAPGTTLRITKNLRACVNCHSAIK+
Sbjct: 601 VPHMESVLHDLNHEEIEETLCNHSERLAVAYGIVSTAPGTTLRITKNLRACVNCHSAIKI 660

Query: 687 ISKLVDREIIIRDGKRFHHFKDGVCSCGDFW 718
           ISKLVDREIIIRD KRFHHFKDGVCSCGDFW
Sbjct: 661 ISKLVDREIIIRDAKRFHHFKDGVCSCGDFW 690

[Close]
BLAST of CmaCh04G002740 vs. NCBI nr
Match: gi|225447423|ref|XP_002276196.1| (PREDICTED: pentatricopeptide repeat-containing protein At3g12770 [Vitis vinifera])

HSP 1 Score: 964.1 bits (2491), Expect = 1.3e-277
Identity = 454/661 (68.68%), Postives = 550/661 (83.21%), Query Frame = 1 

Query: 57  LRRKHLDQLYVQLIVSGLYKCGFLVIKFVNACLHLRDVNYAHKVFREVLEPDILLWNGII 116
           + ++HL+Q++ QL+VSGL + GFLV KFVNA  ++ ++ YA KVF E  EP + LWN II
Sbjct: 82  VHKRHLNQIHAQLVVSGLVESGFLVTKFVNASWNIGEIGYARKVFDEFPEPSVFLWNAII 141

Query: 117 KGYTQNNIFAGAIRMYKDMQVSGVNPDCFTFLYVLKACGGMSVEGIGKQMHSQTFKYGFG 176
           +GY+ +N F  AI MY  MQ SGVNPD FT   VLKAC G+ V  +GK++H Q F+ GF 
Sbjct: 142 RGYSSHNFFGDAIEMYSRMQASGVNPDGFTLPCVLKACSGVPVLEVGKRVHGQIFRLGFE 201

Query: 177 SNVFVQNSLVSMYARYGQTSSARLVFDKLHNRTVVSWTSIISGYVQNGDPMDALRVFKDM 236
           S+VFVQN LV++YA+ G+   AR+VF+ L +R +VSWTS+ISGY QNG PM+ALR+F  M
Sbjct: 202 SDVFVQNGLVALYAKCGRVEQARIVFEGLDDRNIVSWTSMISGYGQNGLPMEALRIFGQM 261

Query: 237 RQSTVKLDWIVLVSVMTAYTDMEDLGQGKAIHSLVTKLGLEFEPDIVVSLTNMYAKLGRV 296
           RQ  VK DWI LVSV+ AYTD+EDL QGK+IH  V K+GLEFEPD+++SLT MYAK G+V
Sbjct: 262 RQRNVKPDWIALVSVLRAYTDVEDLEQGKSIHGCVVKMGLEFEPDLLISLTAMYAKCGQV 321

Query: 297 EIARFFFNQMEKPNLLLWNAMISGYAKNGYGEEAIELFRKMISKNIGVDSVTVRSAILAV 356
            +AR FF+QME PN+++WNAMISGYAKNGY  EA+ LF++MISKNI  DS+TVRSAILA 
Sbjct: 322 MVARSFFDQMEIPNVMMWNAMISGYAKNGYTNEAVGLFQEMISKNIRTDSITVRSAILAC 381

Query: 357 AQVGSLELARWLDGYISKSEYRDDVFVNTALIDMHAKCGSICFARSVFDRMVDKDIVSWS 416
           AQVGSL+LA+W+  YI+K+EYR+DVFVNTALIDM AKCGS+  AR VFDR +DKD+V WS
Sbjct: 382 AQVGSLDLAKWMGDYINKTEYRNDVFVNTALIDMFAKCGSVDLAREVFDRTLDKDVVVWS 441

Query: 417 AMIMGYGLHGHGQEAIDLYNRMKQSGIRPNDVTFVGLLTACKNSGLVKEGWELFHQMQDH 476
           AMI+GYGLHG GQ+AIDL+  MKQ+G+ PNDVTFVGLLTAC +SGLV+EGWELFH M+ +
Sbjct: 442 AMIVGYGLHGRGQDAIDLFYAMKQAGVCPNDVTFVGLLTACNHSGLVEEGWELFHSMKYY 501

Query: 477 GIEPHHQHYSCVVDLLGRAGYLNRAYDFIMSMPIKPGVSVWGALLSGCKIHRQVRLGEIA 536
           GIE  HQHY+CVVDLLGR+G+LN AYDFI +MPI+PGVSVWGALL  CKI+R V LGE A
Sbjct: 502 GIEARHQHYACVVDLLGRSGHLNEAYDFITTMPIEPGVSVWGALLGACKIYRHVTLGEYA 561

Query: 537 AEQLFLLDPYNTGHYVQLSNLYASAHLWNQVANVRLMMTQKGLNKDLGHSSIEINGNLET 596
           AEQLF LDP+NTGHYVQLSNLYAS+ LW+ VA VR++M +KGL+KDLG+S IEING L+ 
Sbjct: 562 AEQLFSLDPFNTGHYVQLSNLYASSRLWDSVAKVRILMREKGLSKDLGYSLIEINGKLQA 621

Query: 597 FHVGDRSHPRSKEIFEELDRLERRLKAAGYVAHMESVLHDLNHEEIEETLCNHSERLAVA 656
           F VGD+SHPR KEIFEEL+ LERRLK AG++ H+ESVLHDLN EE EETLCNHSERLA+A
Sbjct: 622 FRVGDKSHPRFKEIFEELESLERRLKEAGFIPHIESVLHDLNQEEKEETLCNHSERLAIA 681

Query: 657 YGIISTAPGTTLRITKNLRACVNCHSAIKLISKLVDREIIIRDGKRFHHFKDGVCSCGDF 716
           YG+ISTAPGTTLRITKNLRAC+NCHSA KLISKLV+REI++RD  RFHHFK+GVCSC D+
Sbjct: 682 YGLISTAPGTTLRITKNLRACINCHSATKLISKLVNREIVVRDANRFHHFKNGVCSCRDY 741

Query: 717 W 718
           W
Sbjct: 742 W 742

[Close]
BLAST of CmaCh04G002740 vs. NCBI nr
Match: gi|645248038|ref|XP_008230115.1| (PREDICTED: pentatricopeptide repeat-containing protein At3g12770 [Prunus mume])

HSP 1 Score: 958.0 bits (2475), Expect = 9.4e-276
Identity = 452/660 (68.48%), Postives = 552/660 (83.64%), Query Frame = 1 

Query: 58  RRKHLDQLYVQLIVSGLYKCGFLVIKFVNACLHLRDVNYAHKVFREVLEPDILLWNGIIK 117
           ++ HL Q++ QL+V GL   GFL+ K VNA  +L  V YA +VF E  +PD+ LWN II+
Sbjct: 81  QKSHLGQIHAQLLVLGLQDSGFLITKLVNASSNLGFVTYARRVFDEFTDPDVFLWNAIIR 140

Query: 118 GYTQNNIFAGAIRMYKDMQVSGVNPDCFTFLYVLKACGGMSVEGIGKQMHSQTFKYGFGS 177
            Y+++ +FA A+ MY  MQ  GV+PD FTF +VLKAC G+    +G+++H Q  ++GF S
Sbjct: 141 CYSRHIVFADALGMYARMQAMGVSPDGFTFPHVLKACSGLPDLEMGRRVHGQVLRHGFES 200

Query: 178 NVFVQNSLVSMYARYGQTSSARLVFDKLHNRTVVSWTSIISGYVQNGDPMDALRVFKDMR 237
           + FVQN LV++YA+ G+   AR VFD L  RT+VSWTSIISGY QNG P++ALR+F  MR
Sbjct: 201 DAFVQNVLVALYAKCGRIERARAVFDCLSERTIVSWTSIISGYAQNGQPLEALRIFGLMR 260

Query: 238 QSTVKLDWIVLVSVMTAYTDMEDLGQGKAIHSLVTKLGLEFEPDIVVSLTNMYAKLGRVE 297
           +  VKLDWIVLVSV+ AYTD+EDLGQG ++H  + K+GLEFEPD++++LT MYAK G+V 
Sbjct: 261 KLNVKLDWIVLVSVLKAYTDVEDLGQGTSVHGCLIKIGLEFEPDLLIALTAMYAKSGQVM 320

Query: 298 IARFFFNQMEKPNLLLWNAMISGYAKNGYGEEAIELFRKMISKNIGVDSVTVRSAILAVA 357
            AR FF+QME PNL+LWNAMISGYAKNGY EEA+ELFR+MISK+I  DS+T+RSAILA A
Sbjct: 321 AARSFFDQMETPNLILWNAMISGYAKNGYAEEAVELFREMISKSIRPDSITMRSAILACA 380

Query: 358 QVGSLELARWLDGYISKSEYRDDVFVNTALIDMHAKCGSICFARSVFDRMVDKDIVSWSA 417
           QVGS+ LARW+D YISK+EY + VFVNTALIDM+AKCGS+ +AR VFDR  +KD+V WSA
Sbjct: 381 QVGSVGLARWMDDYISKTEYINHVFVNTALIDMYAKCGSVDYARMVFDRTPNKDVVVWSA 440

Query: 418 MIMGYGLHGHGQEAIDLYNRMKQSGIRPNDVTFVGLLTACKNSGLVKEGWELFHQMQDHG 477
           MI+GYGLHG G+EAIDLY+ M+Q+G+ PNDVTF+GLLTAC +SGLV+EGW+LFH M+ + 
Sbjct: 441 MIVGYGLHGRGREAIDLYHSMQQAGVPPNDVTFLGLLTACNHSGLVEEGWDLFHSMKHYR 500

Query: 478 IEPHHQHYSCVVDLLGRAGYLNRAYDFIMSMPIKPGVSVWGALLSGCKIHRQVRLGEIAA 537
           IEP +QHYSCVVDLLGRAG+L++AYDFIM MPI+PG+SVWGALLS CKI+R+V LGE AA
Sbjct: 501 IEPGNQHYSCVVDLLGRAGHLDQAYDFIMKMPIEPGISVWGALLSSCKIYRRVTLGEYAA 560

Query: 538 EQLFLLDPYNTGHYVQLSNLYASAHLWNQVANVRLMMTQKGLNKDLGHSSIEINGNLETF 597
           EQLF LDPYNTGHYVQLSNLYASA LW++VA VR++M +KGL KDLGHS IEING L+ F
Sbjct: 561 EQLFSLDPYNTGHYVQLSNLYASARLWDRVAKVRVLMREKGLTKDLGHSLIEINGKLQAF 620

Query: 598 HVGDRSHPRSKEIFEELDRLERRLKAAGYVAHMESVLHDLNHEEIEETLCNHSERLAVAY 657
           HVGD+SHPRSKEI+EEL+ LERRLK AG++ H ESVLHDLN EE EETLCNHSERLA+AY
Sbjct: 621 HVGDKSHPRSKEIYEELENLERRLKEAGFIPHAESVLHDLNQEETEETLCNHSERLAIAY 680

Query: 658 GIISTAPGTTLRITKNLRACVNCHSAIKLISKLVDREIIIRDGKRFHHFKDGVCSCGDFW 717
           G+IS+APGTTLRITKNLRACVNCHSA KLISKLV+REI++RD KRFHHFKDG CSCGD+W
Sbjct: 681 GLISSAPGTTLRITKNLRACVNCHSATKLISKLVNREIVVRDAKRFHHFKDGSCSCGDYW 740

[Close]
BLAST of CmaCh04G002740 vs. NCBI nr
Match: gi|1009127883|ref|XP_015880927.1| (PREDICTED: pentatricopeptide repeat-containing protein At3g12770 [Ziziphus jujuba])

HSP 1 Score: 947.6 bits (2448), Expect = 1.3e-272
Identity = 456/707 (64.50%), Postives = 566/707 (80.06%), Query Frame = 1 

Query: 12  TSVSQAAAIFLGL-PAMSLHSFSLSLSLTSLSTALSKAAATSQEALLRRKHLDQLYVQLI 71
           TS++  +++ L L P     SF    +L S   +L + +        +++HLDQ++ QL+
Sbjct: 52  TSLNHYSSLSLRLEPYYDHESFFYGFNLDSFYASLIENST-------QKRHLDQIHAQLL 111

Query: 72  VSGLYKCGFLVIKFVNACLHLRDVNYAHKVFREVLEPDILLWNGIIKGYTQNNIFAGAIR 131
             GL++ GFLV KFVN   +L  + YA KVF E  EP + LWN II+GY+++N F  AI 
Sbjct: 112 ALGLHESGFLVTKFVNVASNLGYIWYARKVFDEFNEPHVFLWNAIIRGYSKHNKFVEAIE 171

Query: 132 MYKDMQVSGVNPDCFTFLYVLKACGGMSVEGIGKQMHSQTFKYGFGSNVFVQNSLVSMYA 191
           MY  MQ  G++PD FT  +VLKACG +    +G+++H Q F+ GF S+ FVQNSLV++Y+
Sbjct: 172 MYSRMQALGISPDSFTLPHVLKACGSLLALEVGRRIHGQIFRIGFESDSFVQNSLVALYS 231

Query: 192 RYGQTSSARLVFDKLHNRTVVSWTSIISGYVQNGDPMDALRVFKDMRQSTVKLDWIVLVS 251
           + GQ   AR+VFD L +RT+VSWTSIISGY QNG PM+ALR+F  MR+  VKLD IVLVS
Sbjct: 232 KCGQIQRARIVFDGLCDRTIVSWTSIISGYAQNGQPMEALRIFSQMRRLDVKLDRIVLVS 291

Query: 252 VMTAYTDMEDLGQGKAIHSLVTKLGLEFEPDIVVSLTNMYAKLGRVEIARFFFNQMEKPN 311
           ++ AYTD+EDL QGKA+H  + K+GLEFEPD+++SLT MYAK G+V +AR FF++ +  N
Sbjct: 292 ILKAYTDVEDLEQGKAVHGCLIKMGLEFEPDLLISLTAMYAKSGQVMVARTFFDETKTSN 351

Query: 312 LLLWNAMISGYAKNGYGEEAIELFRKMISKNIGVDSVTVRSAILAVAQVGSLELARWLDG 371
           ++LWNAMISGYAKNGY EEA+ELFR+MISKNI  DSVT+ SAILA AQVGSLELARW+D 
Sbjct: 352 VILWNAMISGYAKNGYAEEAVELFREMISKNIRTDSVTMNSAILACAQVGSLELARWMDD 411

Query: 372 YISKSEYRDDVFVNTALIDMHAKCGSICFARSVFDRMVDKDIVSWSAMIMGYGLHGHGQE 431
           Y+  SE R+D FVNTALIDM+AKCG++ FAR VFDR  DKD+V WSAMIMGYGLHG GQE
Sbjct: 412 YVRMSECRNDTFVNTALIDMYAKCGNVEFARKVFDRTPDKDVVVWSAMIMGYGLHGRGQE 471

Query: 432 AIDLYNRMKQSGIRPNDVTFVGLLTACKNSGLVKEGWELFHQMQDHGIEPHHQHYSCVVD 491
           AI LY+ M+Q+G+ PNDVTFVGLLTAC +SG V+EGW LFH M+D+GIEP HQHY+CVVD
Sbjct: 472 AIVLYHDMEQAGVTPNDVTFVGLLTACNHSGFVEEGWRLFHCMKDYGIEPRHQHYACVVD 531

Query: 492 LLGRAGYLNRAYDFIMSMPIKPGVSVWGALLSGCKIHRQVRLGEIAAEQLFLLDPYNTGH 551
           LLGRAG++++AYDFIM+MP+ PG+SVWGALL  CKI+R+V  GE AAEQLF LDPYNTGH
Sbjct: 532 LLGRAGFVDKAYDFIMNMPMPPGISVWGALLGSCKIYRRVSFGEYAAEQLFSLDPYNTGH 591

Query: 552 YVQLSNLYASAHLWNQVANVRLMMTQKGLNKDLGHSSIEINGNLETFHVGDRSHPRSKEI 611
           YVQLSNLYASA +W+ V  VR++M +KGL+KDLG+S IEING L+ F VGD+SHPRSKEI
Sbjct: 592 YVQLSNLYASARMWDHVEKVRVLMKEKGLSKDLGYSLIEINGKLQAFRVGDKSHPRSKEI 651

Query: 612 FEELDRLERRLKAAGYVAHMESVLHDLNHEEIEETLCNHSERLAVAYGIISTAPGTTLRI 671
           +EELD LERRL+ AG+V H ESVLHDLN+EE E+TLCNHSERLA+A+G+ISTAPGTTLRI
Sbjct: 652 YEELDNLERRLREAGFVPHTESVLHDLNYEETEQTLCNHSERLAIAFGLISTAPGTTLRI 711

Query: 672 TKNLRACVNCHSAIKLISKLVDREIIIRDGKRFHHFKDGVCSCGDFW 718
           TKNLRACVNCHSA KLISKLV+REI++RD  RFHHFK+G CSCGD+W
Sbjct: 712 TKNLRACVNCHSATKLISKLVNREIVVRDSNRFHHFKNGSCSCGDYW 751

The following BLAST results are available for this feature:
BLAST of CmaCh04G002740 vs. Swiss-Prot
Match NameE-valueIdentityDescription
PP224_ARATH4.9e-24057.66Pentatricopeptide repeat-containing protein At3g12770 OS=Arabidopsis thaliana GN... [more]
PPR32_ARATH2.4e-15441.07Pentatricopeptide repeat-containing protein At1g11290, chloroplastic OS=Arabidop... [more]
PP258_ARATH3.1e-15442.65Pentatricopeptide repeat-containing protein At3g26782, mitochondrial OS=Arabidop... [more]
PP341_ARATH1.1e-14641.85Pentatricopeptide repeat-containing protein At4g30700 OS=Arabidopsis thaliana GN... [more]
PP320_ARATH2.4e-14640.03Pentatricopeptide repeat-containing protein DOT4, chloroplastic OS=Arabidopsis t... [more]
BLAST of CmaCh04G002740 vs. TrEMBL
Match NameE-valueIdentityDescription
A0A0A0KLB9_CUCSA0.0e+0085.82Uncharacterized protein OS=Cucumis sativus GN=Csa_5G175830 PE=4 SV=1[more]
D7SQP8_VITVI9.2e-27868.68Putative uncharacterized protein OS=Vitis vinifera GN=VIT_12s0134g00210 PE=4 SV=... [more]
A0A061EHU3_THECC9.2e-27065.30Mitochondrial editing factor 22 OS=Theobroma cacao GN=TCM_019437 PE=4 SV=1[more]
A0A0D2TXW8_GOSRA1.9e-26766.06Uncharacterized protein OS=Gossypium raimondii GN=B456_008G055100 PE=4 SV=1[more]
W9S3H1_9ROSA9.5e-26765.40Uncharacterized protein OS=Morus notabilis GN=L484_007616 PE=4 SV=1[more]
BLAST of CmaCh04G002740 vs. TAIR10
Match NameE-valueIdentityDescription
AT3G12770.12.7e-24157.66 mitochondrial editing factor 22[more]
AT1G11290.11.4e-15541.07 Pentatricopeptide repeat (PPR) superfamily protein[more]
AT3G26782.11.8e-15542.65 Tetratricopeptide repeat (TPR)-like superfamily protein[more]
AT4G30700.16.1e-14841.85 Pentatricopeptide repeat (PPR) superfamily protein[more]
AT4G18750.11.4e-14740.03 Pentatricopeptide repeat (PPR) superfamily protein[more]
BLAST of CmaCh04G002740 vs. NCBI nr
Match NameE-valueIdentityDescription
gi|778700750|ref|XP_011654911.1|0.0e+0085.82PREDICTED: pentatricopeptide repeat-containing protein At3g12770 [Cucumis sativu... [more]
gi|659090152|ref|XP_008445864.1|0.0e+0085.53PREDICTED: pentatricopeptide repeat-containing protein At3g12770 [Cucumis melo][more]
gi|225447423|ref|XP_002276196.1|1.3e-27768.68PREDICTED: pentatricopeptide repeat-containing protein At3g12770 [Vitis vinifera... [more]
gi|645248038|ref|XP_008230115.1|9.4e-27668.48PREDICTED: pentatricopeptide repeat-containing protein At3g12770 [Prunus mume][more]
gi|1009127883|ref|XP_015880927.1|1.3e-27264.50PREDICTED: pentatricopeptide repeat-containing protein At3g12770 [Ziziphus jujub... [more]
Annotated Terms
The following terms have been associated with this gene:
Vocabulary: INTERPRO
TermDefinition
IPR002885Pentatricopeptide_repeat
IPR011990TPR-like_helical_dom_sf
Vocabulary: Molecular Function
TermDefinition
GO:0008270zinc ion binding
GO:0005515protein binding
GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
Category Term Accession Term Name
biological_process GO:0008150 biological_process
cellular_component GO:0005575 cellular_component
molecular_function GO:0005515 protein binding
molecular_function GO:0008270 zinc ion binding
Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
CmaCh04G002740.1CmaCh04G002740.1mRNA


InterPro
Analysis Name: InterPro Annotations of Cucurbita maxima
Date Performed: 2017-05-20
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR002885Pentatricopeptide repeatPFAMPF01535PPRcoord: 183..207
score: 1.3coord: 314..342
score: 3.5E-10coord: 211..239
score: 7.5E-8coord: 285..308
score:
IPR002885Pentatricopeptide repeatPFAMPF13041PPR_2coord: 410..457
score: 3.1E-12coord: 107..154
score: 7.
IPR002885Pentatricopeptide repeatTIGRFAMsTIGR00756TIGR00756coord: 314..345
score: 2.2E-8coord: 448..480
score: 6.2E-5coord: 413..446
score: 1.6E-7coord: 112..144
score: 1.4E-5coord: 211..244
score: 2.
IPR002885Pentatricopeptide repeatPROFILEPS51375PPRcoord: 547..581
score: 5.404coord: 481..511
score: 5.47coord: 209..243
score: 11.257coord: 380..410
score: 7.278coord: 310..344
score: 11.794coord: 108..142
score: 10.282coord: 446..480
score: 11.115coord: 279..309
score: 6.193coord: 411..445
score: 12.288coord: 178..208
score: 7
IPR011990Tetratricopeptide-like helical domainGENE3DG3DSA:1.25.40.10coord: 409..437
score: 2.2E-6coord: 86..157
score: 2.2E-6coord: 212..343
score: 2.
IPR011990Tetratricopeptide-like helical domainunknownSSF48452TPR-likecoord: 281..439
score: 1.6
NoneNo IPR availablePANTHERPTHR24015FAMILY NOT NAMEDcoord: 59..588
score:
NoneNo IPR availablePANTHERPTHR24015:SF477SUBFAMILY NOT NAMEDcoord: 59..588
score:

Synteny
The following gene(s) are orthologous to this gene:
GeneOrthologueOrganismBlock
CmaCh04G002740Cucsa.166060Cucumber (Gy14) v1cgycmaB0471
CmaCh04G002740Cla020068Watermelon (97103) v1cmawmB724
CmaCh04G002740Csa5G175830Cucumber (Chinese Long) v2cmacuB747
CmaCh04G002740MELO3C011735Melon (DHL92) v3.5.1cmameB654
CmaCh04G002740CSPI05G08770Wild cucumber (PI 183967)cmacpiB757
CmaCh04G002740CmoCh04G002790Cucurbita moschata (Rifu)cmacmoB728
CmaCh04G002740Lsi04G008070Bottle gourd (USVL1VR-Ls)cmalsiB677
CmaCh04G002740Cp4.1LG01g04330Cucurbita pepo (Zucchini)cmacpeB720
CmaCh04G002740MELO3C011735.2Melon (DHL92) v3.6.1cmamedB738
CmaCh04G002740CsaV3_5G006210Cucumber (Chinese Long) v3cmacucB0883
CmaCh04G002740Cla97C02G039600Watermelon (97103) v2cmawmbB741
CmaCh04G002740Bhi07G000887Wax gourdcmawgoB0894
CmaCh04G002740Bhi07G000956Wax gourdcmawgoB0910
CmaCh04G002740CsGy5G006170Cucumber (Gy14) v2cgybcmaB674
CmaCh04G002740Carg25673Silver-seed gourdcarcmaB1179
The following gene(s) are paralogous to this gene:

None

The following block(s) are covering this gene:
GeneOrganismBlock
CmaCh04G002740Cucurbita maxima (Rimu)cmacmaB531
CmaCh04G002740Cucurbita moschata (Rifu)cmacmoB730
CmaCh04G002740Wild cucumber (PI 183967)cmacpiB763
CmaCh04G002740Cucumber (Chinese Long) v2cmacuB754
CmaCh04G002740Watermelon (Charleston Gray)cmawcgB642
CmaCh04G002740Watermelon (97103) v1cmawmB650
CmaCh04G002740Cucurbita pepo (Zucchini)cmacpeB722
CmaCh04G002740Silver-seed gourdcarcmaB1171
CmaCh04G002740Cucumber (Chinese Long) v3cmacucB0850
CmaCh04G002740Cucumber (Chinese Long) v3cmacucB0892