CsGy5G006000 (gene) Cucumber (Gy14) v2 | Cucurbit Genomics Database (CuGenDB)

Overview


Name	CsGy5G006000
Type	gene
Organism	Cucumis sativus (Cucumber (Gy14) v2)
Description	RING-finger ubiquitin ligase
Location	Chr5 : 4002323 .. 4009043 (-)

Genome Viewer

Gene Expression

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: CDSexonthree_prime_UTR

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGGAGAACGAAGCCGCCACCACCACTACCTCCACCAAACTTGGTTCTGATGGAGTCAAGCCAACCCCCGCCGCCTCCTCCGATAATGATCAAAACCCCAATTCCAATTCCAATCCACCCCCTACCTCCCTTTCTGACCCCCAGAATGACACTACTGGATCCGACTCCACCTCCCTTCAAACCCTTCTCGCCACTCCTCTAGAACTCCCTTCACTAATCTCACCCAGGTCGATGCTGACCTTGCCCTCGCTCGTACCCTTCAAGAACAGGTCCTCTCTCTCGCTTCTAATCTCTTCTTGTTTCTCTTCAATTTCAGCTTTCTTTTCTTGTCTTGTTCTCTCTTCAATTCGGTTTGTTGTTGGCTGCTTTTGTAGCTTTCTGATGAAAATCCTTTCTTGATTTTTCTTCCGTGTTTAAGAATTTTAATTTTGTGGTGGACTTGGACGTTCCCCTTTCTGGTTTTCTCAGTAGCAAACAATTATCCTGATCCCCGAGAGTCTATTTGTTGTTTAGGTTCTGGATTTAGTTTTTTACTTTCTTGATTATCTGGTTGCATTTCATTGTCCTTGATTGCCCTGGTTTTTAGCATCGACTTCGTTTGACTTTGTTAGTTTTCTTCTGGGTTGCGTAGGCAAGGGTGGAAGACTTGGGGAAGTCGTTCACAAAAAAGAAAAAAATAACCCAACTGTATAATGACTAATGAAGATGGTTTTGTGTCTTTCCTTCATCTATTGGTATTGATTGATTACTTTGTTTTCTTAAATATGAGCTTACGTGTGTCAGTTAATGCAAAGTGTTTGAATCTTGATTTGGAACTGATGACTTTCCATTTTATGGAGGAGGGGGGATTTAAGATGCATGATTGACCGACTCCGGTGCTACATTGTTGTTCAGTTGAAATTTTGTTTTCAAATGTTGTGTTTGTCTTGTTAGTAATTGAAAGAGTGATGGGTGGGAAGATTTCACGCAAGACTCTATCCTCATCTTACTTGCTCAGCATGTTTGTCTTGATATTGGTTGTAGGAGATTCTATATTTTGGAGGAAAAAAGGGGTTTTAGTGATATTTTCAATTGACAATGACTAATTATGAGCAGGAAAGGGCATATCTGATGCTTAGAATGACGAGTGAGGGGAGTGATTTTGGAAGTTGGGAAGCTGGAAGTTATGTATTAGATGATGAGGATGGTTTTGGTGATCCCCATGATCATACAGAATCTGATGGGGATGATGATGAAGATGGAACGGATGTCAATGATGACGAGGATGTGTTTGATGTGCATGCACACGAAGATGGTGGAGAGCATAACAACTCCAACTTCGAACTTGATCCAGGTAATTTTTCAAGTGATGAGGCTTATGCTAGAGCCCTACAAGATGCTGAAGACAGAGAAATGGCTGCCAGACTATTGGCCCTTGCTAGATTACAAGATCGTGAGTATACTTGGCCATGTGGCTCTCCTTGTAATGCATTGTTACTTATGTGGAGGTTTCTAAATCATGTAAGACTAAAATATCTTGTTTCTTATATTACAGAGGACGCAGATGACACAGATGATCAAGGTGAAAACTCCCAGGTATTTTTTTTACTTTGATTTTCCACTCCATTCTTTGTTGCAGTGAATTTTTTATTAACATTGAAGATATTTATATTCATTTAGACTTACTTAAATAGGCTACATTGATTCTGAAAATTCTCACTATGGAATCCATGTGGAATAAGGGAAATCTTATCAGACAAAAAAGGGGAAATCTTATGTGGAAATCCTTGCTATGACTGTTATGTAGCTAGAGGTTGAACTTTATGGAATTGATGCAGAATGAGGAAAGTATTGTGTTGAAAATCTTGCTCTGACTTTACCCACTTTGATAGCATGGAAACTACAACTTCTTAATTCATTTATCGATCTAAAGAGGCTAGCAGCCAAAATTTCCATTCCATTAATTTTATAGTTAGTATTGTTTGCTTGGCTCATTTTGCTGGGCTTTTCTTTTGCATGGTTCTTTTTATTCCTTCCTTTCCACAATTAAAAGTTGGTCCTCGTCCATTTTTTTAATAGCCCCTGTCCAAACTCTCAAGTACTTGATTGTAGAAAAGTGTCATCCACCATTTAAACTTGAGCATAAGATCCTGCTTCTCGGCTACTCCTTTATTCATTATCATTCATACCTCACAAGTTCTAGTATGCTTTTCAACATCATCAATGCCATGGCTTCCTTCTTTGTTCCCCCTTTGAGAACTAGGATTCAGATGAATGAAAGGATTTTCAAAATGTGTTCTCTTTTGGATGTATTTTGGGATCTTGCCAGATACATTTGATTTTTAATATTTCATGTTGTTCCTTGCCCAAACCTTCTTTTTTATTTTACTTCTTTTATCAATGCAAATTTGGATTTTTTTTTTCCTTTTGCAGCTCCTTGGTTTCTTGAAGAATTTCTAACCTTCTTTTCTGCTCCTTATCATCTAATTGATGTTACTTTTATTTTCCTAAGAAACATAAATGGTATTATGTGTGTTAATGTCAAGTTGTCGACCAATTGTCACTCCTCCAAAAATGTCCATGTGTCTCCATGCTTCTTACTTCTTAGGCTGGTTTTCACCATCCAAACGTTCTCCTTCCAAGCCAATGTATTTTTAAATTGGAAGTATTCTTAGTAATTGTAAGTAGAGCTTCAAAAGTTAAGAGGAAATTATGTTAGCGGGGTGATAGTCAGCAGCCTGTGCCATAATGCCGTGGAAATAACCACTGTCATCACCAATGAAAAAGTGATGCAATAGTAGTCCTGTAATCTTCAATTGCGGCCTGGTACGTGGGAGAACCATTTTTAATCTCCATGGTGGCTTCGGCCACAATTTTGTTGAGACATACTCTATAGTCCAGCCAGCAGTGGAAGTTGTCAACAACTTCAAAATCAATTTTCTTTTTTTTGGACAAGAAATTTCAAAATAGATTTTCTTGAGGATGAGGCAGATGAAAGTTCGTTTGCACTATATTTGATCATATTTCTCTAAACAAGTTTGGAACAGTTTTATGAAATTACCCTTGAAAACTTTTGACCCTTCATATAATCATATAGAACTCATTCAAATAGCCAGACAATCTAAGAAGATTTAGATGTGTTTTAGATCTATTACAATCATGAAAATATACTTTTCTGAAAGGTGCAATGGCAGCCCAATAATCTTCCCTTTAGACCTCTTGGCAAAACATTTCTTCCTTTGATTTAAAAAGGTAATATTCATAATTCCCGAATTCGATCGCTACCCCTGTTTGACCAAGTGGCGTTCTTCATGTGCTAACCTAATTTGAAGTATGATAGAGGGTCTTTTTTTAAAATAGAATTAATATCTGTGACTGTTTGGGTTAAGCTTACGCAGTCCTTGACTAATCTCATTGGACAATCTACTTGATCCGAGCTTACGCGTAACTTAACTAATCTCATCGGACAATCTACCTAACCCGACAATATTTAGGTGTCAACGTAACTCCTAGGATATCAATTCCTAGGTAGGTGACCACAATGGATTGAACCTATGTCTTCTTAGCTCTTTATCATGTCTTCTTTTTTACCACCAAGCCTCTGATAGAGTTAAAAAAGTGAATTTAATGTTAGTATTATATTCTTACAAAGAAGAGATAAAAACTACCGGACATTTAAGTTCTATCCAAAATGAAAATCAAAGACCTTAAGTCCCATTTGGTAACCATTTGGTTTTTTGTTTTTGTTTTTGAAAATTAAGCCTATAAATGCTATTTCCACCTCCAAATTTCTTACTTTTATCTAATTTTTGTCAATGGTTTAAAAAACTAAGCTAACATTTTGAAGCTACTTTCTTTAGTTTTCAAAATTTGACTTGGTTGTTTAAACCATTGATAAAAAGTAAATAACAAAGGAAGAAATTTGGAGGTGGGAGTAATGTCTATAGACTTCAATTTTTTTTAAGAAAAGAACAAAATGGTTACCAAATGGGCCTTAGTTATTTTCTCCTAACGAACTAACTACCACTCTCCTTTCATACTCACAATCTATTCCCCCCATGTCTCCTATCACCACAATCTAAATTCTGTTACTAACATAATTTACGGAGGAATAGATCCAAATCCTTACTCTTCTTCTAACCTGCTATACATTCTATTCCCACCTTGTTTGGATGACCCACAAAATGTTAAAACGTTCTTCAAGCAAAAGTAAAAAGACCATGGAGGTTATTATTTTTGTCAATATCATATTTGTATTTCAATTCTTATGTGAAGGTCAATGAGTGGCACTATATAATCCAATTTTTATAGGGAATCACATAAAGAACTTAAGCACGTATCTTCCAAATCGCTGTGCAGACAATCTTTTTTTGGGATACGATTACTTGAAATATTGCTTTGATTTTCAACACTTGTATTTCTTCGACAATTATTTACTGCTTCCCGAACAGAGACCTTTGCCCTGCAGACATCTGCTCAGCAGAAAACTTATGCCCAATGATTCACAAGGGGCCAGGCTGCAAAACCCTATTCCATCTCTTGCTCCAGTTACCTGAAAAGGCTGGAGAAGGGGGTGGAATTTCCCAGTTGATAAAATGTAATTGGCATATCTGAGATTCTTTTAGTTTAATTACTCCTTAATGATAACTGATAAGGTATCTTCTCTTCCCAGCTACCGATACCATGAATTTCTTATCAACCCCTTCTTTGAGCCATTCCTATTTACTTATCTGTCTCGGAAAGAAAAAAGAAGGAAAATAAAAGAAAAACTTGTTATCTGCCACATCGATAGGTCATGCTGTTTAGAGTTTTCTTTCTGTTCAATTTGCAAATTCAAGCCTGCCTCCTCTGTTTTATCCAACTAAGAGATCTTCTTCCTTGCATCTTGCTTTTAGTGGGTGTTATTAAAAGTTCATCATTCTGACTCTTAGGATAGTGATGAAGTTGTTTCTTATATAAAGAAAAAAAAAGGTGACTCTGTGCCCTGTCACTTCAGAATTCTGAGACCTTAACATTGTCTGTTATACTTACTAAATTTCTTTTCAACTAGTGGAAAATGTTCTTTCAAATTTGACATAGTGTAAAAAATAATCTTTTTCGCCATAGTTTATTTTTCTTCTTAGAAAAATAAAATTGTAGCCTTTTGAACTAGTTAGGATAGAAATAAGTTTTCAACCATAGCCCAGAAAGTAGCTATACTCAGTATTTTAGATGGTATCTGACTATCGTTCTATTAAACACCCATTGGGGCTTGGTTTGCAGGATACGTGGGAGGACGTCGACCCAGATGAACTATCGTATGAGGTGAGTTTGGCTTGCTGGAGTGTTGGTGCTTTCTTACTGTTGATTCCTGAGAGGCTTATTTATATTTCAGGAGTTGCTTGCATTGGGTGAAGTGGTAGGAACTGAAAGTAGAGGGCTATCTGCTGATACAATTGCTTCTCTACCCTCCATAAACTTCAAGGCAGGGAGCGATCAGACTGGAAGCAATGATTCGTAAGTGATTTCGAGCAAGGCTTTTTTGTCCTTTCTTGCCATTATTTTTTGTTTACTTAGCTTTTGGTTCTGGTGCTCTTTTCAGGTGTGTCATTTGTCGATTGGATTTTGAGGACGGTGAAACCTTGACTGTTCTCTCTTGCAAACACTCCTACCATTCTGACTGCGTAACTAATTGGTTAAAAATAAACAAGGTAAAATCCATTTACATGCATGTTGCACTAAGTTACTTATGGATGTATGCATATGGTACAATGAACACCCATCCCAACAAATGGGGTTAATAGTGTAGCATTTAGCAACAGAAAAAATCTTTCACTCAACAAGTGTTCTTCAAACAAAGCTAGATAGTTTTCTATCCCTAGGCTCACCAACCAACCTGGACTTTGGTTTTGATTATTCTTACTCATATCAAAACTATAAGGATAGGAAAAGAGCTTGTTCTATTTGGAGGTCTTTAGATTCGTAAGATCATAATGGAGTGCCCTTTGCTTGATATTAAATTATTAAAGCTCTCACTACCCTACAACTATTATAGCATGGAATGGAGGGTTAAATCTTGACAATACCATGGCAAATATGAAATGATAACGTACGTATAGCCAACGAAACTCAAGATAACTAAAGCTTGGTGTTGTGCAGATCTGCCCTGTTTGCAGTGCTGAAGTCTCCACAGCTACCGGAAGCAGTTAGTCGTAGCATGTAGTATTATGAATGTACTAAACGAAACATTTTACATATAAGTTAAAAATCAAGAAGGATCTTAATTTCTGTTTTCATCATTTTGGGAAGTACCCATTTCAGTTGAATGTCTACGGAAAATGTGTATGGTGGGTCATCGTACAATCTCAGGTTTCGTTATGTAAACCAAACCTAGGAAATTAGTTTTGCCTTTGTTCTTGTTCATCATATATGAATCTATTTTTTCTTTTCTTTTCTTTTTCCTCTTTTGAGTTTCTCGTTAATATATCCTAAATCTTCCCTCTCTCCTTTCTGTTTGTAAACATAAAATTTGCTCAGTTGGAAGAGCTGTGAGTTATGAATCCTACTTTGATCTTTCTTTTGTACTCCTTAAGGTTTCTATTTCTACTGTGCGTTTTCAATTGTTATATCATATGGTAAAGATTTTACTGATGTATGAACATGAATTCTCGCTAATGTTGCTCGATTAACATATGGGTGTGTTGGTAATCACGAGATTTGGTTTACCAAATTTGTTATAATATTTGAAATAGTAGTATTAATA

mRNA sequence

ATGGAGAACGAAGCCGCCACCACCACTACCTCCACCAAACTTGGTTCTGATGGAGTCAAGCCAACCCCCGCCGCCTCCTCCGATAATGATCAAAACCCCAATTCCAATTCCAATCCACCCCCTACCTCCCTTTCTGACCCCCAGAATGACACTACTGGATCCGACTCCACCTCCCTTCAAACCCTTCTCGCCACTCCTCTAGAACTCCCTTCACTAATCTCACCCAGGTCGATGCTGACCTTGCCCTCGCTCGAAAGGGCATATCTGATGCTTAGAATGACGAGTGAGGGGAGTGATTTTGGAAGTTGGGAAGCTGGAAGTTATGTATTAGATGATGAGGATGGTTTTGGTGATCCCCATGATCATACAGAATCTGATGGGGATGATGATGAAGATGGAACGGATGTCAATGATGACGAGGATGTGTTTGATGTGCATGCACACGAAGATGGTGGAGAGCATAACAACTCCAACTTCGAACTTGATCCAGGTAATTTTTCAAGTGATGAGGCTTATGCTAGAGCCCTACAAGATGCTGAAGACAGAGAAATGGCTGCCAGACTATTGGCCCTTGCTAGATTACAAGATCAGGACGCAGATGACACAGATGATCAAGGTGAAAACTCCCAGGATACGTGGGAGGACGTCGACCCAGATGAACTATCGTATGAGGAGTTGCTTGCATTGGGTGAAGTGGTAGGAACTGAAAGTAGAGGGCTATCTGCTGATACAATTGCTTCTCTACCCTCCATAAACTTCAAGGCAGGGAGCGATCAGACTGGAAGCAATGATTCGTGTGTCATTTGTCGATTGGATTTTGAGGACGGTGAAACCTTGACTGTTCTCTCTTGCAAACACTCCTACCATTCTGACTGCGTAACTAATTGGTTAAAAATAAACAAGATCTGCCCTGTTTGCAGTGCTGAAGTCTCCACAGCTACCGGAAGCAGTTAGTCGTAGCATGTAGTATTATGAATGTACTAAACGAAACATTTTACATATAAGTTAAAAATCAAGAAGGATCTTAATTTCTGTTTTCATCATTTTGGGAAGTACCCATTTCAGTTGAATGTCTACGGAAAATGTGTATGGTGGGTCATCGTACAATCTCAGGTTTCGTTATGTAAACCAAACCTAGGAAATTAGTTTTGCCTTTGTTCTTGTTCATCATATATGAATCTATTTTTTCTTTTCTTTTCTTTTTCCTCTTTTGAGTTTCTCGTTAATATATCCTAAATCTTCCCTCTCTCCTTTCTGTTTGTAAACATAAAATTTGCTCAGTTGGAAGAGCTGTGAGTTATGAATCCTACTTTGATCTTTCTTTTGTACTCCTTAAGGTTTCTATTTCTACTGTGCGTTTTCAATTGTTATATCATATGGTAAAGATTTTACTGATGTATGAACATGAATTCTCGCTAATGTTGCTCGATTAACATATGGGTGTGTTGGTAATCACGAGATTTGGTTTACCAAATTTGTTATAATATTTGAAATAGTAGTATTAATA

Coding sequence (CDS)

ATGGAGAACGAAGCCGCCACCACCACTACCTCCACCAAACTTGGTTCTGATGGAGTCAAGCCAACCCCCGCCGCCTCCTCCGATAATGATCAAAACCCCAATTCCAATTCCAATCCACCCCCTACCTCCCTTTCTGACCCCCAGAATGACACTACTGGATCCGACTCCACCTCCCTTCAAACCCTTCTCGCCACTCCTCTAGAACTCCCTTCACTAATCTCACCCAGGTCGATGCTGACCTTGCCCTCGCTCGAAAGGGCATATCTGATGCTTAGAATGACGAGTGAGGGGAGTGATTTTGGAAGTTGGGAAGCTGGAAGTTATGTATTAGATGATGAGGATGGTTTTGGTGATCCCCATGATCATACAGAATCTGATGGGGATGATGATGAAGATGGAACGGATGTCAATGATGACGAGGATGTGTTTGATGTGCATGCACACGAAGATGGTGGAGAGCATAACAACTCCAACTTCGAACTTGATCCAGGTAATTTTTCAAGTGATGAGGCTTATGCTAGAGCCCTACAAGATGCTGAAGACAGAGAAATGGCTGCCAGACTATTGGCCCTTGCTAGATTACAAGATCAGGACGCAGATGACACAGATGATCAAGGTGAAAACTCCCAGGATACGTGGGAGGACGTCGACCCAGATGAACTATCGTATGAGGAGTTGCTTGCATTGGGTGAAGTGGTAGGAACTGAAAGTAGAGGGCTATCTGCTGATACAATTGCTTCTCTACCCTCCATAAACTTCAAGGCAGGGAGCGATCAGACTGGAAGCAATGATTCGTGTGTCATTTGTCGATTGGATTTTGAGGACGGTGAAACCTTGACTGTTCTCTCTTGCAAACACTCCTACCATTCTGACTGCGTAACTAATTGGTTAAAAATAAACAAGATCTGCCCTGTTTGCAGTGCTGAAGTCTCCACAGCTACCGGAAGCAGTTAG

Protein sequence

MENEAATTTTSTKLGSDGVKPTPAASSDNDQNPNSNSNPPPTSLSDPQNDTTGSDSTSLQTLLATPLELPSLISPRSMLTLPSLERAYLMLRMTSEGSDFGSWEAGSYVLDDEDGFGDPHDHTESDGDDDEDGTDVNDDEDVFDVHAHEDGGEHNNSNFELDPGNFSSDEAYARALQDAEDREMAARLLALARLQDQDADDTDDQGENSQDTWEDVDPDELSYEELLALGEVVGTESRGLSADTIASLPSINFKAGSDQTGSNDSCVICRLDFEDGETLTVLSCKHSYHSDCVTNWLKINKICPVCSAEVSTATGSS

Homology

[Close]

BLAST of CsGy5G006000 vs. NCBI nr
Match: XP_004143619.1 (PREDICTED: E3 ubiquitin ligase BIG BROTHER-related [Cucumis sativus] >KGN50445.1 hypothetical protein Csa_5G175690 [Cucumis sativus])

HSP 1 Score: 429.5 bits (1103), Expect = 1.0e-116
Identity = 299/323 (92.57%), Postives = 301/323 (93.19%), Query Frame = 0


Query: 1   MENEAATTXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXDPQNDTTGSDSTSLQ 60
           MENEAATTXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXDPQNDTTGSDSTSLQ
Sbjct: 1   MENEAATTXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXDPQNDTTGSDSTSLQ 60

Query: 61  T----LLATPLELPSLISPRSML--TLPSLERAYLMLRMTSEGSDFGSWEAGSYVLDDED 120
           T       TP    + +     L  TL   ERAYLMLRMTSEGSDFGSWEAGSYVLDDED
Sbjct: 61  TPSRHSSRTPFTNLTQVDADLALARTLQEQERAYLMLRMTSEGSDFGSWEAGSYVLDDED 120

Query: 121 GFGDPHDHTESDGXXXXXXXXXXXXXXXXXXXXXXXGGEHNNSNFELDPGNFSSDEAYAR 180
           GFGDPHDHTESDGXXXXXXXXXXXXXXXXXXXXXXXGGEHNNSNFELDPGNFSSDEAYAR
Sbjct: 121 GFGDPHDHTESDGXXXXXXXXXXXXXXXXXXXXXXXGGEHNNSNFELDPGNFSSDEAYAR 180

Query: 181 ALQDAEDREMAARLLALARLQDQDADDTDDQGENSQDTWEDVDPDELSYEELLALGEVVG 240
           ALQDAEDREMAARLLALARLQDQDADDTDDQGENSQDTWEDVDPDELSYEELLALGEVVG
Sbjct: 181 ALQDAEDREMAARLLALARLQDQDADDTDDQGENSQDTWEDVDPDELSYEELLALGEVVG 240

Query: 241 TESRGLSADTIASLPSINFKAGSDQTGSNDSCVICRLDFEDGETLTVLSCKHSYHSDCVT 300
           TESRGLSADTIASLPSINFKAGSDQTGSNDSCVICRLDFEDGETLTVLSCKHSYHSDCVT
Sbjct: 241 TESRGLSADTIASLPSINFKAGSDQTGSNDSCVICRLDFEDGETLTVLSCKHSYHSDCVT 300

Query: 301 NWLKINKICPVCSAEVSTATGSS 318
           NWLKINKICPVCSAEVSTATGSS
Sbjct: 301 NWLKINKICPVCSAEVSTATGSS 323

[Close]

BLAST of CsGy5G006000 vs. NCBI nr
Match: XP_008445883.1 (PREDICTED: E3 ubiquitin ligase BIG BROTHER-related [Cucumis melo])

HSP 1 Score: 408.3 bits (1048), Expect = 2.4e-110
Identity = 241/279 (86.38%), Postives = 245/279 (87.81%), Query Frame = 0


Query: 46  DPQNDTTGSDSTSLQT----LLATPLELPSLISPRSML--TLPSLERAYLMLRMTSEGSD 105
           DPQNDTTGSDSTSLQT       TP    + +     L  TL   ERAYLMLRMTSEGSD
Sbjct: 50  DPQNDTTGSDSTSLQTPSRHSSRTPFTNLTQVDADLALARTLQEQERAYLMLRMTSEGSD 109

Query: 106 FGSWEAGSYVLDDEDGFGDPHDHT-ESDGXXXXXXXXXXXXXXXXXXXXXXXGGEHNNSN 165
           FGSWEAGSYVLDDEDGFGDPHDHT     XXXXXXXXXXXXXXXXXX     GGEHNNSN
Sbjct: 110 FGSWEAGSYVLDDEDGFGDPHDHTXXXXXXXXXXXXXXXXXXXXXXXHAHEDGGEHNNSN 169

Query: 166 FELDPGNFSSDEAYARALQDAEDREMAARLLALARLQDQDADDTDDQGENSQDTWEDVDP 225
           FELDPGNFSSDEAYARALQDAEDREMAARLLALA LQD DADDTDDQGENSQDTWEDVDP
Sbjct: 170 FELDPGNFSSDEAYARALQDAEDREMAARLLALAGLQDHDADDTDDQGENSQDTWEDVDP 229

Query: 226 DELSYEELLALGEVVGTESRGLSADTIASLPSINFKAGSDQTGSNDSCVICRLDFEDGET 285
           DELSYEELLALGEVVGTESRGLSADTIASLPSINFKAGSDQTGSNDSCVICRLDFEDGET
Sbjct: 230 DELSYEELLALGEVVGTESRGLSADTIASLPSINFKAGSDQTGSNDSCVICRLDFEDGET 289

Query: 286 LTVLSCKHSYHSDCVTNWLKINKICPVCSAEVSTATGSS 318
           LTVLSCKHSYHSDC+TNWLKINK+CPVCSAEVSTATGSS
Sbjct: 290 LTVLSCKHSYHSDCITNWLKINKVCPVCSAEVSTATGSS 328

[Close]

BLAST of CsGy5G006000 vs. NCBI nr
Match: XP_022999294.1 (E3 ubiquitin ligase BIG BROTHER-related [Cucurbita maxima])

HSP 1 Score: 387.5 bits (994), Expect = 4.4e-104
Identity = 235/278 (84.53%), Postives = 241/278 (86.69%), Query Frame = 0


Query: 46  DPQNDTTGSDSTSLQT----LLATPLELPSLISPRSML--TLPSLERAYLMLRMTSEGSD 105
           DPQND TGSDSTSLQT       TP    + +     L  TL   ERAYLMLRMTSEGSD
Sbjct: 46  DPQNDPTGSDSTSLQTPSRHSSRTPFTNLTQVDADLALARTLQEQERAYLMLRMTSEGSD 105

Query: 106 FGSWEAGSYVLDDEDGFGDPHDHTESDGXXXXXXXXXXXXXXXXXXXXXXXGGEHNNSNF 165
           FGSWEAGSYVLDDEDGFGDPHDHT    XXXXXXXXXXXXXXXXXXXXXXX    NN NF
Sbjct: 106 FGSWEAGSYVLDDEDGFGDPHDHTXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXNNPNF 165

Query: 166 ELDPGNFSSDEAYARALQDAEDREMAARLLALARLQDQDADDTDDQGENSQDTWEDVDPD 225
           ELDPGNFSSDEAYARALQDAEDREMAARLLALA LQDQDADDTDDQGENSQDTWEDVDPD
Sbjct: 166 ELDPGNFSSDEAYARALQDAEDREMAARLLALAGLQDQDADDTDDQGENSQDTWEDVDPD 225

Query: 226 ELSYEELLALGEVVGTESRGLSADTIASLPSINFKAGSDQTGSNDSCVICRLDFEDGETL 285
           ELSYEELLALGEVVGTESRGLSADTIASLPSINFKAGS QTGS+DSCVICRLDFED ETL
Sbjct: 226 ELSYEELLALGEVVGTESRGLSADTIASLPSINFKAGSGQTGSSDSCVICRLDFEDNETL 285

Query: 286 TVLSCKHSYHSDCVTNWLKINKICPVCSAEVSTATGSS 318
           TVLSCKHSYHS+C+ NWLKINK+CPVCS EVSTATGSS
Sbjct: 286 TVLSCKHSYHSECINNWLKINKVCPVCSTEVSTATGSS 323

[Close]

BLAST of CsGy5G006000 vs. NCBI nr
Match: XP_023541119.1 (E3 ubiquitin ligase BIG BROTHER-related [Cucurbita pepo subsp. pepo])

HSP 1 Score: 387.1 bits (993), Expect = 5.7e-104
Identity = 235/278 (84.53%), Postives = 241/278 (86.69%), Query Frame = 0


Query: 46  DPQNDTTGSDSTSLQT----LLATPLELPSLISPRSML--TLPSLERAYLMLRMTSEGSD 105
           DPQND TGSDSTSLQT       TP    + +     L  TL   ERAYLMLRMTSEGSD
Sbjct: 46  DPQNDPTGSDSTSLQTPSRHSSRTPFTNLTQVDADLALARTLQEQERAYLMLRMTSEGSD 105

Query: 106 FGSWEAGSYVLDDEDGFGDPHDHTESDGXXXXXXXXXXXXXXXXXXXXXXXGGEHNNSNF 165
           FGSWEAGSYVLDDEDGFGDPHDHT    XXXXXXXXXXXXXXXXXXXXXXX    NN NF
Sbjct: 106 FGSWEAGSYVLDDEDGFGDPHDHTXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXNNPNF 165

Query: 166 ELDPGNFSSDEAYARALQDAEDREMAARLLALARLQDQDADDTDDQGENSQDTWEDVDPD 225
           ELDPGNFSSDEAYARALQDAEDREMAARLLALA LQDQDADDTDDQGENSQDTWEDVDPD
Sbjct: 166 ELDPGNFSSDEAYARALQDAEDREMAARLLALAGLQDQDADDTDDQGENSQDTWEDVDPD 225

Query: 226 ELSYEELLALGEVVGTESRGLSADTIASLPSINFKAGSDQTGSNDSCVICRLDFEDGETL 285
           ELSYEELLALGEVVGTESRGLSADTIASLPSINFKAGS QTGS+DSCVICRLDFED ETL
Sbjct: 226 ELSYEELLALGEVVGTESRGLSADTIASLPSINFKAGSGQTGSSDSCVICRLDFEDDETL 285

Query: 286 TVLSCKHSYHSDCVTNWLKINKICPVCSAEVSTATGSS 318
           TVLSCKHSYHS+C+ NWLKINK+CPVCS EVSTATGSS
Sbjct: 286 TVLSCKHSYHSECINNWLKINKVCPVCSTEVSTATGSS 323

[Close]

BLAST of CsGy5G006000 vs. NCBI nr
Match: XP_022957075.1 (E3 ubiquitin ligase BIG BROTHER-related [Cucurbita moschata])

HSP 1 Score: 385.2 bits (988), Expect = 2.2e-103
Identity = 234/278 (84.17%), Postives = 240/278 (86.33%), Query Frame = 0


Query: 46  DPQNDTTGSDSTSLQT----LLATPLELPSLISPRSML--TLPSLERAYLMLRMTSEGSD 105
           DPQND TGSDS SLQT       TP    + +     L  TL   ERAYLMLRMTSEGSD
Sbjct: 46  DPQNDPTGSDSASLQTPSRHSSRTPFTNLTQVDADLALARTLQEQERAYLMLRMTSEGSD 105

Query: 106 FGSWEAGSYVLDDEDGFGDPHDHTESDGXXXXXXXXXXXXXXXXXXXXXXXGGEHNNSNF 165
           FGSWEAGSYVLDDEDGFGDPHDHT    XXXXXXXXXXXXXXXXXXXXXXX    NN NF
Sbjct: 106 FGSWEAGSYVLDDEDGFGDPHDHTXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXNNPNF 165

Query: 166 ELDPGNFSSDEAYARALQDAEDREMAARLLALARLQDQDADDTDDQGENSQDTWEDVDPD 225
           ELDPGNFSSDEAYARALQDAEDREMAARLLALA LQDQDADDTDDQGENSQDTWEDVDPD
Sbjct: 166 ELDPGNFSSDEAYARALQDAEDREMAARLLALAGLQDQDADDTDDQGENSQDTWEDVDPD 225

Query: 226 ELSYEELLALGEVVGTESRGLSADTIASLPSINFKAGSDQTGSNDSCVICRLDFEDGETL 285
           ELSYEELLALGEVVGTESRGLSADTIASLPSINFKAGS QTGS+DSCVICRLDFED ETL
Sbjct: 226 ELSYEELLALGEVVGTESRGLSADTIASLPSINFKAGSGQTGSSDSCVICRLDFEDDETL 285

Query: 286 TVLSCKHSYHSDCVTNWLKINKICPVCSAEVSTATGSS 318
           TVLSCKHSYHS+C+ NWLKINK+CPVCS EVSTATGSS
Sbjct: 286 TVLSCKHSYHSECINNWLKINKVCPVCSTEVSTATGSS 323

[Close]

BLAST of CsGy5G006000 vs. TAIR10
Match: AT3G19910.1 (RING/U-box superfamily protein)

HSP 1 Score: 229.2 bits (583), Expect = 3.6e-60
Identity = 147/235 (62.55%), Postives = 178/235 (75.74%), Query Frame = 0


Query: 80  TLPSLERAYLMLRMTSEGSDFGSWEAGSYVLDDEDGFGDPHDHTESDGXXXXXXXXXXXX 139
           TL   ERAY+ML M SE SD+GSWE GSYV  D               XXXXXXXXXXXX
Sbjct: 103 TLQEQERAYMMLTMNSEISDYGSWETGSYVY-DXXXXXXXXXXXXXXXXXXXXXXXXXXX 162

Query: 140 XXXXXXXXXXXGGEHNNSNFELDPGNFSSDEAYARALQDAEDREMAARLLALARLQDQDA 199
           XXXXXXXXXXX         +++   ++ DEAYARALQ+AE+R+MAARL AL+ L ++  
Sbjct: 163 XXXXXXXXXXXXXXXXXXXXDIEEVAYTDDEAYARALQEAEERDMAARLSALSGLANRVV 222

Query: 200 DDTDDQGENSQDTWEDVDPDELSYEELLALGEVVGTESRGLSADTIASLPSINFKAGSDQ 259
           +D +D+   SQD W+++DPDELSYEELLALG++VGTESRGLSADTIASLPS  +K G +Q
Sbjct: 223 EDLEDESHTSQDAWDEMDPDELSYEELLALGDIVGTESRGLSADTIASLPSKRYKEGDNQ 282

Query: 260 TGSNDSCVICRLDFEDGETLTVLSCKHSYHSDCVTNWLKINKICPVCSAEVSTAT 315
            G+N+SCVICRLD+ED E L +L CKHSYHS+C+ NWLKINK+CPVCSAEVST+T
Sbjct: 283 NGTNESCVICRLDYEDDEDLILLPCKHSYHSECINNWLKINKVCPVCSAEVSTST 336

[Close]

BLAST of CsGy5G006000 vs. TAIR10
Match: AT3G63530.1 (RING/U-box superfamily protein)

HSP 1 Score: 111.7 bits (278), Expect = 8.4e-25
Identity = 66/160 (41.25%), Postives = 94/160 (58.75%), Query Frame = 0


Query: 154 HNNSNFELDPGNFSSDEAYARALQDAEDREMAARLLALARLQDQDADDTDDQGENSQDTW 213
           H   N   DP N       AR++Q  +  E +     +A   D D         + Q +W
Sbjct: 96  HPMVNVADDPEN-----TVARSVQIGDTDEHSEAEECIANEHDPD---------SPQVSW 155

Query: 214 -EDVDPDELSYEELLALGEVVGTESRGLSADTIASLPSINFKAGS--DQTGSNDSCVICR 273
            +D+DPD ++YEEL+ LGE VGTESRGLS + I +LP+  +K GS   +  + + CVIC+
Sbjct: 156 QDDIDPDTMTYEELVELGEAVGTESRGLSQELIETLPTKKYKFGSIFSRKRAGERCVICQ 215

Query: 274 LDFEDGETLTVLSCKHSYHSDCVTNWLKINKICPVCSAEV 311
           L ++ GE    L CKH YHS+C++ WL INK+CPVC++EV
Sbjct: 216 LKYKIGERQMNLPCKHVYHSECISKWLSINKVCPVCNSEV 241

[Close]

BLAST of CsGy5G006000 vs. TAIR10
Match: AT3G47180.1 (RING/U-box superfamily protein)

HSP 1 Score: 96.7 bits (239), Expect = 2.8e-20
Identity = 48/121 (39.67%), Postives = 75/121 (61.98%), Query Frame = 0


Query: 194 LQDQDADDTDDQGENSQDTWEDVDPDELSYEELLALGEVVGTESRGLSADTIASLPSINF 253
           L+DQ+++               +DPD+LSYEEL+ALG+ +G E+RGL+   I++  + + 
Sbjct: 90  LEDQESNSNLXXXXXXXXXXXXIDPDQLSYEELIALGDFIGVENRGLTPIEISTCLNAST 149

Query: 254 KAGSDQTGSNDSCVICRLDFEDGETLTVL-SCKHSYHSDCVTNWLKINKICPVCSAEVST 313
              S      D CV+C+++FE+ E+L VL  C H YHS+C+T WL+  KICP+C +E S 
Sbjct: 150 YVFSHNKNEIDRCVVCQMEFEERESLVVLRPCDHPYHSECITKWLETKKICPICCSEPSV 209

[Close]

BLAST of CsGy5G006000 vs. TAIR10
Match: AT5G52140.1 (RING/U-box superfamily protein)

HSP 1 Score: 83.2 bits (204), Expect = 3.2e-16
Identity = 39/107 (36.45%), Postives = 60/107 (56.07%), Query Frame = 0


Query: 214 EDVDPDELSYEELLALGEVVGTESRGLSADTIASLPSINFKAGSDQ----------TGSN 273
           E+ DP+ ++YEEL  LG+ VG   +GLS + I+ L +  +   +               +
Sbjct: 172 ENNDPENMTYEELTELGDSVGDVGKGLSQERISRLRTHKYGTKTKSWYCLHMKKKFVADD 231

Query: 274 DSCVICRLDFEDGETLTVLSCKHSYHSDCVTNWLKINKICPVCSAEV 311
             C IC +++  G+ +T L CKH YH DC++ WLK NK+C +C AEV
Sbjct: 232 SQCSICLMEYAKGDKITTLPCKHIYHKDCISQWLKQNKVCCICKAEV 278

[Close]

BLAST of CsGy5G006000 vs. TAIR10
Match: AT3G15070.1 (RING/U-box superfamily protein)

HSP 1 Score: 82.8 bits (203), Expect = 4.2e-16
Identity = 36/100 (36.00%), Postives = 59/100 (59.00%), Query Frame = 0


Query: 216 VDPDELSYEELLALGEVVGTESRGLSADTIASL------PSINFKAGSDQTGSNDSCVIC 275
           +D +++SYEELLAL + +GT   GLS++ +  L        IN + G       DSC IC
Sbjct: 372 LDIEDMSYEELLALSDQIGTVKTGLSSEDVKELLKRRTSTRINLEEGPSTDLETDSCTIC 431

Query: 276 RLDFEDGETLTVLSCKHSYHSDCVTNWLKINKICPVCSAE 310
           + ++++ + +  L C H YH++C+  WL I  +CP+C +E
Sbjct: 432 QENYKNEDKIATLDCMHKYHAECLKKWLVIKNVCPICKSE 471

[Close]

BLAST of CsGy5G006000 vs. Swiss-Prot
Match: sp|Q9LT17|BBR_ARATH (E3 ubiquitin ligase BIG BROTHER-related OS=Arabidopsis thaliana OX=3702 GN=BBR PE=2 SV=1)

HSP 1 Score: 229.2 bits (583), Expect = 6.5e-59
Identity = 147/235 (62.55%), Postives = 178/235 (75.74%), Query Frame = 0


Query: 80  TLPSLERAYLMLRMTSEGSDFGSWEAGSYVLDDEDGFGDPHDHTESDGXXXXXXXXXXXX 139
           TL   ERAY+ML M SE SD+GSWE GSYV  D               XXXXXXXXXXXX
Sbjct: 103 TLQEQERAYMMLTMNSEISDYGSWETGSYVY-DXXXXXXXXXXXXXXXXXXXXXXXXXXX 162

Query: 140 XXXXXXXXXXXGGEHNNSNFELDPGNFSSDEAYARALQDAEDREMAARLLALARLQDQDA 199
           XXXXXXXXXXX         +++   ++ DEAYARALQ+AE+R+MAARL AL+ L ++  
Sbjct: 163 XXXXXXXXXXXXXXXXXXXXDIEEVAYTDDEAYARALQEAEERDMAARLSALSGLANRVV 222

Query: 200 DDTDDQGENSQDTWEDVDPDELSYEELLALGEVVGTESRGLSADTIASLPSINFKAGSDQ 259
           +D +D+   SQD W+++DPDELSYEELLALG++VGTESRGLSADTIASLPS  +K G +Q
Sbjct: 223 EDLEDESHTSQDAWDEMDPDELSYEELLALGDIVGTESRGLSADTIASLPSKRYKEGDNQ 282

Query: 260 TGSNDSCVICRLDFEDGETLTVLSCKHSYHSDCVTNWLKINKICPVCSAEVSTAT 315
            G+N+SCVICRLD+ED E L +L CKHSYHS+C+ NWLKINK+CPVCSAEVST+T
Sbjct: 283 NGTNESCVICRLDYEDDEDLILLPCKHSYHSECINNWLKINKVCPVCSAEVSTST 336

[Close]

BLAST of CsGy5G006000 vs. Swiss-Prot
Match: sp|Q8L649|BB_ARATH (E3 ubiquitin-protein ligase BIG BROTHER OS=Arabidopsis thaliana OX=3702 GN=BB PE=1 SV=1)

HSP 1 Score: 111.7 bits (278), Expect = 1.5e-23
Identity = 66/160 (41.25%), Postives = 94/160 (58.75%), Query Frame = 0


Query: 154 HNNSNFELDPGNFSSDEAYARALQDAEDREMAARLLALARLQDQDADDTDDQGENSQDTW 213
           H   N   DP N       AR++Q  +  E +     +A   D D         + Q +W
Sbjct: 96  HPMVNVADDPEN-----TVARSVQIGDTDEHSEAEECIANEHDPD---------SPQVSW 155

Query: 214 -EDVDPDELSYEELLALGEVVGTESRGLSADTIASLPSINFKAGS--DQTGSNDSCVICR 273
            +D+DPD ++YEEL+ LGE VGTESRGLS + I +LP+  +K GS   +  + + CVIC+
Sbjct: 156 QDDIDPDTMTYEELVELGEAVGTESRGLSQELIETLPTKKYKFGSIFSRKRAGERCVICQ 215

Query: 274 LDFEDGETLTVLSCKHSYHSDCVTNWLKINKICPVCSAEV 311
           L ++ GE    L CKH YHS+C++ WL INK+CPVC++EV
Sbjct: 216 LKYKIGERQMNLPCKHVYHSECISKWLSINKVCPVCNSEV 241

[Close]

BLAST of CsGy5G006000 vs. Swiss-Prot
Match: sp|Q9H0F5|RNF38_HUMAN (E3 ubiquitin-protein ligase RNF38 OS=Homo sapiens OX=9606 GN=RNF38 PE=1 SV=4)

HSP 1 Score: 79.0 bits (193), Expect = 1.1e-13
Identity = 42/99 (42.42%), Postives = 57/99 (57.58%), Query Frame = 0


Query: 215 DVDPDEL-SYEELLALGEVVG-TESRGLSADTIASLPSINFKAGSDQTGSNDSCVICRLD 274
           DV+  E+ +YE LL L E +G  + RGL+   I  LPS  F   + Q+     CV+C  D
Sbjct: 411 DVEDGEVENYEALLNLAERLGEAKPRGLTKADIEQLPSYRFNPNNHQS-EQTLCVVCMCD 470

Query: 275 FEDGETLTVLSCKHSYHSDCVTNWLKINKICPVCSAEVS 312
           FE  + L VL C H +H+ CV  WLK N+ CP+C A+ S
Sbjct: 471 FESRQLLRVLPCNHEFHAKCVDKWLKANRTCPICRADAS 508

[Close]

BLAST of CsGy5G006000 vs. Swiss-Prot
Match: sp|Q7L0R7|RNF44_HUMAN (RING finger protein 44 OS=Homo sapiens OX=9606 GN=RNF44 PE=2 SV=1)

HSP 1 Score: 79.0 bits (193), Expect = 1.1e-13
Identity = 44/99 (44.44%), Postives = 57/99 (57.58%), Query Frame = 0


Query: 215 DVDPDEL-SYEELLALGEVVG-TESRGLSADTIASLPSINFKAGSDQTGSNDSCVICRLD 274
           DVD  E+ +YE LL L E +G  + RGL+   I  LPS  F   S Q+     CV+C  D
Sbjct: 328 DVDDVEMENYEALLNLAERLGDAKPRGLTKADIEQLPSYRFNPDSHQS-EQTLCVVCFSD 387

Query: 275 FEDGETLTVLSCKHSYHSDCVTNWLKINKICPVCSAEVS 312
           FE  + L VL C H +H+ CV  WLK N+ CP+C A+ S
Sbjct: 388 FEARQLLRVLPCNHEFHTKCVDKWLKANRTCPICRADAS 425

[Close]

BLAST of CsGy5G006000 vs. Swiss-Prot
Match: sp|Q3UHJ8|RNF44_MOUSE (RING finger protein 44 OS=Mus musculus OX=10090 GN=Rnf44 PE=2 SV=1)

HSP 1 Score: 78.6 bits (192), Expect = 1.4e-13
Identity = 44/99 (44.44%), Postives = 57/99 (57.58%), Query Frame = 0


Query: 215 DVDPDEL-SYEELLALGEVVG-TESRGLSADTIASLPSINFKAGSDQTGSNDSCVICRLD 274
           DVD  E+ +YE LL L E +G  + RGL+   I  LPS  F   S Q+     CV+C  D
Sbjct: 303 DVDDVEMENYEALLNLAERLGDAKPRGLTKADIEQLPSYRFNPDSHQS-EQTLCVVCFSD 362

Query: 275 FEDGETLTVLSCKHSYHSDCVTNWLKINKICPVCSAEVS 312
           FE  + L VL C H +H+ CV  WLK N+ CP+C A+ S
Sbjct: 363 FEVRQLLRVLPCNHEFHAKCVDKWLKANRTCPICRADAS 400

[Close]

BLAST of CsGy5G006000 vs. TrEMBL
Match: tr|A0A0A0KL96|A0A0A0KL96_CUCSA (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_5G175690 PE=4 SV=1)

HSP 1 Score: 429.5 bits (1103), Expect = 6.6e-117
Identity = 299/323 (92.57%), Postives = 301/323 (93.19%), Query Frame = 0


Query: 1   MENEAATTXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXDPQNDTTGSDSTSLQ 60
           MENEAATTXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXDPQNDTTGSDSTSLQ
Sbjct: 1   MENEAATTXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXDPQNDTTGSDSTSLQ 60

Query: 61  T----LLATPLELPSLISPRSML--TLPSLERAYLMLRMTSEGSDFGSWEAGSYVLDDED 120
           T       TP    + +     L  TL   ERAYLMLRMTSEGSDFGSWEAGSYVLDDED
Sbjct: 61  TPSRHSSRTPFTNLTQVDADLALARTLQEQERAYLMLRMTSEGSDFGSWEAGSYVLDDED 120

Query: 121 GFGDPHDHTESDGXXXXXXXXXXXXXXXXXXXXXXXGGEHNNSNFELDPGNFSSDEAYAR 180
           GFGDPHDHTESDGXXXXXXXXXXXXXXXXXXXXXXXGGEHNNSNFELDPGNFSSDEAYAR
Sbjct: 121 GFGDPHDHTESDGXXXXXXXXXXXXXXXXXXXXXXXGGEHNNSNFELDPGNFSSDEAYAR 180

Query: 181 ALQDAEDREMAARLLALARLQDQDADDTDDQGENSQDTWEDVDPDELSYEELLALGEVVG 240
           ALQDAEDREMAARLLALARLQDQDADDTDDQGENSQDTWEDVDPDELSYEELLALGEVVG
Sbjct: 181 ALQDAEDREMAARLLALARLQDQDADDTDDQGENSQDTWEDVDPDELSYEELLALGEVVG 240

Query: 241 TESRGLSADTIASLPSINFKAGSDQTGSNDSCVICRLDFEDGETLTVLSCKHSYHSDCVT 300
           TESRGLSADTIASLPSINFKAGSDQTGSNDSCVICRLDFEDGETLTVLSCKHSYHSDCVT
Sbjct: 241 TESRGLSADTIASLPSINFKAGSDQTGSNDSCVICRLDFEDGETLTVLSCKHSYHSDCVT 300

Query: 301 NWLKINKICPVCSAEVSTATGSS 318
           NWLKINKICPVCSAEVSTATGSS
Sbjct: 301 NWLKINKICPVCSAEVSTATGSS 323

[Close]

BLAST of CsGy5G006000 vs. TrEMBL
Match: tr|A0A1S3BD86|A0A1S3BD86_CUCME (E3 ubiquitin ligase BIG BROTHER-related OS=Cucumis melo OX=3656 GN=LOC103488769 PE=4 SV=1)

HSP 1 Score: 408.3 bits (1048), Expect = 1.6e-110
Identity = 241/279 (86.38%), Postives = 245/279 (87.81%), Query Frame = 0


Query: 46  DPQNDTTGSDSTSLQT----LLATPLELPSLISPRSML--TLPSLERAYLMLRMTSEGSD 105
           DPQNDTTGSDSTSLQT       TP    + +     L  TL   ERAYLMLRMTSEGSD
Sbjct: 50  DPQNDTTGSDSTSLQTPSRHSSRTPFTNLTQVDADLALARTLQEQERAYLMLRMTSEGSD 109

Query: 106 FGSWEAGSYVLDDEDGFGDPHDHT-ESDGXXXXXXXXXXXXXXXXXXXXXXXGGEHNNSN 165
           FGSWEAGSYVLDDEDGFGDPHDHT     XXXXXXXXXXXXXXXXXX     GGEHNNSN
Sbjct: 110 FGSWEAGSYVLDDEDGFGDPHDHTXXXXXXXXXXXXXXXXXXXXXXXHAHEDGGEHNNSN 169

Query: 166 FELDPGNFSSDEAYARALQDAEDREMAARLLALARLQDQDADDTDDQGENSQDTWEDVDP 225
           FELDPGNFSSDEAYARALQDAEDREMAARLLALA LQD DADDTDDQGENSQDTWEDVDP
Sbjct: 170 FELDPGNFSSDEAYARALQDAEDREMAARLLALAGLQDHDADDTDDQGENSQDTWEDVDP 229

Query: 226 DELSYEELLALGEVVGTESRGLSADTIASLPSINFKAGSDQTGSNDSCVICRLDFEDGET 285
           DELSYEELLALGEVVGTESRGLSADTIASLPSINFKAGSDQTGSNDSCVICRLDFEDGET
Sbjct: 230 DELSYEELLALGEVVGTESRGLSADTIASLPSINFKAGSDQTGSNDSCVICRLDFEDGET 289

Query: 286 LTVLSCKHSYHSDCVTNWLKINKICPVCSAEVSTATGSS 318
           LTVLSCKHSYHSDC+TNWLKINK+CPVCSAEVSTATGSS
Sbjct: 290 LTVLSCKHSYHSDCITNWLKINKVCPVCSAEVSTATGSS 328

[Close]

BLAST of CsGy5G006000 vs. TrEMBL
Match: tr|A0A2P6RHS9|A0A2P6RHS9_ROSCH (Putative transcription factor C2H2 family OS=Rosa chinensis OX=74649 GN=RchiOBHm_Chr2g0084221 PE=4 SV=1)

HSP 1 Score: 295.8 bits (756), Expect = 1.1e-76
Identity = 182/237 (76.79%), Postives = 202/237 (85.23%), Query Frame = 0


Query: 80  TLPSLERAYLMLRMTSEGSDFGSWEAGSYVLDDEDGFGDPHDHTESDGXXXXXXXXXXXX 139
           TL   ERAY+MLRM +EGSD+GSWEAGSYV DDED F D  D      XXXXXXXXXXXX
Sbjct: 79  TLQEQERAYMMLRMNNEGSDYGSWEAGSYVHDDEDDFHDDTDGXXXXXXXXXXXXXXXXX 138

Query: 140 XXXXXXXXXXXGGEHNNSNFELDPGNFSSDEAYARALQDAEDREMAARLLALARLQDQDA 199
           XXXXXXXXXXX  +HN S    DP  FSSDEAYARALQDAEDR+MAARL+ALA + D++A
Sbjct: 139 XXXXXXXXXXXXXDHNPS-VVYDPTVFSSDEAYARALQDAEDRDMAARLMALA-IDDREA 198

Query: 200 DDTDDQGENSQDTWEDVDPDELSYEELLALGEVVGTESRGLSADTIASLPSINFKAGSDQ 259
           +DT+DQG NSQD WE+VDPDELSYEELLALGEVVGTESRGLSADTIASLPS+++K GSDQ
Sbjct: 199 EDTEDQGGNSQDAWEEVDPDELSYEELLALGEVVGTESRGLSADTIASLPSVSYKMGSDQ 258

Query: 260 TGSNDSCVICRLDFEDGETLTVLSCKHSYHSDCVTNWLKINKICPVCSAEVSTATGS 317
            GSN+SCVICRLD+EDGE LTVLSCKHSYHSDC+ NWL INK+CPVCSAEVST+  S
Sbjct: 259 NGSNESCVICRLDYEDGENLTVLSCKHSYHSDCINNWLTINKVCPVCSAEVSTSGNS 313

[Close]

BLAST of CsGy5G006000 vs. TrEMBL
Match: tr|A0A2C9V061|A0A2C9V061_MANES (Uncharacterized protein OS=Manihot esculenta OX=3983 GN=MANES_11G102000 PE=4 SV=1)

HSP 1 Score: 295.4 bits (755), Expect = 1.5e-76
Identity = 167/237 (70.46%), Postives = 190/237 (80.17%), Query Frame = 0


Query: 80  TLPSLERAYLMLRMTSEGSDFGSWEAGSYVLDDEDGFGDP---HDHTESDGXXXXXXXXX 139
           TL   ERAY+MLR+ ++GSD+GSWEAGSY+ DDED FGDP           XXXXXXXXX
Sbjct: 67  TLQEQERAYMMLRLNNDGSDYGSWEAGSYLHDDEDDFGDPDVXXXXXXXXXXXXXXXXXX 126

Query: 140 XXXXXXXXXXXXXXGGEHNNSNFELDPGNFSSDEAYARALQDAEDREMAARLLALARLQD 199
           XXXX           G  N     LDP  FSSDEAYARALQDAE+REMAARLLALA + D
Sbjct: 127 XXXXDAFDAHAHDDAGVDNIPGIHLDPSMFSSDEAYARALQDAEEREMAARLLALAGIND 186

Query: 200 QDADDTDDQGENSQDTWEDVDPDELSYEELLALGEVVGTESRGLSADTIASLPSINFKAG 259
           ++ +D++D G NSQD WE+VDPDELSYEELLALGEVVGTESRGLSADTIASLPS+N+KAG
Sbjct: 187 REVEDSEDHGGNSQDAWEEVDPDELSYEELLALGEVVGTESRGLSADTIASLPSVNYKAG 246

Query: 260 SDQTGSNDSCVICRLDFEDGETLTVLSCKHSYHSDCVTNWLKINKICPVCSAEVSTA 314
           S Q GSNDSCVICRLD++DGETLTVLSCKHSYHS+C+ +WLKINK+CPVCS EVST+
Sbjct: 247 SSQNGSNDSCVICRLDYDDGETLTVLSCKHSYHSECINDWLKINKVCPVCSTEVSTS 303

[Close]

BLAST of CsGy5G006000 vs. TrEMBL
Match: tr|A0A2I4ED69|A0A2I4ED69_9ROSI (E3 ubiquitin ligase BIG BROTHER-related OS=Juglans regia OX=51240 GN=LOC108988518 PE=4 SV=1)

HSP 1 Score: 293.5 bits (750), Expect = 5.7e-76
Identity = 179/248 (72.18%), Postives = 199/248 (80.24%), Query Frame = 0


Query: 81  LPSLERAYLMLRMTSEGSDFGSWEAGSYVLDDEDGFGDPHDHTESDGXXXXXXXXXXXXX 140
           L   ERAY+MLRM +EGSD+GSWE GSYVLDDE+ F           XXXXXXXXXXXXX
Sbjct: 82  LQEQERAYMMLRMNNEGSDYGSWEGGSYVLDDEENFNXXXXXXXXXXXXXXXXXXXXXXX 141

Query: 141 XXXXXXXXXXG------------GEHNNSNFELDPGNFSSDEAYARALQDAEDREMAARL 200
           XXXXXXXXXX             GE+NN + E DP  FSSDEAYARALQDAEDREMAARL
Sbjct: 142 XXXXXXXXXXXXXXFDVHAHDEPGENNNPSIEFDPAAFSSDEAYARALQDAEDREMAARL 201

Query: 201 LALARLQDQDADDTDDQGENSQDTWEDVDPDELSYEELLALGEVVGTESRGLSADTIASL 260
           LALA + D +A+D +D G NSQDTWE+VDPDELSYEEL+AL EVVGTESRGLSADT+ASL
Sbjct: 202 LALAGINDGEAEDIEDHGGNSQDTWEEVDPDELSYEELIALSEVVGTESRGLSADTLASL 261

Query: 261 PSINFKAGSDQTGSNDSCVICRLDFEDGETLTVLSCKHSYHSDCVTNWLKINKICPVCSA 317
           PS+N+K+GS Q GSNDSCVICRLD+EDGETLTVLSCKHSYHS+C+ NWLKINK+CPVCSA
Sbjct: 262 PSVNYKSGSSQNGSNDSCVICRLDYEDGETLTVLSCKHSYHSECINNWLKINKVCPVCSA 321

The following BLAST results are available for this feature:

BLAST of CsGy5G006000 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_004143619.1	1.0e-116	92.57	PREDICTED: E3 ubiquitin ligase BIG BROTHER-related [Cucumis sativus] >KGN50445.1...	[more]
XP_008445883.1	2.4e-110	86.38	PREDICTED: E3 ubiquitin ligase BIG BROTHER-related [Cucumis melo]	[more]
XP_022999294.1	4.4e-104	84.53	E3 ubiquitin ligase BIG BROTHER-related [Cucurbita maxima]	[more]
XP_023541119.1	5.7e-104	84.53	E3 ubiquitin ligase BIG BROTHER-related [Cucurbita pepo subsp. pepo]	[more]
XP_022957075.1	2.2e-103	84.17	E3 ubiquitin ligase BIG BROTHER-related [Cucurbita moschata]	[more]

BLAST of CsGy5G006000 vs. TAIR10


Match Name	E-value	Identity	Description
AT3G19910.1	3.6e-60	62.55	RING/U-box superfamily protein	[more]
AT3G63530.1	8.4e-25	41.25	RING/U-box superfamily protein	[more]
AT3G47180.1	2.8e-20	39.67	RING/U-box superfamily protein	[more]
AT5G52140.1	3.2e-16	36.45	RING/U-box superfamily protein	[more]
AT3G15070.1	4.2e-16	36.00	RING/U-box superfamily protein	[more]

BLAST of CsGy5G006000 vs. Swiss-Prot


Match Name	E-value	Identity	Description
sp\|Q9LT17\|BBR_ARATH	6.5e-59	62.55	E3 ubiquitin ligase BIG BROTHER-related OS=Arabidopsis thaliana OX=3702 GN=BBR P...	[more]
sp\|Q8L649\|BB_ARATH	1.5e-23	41.25	E3 ubiquitin-protein ligase BIG BROTHER OS=Arabidopsis thaliana OX=3702 GN=BB PE...	[more]
sp\|Q9H0F5\|RNF38_HUMAN	1.1e-13	42.42	E3 ubiquitin-protein ligase RNF38 OS=Homo sapiens OX=9606 GN=RNF38 PE=1 SV=4	[more]
sp\|Q7L0R7\|RNF44_HUMAN	1.1e-13	44.44	RING finger protein 44 OS=Homo sapiens OX=9606 GN=RNF44 PE=2 SV=1	[more]
sp\|Q3UHJ8\|RNF44_MOUSE	1.4e-13	44.44	RING finger protein 44 OS=Mus musculus OX=10090 GN=Rnf44 PE=2 SV=1	[more]

BLAST of CsGy5G006000 vs. TrEMBL


Match Name	E-value	Identity	Description
tr\|A0A0A0KL96\|A0A0A0KL96_CUCSA	6.6e-117	92.57	Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_5G175690 PE=4 SV=1	[more]
tr\|A0A1S3BD86\|A0A1S3BD86_CUCME	1.6e-110	86.38	E3 ubiquitin ligase BIG BROTHER-related OS=Cucumis melo OX=3656 GN=LOC103488769 ...	[more]
tr\|A0A2P6RHS9\|A0A2P6RHS9_ROSCH	1.1e-76	76.79	Putative transcription factor C2H2 family OS=Rosa chinensis OX=74649 GN=RchiOBHm...	[more]
tr\|A0A2C9V061\|A0A2C9V061_MANES	1.5e-76	70.46	Uncharacterized protein OS=Manihot esculenta OX=3983 GN=MANES_11G102000 PE=4 SV=...	[more]
tr\|A0A2I4ED69\|A0A2I4ED69_9ROSI	5.7e-76	72.18	E3 ubiquitin ligase BIG BROTHER-related OS=Juglans regia OX=51240 GN=LOC10898851...	[more]

Annotated Terms

The following terms have been associated with this gene:

Vocabulary: **INTERPRO**
Term	Definition
IPR013083	Znf_RING/FYVE/PHD
IPR001841	Znf_RING

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0043161	proteasome-mediated ubiquitin-dependent protein catabolic process
biological_process	GO:0016567	protein ubiquitination
biological_process	GO:0008150	biological_process
cellular_component	GO:0005575	cellular_component
molecular_function	GO:0016874	ligase activity
molecular_function	GO:0061630	ubiquitin protein ligase activity
molecular_function	GO:0003674	molecular_function

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
CsGy5G006000.1	CsGy5G006000.1	mRNA

InterPro

Analysis Name: InterPro Annotations of cucumber Gy14 genome (v2)
Date Performed: 2018-09-25


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR001841	Zinc finger, RING-type	SMART	SM00184	ring_2	coord: 266..306 e-value: 2.7E-5 score: 33.6
IPR001841	Zinc finger, RING-type	PFAM	PF13639	zf-RING_2	coord: 264..306 e-value: 6.9E-12 score: 45.4
IPR001841	Zinc finger, RING-type	PROSITE	PS50089	ZF_RING_2	coord: 266..307 score: 11.619
IPR013083	Zinc finger, RING/FYVE/PHD-type	GENE3D	G3DSA:3.30.40.10		coord: 231..313 e-value: 1.3E-20 score: 74.8
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 200..218
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 195..218
None	No IPR available	PANTHER	PTHR14155:SF166	E3 UBIQUITIN LIGASE BIG BROTHER-RELATED	coord: 1..314
None	No IPR available	PANTHER	PTHR14155	RING FINGER DOMAIN-CONTAINING	coord: 1..314
None	No IPR available	CDD	cd16454	RING-H2_PA-TM-RING	coord: 266..306 e-value: 1.09669E-16 score: 71.5641
None	No IPR available	SUPERFAMILY	SSF57850	RING/U-box	coord: 259..313

Synteny

The following gene(s) are orthologous to this gene:


Gene	Orthologue	Organism	Block
CsGy5G006000	Cla020053	Watermelon (97103) v1	cgybwmB401
CsGy5G006000	Csa5G175690	Cucumber (Chinese Long) v2	cgybcuB224
CsGy5G006000	MELO3C011752	Melon (DHL92) v3.5.1	cgybmeB310
CsGy5G006000	ClCG02G014100	Watermelon (Charleston Gray)	cgybwcgB347
CsGy5G006000	CSPI05G08610	Wild cucumber (PI 183967)	cgybcpiB226
CsGy5G006000	CmaCh04G012550	Cucurbita maxima (Rimu)	cgybcmaB673
CsGy5G006000	CmaCh04G002850	Cucurbita maxima (Rimu)	cgybcmaB674
CsGy5G006000	CmoCh04G013290	Cucurbita moschata (Rifu)	cgybcmoB651
CsGy5G006000	CmoCh04G002930	Cucurbita moschata (Rifu)	cgybcmoB652
CsGy5G006000	Lsi04G007940	Bottle gourd (USVL1VR-Ls)	cgyblsiB331
CsGy5G006000	Cp4.1LG01g04320	Cucurbita pepo (Zucchini)	cgybcpeB647
CsGy5G006000	Cp4.1LG01g10200	Cucurbita pepo (Zucchini)	cgybcpeB646
CsGy5G006000	MELO3C011752.2	Melon (DHL92) v3.6.1	cgybmedB310
CsGy5G006000	CsaV3_5G006070	Cucumber (Chinese Long) v3	cgybcucB232
CsGy5G006000	Cla97C02G039830	Watermelon (97103) v2	cgybwmbB351
CsGy5G006000	Bhi07G000924	Wax gourd	cgybwgoB480
CsGy5G006000	Carg02052	Silver-seed gourd	carcgybB0832
CsGy5G006000	Carg25686	Silver-seed gourd	carcgybB0841

The following gene(s) are paralogous to this gene:

None

The following block(s) are covering this gene:

None