Cp4.1LG01g04320 (gene) Cucurbita pepo (Zucchini)

Overview
NameCp4.1LG01g04320
Typegene
OrganismCucurbita pepo (Cucurbita pepo (Zucchini))
DescriptionRING-finger ubiquitin ligase
LocationCp4.1LG01 : 1406494 .. 1412638 (+)
Genome Viewer
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: CDSthree_prime_UTR
Hold the cursor over a type above to highlight its positions in the sequence below.
AACGAAGCCACCACTAACGCCACCAAACTTGGTTTTGATGGAGTCAAGCCACCGCCCACCACCGCCACCACCGCCTCCTCCGACCTTGAACACAACCCTAATTCCAATTCATCGCCATCGTCTGCAGACCCCCACAATGAGACTACTGGATCCGACTCCACTTCTCGCCAATCCGCTAGAACTCCCTTCACTAACCTCAACCAGGTCGATGCTGACCTTGCCCTCGCACGTACCCTTCAAGAACAGGTTCTCTCTATCCCTCTTTTGATGTCACTGTTCCTACTTTGTTCTTGTTCCTGTTCAATTTGTGGTTTCTTTTCTGTTTCTTGTTGTTCTGTGTTCAATTCGGTCTGTTGTGAGCTGCTTTGGGAACTGTGTGATNCTTCGCTATCGCCTTCCCCAGGAAAGGGTACGTCATATAATCAGGGGAGACCCCATTCCGCAGCATCCTAACGAAAACCGTAATTGAACGATTTGGGTTTCTGGAATTTGAAAAACCCCTTATGAGAGTGTTCCATTTGAAGGTGGTGGGATTGGGAAGATTCAATAACAGTTTATATGAGTAGTCGAGATCGCCGGCGGGGGAGAGTGCAGAGAAGGAGAGAAGTTTCGATACGACGGCGTCATCTTGAGAGACACCGAAAGTGAAAAGCAGAGCATGGATTCTTCTTAATTCGGACATTGATTTGCATTTGTCGAGAAGAGAGATTAGAGAAGATGCATTCATCATCGTTGGAATGCATTCGACACTGCAGCCAACGGATTAAAGTTGAGTTTTTTTTTAAAATAAAATAATATTAAATATTAAATTTAAATAAAATTTATTATTTTAAAAAAAATTAAAATTGAGAATTGCCTTTTGTAATAACTTTTAAAATAATTAGTATGTTTGGTAAATTAATACTAAATTATTGTGATTTATATATAATTATTTTTATATTAATATTTAATTTATAATTTATTTTAAGATAGTTGTTTAAAAAAAATTATATTATTAGATGTAGTTTTGTTTTTGTCAAACTATTTATCGAAAAAAGAAAAAGGAAAAACAAATTCTTATTTTCTATATTTGTTTATTTTGAAATAATAATAAAAATAGAAAAAAGAAAAAAGAAAAAAGAAAAAGGTGCGTCTGTTTGTTTGTTCTTGCTCGGCTCTCAAAAATTATATAATCTTCGTCGTGTTCTTAGATTCTTCTGTTACTATTAATTTTTTTCTTCTCTGAAATCTTTGATTCTCCTTCTCCTAATTCTTCATATCATCTCTTTTCCATCTTCCATTTGTCAAATCCAAATCTCCCTTTTCTCTCAAACCTCAATCTCCTTCTTTTATGGAGAACGAAGCCACCACTAACGCCACCAAACTTGGTTTTGATGGAGTCAAGCCACCGCCCACCACCGCCACCACCGCCTCCTCCGACCTTGAACACAACCCTAATTCCAATTCATCGCCATCGTCTGCAGACCCCCACAATGAGACTACTGGATCCGACTCCACTTCTCGCCAATCCGCTAGAACTCCCTTCACTAACCTCAACCAGGTCGATGCTGACCTTGCCCTCGCACGTACCCTTCAAGAACAGGTTCTCTCTATCCCTCTTTTGATGTCACTGTTCCTACTTTGTTCTTGTTCCTGTTCAATTTGTGGTTTCTTTTCTGTTTCTTGTTGTTCTGTGTTCAATTCGGTCTGTTGTGAGCTGCTTTGGGAACTGTGTGATGGGAAATCCTATCTTTTTTGTTTCCGTTCGATTTTTTAAGGAATTTGGTTGTGTGTGGAATCCATGTTCTGCTTTGTGGATTTGAACTATCCTGCGAGTCTATTTATTGTTTAGATTCTGGATTTTGTTTTCCTTTCTTGATTATCTGATTGTGTTTTATTGTTCTTGATTGCTGTGATTTCTAGCATCGGCTTCATTTGAGTTCATTAGGTTTCTGCTAGTTTGTGTAGGGAACACTTTGGGGAGTTGTTGACAAACACCAATCATACAATGAGCACGCTTTTGTTACTTTCTTTTATCTCTCAATATTGATTGACTAGTTCATTGTGAGCAAACGTACGTTAGTGAATGCAAATTGTTTTCATCTTGATTTGGTAATGATGATTTTCCAGCTTATGGGGGTAAGAGAGAGGGTATTGGAGGCTTAGAATGGTGAATGCAAAGGGTTTCAGTGATGTTTTCAATTGACAATGATTAATTATGAGCAGGAAAGGGCATACCTGAGGCTTAGAATGGTGAGTATGGGGATTGATTTTGGAAGTTGGGAAGGTGGAAGTTATGCATTAGATGACGAGGACGGTTTTGGTGATCTGCACGATCATACAGAATCTGATGGAGATGATGATGATGAGGAGTTTGATGGAACAAATGTCAATGATGACGACGATGTGTTTGATGTGCATGCTCGTGAAGATGGTGGAGAGCATATCAACCCCAGCTTTGAACTTGATCCTGGTAATTTTTTGAGTGACGAGGCTTATGCTAGAGCCTTACAAGATTCTGAAGACAGGGAAATGGCTGCCAGATTGATGGCCCTTGCTGGATTACATGATGGTGAGTTTGCTTGGCCATGTGTCTCTCTATGTAATGCATTATTACTTCTGTGGAGGTCTCTAAACCATGGAGGACTAAAATCTTTTTTATATCTTGTTGCAGAGGAAGCAGATGACACGGACGATCAAGGCGAAAATTCTCAGGTGCATTTATATATATATAGCTACCCTCTTTAAACTCTCAAGTGCTTCATCCTTCTACCTTGGTCATAAGATCCAACCCTTCCTTTACTTGATTATCATTTATATTCCCACAACTCTAGCATACGATTCAACATTATCACGACCCTTTATTTTTCTGGAGAATCTGGTCTTGGATGAATAAAAGGATTTTTAAAAAATCACTCTTCCTTGGATGTTTTTCAGGATCTTATCAGACTACATATATTTTATATATAGCTACTCCTGTTTAATCTCTCAAGTGTTTCATCTTTCTTCTATGATATGCACAAATTGGGATGTTCTTTTATAGCTCACTTGGTCTATGAGGCATTTCTTATCTCTTGTATTTTCTGATTAATGATACTGTTCTTTTCCTAAAAAACTGAAAACTGTACTGTTTGTGTCTATCTTGACCTCTGTTACTCCTTCAGAAAGTGTTTACAAGTCTATGTTTCGTAGGCTGGTTTTCGACATCCAAAAGCCCTTCCAAGAAGGTGTATTTCTAAGTTGTCGGTACTATTAGCAACATGAACTAGAGCTTCAAAAGCAAAGAGAAGTTAAGTTGGTGGGATGTTAGGCAAAATGGCTTGTGCCAAAACTCTCCTGGAGATAGCCACCATTTTTCACATTTGCAGCTTTATGAAAATCTTTTCTAAGAAGCCAAAAAAATCTTGAAGGATGCTTAAGGTACTTTGTGGCCTTTATTTAAGCCATGAGAAAAACACTCAGCCATAGCAGTTACTTCCTTCCTTGACTTGCAATCCTTCCTTGACTTGCTACTACCATTAATCATATCTTTCTAAATTTTTATGAAATTGTCTTTGAAAATGTTTTGACCCTTAATAAAGAACTCATTCAAATAGCCAGCCAATCCAAGAAGATATAGCTGTATTTTGGATTTATTACAGCCATTAAAATATCCTTTTTGTAAGGGCCTATGACAGCCCTAGAAACAGGATTCCTTTGAGATCTCTTGACTAAAGCCTTCTTCATTTGTCGAGGAAAAGAAAATTTCGAAGTTCTTGAATTACTTCCATTTGTTGCCCCATTGGATAAACATAGACAATTAACAGAGAGCACCCTTAATGATAAGGTGTCATCTATGTGTTTTAGAGCTTCCCTTCTGTTTAATCAGCTATCATTCAAACTTCTCTTTACTGTATTATCCAACAACGATGTCTTCTCCCTTGGATCTTCCTTTTAATGGATGTTATAAGTCCATCATTCTGACTTTTAAGGATCTTCTTTATAGTTTTCAACTTCAGCATGAGGGAATGGCCTGTTGAGGGTGGTTTTAGTAGGCTAGTGATTGAAGGTGACTGTTGCCTTGTAGCCCCAGAATTCTGAAATTGCAACATCTTTCCATTATATCGACAAAAATATCTTTTCAATATCTTCGGAACAACTGAATAATTATTCTGTTTCTCGTATTAGACTAGGTGAATTTTTTATTCCGAAAGGCATGTCTACTAGTAAAAGATTTGTATAAGTTAATTGAAGTGAGAATAAAGGGATGGTTCAATTCAATAGTAGCCTGGCTTTAGTATCCTATGAGTTTCTTTGGCAACAAAATGTTATAGGGTCCTTTTGGTGCATTGTCCCAGGAGAATAATCGAAGTGTGCACAAGATCATTGTTTGGTAACGTGGAAGTTACCAACCCCATAACCCAAAATAGCATATAGATCACAAAGGCATTTGATTCTTATAAAGTATATCTACCCATGAAAGAGATTGTGATCTCTACTTCTTTCACTTCTGCTCGTCATGCTTCTCTGCCTTATCTTCCAACTACAACTCCACCTGCTGTGGAAGGTCCATCTGTTTCCTCATAGTTTGTCACAGCCCTCCCTGCGGTGTGGATGAGGCCACTTTTATAACCTTTTCCTTTGCTGTCCAACCATCAAATAGAAAGATCTTCTAATGCAGAAGAAAAAGTCCCAAGAAGGGTCAGTCCAGATGCAAAATTTTTCCAGAACAATCACAAACGCATCAATGATGATCAGGATGAGCGACTTGATGAGAGTTCGTAAGGACCTCACCAGCTTCCTATCTATTAAATGTGATTTGTGATTTGATCTGTTGATGGTTGGATAATCATAGTCATATATGGCTAACTGGGGGGATTGGTGCCTTTGAGAGAACTCATTTTGTTAGTCACACCAAAGGCATGTTCCAAGCTATTGTCTGTGTTGATCAAAATCCTCCTGTCCCTTTTGAATGAAACCTTTTAAACTCTTAATATCAGATGACATATCTGATTTATTGTTCTATCAAAATACTCATCAAGGCTTGGTTTGCAGGATACGTGGGAGGATGTTGACCCAGATGAACTGTCGTACGAGGTGAGTTTGGTCTGATGGAGTGATGCCCATGCGTTATAATAGTTTATTCTTGAGAGGATAATTAATATTTCAGGAGTTGCTCGCATTGGGTGAAGTGGTAGGAACTGAGAGCAGAGGGCTATCTGCTGATACAATTGCTTCCTTACCCTCCATAAACTTCAAGGCAGGGAGCGGTCAGACTGGAAGCAACGATTCGTGAGTGATTTGAAGCAGTTTTGGTTTTCTTTACCATCCATGTCTTGTTTACTTAGCTTTTGGCTCTCATTTCTCAGATGTGTCATTTGTCGGTTGGATTTCGAGGACGATGAAACCCTGACTGTTCTTTCCTGCAAACACTCCTACCATTCGGAGTGCATAAATAATTGGTTAAAAATAAACAAGGTATGCCATTTTTACATGTGCCTTCCTATTAGCAAGGATCATTGTTTTCTTTCTCCTGCAACTTCTGCTCTCCGCCCCCTAAACTGCGATAACGACGATACTTTTGTGCTTGGAATCGATGCGAACAATAACGTACATATGGCTACTACCGAAGCAGCGATATCTAAAGCTTTGCTGCTGCTTTTGTACAGGTCTGCCCTGTTTGCAGTGCTGAAGTGAGTTCTACAGCTGGTGGGAGCAGTTAAGTTAGTTGTAGCATGTGCTATGGAATGTACCAAAATCAACATCTCACGAAGTTAAACGACGAAGGATTTTAATTTTTGTTTTGTTTTTTTTTTGTTTTTTTATAATCATTTTGCATACCCATTTCAGTTCTGAGTATGTGTGGAAAATGTGTCTGGTGGGTCATACAATCTCCGGTTTGATTCTGTAAACCAAGCCAAGATGTCATAGTCATGTGAATCTCTAATTTTTTATTCTCTTGCCTTGGCTTGGCTTCGGTGTTTAAACATAAATTTGGCCGCCGCCGGGGATAGCCAGGTTTTGTTTTCGAGGCCATTAGAAAGAAACTCGCACTTCTTCCAAATTTGATGCTCTTGGGATGTGAATTCTTCTGTACTACTTTTGAGCAACTACTTCCACTCCTCCATGTATATGATATCATATACAACTCACTCCACTTAATACTATTGTTGAAAACTATTTCTAA

mRNA sequence

AACGAAGCCACCACTAACGCCACCAAACTTGGTTTTGATGGAGTCAAGCCACCGCCCACCACCGCCACCACCGCCTCCTCCGACCTTGAACACAACCCTAATTCCAATTCATCGCCATCGTCTGCAGACCCCCACAATGAGACTACTGGATCCGACTCCACTTCTCGCCAATCCGCTAGAACTCCCTTCACTAACCTCAACCAGGTCGATGCTGACCTTGCCCTCGCACGTACCCTTCAAGAACAGAACGAAGCCACCACTAACGCCACCAAACTTGGTTTTGATGGAGTCAAGCCACCGCCCACCACCGCCACCACCGCCTCCTCCGACCTTGAACACAACCCTAATTCCAATTCATCGCCATCGTCTGCAGACCCCCACAATGAGACTACTGGATCCGACTCCACTTCTCGCCAATCCGCTAGAACTCCCTTCACTAACCTCAACCAGGTCGATGCTGACCTTGCCCTCGCACGTACCCTTCAAGAACAGGAAAGGGCATACCTGAGGCTTAGAATGGTGAGTATGGGGATTGATTTTGGAAGTTGGGAAGGTGGAAGTTATGCATTAGATGACGAGGACGGTTTTGGTGATCTGCACGATCATACAGAATCTGATGGAGATGATGATGATGAGGAGTTTGATGGAACAAATGTCAATGATGACGACGATGTGTTTGATGTGCATGCTCGTGAAGATGGTGGAGAGCATATCAACCCCAGCTTTGAACTTGATCCTGGTAATTTTTTGAGTGACGAGGCTTATGCTAGAGCCTTACAAGATTCTGAAGACAGGGAAATGGCTGCCAGATTGATGGCCCTTGCTGGATTACATGATGAGGAAGCAGATGACACGGACGATCAAGGCGAAAATTCTCAGGATACGTGGGAGGATGTTGACCCAGATGAACTGTCGTACGAGGAGTTGCTCGCATTGGGTGAAGTGGTAGGAACTGAGAGCAGAGGGCTATCTGCTGATACAATTGCTTCCTTACCCTCCATAAACTTCAAGGCAGGGAGCGGTCAGACTGGAAGCAACGATTCATGTGTCATTTGTCGGTTGGATTTCGAGGACGATGAAACCCTGACTGTTCTTTCCTGCAAACACTCCTACCATTCGGAGTGCATAAATAATTGGTTAAAAATAAACAAGGTCTGCCCTGTTTGCAGTGCTGAAGTGAGTTCTACAGCTGGTGGGAGCAGTTAAGTTAGTTGTAGCATGTGCTATGGAATGTACCAAAATCAACATCTCACGAAGTTAAACGACGAAGGATTTTAATTTTTGTTTTGTTTTTTTTTTGTTTTTTTATAATCATTTTGCATACCCATTTCAGTTCTGAGTATGTGTGGAAAATGTGTCTGGTGGGTCATACAATCTCCGGTTTGATTCTGTAAACCAAGCCAAGATGTCATAGTCATGTGAATCTCTAATTTTTTATTCTCTTGCCTTGGCTTGGCTTCGGTGTTTAAACATAAATTTGGCCGCCGCCGGGGATAGCCAGGTTTTGTTTTCGAGGCCATTAGAAAGAAACTCGCACTTCTTCCAAATTTGATGCTCTTGGGATGTGAATTCTTCTGTACTACTTTTGAGCAACTACTTCCACTCCTCCATGTATATGATATCATATACAACTCACTCCACTTAATACTATTGTTGAAAACTATTTCTAA

Coding sequence (CDS)

AACGAAGCCACCACTAACGCCACCAAACTTGGTTTTGATGGAGTCAAGCCACCGCCCACCACCGCCACCACCGCCTCCTCCGACCTTGAACACAACCCTAATTCCAATTCATCGCCATCGTCTGCAGACCCCCACAATGAGACTACTGGATCCGACTCCACTTCTCGCCAATCCGCTAGAACTCCCTTCACTAACCTCAACCAGGTCGATGCTGACCTTGCCCTCGCACGTACCCTTCAAGAACAGAACGAAGCCACCACTAACGCCACCAAACTTGGTTTTGATGGAGTCAAGCCACCGCCCACCACCGCCACCACCGCCTCCTCCGACCTTGAACACAACCCTAATTCCAATTCATCGCCATCGTCTGCAGACCCCCACAATGAGACTACTGGATCCGACTCCACTTCTCGCCAATCCGCTAGAACTCCCTTCACTAACCTCAACCAGGTCGATGCTGACCTTGCCCTCGCACGTACCCTTCAAGAACAGGAAAGGGCATACCTGAGGCTTAGAATGGTGAGTATGGGGATTGATTTTGGAAGTTGGGAAGGTGGAAGTTATGCATTAGATGACGAGGACGGTTTTGGTGATCTGCACGATCATACAGAATCTGATGGAGATGATGATGATGAGGAGTTTGATGGAACAAATGTCAATGATGACGACGATGTGTTTGATGTGCATGCTCGTGAAGATGGTGGAGAGCATATCAACCCCAGCTTTGAACTTGATCCTGGTAATTTTTTGAGTGACGAGGCTTATGCTAGAGCCTTACAAGATTCTGAAGACAGGGAAATGGCTGCCAGATTGATGGCCCTTGCTGGATTACATGATGAGGAAGCAGATGACACGGACGATCAAGGCGAAAATTCTCAGGATACGTGGGAGGATGTTGACCCAGATGAACTGTCGTACGAGGAGTTGCTCGCATTGGGTGAAGTGGTAGGAACTGAGAGCAGAGGGCTATCTGCTGATACAATTGCTTCCTTACCCTCCATAAACTTCAAGGCAGGGAGCGGTCAGACTGGAAGCAACGATTCATGTGTCATTTGTCGGTTGGATTTCGAGGACGATGAAACCCTGACTGTTCTTTCCTGCAAACACTCCTACCATTCGGAGTGCATAAATAATTGGTTAAAAATAAACAAGGTCTGCCCTGTTTGCAGTGCTGAAGTGAGTTCTACAGCTGGTGGGAGCAGTTAA

Protein sequence

NEATTNATKLGFDGVKPPPTTATTASSDLEHNPNSNSSPSSADPHNETTGSDSTSRQSARTPFTNLNQVDADLALARTLQEQNEATTNATKLGFDGVKPPPTTATTASSDLEHNPNSNSSPSSADPHNETTGSDSTSRQSARTPFTNLNQVDADLALARTLQEQERAYLRLRMVSMGIDFGSWEGGSYALDDEDGFGDLHDHTESDGDDDDEEFDGTNVNDDDDVFDVHAREDGGEHINPSFELDPGNFLSDEAYARALQDSEDREMAARLMALAGLHDEEADDTDDQGENSQDTWEDVDPDELSYEELLALGEVVGTESRGLSADTIASLPSINFKAGSGQTGSNDSCVICRLDFEDDETLTVLSCKHSYHSECINNWLKINKVCPVCSAEVSSTAGGSS
Homology
[Close]
BLAST of Cp4.1LG01g04320 vs. Swiss-Prot
Match: BBR_ARATH (E3 ubiquitin ligase BIG BROTHER-related OS=Arabidopsis thaliana GN=BBR PE=2 SV=1)

HSP 1 Score: 297.7 bits (761), Expect = 1.9e-79
Identity = 165/267 (61.80%), Postives = 198/267 (74.16%), Query Frame = 1 

Query: 140 SARTPFTNLNQVDADLALARTLQEQERAYLRLRMVSMGIDFGSWEGGSYALDDEDGFGDL 199
           SAR PFTNL+Q+DADLALARTLQEQERAY+ L M S   D+GSWE GSY  D ED F D 
Sbjct: 83  SARVPFTNLSQIDADLALARTLQEQERAYMMLTMNSEISDYGSWETGSYVYD-EDEFDDP 142

Query: 200 HDHTESDGDD-----DDEEFDGTNVNDDDDVFDVHAREDGGEHINPSFELDPGNFLSDEA 259
            +  E D +D     DD + DG +VN       VHA ED  E    S +++   +  DEA
Sbjct: 143 ENEDEDDDEDEYETDDDPQEDGLDVN-------VHANEDDQEDDGNS-DIEEVAYTDDEA 202

Query: 260 YARALQDSEDREMAARLMALAGLHDEEADDTDDQGENSQDTWEDVDPDELSYEELLALGE 319
           YARALQ++E+R+MAARL AL+GL +   +D +D+   SQD W+++DPDELSYEELLALG+
Sbjct: 203 YARALQEAEERDMAARLSALSGLANRVVEDLEDESHTSQDAWDEMDPDELSYEELLALGD 262

Query: 320 VVGTESRGLSADTIASLPSINFKAGSGQTGSNDSCVICRLDFEDDETLTVLSCKHSYHSE 379
           +VGTESRGLSADTIASLPS  +K G  Q G+N+SCVICRLD+EDDE L +L CKHSYHSE
Sbjct: 263 IVGTESRGLSADTIASLPSKRYKEGDNQNGTNESCVICRLDYEDDEDLILLPCKHSYHSE 322

Query: 380 CINNWLKINKVCPVCSAEVSSTAGGSS 402
           CINNWLKINKVCPVCSAEVS++  G S
Sbjct: 323 CINNWLKINKVCPVCSAEVSTSTSGQS 340

[Close]
BLAST of Cp4.1LG01g04320 vs. Swiss-Prot
Match: BB_ARATH (E3 ubiquitin ligase BIG BROTHER OS=Arabidopsis thaliana GN=BB PE=1 SV=1)

HSP 1 Score: 113.2 bits (282), Expect = 6.5e-24
Identity = 62/144 (43.06%), Postives = 88/144 (61.11%), Query Frame = 1 

Query: 252 DEAYARALQDSEDREMAARLMALAGLHDEEADDTDDQGENSQDTWEDVDPDELSYEELLA 311
           +   AR++Q  +  E +     +A  HD ++     Q        +D+DPD ++YEEL+ 
Sbjct: 106 ENTVARSVQIGDTDEHSEAEECIANEHDPDSPQVSWQ--------DDIDPDTMTYEELVE 165

Query: 312 LGEVVGTESRGLSADTIASLPSINFKAGS--GQTGSNDSCVICRLDFEDDETLTVLSCKH 371
           LGE VGTESRGLS + I +LP+  +K GS   +  + + CVIC+L ++  E    L CKH
Sbjct: 166 LGEAVGTESRGLSQELIETLPTKKYKFGSIFSRKRAGERCVICQLKYKIGERQMNLPCKH 225

Query: 372 SYHSECINNWLKINKVCPVCSAEV 394
            YHSECI+ WL INKVCPVC++EV
Sbjct: 226 VYHSECISKWLSINKVCPVCNSEV 241

[Close]
BLAST of Cp4.1LG01g04320 vs. Swiss-Prot
Match: RNF44_HUMAN (RING finger protein 44 OS=Homo sapiens GN=RNF44 PE=2 SV=1)

HSP 1 Score: 80.5 bits (197), Expect = 4.6e-14
Identity = 43/99 (43.43%), Postives = 59/99 (59.60%), Query Frame = 1 

Query: 298 DVDPDEL-SYEELLALGEVVG-TESRGLSADTIASLPSINFKAGSGQTGSNDSCVICRLD 357
           DVD  E+ +YE LL L E +G  + RGL+   I  LPS  F   S Q+     CV+C  D
Sbjct: 328 DVDDVEMENYEALLNLAERLGDAKPRGLTKADIEQLPSYRFNPDSHQS-EQTLCVVCFSD 387

Query: 358 FEDDETLTVLSCKHSYHSECINNWLKINKVCPVCSAEVS 395
           FE  + L VL C H +H++C++ WLK N+ CP+C A+ S
Sbjct: 388 FEARQLLRVLPCNHEFHTKCVDKWLKANRTCPICRADAS 425

[Close]
BLAST of Cp4.1LG01g04320 vs. Swiss-Prot
Match: RNF38_HUMAN (E3 ubiquitin-protein ligase RNF38 OS=Homo sapiens GN=RNF38 PE=1 SV=4)

HSP 1 Score: 80.5 bits (197), Expect = 4.6e-14
Identity = 41/99 (41.41%), Postives = 59/99 (59.60%), Query Frame = 1 

Query: 298 DVDPDEL-SYEELLALGEVVG-TESRGLSADTIASLPSINFKAGSGQTGSNDSCVICRLD 357
           DV+  E+ +YE LL L E +G  + RGL+   I  LPS  F   + Q+     CV+C  D
Sbjct: 411 DVEDGEVENYEALLNLAERLGEAKPRGLTKADIEQLPSYRFNPNNHQS-EQTLCVVCMCD 470

Query: 358 FEDDETLTVLSCKHSYHSECINNWLKINKVCPVCSAEVS 395
           FE  + L VL C H +H++C++ WLK N+ CP+C A+ S
Sbjct: 471 FESRQLLRVLPCNHEFHAKCVDKWLKANRTCPICRADAS 508

[Close]
BLAST of Cp4.1LG01g04320 vs. Swiss-Prot
Match: RNF44_RAT (RING finger protein 44 OS=Rattus norvegicus GN=Rnf44 PE=2 SV=1)

HSP 1 Score: 80.1 bits (196), Expect = 6.1e-14
Identity = 43/99 (43.43%), Postives = 59/99 (59.60%), Query Frame = 1 

Query: 298 DVDPDEL-SYEELLALGEVVG-TESRGLSADTIASLPSINFKAGSGQTGSNDSCVICRLD 357
           DVD  E+ +YE LL L E +G  + RGL+   I  LPS  F   S Q+     CV+C  D
Sbjct: 246 DVDDVEMENYEALLNLAERLGDAKPRGLTKADIEQLPSYRFNPDSHQS-EQTLCVVCFSD 305

Query: 358 FEDDETLTVLSCKHSYHSECINNWLKINKVCPVCSAEVS 395
           FE  + L VL C H +H++C++ WLK N+ CP+C A+ S
Sbjct: 306 FEVRQLLRVLPCNHEFHAKCVDKWLKANRTCPICRADAS 343

[Close]
BLAST of Cp4.1LG01g04320 vs. TrEMBL
Match: A0A0A0KL96_CUCSA (Uncharacterized protein OS=Cucumis sativus GN=Csa_5G175690 PE=4 SV=1)

HSP 1 Score: 483.8 bits (1244), Expect = 2.0e-133
Identity = 264/329 (80.24%), Postives = 283/329 (86.02%), Query Frame = 1 

Query: 82  QNEA--TTNATKLGFDGVKPPPTTATTASSDLEHNPNSNSSP---SSADPHNETTGSDST 141
           +NEA  TT +TKLG DGVKP P     ASSD + NPNSNS+P   S +DP N+TTGSDST
Sbjct: 2   ENEAATTTTSTKLGSDGVKPTPA----ASSDNDQNPNSNSNPPPTSLSDPQNDTTGSDST 61

Query: 142 S-----RQSARTPFTNLNQVDADLALARTLQEQERAYLRLRMVSMGIDFGSWEGGSYALD 201
           S     R S+RTPFTNL QVDADLALARTLQEQERAYL LRM S G DFGSWE GSY LD
Sbjct: 62  SLQTPSRHSSRTPFTNLTQVDADLALARTLQEQERAYLMLRMTSEGSDFGSWEAGSYVLD 121

Query: 202 DEDGFGDLHDHTESDGDDDDEEFDGTNVNDDDDVFDVHAREDGGEHINPSFELDPGNFLS 261
           DEDGFGD HDHTESDGDDD+   DGT+VNDD+DVFDVHA EDGGEH N +FELDPGNF S
Sbjct: 122 DEDGFGDPHDHTESDGDDDE---DGTDVNDDEDVFDVHAHEDGGEHNNSNFELDPGNFSS 181

Query: 262 DEAYARALQDSEDREMAARLMALAGLHDEEADDTDDQGENSQDTWEDVDPDELSYEELLA 321
           DEAYARALQD+EDREMAARL+ALA L D++ADDTDDQGENSQDTWEDVDPDELSYEELLA
Sbjct: 182 DEAYARALQDAEDREMAARLLALARLQDQDADDTDDQGENSQDTWEDVDPDELSYEELLA 241

Query: 322 LGEVVGTESRGLSADTIASLPSINFKAGSGQTGSNDSCVICRLDFEDDETLTVLSCKHSY 381
           LGEVVGTESRGLSADTIASLPSINFKAGS QTGSNDSCVICRLDFED ETLTVLSCKHSY
Sbjct: 242 LGEVVGTESRGLSADTIASLPSINFKAGSDQTGSNDSCVICRLDFEDGETLTVLSCKHSY 301

Query: 382 HSECINNWLKINKVCPVCSAEVSSTAGGS 401
           HS+C+ NWLKINK+CPVCSAEVS+  G S
Sbjct: 302 HSDCVTNWLKINKICPVCSAEVSTATGSS 323

[Close]
BLAST of Cp4.1LG01g04320 vs. TrEMBL
Match: A0A061E229_THECC (RING/U-box superfamily protein OS=Theobroma cacao GN=TCM_007711 PE=4 SV=1)

HSP 1 Score: 365.9 bits (938), Expect = 6.2e-98
Identity = 196/286 (68.53%), Postives = 230/286 (80.42%), Query Frame = 1 

Query: 114 NPNSNSSPSSADPHNETTGSDSTSRQSARTPFTNLNQVDADLALARTLQEQERAYLRLRM 173
           N N N+     +   E    + T + S RTPFTNL+QVDADLALARTLQEQERAY+ LRM
Sbjct: 106 NDNLNNESEHVEREEEEEEEEDTRQSSTRTPFTNLSQVDADLALARTLQEQERAYMMLRM 165

Query: 174 VSMGIDFGSWEGGSYALDDEDGFGDLHDHTESDGDD--DDEEFDGTNVNDDDDVFDVHAR 233
            + G D+GSWE GSY  DD+D FGD HDH ++DGD+  D+EE+DGT  +DD D FDVHA 
Sbjct: 166 NNDGSDYGSWEAGSYLHDDDDDFGDPHDHDDTDGDEEEDEEEYDGTAADDDVDAFDVHAH 225

Query: 234 -EDGGEHINPSFELDPGNFLSDEAYARALQDSEDREMAARLMALAGLHDEEADDTDDQGE 293
            E+G E  NP+ E +P  F SDEAYARALQD+E+REMAARL+ALAGL+D      +D G 
Sbjct: 226 AENGEEDYNPNVEFNPAVFSSDEAYARALQDAEEREMAARLLALAGLNDRGIVTLEDHGG 285

Query: 294 NSQDTWEDVDPDELSYEELLALGEVVGTESRGLSADTIASLPSINFKAGSGQTGSNDSCV 353
           NSQDTWE+VDPDELSYEELLALGEVVGTESRGLSAD+IASLPS+ +KAGS QTGSNDSCV
Sbjct: 286 NSQDTWEEVDPDELSYEELLALGEVVGTESRGLSADSIASLPSVTYKAGSSQTGSNDSCV 345

Query: 354 ICRLDFEDDETLTVLSCKHSYHSECINNWLKINKVCPVCSAEVSST 397
           +CR+D+ED ++LTVLSCKHSYH ECINNWLKINKVCPVCSAEVS++
Sbjct: 346 VCRVDYEDGDSLTVLSCKHSYHPECINNWLKINKVCPVCSAEVSTS 391

[Close]
BLAST of Cp4.1LG01g04320 vs. TrEMBL
Match: A0A067L0A6_JATCU (Uncharacterized protein OS=Jatropha curcas GN=JCGZ_05968 PE=4 SV=1)

HSP 1 Score: 364.8 bits (935), Expect = 1.4e-97
Identity = 203/312 (65.06%), Postives = 235/312 (75.32%), Query Frame = 1 

Query: 88  NATKLGFDGVKPPPTTATTASSDLEHNPNSNSSPSSADPHN---ETTGSDSTSRQSARTP 147
           N  KLG    K          S+ E     N +  SA+ +N   E   +    + S RTP
Sbjct: 3   NNPKLGSGEAKSIGNNNNNNDSEREQEQEQNLNLGSANDNNGDEEEQEAQPPRQSSRRTP 62

Query: 148 FTNLNQVDADLALARTLQEQERAYLRLRMVSMGIDFGSWEGGSYALDDEDGFGDLHDHTE 207
           FTNL+QVDADLALARTLQEQERAY+ LR  + G D+GSWE GSY  DDED FGD  D ++
Sbjct: 63  FTNLSQVDADLALARTLQEQERAYMMLRFGNEGSDYGSWEAGSYFPDDEDDFGDPDDDSD 122

Query: 208 SDGDDDDEEFDGTNVNDDDDVFDVHAREDGGEHINPSFELDPGNFLSDEAYARALQDSED 267
            D DD++EE DGT+V+D  D FDVHA  D     NP+ +LDP  F SDEAYARALQD+E+
Sbjct: 123 GDDDDEEEEEDGTDVDDSMDAFDVHAHTDADVDNNPAVDLDPAMFSSDEAYARALQDAEE 182

Query: 268 REMAARLMALAGLHDEEADDTDDQGENSQDTWEDVDPDELSYEELLALGEVVGTESRGLS 327
           REMAARL+ALAG+++ E +D +D G NSQD WE+VDPDELSYEELLALGEVVGTESRGLS
Sbjct: 183 REMAARLLALAGINEREVEDVEDLGANSQDAWEEVDPDELSYEELLALGEVVGTESRGLS 242

Query: 328 ADTIASLPSINFKAGSGQTGSNDSCVICRLDFEDDETLTVLSCKHSYHSECINNWLKINK 387
           ADTIASLPS+NFKAGS Q GSNDSCVICRLD++D ETLTVLSCKHSYHSECIN+WLKINK
Sbjct: 243 ADTIASLPSVNFKAGSSQNGSNDSCVICRLDYDDGETLTVLSCKHSYHSECINDWLKINK 302

Query: 388 VCPVCSAEVSST 397
           VCPVCS EVSS+
Sbjct: 303 VCPVCSKEVSSS 314

[Close]
BLAST of Cp4.1LG01g04320 vs. TrEMBL
Match: M5VR71_PRUPE (Uncharacterized protein OS=Prunus persica GN=PRUPE_ppa008876mg PE=4 SV=1)

HSP 1 Score: 364.4 bits (934), Expect = 1.8e-97
Identity = 206/318 (64.78%), Postives = 238/318 (74.84%), Query Frame = 1 

Query: 91  KLGFDGVKPPPTTATTASSDLEHNPNSNSSPSSADPHNETTGSDSTS--------RQSAR 150
           KLG  G   P      + S+ E NPN N      +   E T   S           QS+R
Sbjct: 7   KLGSGGGLKPNNN--NSISEQEQNPNLNQCE---EQEQEVTTESSQLVDPPSPPVPQSSR 66

Query: 151 TPFTNLNQVDADLALARTLQEQERAYLRLRMVSMGIDFGSWEGGSYALDDEDGFGDLHDH 210
           TPFTNL+QVDADLALARTLQEQERAY+ LRM +   D+GSWE GSY  +DED F D HD 
Sbjct: 67  TPFTNLSQVDADLALARTLQEQERAYMMLRMNNEDSDYGSWEAGSYVHEDEDDFNDFHDD 126

Query: 211 TESDGDDDDEEFDGTNVNDDDDVFDVHAREDGGEHINPSFELDPGNFLSDEAYARALQDS 270
           T  D +DD+E++DGT V++D+D FDVH  +D GE  NP  E DP  F SDEAYARALQD+
Sbjct: 127 T--DDNDDEEQYDGTEVDNDEDAFDVHGHDDAGEDDNPRVEYDPAVFSSDEAYARALQDA 186

Query: 271 EDREMAARLMALAGLHDEEADDTDDQGENSQDTWEDVDPDELSYEELLALGEVVGTESRG 330
           EDREMAARLMALAG++D E + T++ G NSQDTWE+VDPDELSYEEL+ALGEVVGTESRG
Sbjct: 187 EDREMAARLMALAGINDREVEHTEEHGGNSQDTWEEVDPDELSYEELIALGEVVGTESRG 246

Query: 331 LSADTIASLPSINFKAGSGQTGSNDSCVICRLDFEDDETLTVLSCKHSYHSECINNWLKI 390
           LSADTIASLPS+++K GSGQ GSN+SCVICRLD+E  E LT+LSCKHSYHSECINNWL I
Sbjct: 247 LSADTIASLPSVSYKTGSGQNGSNESCVICRLDYEAGENLTILSCKHSYHSECINNWLTI 306

Query: 391 NKVCPVCSAEVSSTAGGS 401
           NKVCPVCSAEV ST+G S
Sbjct: 307 NKVCPVCSAEV-STSGNS 316

[Close]
BLAST of Cp4.1LG01g04320 vs. TrEMBL
Match: A0A151TQ99_CAJCA (RING finger protein 38 OS=Cajanus cajan GN=KK1_008406 PE=4 SV=1)

HSP 1 Score: 359.8 bits (922), Expect = 4.4e-96
Identity = 205/321 (63.86%), Postives = 237/321 (73.83%), Query Frame = 1 

Query: 85  ATTNAT-KLGFDGVKPPPTTATTASSDL---EHNPNSNSSPSSADPH-----NETTGSDS 144
           A  NAT K+G +GVK          S+L   EH      +    D        E TGS  
Sbjct: 10  ANNNATAKVGSEGVKSNNHNLEEEHSNLNGEEHMAEEVETEEEEDREAEEGEGEATGSAP 69

Query: 145 TSRQSARTPFTNLNQVDADLALARTLQEQERAYLRLRMVSMGIDFGSWEGGSYALDDEDG 204
            +RQ +RTPFTNL+QVDADLALARTLQEQERAY+ LRM + G D+GSWEGGSY  DD D 
Sbjct: 70  NARQPSRTPFTNLSQVDADLALARTLQEQERAYMMLRMNNEGSDYGSWEGGSYLHDDGDD 129

Query: 205 FGDLHDHTESDGDDDDEEFDGTNVNDDDDVFDVHAREDGGEHINPSFELDPGNFLSDEAY 264
           F DL D T+ D +DDDE+ D     +D+D FDVHA    GEH NPS E DP  F SDEAY
Sbjct: 130 FDDLQDGTDVD-EDDDEDDDNEEEYEDEDAFDVHAHGSAGEHDNPSIEFDPDVFSSDEAY 189

Query: 265 ARALQDSEDREMAARLMALAGLHDEEADDTDDQGENSQDTWEDVDPDELSYEELLALGEV 324
           ARALQ++E+REMAARL+ALAG++D E +D ++ G NSQD WEDVDPDELSYEELLALGEV
Sbjct: 190 ARALQEAEEREMAARLLALAGINDREVEDIEEHGANSQDAWEDVDPDELSYEELLALGEV 249

Query: 325 VGTESRGLSADTIASLPSINFKAGSGQTGSNDSCVICRLDFEDDETLTVLSCKHSYHSEC 384
           VGTESRGLS+DTIA LPS+N+K GS Q GSNDSCVICR+D+ED E+LTVLSCKH YH EC
Sbjct: 250 VGTESRGLSSDTIACLPSVNYKTGSDQHGSNDSCVICRMDYEDGESLTVLSCKHLYHPEC 309

Query: 385 INNWLKINKVCPVCSAEVSST 397
           INNWLKINKVCPVCS EVS++
Sbjct: 310 INNWLKINKVCPVCSTEVSAS 329

[Close]
BLAST of Cp4.1LG01g04320 vs. TAIR10
Match: AT3G19910.1 (AT3G19910.1 RING/U-box superfamily protein)

HSP 1 Score: 297.7 bits (761), Expect = 1.0e-80
Identity = 165/267 (61.80%), Postives = 198/267 (74.16%), Query Frame = 1 

Query: 140 SARTPFTNLNQVDADLALARTLQEQERAYLRLRMVSMGIDFGSWEGGSYALDDEDGFGDL 199
           SAR PFTNL+Q+DADLALARTLQEQERAY+ L M S   D+GSWE GSY  D ED F D 
Sbjct: 83  SARVPFTNLSQIDADLALARTLQEQERAYMMLTMNSEISDYGSWETGSYVYD-EDEFDDP 142

Query: 200 HDHTESDGDD-----DDEEFDGTNVNDDDDVFDVHAREDGGEHINPSFELDPGNFLSDEA 259
            +  E D +D     DD + DG +VN       VHA ED  E    S +++   +  DEA
Sbjct: 143 ENEDEDDDEDEYETDDDPQEDGLDVN-------VHANEDDQEDDGNS-DIEEVAYTDDEA 202

Query: 260 YARALQDSEDREMAARLMALAGLHDEEADDTDDQGENSQDTWEDVDPDELSYEELLALGE 319
           YARALQ++E+R+MAARL AL+GL +   +D +D+   SQD W+++DPDELSYEELLALG+
Sbjct: 203 YARALQEAEERDMAARLSALSGLANRVVEDLEDESHTSQDAWDEMDPDELSYEELLALGD 262

Query: 320 VVGTESRGLSADTIASLPSINFKAGSGQTGSNDSCVICRLDFEDDETLTVLSCKHSYHSE 379
           +VGTESRGLSADTIASLPS  +K G  Q G+N+SCVICRLD+EDDE L +L CKHSYHSE
Sbjct: 263 IVGTESRGLSADTIASLPSKRYKEGDNQNGTNESCVICRLDYEDDEDLILLPCKHSYHSE 322

Query: 380 CINNWLKINKVCPVCSAEVSSTAGGSS 402
           CINNWLKINKVCPVCSAEVS++  G S
Sbjct: 323 CINNWLKINKVCPVCSAEVSTSTSGQS 340

[Close]
BLAST of Cp4.1LG01g04320 vs. TAIR10
Match: AT3G63530.1 (AT3G63530.1 RING/U-box superfamily protein)

HSP 1 Score: 113.2 bits (282), Expect = 3.6e-25
Identity = 62/144 (43.06%), Postives = 88/144 (61.11%), Query Frame = 1 

Query: 252 DEAYARALQDSEDREMAARLMALAGLHDEEADDTDDQGENSQDTWEDVDPDELSYEELLA 311
           +   AR++Q  +  E +     +A  HD ++     Q        +D+DPD ++YEEL+ 
Sbjct: 106 ENTVARSVQIGDTDEHSEAEECIANEHDPDSPQVSWQ--------DDIDPDTMTYEELVE 165

Query: 312 LGEVVGTESRGLSADTIASLPSINFKAGS--GQTGSNDSCVICRLDFEDDETLTVLSCKH 371
           LGE VGTESRGLS + I +LP+  +K GS   +  + + CVIC+L ++  E    L CKH
Sbjct: 166 LGEAVGTESRGLSQELIETLPTKKYKFGSIFSRKRAGERCVICQLKYKIGERQMNLPCKH 225

Query: 372 SYHSECINNWLKINKVCPVCSAEV 394
            YHSECI+ WL INKVCPVC++EV
Sbjct: 226 VYHSECISKWLSINKVCPVCNSEV 241

[Close]
BLAST of Cp4.1LG01g04320 vs. TAIR10
Match: AT3G47180.1 (AT3G47180.1 RING/U-box superfamily protein)

HSP 1 Score: 100.9 bits (250), Expect = 1.9e-21
Identity = 48/119 (40.34%), Postives = 79/119 (66.39%), Query Frame = 1 

Query: 277 LHDEEADDTDDQGENSQDTWEDVDPDELSYEELLALGEVVGTESRGLSADTIASLPSINF 336
           L D+E++   ++ ++  +  +++DPD+LSYEEL+ALG+ +G E+RGL+   I++  + + 
Sbjct: 90  LEDQESNSNLEEEDDFLEEEDEIDPDQLSYEELIALGDFIGVENRGLTPIEISTCLNAST 149

Query: 337 KAGSGQTGSNDSCVICRLDFEDDETLTVL-SCKHSYHSECINNWLKINKVCPVCSAEVS 395
              S      D CV+C+++FE+ E+L VL  C H YHSECI  WL+  K+CP+C +E S
Sbjct: 150 YVFSHNKNEIDRCVVCQMEFEERESLVVLRPCDHPYHSECITKWLETKKICPICCSEPS 208

[Close]
BLAST of Cp4.1LG01g04320 vs. TAIR10
Match: AT3G15070.1 (AT3G15070.1 RING/U-box superfamily protein)

HSP 1 Score: 87.0 bits (214), Expect = 2.8e-17
Identity = 38/100 (38.00%), Postives = 60/100 (60.00%), Query Frame = 1 

Query: 299 VDPDELSYEELLALGEVVGTESRGLSADTIASL------PSINFKAGSGQTGSNDSCVIC 358
           +D +++SYEELLAL + +GT   GLS++ +  L        IN + G       DSC IC
Sbjct: 372 LDIEDMSYEELLALSDQIGTVKTGLSSEDVKELLKRRTSTRINLEEGPSTDLETDSCTIC 431

Query: 359 RLDFEDDETLTVLSCKHSYHSECINNWLKINKVCPVCSAE 393
           + ++++++ +  L C H YH+EC+  WL I  VCP+C +E
Sbjct: 432 QENYKNEDKIATLDCMHKYHAECLKKWLVIKNVCPICKSE 471

[Close]
BLAST of Cp4.1LG01g04320 vs. TAIR10
Match: AT1G53190.1 (AT1G53190.1 RING/U-box superfamily protein)

HSP 1 Score: 81.3 bits (199), Expect = 1.5e-15
Identity = 39/104 (37.50%), Postives = 59/104 (56.73%), Query Frame = 1 

Query: 299 VDPDELSYEELLALGEVVGTESRGLSADTI------ASLPSINFKAGSGQTGSND----S 358
           +D +E+SYEELLAL E +GT + GL  + +       +   INF+  S    + D     
Sbjct: 382 LDIEEMSYEELLALSERIGTVNTGLPEEDVKNHLKTRTCSGINFEKESSSPRTKDLETEP 441

Query: 359 CVICRLDFEDDETLTVLSCKHSYHSECINNWLKINKVCPVCSAE 393
           C IC+  F+++E +  L C H YH+EC+  WL +  VCP+C +E
Sbjct: 442 CTICQESFKNEEKIATLDCGHEYHAECLEKWLIVKNVCPICKSE 485

[Close]
BLAST of Cp4.1LG01g04320 vs. NCBI nr
Match: gi|659090191|ref|XP_008445883.1| (PREDICTED: E3 ubiquitin ligase BIG BROTHER-related [Cucumis melo])

HSP 1 Score: 489.2 bits (1258), Expect = 6.9e-135
Identity = 269/333 (80.78%), Postives = 284/333 (85.29%), Query Frame = 1 

Query: 82  QNEA--TTNATKLGFDGVKPPPTTATTASSDLEHNPNSNSSPSS-------ADPHNETTG 141
           +NEA  TT ATKLG DGVKP P     ASSD + NPNSNS+ +S       +DP N+TTG
Sbjct: 2   ENEAATTTTATKLGSDGVKPTPA----ASSDNDQNPNSNSNSNSNPPPTSVSDPQNDTTG 61

Query: 142 SDSTS-----RQSARTPFTNLNQVDADLALARTLQEQERAYLRLRMVSMGIDFGSWEGGS 201
           SDSTS     R S+RTPFTNL QVDADLALARTLQEQERAYL LRM S G DFGSWE GS
Sbjct: 62  SDSTSLQTPSRHSSRTPFTNLTQVDADLALARTLQEQERAYLMLRMTSEGSDFGSWEAGS 121

Query: 202 YALDDEDGFGDLHDHTESDGDDDDEEFDGTNVNDDDDVFDVHAREDGGEHINPSFELDPG 261
           Y LDDEDGFGD HDHTESDGDDD  EFDGT+VND+DDVFDVHA EDGGEH N +FELDPG
Sbjct: 122 YVLDDEDGFGDPHDHTESDGDDD--EFDGTDVNDEDDVFDVHAHEDGGEHNNSNFELDPG 181

Query: 262 NFLSDEAYARALQDSEDREMAARLMALAGLHDEEADDTDDQGENSQDTWEDVDPDELSYE 321
           NF SDEAYARALQD+EDREMAARL+ALAGL D +ADDTDDQGENSQDTWEDVDPDELSYE
Sbjct: 182 NFSSDEAYARALQDAEDREMAARLLALAGLQDHDADDTDDQGENSQDTWEDVDPDELSYE 241

Query: 322 ELLALGEVVGTESRGLSADTIASLPSINFKAGSGQTGSNDSCVICRLDFEDDETLTVLSC 381
           ELLALGEVVGTESRGLSADTIASLPSINFKAGS QTGSNDSCVICRLDFED ETLTVLSC
Sbjct: 242 ELLALGEVVGTESRGLSADTIASLPSINFKAGSDQTGSNDSCVICRLDFEDGETLTVLSC 301

Query: 382 KHSYHSECINNWLKINKVCPVCSAEVSSTAGGS 401
           KHSYHS+CI NWLKINKVCPVCSAEVS+  G S
Sbjct: 302 KHSYHSDCITNWLKINKVCPVCSAEVSTATGSS 328

[Close]
BLAST of Cp4.1LG01g04320 vs. NCBI nr
Match: gi|449451741|ref|XP_004143619.1| (PREDICTED: E3 ubiquitin ligase BIG BROTHER-related [Cucumis sativus])

HSP 1 Score: 483.8 bits (1244), Expect = 2.9e-133
Identity = 264/329 (80.24%), Postives = 283/329 (86.02%), Query Frame = 1 

Query: 82  QNEA--TTNATKLGFDGVKPPPTTATTASSDLEHNPNSNSSP---SSADPHNETTGSDST 141
           +NEA  TT +TKLG DGVKP P     ASSD + NPNSNS+P   S +DP N+TTGSDST
Sbjct: 2   ENEAATTTTSTKLGSDGVKPTPA----ASSDNDQNPNSNSNPPPTSLSDPQNDTTGSDST 61

Query: 142 S-----RQSARTPFTNLNQVDADLALARTLQEQERAYLRLRMVSMGIDFGSWEGGSYALD 201
           S     R S+RTPFTNL QVDADLALARTLQEQERAYL LRM S G DFGSWE GSY LD
Sbjct: 62  SLQTPSRHSSRTPFTNLTQVDADLALARTLQEQERAYLMLRMTSEGSDFGSWEAGSYVLD 121

Query: 202 DEDGFGDLHDHTESDGDDDDEEFDGTNVNDDDDVFDVHAREDGGEHINPSFELDPGNFLS 261
           DEDGFGD HDHTESDGDDD+   DGT+VNDD+DVFDVHA EDGGEH N +FELDPGNF S
Sbjct: 122 DEDGFGDPHDHTESDGDDDE---DGTDVNDDEDVFDVHAHEDGGEHNNSNFELDPGNFSS 181

Query: 262 DEAYARALQDSEDREMAARLMALAGLHDEEADDTDDQGENSQDTWEDVDPDELSYEELLA 321
           DEAYARALQD+EDREMAARL+ALA L D++ADDTDDQGENSQDTWEDVDPDELSYEELLA
Sbjct: 182 DEAYARALQDAEDREMAARLLALARLQDQDADDTDDQGENSQDTWEDVDPDELSYEELLA 241

Query: 322 LGEVVGTESRGLSADTIASLPSINFKAGSGQTGSNDSCVICRLDFEDDETLTVLSCKHSY 381
           LGEVVGTESRGLSADTIASLPSINFKAGS QTGSNDSCVICRLDFED ETLTVLSCKHSY
Sbjct: 242 LGEVVGTESRGLSADTIASLPSINFKAGSDQTGSNDSCVICRLDFEDGETLTVLSCKHSY 301

Query: 382 HSECINNWLKINKVCPVCSAEVSSTAGGS 401
           HS+C+ NWLKINK+CPVCSAEVS+  G S
Sbjct: 302 HSDCVTNWLKINKICPVCSAEVSTATGSS 323

[Close]
BLAST of Cp4.1LG01g04320 vs. NCBI nr
Match: gi|1012245374|ref|XP_015942058.1| (PREDICTED: E3 ubiquitin ligase BIG BROTHER-related [Arachis duranensis])

HSP 1 Score: 369.8 bits (948), Expect = 6.1e-99
Identity = 199/277 (71.84%), Postives = 224/277 (80.87%), Query Frame = 1 

Query: 129 ETTGSDSTSRQSARTPFTNLNQVDADLALARTLQEQERAYLRLRMVSMGIDFGSWEGGSY 188
           E TGS   SRQ +RTPFTNL+QVDADLALARTLQEQERAY+ LRM + G D+GSWE GSY
Sbjct: 74  EQTGS--ASRQPSRTPFTNLSQVDADLALARTLQEQERAYMMLRMNNEGSDYGSWEAGSY 133

Query: 189 ALDDEDGFGDLHDHTESDGDDDDEEFDGTNV----NDDDDVFDVHAREDGGEHINPSFEL 248
             DD D F DLHD T+ D DD+D++ D  +     N+D+D FDVHA +D GEH NPS E 
Sbjct: 134 LHDDGDDFDDLHDGTDLDEDDEDDDDDDDDEEDYENEDEDAFDVHAHDDAGEHDNPSIEF 193

Query: 249 DPGNFLSDEAYARALQDSEDREMAARLMALAGLHDEEADDTDDQGENSQDTWEDVDPDEL 308
           DP  F SDEAYARALQ++E+REMAARL+ALAG++D EA + +D G NSQD WEDVDPDEL
Sbjct: 194 DPDVFSSDEAYARALQEAEEREMAARLLALAGINDREAGEAEDHGANSQDAWEDVDPDEL 253

Query: 309 SYEELLALGEVVGTESRGLSADTIASLPSINFKAGSGQTGSNDSCVICRLDFEDDETLTV 368
           SYEELLALGEVVGTESRGLS DT+A LPSI FK GS Q GSNDSCVICR+D+EDDE+LTV
Sbjct: 254 SYEELLALGEVVGTESRGLSTDTLAGLPSIKFKTGSDQHGSNDSCVICRMDYEDDESLTV 313

Query: 369 LSCKHSYHSECINNWLKINKVCPVCSAEVSSTAGGSS 402
           LSCKH YH ECINNWLKINKVCPVCS EVS  A GSS
Sbjct: 314 LSCKHLYHPECINNWLKINKVCPVCSTEVS--ASGSS 346

[Close]
BLAST of Cp4.1LG01g04320 vs. NCBI nr
Match: gi|1021569400|ref|XP_016175913.1| (PREDICTED: E3 ubiquitin ligase BIG BROTHER-related [Arachis ipaensis])

HSP 1 Score: 367.5 bits (942), Expect = 3.0e-98
Identity = 197/275 (71.64%), Postives = 223/275 (81.09%), Query Frame = 1 

Query: 129 ETTGSDSTSRQSARTPFTNLNQVDADLALARTLQEQERAYLRLRMVSMGIDFGSWEGGSY 188
           E TGS   SRQ +RTPFTNL+QVDADLALARTLQEQERAY+ LRM + G D+GSWE GSY
Sbjct: 74  EQTGS--ASRQPSRTPFTNLSQVDADLALARTLQEQERAYMMLRMNNEGSDYGSWEAGSY 133

Query: 189 ALDDEDGFGDLHDHTESDGDDDDEEFDGTN--VNDDDDVFDVHAREDGGEHINPSFELDP 248
             DD D F DLHD T+ D DD+D++ D      N+D+D FDVHA +D GEH NPS E DP
Sbjct: 134 LHDDGDDFDDLHDGTDLDEDDEDDDDDDEEDYENEDEDAFDVHAHDDAGEHDNPSIEFDP 193

Query: 249 GNFLSDEAYARALQDSEDREMAARLMALAGLHDEEADDTDDQGENSQDTWEDVDPDELSY 308
             F SDEAYARALQ++E+REMAARL+ALAG++D EA + ++ G NSQD WEDVDPDELSY
Sbjct: 194 DVFSSDEAYARALQEAEEREMAARLLALAGINDREAGEAEEHGANSQDAWEDVDPDELSY 253

Query: 309 EELLALGEVVGTESRGLSADTIASLPSINFKAGSGQTGSNDSCVICRLDFEDDETLTVLS 368
           EELLALGEVVGTESRGLS DT+A LPSI +K GS Q GSNDSCVICR+D+EDDE+LTVLS
Sbjct: 254 EELLALGEVVGTESRGLSTDTLAGLPSIKYKTGSDQHGSNDSCVICRMDYEDDESLTVLS 313

Query: 369 CKHSYHSECINNWLKINKVCPVCSAEVSSTAGGSS 402
           CKH YH ECINNWLKINKVCPVCS EVS  A GSS
Sbjct: 314 CKHLYHPECINNWLKINKVCPVCSTEVS--ASGSS 344

[Close]
BLAST of Cp4.1LG01g04320 vs. NCBI nr
Match: gi|502121218|ref|XP_004497227.1| (PREDICTED: E3 ubiquitin ligase BIG BROTHER-related isoform X2 [Cicer arietinum])

HSP 1 Score: 366.3 bits (939), Expect = 6.8e-98
Identity = 207/337 (61.42%), Postives = 248/337 (73.59%), Query Frame = 1 

Query: 82  QNEATTNAT----KLGFDGVKPPPTTATTASSDLEH-NPNSNSSPSSADP---------- 141
           +N+ TTN      K+   GVK           ++EH N NSN +     P          
Sbjct: 2   ENDTTTNTNNVTAKVSSGGVKS--NNHIHQEEEVEHSNFNSNLNGEENMPEKIEEKEEQE 61

Query: 142 ---HNETTGSDSTSRQSARTPFTNLNQVDADLALARTLQEQERAYLRLRMVSMGIDFGSW 201
              H + TGS++T+ Q +RTPFTNL+QVDADLALARTLQEQERAY+ LRM + G D+GSW
Sbjct: 62  QQQHEQPTGSETTTHQPSRTPFTNLSQVDADLALARTLQEQERAYMMLRMNNDGSDYGSW 121

Query: 202 EGGSYALDDEDGFGDLHDHTESDGDDDDEEFDGTNVNDDDDVFDVHAREDGGEHINPSFE 261
           EGGSY  DD D F DLHD T+ D +DDDE+ D  +  +++D FDVHA    GEH NP  E
Sbjct: 122 EGGSYLHDDGDDFDDLHDGTDVD-EDDDEDDDNEDEYENEDAFDVHAHASAGEHDNPIIE 181

Query: 262 LDPGNFLSDEAYARALQDSEDREMAARLMALAGLHDEEADDTDDQGENSQDTWEDVDPDE 321
            DP  F SDEAYARALQ++E+REMAARL+ALAG++D+E +D ++ G NSQD WEDVDPDE
Sbjct: 182 FDPELFSSDEAYARALQEAEEREMAARLLALAGINDQETEDMEEHGANSQDAWEDVDPDE 241

Query: 322 LSYEELLALGEVVGTESRGLSADTIASLPSINFKAGSGQTGSNDSCVICRLDFEDDETLT 381
           LSYEELLALGEVVGTESRGLS DTIA LPS+N+K GS Q GSNDSCVICR+D+EDDE+LT
Sbjct: 242 LSYEELLALGEVVGTESRGLSTDTIACLPSVNYKTGSDQHGSNDSCVICRVDYEDDESLT 301

Query: 382 VLSCKHSYHSECINNWLKINKVCPVCSAEVSSTAGGS 401
           VLSCKH YH ECINNWLKINKVCPVCS EVS+++G +
Sbjct: 302 VLSCKHLYHPECINNWLKINKVCPVCSTEVSASSGSN 335

The following BLAST results are available for this feature:
BLAST of Cp4.1LG01g04320 vs. Swiss-Prot
Match NameE-valueIdentityDescription
BBR_ARATH1.9e-7961.80E3 ubiquitin ligase BIG BROTHER-related OS=Arabidopsis thaliana GN=BBR PE=2 SV=1[more]
BB_ARATH6.5e-2443.06E3 ubiquitin ligase BIG BROTHER OS=Arabidopsis thaliana GN=BB PE=1 SV=1[more]
RNF44_HUMAN4.6e-1443.43RING finger protein 44 OS=Homo sapiens GN=RNF44 PE=2 SV=1[more]
RNF38_HUMAN4.6e-1441.41E3 ubiquitin-protein ligase RNF38 OS=Homo sapiens GN=RNF38 PE=1 SV=4[more]
RNF44_RAT6.1e-1443.43RING finger protein 44 OS=Rattus norvegicus GN=Rnf44 PE=2 SV=1[more]
BLAST of Cp4.1LG01g04320 vs. TrEMBL
Match NameE-valueIdentityDescription
A0A0A0KL96_CUCSA2.0e-13380.24Uncharacterized protein OS=Cucumis sativus GN=Csa_5G175690 PE=4 SV=1[more]
A0A061E229_THECC6.2e-9868.53RING/U-box superfamily protein OS=Theobroma cacao GN=TCM_007711 PE=4 SV=1[more]
A0A067L0A6_JATCU1.4e-9765.06Uncharacterized protein OS=Jatropha curcas GN=JCGZ_05968 PE=4 SV=1[more]
M5VR71_PRUPE1.8e-9764.78Uncharacterized protein OS=Prunus persica GN=PRUPE_ppa008876mg PE=4 SV=1[more]
A0A151TQ99_CAJCA4.4e-9663.86RING finger protein 38 OS=Cajanus cajan GN=KK1_008406 PE=4 SV=1[more]
BLAST of Cp4.1LG01g04320 vs. TAIR10
Match NameE-valueIdentityDescription
AT3G19910.11.0e-8061.80 RING/U-box superfamily protein[more]
AT3G63530.13.6e-2543.06 RING/U-box superfamily protein[more]
AT3G47180.11.9e-2140.34 RING/U-box superfamily protein[more]
AT3G15070.12.8e-1738.00 RING/U-box superfamily protein[more]
AT1G53190.11.5e-1537.50 RING/U-box superfamily protein[more]
BLAST of Cp4.1LG01g04320 vs. NCBI nr
Match NameE-valueIdentityDescription
gi|659090191|ref|XP_008445883.1|6.9e-13580.78PREDICTED: E3 ubiquitin ligase BIG BROTHER-related [Cucumis melo][more]
gi|449451741|ref|XP_004143619.1|2.9e-13380.24PREDICTED: E3 ubiquitin ligase BIG BROTHER-related [Cucumis sativus][more]
gi|1012245374|ref|XP_015942058.1|6.1e-9971.84PREDICTED: E3 ubiquitin ligase BIG BROTHER-related [Arachis duranensis][more]
gi|1021569400|ref|XP_016175913.1|3.0e-9871.64PREDICTED: E3 ubiquitin ligase BIG BROTHER-related [Arachis ipaensis][more]
gi|502121218|ref|XP_004497227.1|6.8e-9861.42PREDICTED: E3 ubiquitin ligase BIG BROTHER-related isoform X2 [Cicer arietinum][more]
Annotated Terms
The following terms have been associated with this gene:
Vocabulary: Molecular Function
TermDefinition
GO:0008270zinc ion binding
GO:0005515protein binding
Vocabulary: INTERPRO
TermDefinition
IPR013083Znf_RING/FYVE/PHD
IPR001841Znf_RING
GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
Category Term Accession Term Name
biological_process GO:0016567 protein ubiquitination
biological_process GO:0051865 protein autoubiquitination
biological_process GO:0043161 proteasome-mediated ubiquitin-dependent protein catabolic process
biological_process GO:0008150 biological_process
cellular_component GO:0005575 cellular_component
molecular_function GO:0016874 ligase activity
molecular_function GO:0005515 protein binding
molecular_function GO:0004842 ubiquitin-protein transferase activity
molecular_function GO:0008270 zinc ion binding
molecular_function GO:0061630 ubiquitin protein ligase activity
molecular_function GO:0003674 molecular_function
Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
Cp4.1LG01g04320.1Cp4.1LG01g04320.1mRNA


InterPro
Analysis Name: InterPro Annotations of Cucurbita pepo
Date Performed: 2017-12-02
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR001841Zinc finger, RING-typePFAMPF13639zf-RING_2coord: 347..389
score: 2.4
IPR001841Zinc finger, RING-typeSMARTSM00184ring_2coord: 349..389
score: 5.
IPR001841Zinc finger, RING-typePROFILEPS50089ZF_RING_2coord: 349..390
score: 11
IPR013083Zinc finger, RING/FYVE/PHD-typeGENE3DG3DSA:3.30.40.10coord: 345..393
score: 4.0
NoneNo IPR availablePANTHERPTHR14155RING FINGER DOMAIN-CONTAININGcoord: 284..397
score: 3.8
NoneNo IPR availablePANTHERPTHR14155:SF166E3 UBIQUITIN LIGASE BIG BROTHER-RELATEDcoord: 284..397
score: 3.8
NoneNo IPR availableunknownSSF57850RING/U-boxcoord: 343..395
score: 1.28

Synteny
The following gene(s) are orthologous to this gene:
GeneOrthologueOrganismBlock
Cp4.1LG01g04320CmaCh04G002850Cucurbita maxima (Rimu)cmacpeB720
Cp4.1LG01g04320CmaCh04G012550Cucurbita maxima (Rimu)cmacpeB723
Cp4.1LG01g04320CmoCh04G013290Cucurbita moschata (Rifu)cmocpeB675
Cp4.1LG01g04320CmoCh04G002930Cucurbita moschata (Rifu)cmocpeB673
Cp4.1LG01g04320Cla020053Watermelon (97103) v1cpewmB452
Cp4.1LG01g04320Csa5G175690Cucumber (Chinese Long) v2cpecuB438
Cp4.1LG01g04320MELO3C011752Melon (DHL92) v3.5.1cpemeB378
Cp4.1LG01g04320ClCG02G014100Watermelon (Charleston Gray)cpewcgB377
Cp4.1LG01g04320CSPI05G08610Wild cucumber (PI 183967)cpecpiB438
Cp4.1LG01g04320Lsi04G007940Bottle gourd (USVL1VR-Ls)cpelsiB359
Cp4.1LG01g04320MELO3C011752.2Melon (DHL92) v3.6.1cpemedB438
Cp4.1LG01g04320CsaV3_5G006070Cucumber (Chinese Long) v3cpecucB0542
Cp4.1LG01g04320CsaV3_4G024180Cucumber (Chinese Long) v3cpecucB0508
Cp4.1LG01g04320CsGy5G006000Cucumber (Gy14) v2cgybcpeB647
Cp4.1LG01g04320Carg25686Silver-seed gourdcarcpeB1186
Cp4.1LG01g04320Carg02052Silver-seed gourdcarcpeB1179
The following gene(s) are paralogous to this gene:
GeneParalogueOrganismBlock
Cp4.1LG01g04320Cp4.1LG01g10200Cucurbita pepo (Zucchini)cpecpeB374
The following block(s) are covering this gene:
GeneOrganismBlock
Cp4.1LG01g04320Cucumber (Chinese Long) v3cpecucB0550
Cp4.1LG01g04320Cucurbita maxima (Rimu)cmacpeB724
Cp4.1LG01g04320Cucurbita moschata (Rifu)cmocpeB676
Cp4.1LG01g04320Wild cucumber (PI 183967)cpecpiB445
Cp4.1LG01g04320Cucumber (Chinese Long) v2cpecuB444
Cp4.1LG01g04320Watermelon (97103) v1cpewmB379