CmaCh04G002850 (gene) Cucurbita maxima (Rimu) | Cucurbit Genomics Database (CuGenDB)

Overview


Name	CmaCh04G002850
Type	gene
Organism	Cucurbita maxima (Cucurbita maxima (Rimu))
Description	RING-finger ubiquitin ligase
Location	Cma_Chr04 : 1395056 .. 1400082 (+)

Genome Viewer

Gene Expression

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonfive_prime_UTRCDSthree_prime_UTR

Hold the cursor over a type above to highlight its positions in the sequence below.

ACTATTTATCAAAAAAAGAAAAAGGGAAAACAAATTCTTATTTTCTATATTTGTTTATTTTGAAATAATAATAAAAATAGAAAAAAGAAAAAAGAAAAAAGAAAAAGGTGCGTCTGTTTGTTTGTTCTTGCTCGGCTCTAAAAAATTATATAATCTTCGTCGTGTTCTTAGATTCTTCTGTTACTATTAATTTTTTTCTTCTCTGAAATATTTGATTCTCCTTCTCCTAATTCCTCATAGCATCTCTTTTCCATCTTCCATTTGTCAAATCCAAATCTCCCTTTTCTCTCAAACCTCAATCTCCTTCTTTTATGGAGAACGAAGCCACCACTAACGCCACCAAACTTGGTTTTGATGGAGTCAAGCCACCGCCCACCACTGCCACCACTGCCACCACCGCCACCACCGCCCCCTCCGACCTTGAACATAACCCTAATTCCAATTCATCGCCATCGTCTGCAGACCCCCACAATGAGACTACTGGATCCGACTCCACTTCTCGCCAATCCGCTAGAACTCCCTTCACTAACCTCAACCAGGTCGATGCTGACCTTGCCCTCGCACGTACCCTTCAAGAACAGGTCCTCTCTATCCCTCTTTTGATGTCACTGTTCCTTCTTTGTTCTTGTTCCTGTTCAATTTGTGGTTTCTTTTTTTGTTTCTTGTTGTTCTGTGTTCAATTCGGTCTGTTGTGAGCTGCTTTGGGAACTGTGTGATGGGAAATCCTATCTTTTTTGTTTCCGTTCGATTTTTTAAGGAATTTGGTTGCGTGTGGATTCGATGTTCTGCTTTGTGGAATTGAACTATCCTGCGAGTCTATTTATTGTTTAGATTCTGGATTTTGTTTTCCTTTCTTGATTATCTGATTGTGTTTTATTGTTCTTGCTTGCTGTGATTTCTAGCATCGGCTTCATTTGAGTTCATTAGGTTTCTGCTAGTTTGTGTAGGGAACACTTGGGGGAGTTGTTAACAAACACCAATCATACAATGAGCACGCTTTTGTTACTTTCTTTTATCTCTCAATATTGATTGACTAGTTCATTGTGAGCAAACGTACGTTAGTGAATGCAAATTGTGTTTCATCTTGATTTGGTAATGATGATTTTCCAGCTTATGGGGGTAAGAGGATATAAGAAAAAAGGGTTTTAGTGATGTTTTCAATTGACAATGATTAATTATGAGCAGGAAAGGGCATACCTGAGGCTTAGAATGGTGAGTATGGGGATTGATTTTGGAAGTTGGGAAGGTGGAAGTTATGCATTAGATGACGAGGACAGTTTTGGTGATTTGCACGATCATACAGAATCTGATGGAGATGAGGAGGAGGAGGAGGAGTTTGATGGAACAGATGTCAATGACGACGACGATGTGTTTGATGTGCATGCTCGTGAAGATGGTGGAGAGCATAGCAACCCCAGCTTTGAACTTGATCCTGGTAATTTTTCGAGTGACGAGGCTTATGCTAGAGCCTTACAAGATTCTGAAGACAGGGAAATGGCTGCTAGATTGATGGCCCTTGCTGGATTACATGATGGTGAGTATGCTTGGCCATGTGGCTCTCTATGTAATGCATTATTACTTCTGTGGAGGTCTCTAAATCATGGAGGACTAAAATCTTTTTTTATATCTTGTTGCAGAGGAAGCAGATGACACAGATGATCAAGGCGAAAATTCTCAGGTACATTTATATATATAGCTGCCCTGTTTAAACTCTTAAGTGTTTCATCCTTCTACCTTGGTCATAAGATCCAACCCTTCCTTTACTTGATTATCATTCATATTCCCACAAGCTCTAGCATACGATTCAACATTATCACGACCCTTTATTTTTCTGGAGAATCTGGTCTTGGATGAATAAAAGGTTTTTAAAAAATCACTCTTCCTTGGATGTTTTTCAGGATCTTATCAGACTACATATCTTATATATATAGCTACTCCTGTTTAATCTCTCAAGTGTTTCATCTTTCTTCTATGATATGCACAAATTGGGATGTTCTTTTATAGCTCACTTGGTCTATGAGGCATTTCTTATCTCTTTTATTTTCTGATTAATGATACTGTTCTTTTCCTAAAAAACTGAAAAACTATACTGTTTGTGTCTATCTCGACCTCTGTTACTCCTTCAGAAAGTGTCTACAAGTCTATGTTTCGTAGGCTGGTTTCCGACATCCAAAAGCCCTTCCAAGAAGTGTATTTCTAAGTTGTCGGTACTATTAGCAACATGAACTAGAGCTTCAAAAGCAAAGAGAAGTTAAGTTGGTGGGATGTTAGGGAAAATGGCTTGTGCCAAAACTCTCCTGGAGATAGCCACCATTTTTCACCTTTACAGCTTTATGAGAATCTTTTCTAAGAAGCCAAAAGAATCTTGAAGGATGCTTAAGGTACTAAGTGGCTTTTATTTAAGCCATGAGAAAAACACTCAGCCATAGCAGTTACTTCCTTCCTTGACTTGCTACTACCATTAATCATATCTTTCTAATTTTTATGAAATTATCTTTGAAATTGTTTTGACCCTTAATGAAGAACTCATTCAAATAGCCAGCCAATCCAAGAAGATATAGCTGTATTTTAAATTTATTACAGCCATTAAAATATCCTTTTTGTAAGGGCCTATGACAGCCCTAGAAACAGGATCCTTTTGAGATCTCTTGACTAAAGCCTTCTTCATTTGTCGAGGAAAAGAAAATTTCGAAGTTCTTGAATTACTTCCATTTGTTGCCCCATTGGATAAACATAGACAATTAACAGAGAGCACCCTTAATGATAAGGTGTCATCTATGTGTTTTAGAGCTTCCCTTCTGTTTAATCAGCTATCATTCAAGCTTCTCTTCTCTGTATTATCCAACAACGATGTCTTCTCCCTTGGATCTTCCTTTTAATGGATGTTATAAGTCCATTATTCTGACTTTTAAGGATCTTCTTTATAGTTTTCAACTTCAGCATGAGGGAATGGCCTGTTGAGGGTTGTTTTAGTAGGCTAGTGATTGAAGGTGACTGTTGCCTTGTAGCCCCAGAATTCTGAAATTATATCTTTCCATTATATCGACAAAAATGTCTTTTCAATATCTTCGGAACAACTGAATAATTATTCTGTTTCTCGTCTTAGACTAGGTGAATTTTTTATTCCGAAAGGCATGTCTACTAGTAGACGATTTGTATAAGTTAATTGAAGTGAGAATAAAGGGATGATTCAATTCAATAGTAGCCCGGCTTTAATATCCTATGAGTTTCTTTGGCAATAAAATGTTATAGGGTCCTTTTGGTGCATTGTCCCGGGAGAAAAATGGAAGTGTGCACAAGATCATTGTTTGGTAACGTGGAAGTTACCAACCCCATAACCCAAAATAGCATATAGATCACAAAGGCATTTGATTCTTATAAAGTATATCTACCCATGAAAGGGATTGCGATCTCTACTTCTTTCACTTCTGCTCGTCATGCTTCTCTGCCTTATCTTCCAACTACAACTCTACCTGCTGTGGAAGGTCCATCTGTTTCCTCACAGTTTGTCACGGCCCTCCCTTTATCTGACAGGCGGTGTGGACGAGGCCACTTTTGAAACCTTTTCCTTTGCTGTCCAACCATCAAATAGAAAGATCTTCTAATGCAGAAGAAAAAGTCCCAAGAAGGGTCAGTCCAGATGCAAAATTTTTCCAGAACAATCACAAACGCATCAATGATGATCAGGATGAGCGACTTGATGAGAGTTCATAAGGACCTCACCAGCTTCCCATCTATTAAATGTGATTTGTGATTTGATCTGTTGATGGTTGGATAATCATTGTCATATATGGTTAACTGGGGGGATTGGTGCCTTTGAGAGAGCTCATTTTGTTAGTCACACCAAAGGCATGTTCCAAGCTAGTGTCTGTTGATCACAATCTCCTGTCCCTTTTGAAGGAAACCTTTTAAACTCTTAATATTAGATGACATATCTGATTTATTGTTCTATCAAAATACTCATCAAGGCTTGGTTTGCAGGATACGTGGGAGGATGTTGACCCAGATGAACTGTCATACGAGGTGAGTTTGGTCTGATGGAGTGATGCCCATGCGTTATAATTGTTTGTTCTTGAGAGGATAATTAATATTTCAGGAGTTGCTCGCATTGGGTGAAGTGGTAGGAACTGAGAGCAGAGGGCTATCTGCTGATACAATTGCTTCCTTACCCTCCATAAACTTCAAGGCAGGGAGCGGTCAGACTGGAAGCAATGATTCGTGAGTGATTTGAAGCACAGCTTTGGTTTTCTTTACCATCCATGTCTTATTTACTTAGCTTTTGGCTCTCATTTCTCAGATGTGTCATTTGTCGGTTGGATTTCGAGGACGATGAAACCCTGACTGTTCTTTCCTGCAAACACTCCTACCATTCGGAGTGCATAAATAATTGGTTAAAAATAAATAAGGTATGCCATTTTTACATGAGCCTACCTATCAGCAAGGATTATTGTTTCTTTCTCCTGAAACTTCTGTTCTCCACCCCCTAAACTGCGATGTCGACGATACTTTTGTGCTTTGCATCGATGCCAACAATAACGTACATATGGCTACTACCGATAGCAGTGATATCTAAAGCTTGCTGCTGCTTTTGTACAGGTCTGCCCTGTTTGCAGTGCTGAAGTGTGTTCTACAGCTGGTGGGAGCAGTTAAGTTAGTTGTAGCATGTGCTATGGAATGTACCAAAATCAACATCTCACGAAGTTAAACGACGAAGGATTTTAATTTTTGTTTTGTTTCTTTTATAATGATTTTGCATACCCATTTCAGTTCAAGCCAAGGTATCATCATCATCATCATGTGAATCTCTAAGGTATCACTTCATCCAAATTTGATGCTCTTGGGATGTGAATCCTATGAATAAGAATTCATAGGGTTTGTACTACTTTTGAGCAACTACTTCCACTCCTCCATGTATATGATATCATATACAACTCACTCCACTTGATACTATTGTTGAAAACTATTTCTAACCCATGTTTTTTTTTTTTTTTAACTTTAATCAAAATTTAATTGGACAATAAATCGTT

mRNA sequence

ACTATTTATCAAAAAAAGAAAAAGGGAAAACAAATTCTTATTTTCTATATTTGTTTATTTTGAAATAATAATAAAAATAGAAAAAAGAAAAAAGAAAAAAGAAAAAGGTGCGTCTGTTTGTTTGTTCTTGCTCGGCTCTAAAAAATTATATAATCTTCGTCGTGTTCTTAGATTCTTCTGTTACTATTAATTTTTTTCTTCTCTGAAATATTTGATTCTCCTTCTCCTAATTCCTCATAGCATCTCTTTTCCATCTTCCATTTGTCAAATCCAAATCTCCCTTTTCTCTCAAACCTCAATCTCCTTCTTTTATGGAGAACGAAGCCACCACTAACGCCACCAAACTTGGTTTTGATGGAGTCAAGCCACCGCCCACCACTGCCACCACTGCCACCACCGCCACCACCGCCCCCTCCGACCTTGAACATAACCCTAATTCCAATTCATCGCCATCGTCTGCAGACCCCCACAATGAGACTACTGGATCCGACTCCACTTCTCGCCAATCCGCTAGAACTCCCTTCACTAACCTCAACCAGGTCGATGCTGACCTTGCCCTCGCACGTACCCTTCAAGAACAGGAAAGGGCATACCTGAGGCTTAGAATGGTGAGTATGGGGATTGATTTTGGAAGTTGGGAAGGTGGAAGTTATGCATTAGATGACGAGGACAGTTTTGGTGATTTGCACGATCATACAGAATCTGATGGAGATGAGGAGGAGGAGGAGGAGTTTGATGGAACAGATGTCAATGACGACGACGATGTGTTTGATGTGCATGCTCGTGAAGATGGTGGAGAGCATAGCAACCCCAGCTTTGAACTTGATCCTGGTAATTTTTCGAGTGACGAGGCTTATGCTAGAGCCTTACAAGATTCTGAAGACAGGGAAATGGCTGCTAGATTGATGGCCCTTGCTGGATTACATGATGAGGAAGCAGATGACACAGATGATCAAGGCGAAAATTCTCAGGATACGTGGGAGGATGTTGACCCAGATGAACTGTCATACGAGGAGTTGCTCGCATTGGGTGAAGTGGTAGGAACTGAGAGCAGAGGGCTATCTGCTGATACAATTGCTTCCTTACCCTCCATAAACTTCAAGGCAGGGAGCGGTCAGACTGGAAGCAATGATTCATGTGTCATTTGTCGGTTGGATTTCGAGGACGATGAAACCCTGACTGTTCTTTCCTGCAAACACTCCTACCATTCGGAGTGCATAAATAATTGGTTAAAAATAAATAAGGTCTGCCCTGTTTGCAGTGCTGAAGTGTGTTCTACAGCTGGTGGGAGCAGTTAAGTTAGTTGTAGCATGTGCTATGGAATGTACCAAAATCAACATCTCACGAAGTTAAACGACGAAGGATTTTAATTTTTGTTTTGTTTCTTTTATAATGATTTTGCATACCCATTTCAGTTCAAGCCAAGGTATCATCATCATCATCATGTGAATCTCTAAGGTATCACTTCATCCAAATTTGATGCTCTTGGGATGTGAATCCTATGAATAAGAATTCATAGGGTTTGTACTACTTTTGAGCAACTACTTCCACTCCTCCATGTATATGATATCATATACAACTCACTCCACTTGATACTATTGTTGAAAACTATTTCTAACCCATGTTTTTTTTTTTTTTTAACTTTAATCAAAATTTAATTGGACAATAAATCGTT

Coding sequence (CDS)

ATGGAGAACGAAGCCACCACTAACGCCACCAAACTTGGTTTTGATGGAGTCAAGCCACCGCCCACCACTGCCACCACTGCCACCACCGCCACCACCGCCCCCTCCGACCTTGAACATAACCCTAATTCCAATTCATCGCCATCGTCTGCAGACCCCCACAATGAGACTACTGGATCCGACTCCACTTCTCGCCAATCCGCTAGAACTCCCTTCACTAACCTCAACCAGGTCGATGCTGACCTTGCCCTCGCACGTACCCTTCAAGAACAGGAAAGGGCATACCTGAGGCTTAGAATGGTGAGTATGGGGATTGATTTTGGAAGTTGGGAAGGTGGAAGTTATGCATTAGATGACGAGGACAGTTTTGGTGATTTGCACGATCATACAGAATCTGATGGAGATGAGGAGGAGGAGGAGGAGTTTGATGGAACAGATGTCAATGACGACGACGATGTGTTTGATGTGCATGCTCGTGAAGATGGTGGAGAGCATAGCAACCCCAGCTTTGAACTTGATCCTGGTAATTTTTCGAGTGACGAGGCTTATGCTAGAGCCTTACAAGATTCTGAAGACAGGGAAATGGCTGCTAGATTGATGGCCCTTGCTGGATTACATGATGAGGAAGCAGATGACACAGATGATCAAGGCGAAAATTCTCAGGATACGTGGGAGGATGTTGACCCAGATGAACTGTCATACGAGGAGTTGCTCGCATTGGGTGAAGTGGTAGGAACTGAGAGCAGAGGGCTATCTGCTGATACAATTGCTTCCTTACCCTCCATAAACTTCAAGGCAGGGAGCGGTCAGACTGGAAGCAATGATTCATGTGTCATTTGTCGGTTGGATTTCGAGGACGATGAAACCCTGACTGTTCTTTCCTGCAAACACTCCTACCATTCGGAGTGCATAAATAATTGGTTAAAAATAAATAAGGTCTGCCCTGTTTGCAGTGCTGAAGTGTGTTCTACAGCTGGTGGGAGCAGTTAA

Protein sequence

MENEATTNATKLGFDGVKPPPTTATTATTATTAPSDLEHNPNSNSSPSSADPHNETTGSDSTSRQSARTPFTNLNQVDADLALARTLQEQERAYLRLRMVSMGIDFGSWEGGSYALDDEDSFGDLHDHTESDGDEEEEEEFDGTDVNDDDDVFDVHAREDGGEHSNPSFELDPGNFSSDEAYARALQDSEDREMAARLMALAGLHDEEADDTDDQGENSQDTWEDVDPDELSYEELLALGEVVGTESRGLSADTIASLPSINFKAGSGQTGSNDSCVICRLDFEDDETLTVLSCKHSYHSECINNWLKINKVCPVCSAEVCSTAGGSS

Homology

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BLAST of CmaCh04G002850 vs. Swiss-Prot
Match: BBR_ARATH (E3 ubiquitin ligase BIG BROTHER-related OS=Arabidopsis thaliana GN=BBR PE=2 SV=1)

HSP 1 Score: 281.6 bits (719), Expect = 1.1e-74
Identity = 178/326 (54.60%), Postives = 220/326 (67.48%), Query Frame = 1


Query: 9   ATKLGFDGVKPPPTTATTATTATTAPSDLEHNPNSNSSPSSADPHNETTGSDSTSR---- 68
           ATK+     + P    T   + T + S+        S+ + A P  E+ GS S       
Sbjct: 21  ATKINETDGRLPENRQTGVVSDTGSGSERGEQGVGESAVAVAVPVEES-GSISVGELPAP 80

Query: 69  --QSARTPFTNLNQVDADLALARTLQEQERAYLRLRMVSMGIDFGSWEGGSYALDDEDSF 128
              SAR PFTNL+Q+DADLALARTLQEQERAY+ L M S   D+GSWE GSY  D ED F
Sbjct: 81  RSSSARVPFTNLSQIDADLALARTLQEQERAYMMLTMNSEISDYGSWETGSYVYD-EDEF 140

Query: 129 GDLHDHTESDGDEEEEEEFDGTDVNDDDDVFDVHAREDGGEHSNPSFELDPGNFSSDEAY 188
            D     E + D+E+E E D     D  DV +VHA ED  E    S +++   ++ DEAY
Sbjct: 141 DD--PENEDEDDDEDEYETDDDPQEDGLDV-NVHANEDDQEDDGNS-DIEEVAYTDDEAY 200

Query: 189 ARALQDSEDREMAARLMALAGLHDEEADDTDDQGENSQDTWEDVDPDELSYEELLALGEV 248
           ARALQ++E+R+MAARL AL+GL +   +D +D+   SQD W+++DPDELSYEELLALG++
Sbjct: 201 ARALQEAEERDMAARLSALSGLANRVVEDLEDESHTSQDAWDEMDPDELSYEELLALGDI 260

Query: 249 VGTESRGLSADTIASLPSINFKAGSGQTGSNDSCVICRLDFEDDETLTVLSCKHSYHSEC 308
           VGTESRGLSADTIASLPS  +K G  Q G+N+SCVICRLD+EDDE L +L CKHSYHSEC
Sbjct: 261 VGTESRGLSADTIASLPSKRYKEGDNQNGTNESCVICRLDYEDDEDLILLPCKHSYHSEC 320

Query: 309 INNWLKINKVCPVCSAEVCSTAGGSS 329
           INNWLKINKVCPVCSAEV ++  G S
Sbjct: 321 INNWLKINKVCPVCSAEVSTSTSGQS 340

[Close]

BLAST of CmaCh04G002850 vs. Swiss-Prot
Match: BB_ARATH (E3 ubiquitin ligase BIG BROTHER OS=Arabidopsis thaliana GN=BB PE=1 SV=1)

HSP 1 Score: 112.8 bits (281), Expect = 6.9e-24
Identity = 62/144 (43.06%), Postives = 88/144 (61.11%), Query Frame = 1


Query: 179 DEAYARALQDSEDREMAARLMALAGLHDEEADDTDDQGENSQDTWEDVDPDELSYEELLA 238
           +   AR++Q  +  E +     +A  HD ++     Q        +D+DPD ++YEEL+ 
Sbjct: 106 ENTVARSVQIGDTDEHSEAEECIANEHDPDSPQVSWQ--------DDIDPDTMTYEELVE 165

Query: 239 LGEVVGTESRGLSADTIASLPSINFKAGS--GQTGSNDSCVICRLDFEDDETLTVLSCKH 298
           LGE VGTESRGLS + I +LP+  +K GS   +  + + CVIC+L ++  E    L CKH
Sbjct: 166 LGEAVGTESRGLSQELIETLPTKKYKFGSIFSRKRAGERCVICQLKYKIGERQMNLPCKH 225

Query: 299 SYHSECINNWLKINKVCPVCSAEV 321
            YHSECI+ WL INKVCPVC++EV
Sbjct: 226 VYHSECISKWLSINKVCPVCNSEV 241

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BLAST of CmaCh04G002850 vs. Swiss-Prot
Match: RNF44_HUMAN (RING finger protein 44 OS=Homo sapiens GN=RNF44 PE=2 SV=1)

HSP 1 Score: 79.0 bits (193), Expect = 1.1e-13
Identity = 42/97 (43.30%), Postives = 58/97 (59.79%), Query Frame = 1


Query: 225 DVDPDEL-SYEELLALGEVVG-TESRGLSADTIASLPSINFKAGSGQTGSNDSCVICRLD 284
           DVD  E+ +YE LL L E +G  + RGL+   I  LPS  F   S Q+     CV+C  D
Sbjct: 328 DVDDVEMENYEALLNLAERLGDAKPRGLTKADIEQLPSYRFNPDSHQS-EQTLCVVCFSD 387

Query: 285 FEDDETLTVLSCKHSYHSECINNWLKINKVCPVCSAE 320
           FE  + L VL C H +H++C++ WLK N+ CP+C A+
Sbjct: 388 FEARQLLRVLPCNHEFHTKCVDKWLKANRTCPICRAD 423

[Close]

BLAST of CmaCh04G002850 vs. Swiss-Prot
Match: RNF38_HUMAN (E3 ubiquitin-protein ligase RNF38 OS=Homo sapiens GN=RNF38 PE=1 SV=4)

HSP 1 Score: 79.0 bits (193), Expect = 1.1e-13
Identity = 40/97 (41.24%), Postives = 58/97 (59.79%), Query Frame = 1


Query: 225 DVDPDEL-SYEELLALGEVVG-TESRGLSADTIASLPSINFKAGSGQTGSNDSCVICRLD 284
           DV+  E+ +YE LL L E +G  + RGL+   I  LPS  F   + Q+     CV+C  D
Sbjct: 411 DVEDGEVENYEALLNLAERLGEAKPRGLTKADIEQLPSYRFNPNNHQS-EQTLCVVCMCD 470

Query: 285 FEDDETLTVLSCKHSYHSECINNWLKINKVCPVCSAE 320
           FE  + L VL C H +H++C++ WLK N+ CP+C A+
Sbjct: 471 FESRQLLRVLPCNHEFHAKCVDKWLKANRTCPICRAD 506

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BLAST of CmaCh04G002850 vs. Swiss-Prot
Match: RNF44_RAT (RING finger protein 44 OS=Rattus norvegicus GN=Rnf44 PE=2 SV=1)

HSP 1 Score: 78.6 bits (192), Expect = 1.4e-13
Identity = 42/97 (43.30%), Postives = 58/97 (59.79%), Query Frame = 1


Query: 225 DVDPDEL-SYEELLALGEVVG-TESRGLSADTIASLPSINFKAGSGQTGSNDSCVICRLD 284
           DVD  E+ +YE LL L E +G  + RGL+   I  LPS  F   S Q+     CV+C  D
Sbjct: 246 DVDDVEMENYEALLNLAERLGDAKPRGLTKADIEQLPSYRFNPDSHQS-EQTLCVVCFSD 305

Query: 285 FEDDETLTVLSCKHSYHSECINNWLKINKVCPVCSAE 320
           FE  + L VL C H +H++C++ WLK N+ CP+C A+
Sbjct: 306 FEVRQLLRVLPCNHEFHAKCVDKWLKANRTCPICRAD 341

[Close]

BLAST of CmaCh04G002850 vs. TrEMBL
Match: A0A0A0KL96_CUCSA (Uncharacterized protein OS=Cucumis sativus GN=Csa_5G175690 PE=4 SV=1)

HSP 1 Score: 482.3 bits (1240), Expect = 4.8e-133
Identity = 268/338 (79.29%), Postives = 286/338 (84.62%), Query Frame = 1


Query: 1   MENEA--TTNATKLGFDGVKPPPTTATTATTATTAPSDLEHNPNSNSSP---SSADPHNE 60
           MENEA  TT +TKLG DGVKP P           A SD + NPNSNS+P   S +DP N+
Sbjct: 1   MENEAATTTTSTKLGSDGVKPTPA----------ASSDNDQNPNSNSNPPPTSLSDPQND 60

Query: 61  TTGSDSTS-----RQSARTPFTNLNQVDADLALARTLQEQERAYLRLRMVSMGIDFGSWE 120
           TTGSDSTS     R S+RTPFTNL QVDADLALARTLQEQERAYL LRM S G DFGSWE
Sbjct: 61  TTGSDSTSLQTPSRHSSRTPFTNLTQVDADLALARTLQEQERAYLMLRMTSEGSDFGSWE 120

Query: 121 GGSYALDDEDSFGDLHDHTESDGDEEEEEEFDGTDVNDDDDVFDVHAREDGGEHSNPSFE 180
            GSY LDDED FGD HDHTESDGD++E    DGTDVNDD+DVFDVHA EDGGEH+N +FE
Sbjct: 121 AGSYVLDDEDGFGDPHDHTESDGDDDE----DGTDVNDDEDVFDVHAHEDGGEHNNSNFE 180

Query: 181 LDPGNFSSDEAYARALQDSEDREMAARLMALAGLHDEEADDTDDQGENSQDTWEDVDPDE 240
           LDPGNFSSDEAYARALQD+EDREMAARL+ALA L D++ADDTDDQGENSQDTWEDVDPDE
Sbjct: 181 LDPGNFSSDEAYARALQDAEDREMAARLLALARLQDQDADDTDDQGENSQDTWEDVDPDE 240

Query: 241 LSYEELLALGEVVGTESRGLSADTIASLPSINFKAGSGQTGSNDSCVICRLDFEDDETLT 300
           LSYEELLALGEVVGTESRGLSADTIASLPSINFKAGS QTGSNDSCVICRLDFED ETLT
Sbjct: 241 LSYEELLALGEVVGTESRGLSADTIASLPSINFKAGSDQTGSNDSCVICRLDFEDGETLT 300

Query: 301 VLSCKHSYHSECINNWLKINKVCPVCSAEVCSTAGGSS 329
           VLSCKHSYHS+C+ NWLKINK+CPVCSAEV STA GSS
Sbjct: 301 VLSCKHSYHSDCVTNWLKINKICPVCSAEV-STATGSS 323

[Close]

BLAST of CmaCh04G002850 vs. TrEMBL
Match: A0A061E229_THECC (RING/U-box superfamily protein OS=Theobroma cacao GN=TCM_007711 PE=4 SV=1)

HSP 1 Score: 370.5 bits (950), Expect = 2.0e-99
Identity = 204/303 (67.33%), Postives = 239/303 (78.88%), Query Frame = 1


Query: 31  TTAPSDLEHNPNSNSSPS------SADPHNETTGSDSTSRQSARTPFTNLNQVDADLALA 90
           ++ P + E NPN N + +        +   E    + T + S RTPFTNL+QVDADLALA
Sbjct: 91  SSEPKEQEPNPNGNDNDNLNNESEHVEREEEEEEEEDTRQSSTRTPFTNLSQVDADLALA 150

Query: 91  RTLQEQERAYLRLRMVSMGIDFGSWEGGSYALDDEDSFGDLHDHTESDGDEEE-EEEFDG 150
           RTLQEQERAY+ LRM + G D+GSWE GSY  DD+D FGD HDH ++DGDEEE EEE+DG
Sbjct: 151 RTLQEQERAYMMLRMNNDGSDYGSWEAGSYLHDDDDDFGDPHDHDDTDGDEEEDEEEYDG 210

Query: 151 TDVNDDDDVFDVHAREDGGEHS-NPSFELDPGNFSSDEAYARALQDSEDREMAARLMALA 210
           T  +DD D FDVHA  + GE   NP+ E +P  FSSDEAYARALQD+E+REMAARL+ALA
Sbjct: 211 TAADDDVDAFDVHAHAENGEEDYNPNVEFNPAVFSSDEAYARALQDAEEREMAARLLALA 270

Query: 211 GLHDEEADDTDDQGENSQDTWEDVDPDELSYEELLALGEVVGTESRGLSADTIASLPSIN 270
           GL+D      +D G NSQDTWE+VDPDELSYEELLALGEVVGTESRGLSAD+IASLPS+ 
Sbjct: 271 GLNDRGIVTLEDHGGNSQDTWEEVDPDELSYEELLALGEVVGTESRGLSADSIASLPSVT 330

Query: 271 FKAGSGQTGSNDSCVICRLDFEDDETLTVLSCKHSYHSECINNWLKINKVCPVCSAEVCS 326
           +KAGS QTGSNDSCV+CR+D+ED ++LTVLSCKHSYH ECINNWLKINKVCPVCSAEV S
Sbjct: 331 YKAGSSQTGSNDSCVVCRVDYEDGDSLTVLSCKHSYHPECINNWLKINKVCPVCSAEV-S 390

[Close]

BLAST of CmaCh04G002850 vs. TrEMBL
Match: M5VR71_PRUPE (Uncharacterized protein OS=Prunus persica GN=PRUPE_ppa008876mg PE=4 SV=1)

HSP 1 Score: 367.5 bits (942), Expect = 1.7e-98
Identity = 201/301 (66.78%), Postives = 234/301 (77.74%), Query Frame = 1


Query: 35  SDLEHNPNSNSSPSSADPHNETTGSDSTS--------RQSARTPFTNLNQVDADLALART 94
           S+ E NPN N      +   E T   S           QS+RTPFTNL+QVDADLALART
Sbjct: 23  SEQEQNPNLNQCE---EQEQEVTTESSQLVDPPSPPVPQSSRTPFTNLSQVDADLALART 82

Query: 95  LQEQERAYLRLRMVSMGIDFGSWEGGSYALDDEDSFGDLHDHTESDGDEEEEEEFDGTDV 154
           LQEQERAY+ LRM +   D+GSWE GSY  +DED F D HD T+   D ++EE++DGT+V
Sbjct: 83  LQEQERAYMMLRMNNEDSDYGSWEAGSYVHEDEDDFNDFHDDTD---DNDDEEQYDGTEV 142

Query: 155 NDDDDVFDVHAREDGGEHSNPSFELDPGNFSSDEAYARALQDSEDREMAARLMALAGLHD 214
           ++D+D FDVH  +D GE  NP  E DP  FSSDEAYARALQD+EDREMAARLMALAG++D
Sbjct: 143 DNDEDAFDVHGHDDAGEDDNPRVEYDPAVFSSDEAYARALQDAEDREMAARLMALAGIND 202

Query: 215 EEADDTDDQGENSQDTWEDVDPDELSYEELLALGEVVGTESRGLSADTIASLPSINFKAG 274
            E + T++ G NSQDTWE+VDPDELSYEEL+ALGEVVGTESRGLSADTIASLPS+++K G
Sbjct: 203 REVEHTEEHGGNSQDTWEEVDPDELSYEELIALGEVVGTESRGLSADTIASLPSVSYKTG 262

Query: 275 SGQTGSNDSCVICRLDFEDDETLTVLSCKHSYHSECINNWLKINKVCPVCSAEVCSTAGG 328
           SGQ GSN+SCVICRLD+E  E LT+LSCKHSYHSECINNWL INKVCPVCSAEV ST+G 
Sbjct: 263 SGQNGSNESCVICRLDYEAGENLTILSCKHSYHSECINNWLTINKVCPVCSAEV-STSGN 316

[Close]

BLAST of CmaCh04G002850 vs. TrEMBL
Match: A0A067L0A6_JATCU (Uncharacterized protein OS=Jatropha curcas GN=JCGZ_05968 PE=4 SV=1)

HSP 1 Score: 366.3 bits (939), Expect = 3.9e-98
Identity = 201/292 (68.84%), Postives = 232/292 (79.45%), Query Frame = 1


Query: 35  SDLEHNPNSNSSPSSADPHN---ETTGSDSTSRQSARTPFTNLNQVDADLALARTLQEQE 94
           S+ E     N +  SA+ +N   E   +    + S RTPFTNL+QVDADLALARTLQEQE
Sbjct: 24  SEREQEQEQNLNLGSANDNNGDEEEQEAQPPRQSSRRTPFTNLSQVDADLALARTLQEQE 83

Query: 95  RAYLRLRMVSMGIDFGSWEGGSYALDDEDSFGDLHDHTESDGDEEEEEEFDGTDVNDDDD 154
           RAY+ LR  + G D+GSWE GSY  DDED FGD  D ++ D D+EEEEE DGTDV+D  D
Sbjct: 84  RAYMMLRFGNEGSDYGSWEAGSYFPDDEDDFGDPDDDSDGDDDDEEEEE-DGTDVDDSMD 143

Query: 155 VFDVHAREDGGEHSNPSFELDPGNFSSDEAYARALQDSEDREMAARLMALAGLHDEEADD 214
            FDVHA  D    +NP+ +LDP  FSSDEAYARALQD+E+REMAARL+ALAG+++ E +D
Sbjct: 144 AFDVHAHTDADVDNNPAVDLDPAMFSSDEAYARALQDAEEREMAARLLALAGINEREVED 203

Query: 215 TDDQGENSQDTWEDVDPDELSYEELLALGEVVGTESRGLSADTIASLPSINFKAGSGQTG 274
            +D G NSQD WE+VDPDELSYEELLALGEVVGTESRGLSADTIASLPS+NFKAGS Q G
Sbjct: 204 VEDLGANSQDAWEEVDPDELSYEELLALGEVVGTESRGLSADTIASLPSVNFKAGSSQNG 263

Query: 275 SNDSCVICRLDFEDDETLTVLSCKHSYHSECINNWLKINKVCPVCSAEVCST 324
           SNDSCVICRLD++D ETLTVLSCKHSYHSECIN+WLKINKVCPVCS EV S+
Sbjct: 264 SNDSCVICRLDYDDGETLTVLSCKHSYHSECINDWLKINKVCPVCSKEVSSS 314

[Close]

BLAST of CmaCh04G002850 vs. TrEMBL
Match: A0A0D2RJ35_GOSRA (Uncharacterized protein OS=Gossypium raimondii GN=B456_005G211500 PE=4 SV=1)

HSP 1 Score: 356.7 bits (914), Expect = 3.1e-95
Identity = 206/325 (63.38%), Postives = 241/325 (74.15%), Query Frame = 1


Query: 38  EHNPNSNSSPSSADPHNETTGSDSTSRQ---------------------SARTPFTNLNQ 97
           E  PNSN +P+     NE   ++S   +                     S RTPFTNL+Q
Sbjct: 9   EQEPNSNPNPNGNGNGNENLNTESEHEERQEDSQEQEQEQEREQPPRQSSTRTPFTNLSQ 68

Query: 98  VDADLALARTLQEQERAYLRLRMVSMG-IDFGSWEGGSYALDDEDS--FGDLHDHTESDG 157
           VDADLALARTLQEQERAY+ LRM + G  D+GSWE GSY  DD+D   FGD HDH  +DG
Sbjct: 69  VDADLALARTLQEQERAYMMLRMNNDGGSDYGSWEAGSYLHDDDDDDDFGDPHDHDITDG 128

Query: 158 DEEEE----------EEFDGTDVNDDDDVFDVHAR-EDGGEHSNPSFELDPGNFSSDEAY 217
           D+E+E          EE+DGTD +DD+D FDVHA  EDG E +NPS ELDP  FSSDEA+
Sbjct: 129 DDEDEDDGEQEDEDEEEYDGTDADDDEDAFDVHAHAEDGDEDNNPSAELDPAAFSSDEAF 188

Query: 218 ARALQDSEDREMAARLMALAGLHDEEADDTDDQGENSQDTWEDVDPDELSYEELLALGEV 277
           ARALQD+E+REMAARL+ALAG++D      +D G +SQDTWE+VDPDELSYEELLALGEV
Sbjct: 189 ARALQDAEEREMAARLLALAGINDRGIFTLEDHGGHSQDTWEEVDPDELSYEELLALGEV 248

Query: 278 VGTESRGLSADTIASLPSINFKAGSGQTGSNDSCVICRLDFEDDETLTVLSCKHSYHSEC 328
           VGTESRGLSAD++ASLPSI +KAGS QTGSNDSCVICR+D++D ++LTVLSCKHSYH EC
Sbjct: 249 VGTESRGLSADSLASLPSIKYKAGSSQTGSNDSCVICRVDYDDGDSLTVLSCKHSYHPEC 308

[Close]

BLAST of CmaCh04G002850 vs. TAIR10
Match: AT3G19910.1 (AT3G19910.1 RING/U-box superfamily protein)

HSP 1 Score: 281.6 bits (719), Expect = 6.3e-76
Identity = 178/326 (54.60%), Postives = 220/326 (67.48%), Query Frame = 1


Query: 9   ATKLGFDGVKPPPTTATTATTATTAPSDLEHNPNSNSSPSSADPHNETTGSDSTSR---- 68
           ATK+     + P    T   + T + S+        S+ + A P  E+ GS S       
Sbjct: 21  ATKINETDGRLPENRQTGVVSDTGSGSERGEQGVGESAVAVAVPVEES-GSISVGELPAP 80

Query: 69  --QSARTPFTNLNQVDADLALARTLQEQERAYLRLRMVSMGIDFGSWEGGSYALDDEDSF 128
              SAR PFTNL+Q+DADLALARTLQEQERAY+ L M S   D+GSWE GSY  D ED F
Sbjct: 81  RSSSARVPFTNLSQIDADLALARTLQEQERAYMMLTMNSEISDYGSWETGSYVYD-EDEF 140

Query: 129 GDLHDHTESDGDEEEEEEFDGTDVNDDDDVFDVHAREDGGEHSNPSFELDPGNFSSDEAY 188
            D     E + D+E+E E D     D  DV +VHA ED  E    S +++   ++ DEAY
Sbjct: 141 DD--PENEDEDDDEDEYETDDDPQEDGLDV-NVHANEDDQEDDGNS-DIEEVAYTDDEAY 200

Query: 189 ARALQDSEDREMAARLMALAGLHDEEADDTDDQGENSQDTWEDVDPDELSYEELLALGEV 248
           ARALQ++E+R+MAARL AL+GL +   +D +D+   SQD W+++DPDELSYEELLALG++
Sbjct: 201 ARALQEAEERDMAARLSALSGLANRVVEDLEDESHTSQDAWDEMDPDELSYEELLALGDI 260

Query: 249 VGTESRGLSADTIASLPSINFKAGSGQTGSNDSCVICRLDFEDDETLTVLSCKHSYHSEC 308
           VGTESRGLSADTIASLPS  +K G  Q G+N+SCVICRLD+EDDE L +L CKHSYHSEC
Sbjct: 261 VGTESRGLSADTIASLPSKRYKEGDNQNGTNESCVICRLDYEDDEDLILLPCKHSYHSEC 320

Query: 309 INNWLKINKVCPVCSAEVCSTAGGSS 329
           INNWLKINKVCPVCSAEV ++  G S
Sbjct: 321 INNWLKINKVCPVCSAEVSTSTSGQS 340

[Close]

BLAST of CmaCh04G002850 vs. TAIR10
Match: AT3G63530.1 (AT3G63530.1 RING/U-box superfamily protein)

HSP 1 Score: 112.8 bits (281), Expect = 3.9e-25
Identity = 62/144 (43.06%), Postives = 88/144 (61.11%), Query Frame = 1


Query: 179 DEAYARALQDSEDREMAARLMALAGLHDEEADDTDDQGENSQDTWEDVDPDELSYEELLA 238
           +   AR++Q  +  E +     +A  HD ++     Q        +D+DPD ++YEEL+ 
Sbjct: 106 ENTVARSVQIGDTDEHSEAEECIANEHDPDSPQVSWQ--------DDIDPDTMTYEELVE 165

Query: 239 LGEVVGTESRGLSADTIASLPSINFKAGS--GQTGSNDSCVICRLDFEDDETLTVLSCKH 298
           LGE VGTESRGLS + I +LP+  +K GS   +  + + CVIC+L ++  E    L CKH
Sbjct: 166 LGEAVGTESRGLSQELIETLPTKKYKFGSIFSRKRAGERCVICQLKYKIGERQMNLPCKH 225

Query: 299 SYHSECINNWLKINKVCPVCSAEV 321
            YHSECI+ WL INKVCPVC++EV
Sbjct: 226 VYHSECISKWLSINKVCPVCNSEV 241

[Close]

BLAST of CmaCh04G002850 vs. TAIR10
Match: AT3G47180.1 (AT3G47180.1 RING/U-box superfamily protein)

HSP 1 Score: 100.1 bits (248), Expect = 2.6e-21
Identity = 47/117 (40.17%), Postives = 78/117 (66.67%), Query Frame = 1


Query: 204 LHDEEADDTDDQGENSQDTWEDVDPDELSYEELLALGEVVGTESRGLSADTIASLPSINF 263
           L D+E++   ++ ++  +  +++DPD+LSYEEL+ALG+ +G E+RGL+   I++  + + 
Sbjct: 90  LEDQESNSNLEEEDDFLEEEDEIDPDQLSYEELIALGDFIGVENRGLTPIEISTCLNAST 149

Query: 264 KAGSGQTGSNDSCVICRLDFEDDETLTVL-SCKHSYHSECINNWLKINKVCPVCSAE 320
              S      D CV+C+++FE+ E+L VL  C H YHSECI  WL+  K+CP+C +E
Sbjct: 150 YVFSHNKNEIDRCVVCQMEFEERESLVVLRPCDHPYHSECITKWLETKKICPICCSE 206

[Close]

BLAST of CmaCh04G002850 vs. TAIR10
Match: AT3G15070.1 (AT3G15070.1 RING/U-box superfamily protein)

HSP 1 Score: 87.0 bits (214), Expect = 2.3e-17
Identity = 38/100 (38.00%), Postives = 60/100 (60.00%), Query Frame = 1


Query: 226 VDPDELSYEELLALGEVVGTESRGLSADTIASL------PSINFKAGSGQTGSNDSCVIC 285
           +D +++SYEELLAL + +GT   GLS++ +  L        IN + G       DSC IC
Sbjct: 372 LDIEDMSYEELLALSDQIGTVKTGLSSEDVKELLKRRTSTRINLEEGPSTDLETDSCTIC 431

Query: 286 RLDFEDDETLTVLSCKHSYHSECINNWLKINKVCPVCSAE 320
           + ++++++ +  L C H YH+EC+  WL I  VCP+C +E
Sbjct: 432 QENYKNEDKIATLDCMHKYHAECLKKWLVIKNVCPICKSE 471

[Close]

BLAST of CmaCh04G002850 vs. TAIR10
Match: AT1G53190.1 (AT1G53190.1 RING/U-box superfamily protein)

HSP 1 Score: 81.3 bits (199), Expect = 1.3e-15
Identity = 39/104 (37.50%), Postives = 59/104 (56.73%), Query Frame = 1


Query: 226 VDPDELSYEELLALGEVVGTESRGLSADTI------ASLPSINFKAGSGQTGSND----S 285
           +D +E+SYEELLAL E +GT + GL  + +       +   INF+  S    + D     
Sbjct: 382 LDIEEMSYEELLALSERIGTVNTGLPEEDVKNHLKTRTCSGINFEKESSSPRTKDLETEP 441

Query: 286 CVICRLDFEDDETLTVLSCKHSYHSECINNWLKINKVCPVCSAE 320
           C IC+  F+++E +  L C H YH+EC+  WL +  VCP+C +E
Sbjct: 442 CTICQESFKNEEKIATLDCGHEYHAECLEKWLIVKNVCPICKSE 485

[Close]

BLAST of CmaCh04G002850 vs. NCBI nr
Match: gi|659090191|ref|XP_008445883.1| (PREDICTED: E3 ubiquitin ligase BIG BROTHER-related [Cucumis melo])

HSP 1 Score: 486.1 bits (1250), Expect = 4.8e-134
Identity = 272/342 (79.53%), Postives = 287/342 (83.92%), Query Frame = 1


Query: 1   MENEA--TTNATKLGFDGVKPPPTTATTATTATTAPSDLEHNPNSNSSPSS-------AD 60
           MENEA  TT ATKLG DGVKP P           A SD + NPNSNS+ +S       +D
Sbjct: 1   MENEAATTTTATKLGSDGVKPTPA----------ASSDNDQNPNSNSNSNSNPPPTSVSD 60

Query: 61  PHNETTGSDSTS-----RQSARTPFTNLNQVDADLALARTLQEQERAYLRLRMVSMGIDF 120
           P N+TTGSDSTS     R S+RTPFTNL QVDADLALARTLQEQERAYL LRM S G DF
Sbjct: 61  PQNDTTGSDSTSLQTPSRHSSRTPFTNLTQVDADLALARTLQEQERAYLMLRMTSEGSDF 120

Query: 121 GSWEGGSYALDDEDSFGDLHDHTESDGDEEEEEEFDGTDVNDDDDVFDVHAREDGGEHSN 180
           GSWE GSY LDDED FGD HDHTESDGD   ++EFDGTDVND+DDVFDVHA EDGGEH+N
Sbjct: 121 GSWEAGSYVLDDEDGFGDPHDHTESDGD---DDEFDGTDVNDEDDVFDVHAHEDGGEHNN 180

Query: 181 PSFELDPGNFSSDEAYARALQDSEDREMAARLMALAGLHDEEADDTDDQGENSQDTWEDV 240
            +FELDPGNFSSDEAYARALQD+EDREMAARL+ALAGL D +ADDTDDQGENSQDTWEDV
Sbjct: 181 SNFELDPGNFSSDEAYARALQDAEDREMAARLLALAGLQDHDADDTDDQGENSQDTWEDV 240

Query: 241 DPDELSYEELLALGEVVGTESRGLSADTIASLPSINFKAGSGQTGSNDSCVICRLDFEDD 300
           DPDELSYEELLALGEVVGTESRGLSADTIASLPSINFKAGS QTGSNDSCVICRLDFED 
Sbjct: 241 DPDELSYEELLALGEVVGTESRGLSADTIASLPSINFKAGSDQTGSNDSCVICRLDFEDG 300

Query: 301 ETLTVLSCKHSYHSECINNWLKINKVCPVCSAEVCSTAGGSS 329
           ETLTVLSCKHSYHS+CI NWLKINKVCPVCSAEV STA GSS
Sbjct: 301 ETLTVLSCKHSYHSDCITNWLKINKVCPVCSAEV-STATGSS 328

[Close]

BLAST of CmaCh04G002850 vs. NCBI nr
Match: gi|449451741|ref|XP_004143619.1| (PREDICTED: E3 ubiquitin ligase BIG BROTHER-related [Cucumis sativus])

HSP 1 Score: 482.3 bits (1240), Expect = 6.9e-133
Identity = 268/338 (79.29%), Postives = 286/338 (84.62%), Query Frame = 1


Query: 1   MENEA--TTNATKLGFDGVKPPPTTATTATTATTAPSDLEHNPNSNSSP---SSADPHNE 60
           MENEA  TT +TKLG DGVKP P           A SD + NPNSNS+P   S +DP N+
Sbjct: 1   MENEAATTTTSTKLGSDGVKPTPA----------ASSDNDQNPNSNSNPPPTSLSDPQND 60

Query: 61  TTGSDSTS-----RQSARTPFTNLNQVDADLALARTLQEQERAYLRLRMVSMGIDFGSWE 120
           TTGSDSTS     R S+RTPFTNL QVDADLALARTLQEQERAYL LRM S G DFGSWE
Sbjct: 61  TTGSDSTSLQTPSRHSSRTPFTNLTQVDADLALARTLQEQERAYLMLRMTSEGSDFGSWE 120

Query: 121 GGSYALDDEDSFGDLHDHTESDGDEEEEEEFDGTDVNDDDDVFDVHAREDGGEHSNPSFE 180
            GSY LDDED FGD HDHTESDGD++E    DGTDVNDD+DVFDVHA EDGGEH+N +FE
Sbjct: 121 AGSYVLDDEDGFGDPHDHTESDGDDDE----DGTDVNDDEDVFDVHAHEDGGEHNNSNFE 180

Query: 181 LDPGNFSSDEAYARALQDSEDREMAARLMALAGLHDEEADDTDDQGENSQDTWEDVDPDE 240
           LDPGNFSSDEAYARALQD+EDREMAARL+ALA L D++ADDTDDQGENSQDTWEDVDPDE
Sbjct: 181 LDPGNFSSDEAYARALQDAEDREMAARLLALARLQDQDADDTDDQGENSQDTWEDVDPDE 240

Query: 241 LSYEELLALGEVVGTESRGLSADTIASLPSINFKAGSGQTGSNDSCVICRLDFEDDETLT 300
           LSYEELLALGEVVGTESRGLSADTIASLPSINFKAGS QTGSNDSCVICRLDFED ETLT
Sbjct: 241 LSYEELLALGEVVGTESRGLSADTIASLPSINFKAGSDQTGSNDSCVICRLDFEDGETLT 300

Query: 301 VLSCKHSYHSECINNWLKINKVCPVCSAEVCSTAGGSS 329
           VLSCKHSYHS+C+ NWLKINK+CPVCSAEV STA GSS
Sbjct: 301 VLSCKHSYHSDCVTNWLKINKICPVCSAEV-STATGSS 323

[Close]

BLAST of CmaCh04G002850 vs. NCBI nr
Match: gi|1012245374|ref|XP_015942058.1| (PREDICTED: E3 ubiquitin ligase BIG BROTHER-related [Arachis duranensis])

HSP 1 Score: 370.9 bits (951), Expect = 2.2e-99
Identity = 198/277 (71.48%), Postives = 226/277 (81.59%), Query Frame = 1


Query: 55  ETTGSDSTSRQSARTPFTNLNQVDADLALARTLQEQERAYLRLRMVSMGIDFGSWEGGSY 114
           E TGS   SRQ +RTPFTNL+QVDADLALARTLQEQERAY+ LRM + G D+GSWE GSY
Sbjct: 74  EQTGS--ASRQPSRTPFTNLSQVDADLALARTLQEQERAYMMLRMNNEGSDYGSWEAGSY 133

Query: 115 ALDDEDSFGDLHDHTESDGDEEEEEEFDGTDV---NDDDDVFDVHAREDGGEHSNPSFEL 174
             DD D F DLHD T+ D D+E++++ D  +    N+D+D FDVHA +D GEH NPS E 
Sbjct: 134 LHDDGDDFDDLHDGTDLDEDDEDDDDDDDDEEDYENEDEDAFDVHAHDDAGEHDNPSIEF 193

Query: 175 DPGNFSSDEAYARALQDSEDREMAARLMALAGLHDEEADDTDDQGENSQDTWEDVDPDEL 234
           DP  FSSDEAYARALQ++E+REMAARL+ALAG++D EA + +D G NSQD WEDVDPDEL
Sbjct: 194 DPDVFSSDEAYARALQEAEEREMAARLLALAGINDREAGEAEDHGANSQDAWEDVDPDEL 253

Query: 235 SYEELLALGEVVGTESRGLSADTIASLPSINFKAGSGQTGSNDSCVICRLDFEDDETLTV 294
           SYEELLALGEVVGTESRGLS DT+A LPSI FK GS Q GSNDSCVICR+D+EDDE+LTV
Sbjct: 254 SYEELLALGEVVGTESRGLSTDTLAGLPSIKFKTGSDQHGSNDSCVICRMDYEDDESLTV 313

Query: 295 LSCKHSYHSECINNWLKINKVCPVCSAEVCSTAGGSS 329
           LSCKH YH ECINNWLKINKVCPVCS EV  +A GSS
Sbjct: 314 LSCKHLYHPECINNWLKINKVCPVCSTEV--SASGSS 346

[Close]

BLAST of CmaCh04G002850 vs. NCBI nr
Match: gi|590689562|ref|XP_007043263.1| (RING/U-box superfamily protein [Theobroma cacao])

HSP 1 Score: 370.5 bits (950), Expect = 2.9e-99
Identity = 204/303 (67.33%), Postives = 239/303 (78.88%), Query Frame = 1


Query: 31  TTAPSDLEHNPNSNSSPS------SADPHNETTGSDSTSRQSARTPFTNLNQVDADLALA 90
           ++ P + E NPN N + +        +   E    + T + S RTPFTNL+QVDADLALA
Sbjct: 91  SSEPKEQEPNPNGNDNDNLNNESEHVEREEEEEEEEDTRQSSTRTPFTNLSQVDADLALA 150

Query: 91  RTLQEQERAYLRLRMVSMGIDFGSWEGGSYALDDEDSFGDLHDHTESDGDEEE-EEEFDG 150
           RTLQEQERAY+ LRM + G D+GSWE GSY  DD+D FGD HDH ++DGDEEE EEE+DG
Sbjct: 151 RTLQEQERAYMMLRMNNDGSDYGSWEAGSYLHDDDDDFGDPHDHDDTDGDEEEDEEEYDG 210

Query: 151 TDVNDDDDVFDVHAREDGGEHS-NPSFELDPGNFSSDEAYARALQDSEDREMAARLMALA 210
           T  +DD D FDVHA  + GE   NP+ E +P  FSSDEAYARALQD+E+REMAARL+ALA
Sbjct: 211 TAADDDVDAFDVHAHAENGEEDYNPNVEFNPAVFSSDEAYARALQDAEEREMAARLLALA 270

Query: 211 GLHDEEADDTDDQGENSQDTWEDVDPDELSYEELLALGEVVGTESRGLSADTIASLPSIN 270
           GL+D      +D G NSQDTWE+VDPDELSYEELLALGEVVGTESRGLSAD+IASLPS+ 
Sbjct: 271 GLNDRGIVTLEDHGGNSQDTWEEVDPDELSYEELLALGEVVGTESRGLSADSIASLPSVT 330

Query: 271 FKAGSGQTGSNDSCVICRLDFEDDETLTVLSCKHSYHSECINNWLKINKVCPVCSAEVCS 326
           +KAGS QTGSNDSCV+CR+D+ED ++LTVLSCKHSYH ECINNWLKINKVCPVCSAEV S
Sbjct: 331 YKAGSSQTGSNDSCVVCRVDYEDGDSLTVLSCKHSYHPECINNWLKINKVCPVCSAEV-S 390

[Close]

BLAST of CmaCh04G002850 vs. NCBI nr
Match: gi|1021569400|ref|XP_016175913.1| (PREDICTED: E3 ubiquitin ligase BIG BROTHER-related [Arachis ipaensis])

HSP 1 Score: 370.5 bits (950), Expect = 2.9e-99
Identity = 197/275 (71.64%), Postives = 226/275 (82.18%), Query Frame = 1


Query: 55  ETTGSDSTSRQSARTPFTNLNQVDADLALARTLQEQERAYLRLRMVSMGIDFGSWEGGSY 114
           E TGS   SRQ +RTPFTNL+QVDADLALARTLQEQERAY+ LRM + G D+GSWE GSY
Sbjct: 74  EQTGS--ASRQPSRTPFTNLSQVDADLALARTLQEQERAYMMLRMNNEGSDYGSWEAGSY 133

Query: 115 ALDDEDSFGDLHDHTESDGDEEEEEEFDGTDV-NDDDDVFDVHAREDGGEHSNPSFELDP 174
             DD D F DLHD T+ D D+E++++ D  D  N+D+D FDVHA +D GEH NPS E DP
Sbjct: 134 LHDDGDDFDDLHDGTDLDEDDEDDDDDDEEDYENEDEDAFDVHAHDDAGEHDNPSIEFDP 193

Query: 175 GNFSSDEAYARALQDSEDREMAARLMALAGLHDEEADDTDDQGENSQDTWEDVDPDELSY 234
             FSSDEAYARALQ++E+REMAARL+ALAG++D EA + ++ G NSQD WEDVDPDELSY
Sbjct: 194 DVFSSDEAYARALQEAEEREMAARLLALAGINDREAGEAEEHGANSQDAWEDVDPDELSY 253

Query: 235 EELLALGEVVGTESRGLSADTIASLPSINFKAGSGQTGSNDSCVICRLDFEDDETLTVLS 294
           EELLALGEVVGTESRGLS DT+A LPSI +K GS Q GSNDSCVICR+D+EDDE+LTVLS
Sbjct: 254 EELLALGEVVGTESRGLSTDTLAGLPSIKYKTGSDQHGSNDSCVICRMDYEDDESLTVLS 313

Query: 295 CKHSYHSECINNWLKINKVCPVCSAEVCSTAGGSS 329
           CKH YH ECINNWLKINKVCPVCS EV  +A GSS
Sbjct: 314 CKHLYHPECINNWLKINKVCPVCSTEV--SASGSS 344

The following BLAST results are available for this feature:

BLAST of CmaCh04G002850 vs. Swiss-Prot


Match Name	E-value	Identity	Description
BBR_ARATH	1.1e-74	54.60	E3 ubiquitin ligase BIG BROTHER-related OS=Arabidopsis thaliana GN=BBR PE=2 SV=1	[more]
BB_ARATH	6.9e-24	43.06	E3 ubiquitin ligase BIG BROTHER OS=Arabidopsis thaliana GN=BB PE=1 SV=1	[more]
RNF44_HUMAN	1.1e-13	43.30	RING finger protein 44 OS=Homo sapiens GN=RNF44 PE=2 SV=1	[more]
RNF38_HUMAN	1.1e-13	41.24	E3 ubiquitin-protein ligase RNF38 OS=Homo sapiens GN=RNF38 PE=1 SV=4	[more]
RNF44_RAT	1.4e-13	43.30	RING finger protein 44 OS=Rattus norvegicus GN=Rnf44 PE=2 SV=1	[more]

BLAST of CmaCh04G002850 vs. TrEMBL


Match Name	E-value	Identity	Description
A0A0A0KL96_CUCSA	4.8e-133	79.29	Uncharacterized protein OS=Cucumis sativus GN=Csa_5G175690 PE=4 SV=1	[more]
A0A061E229_THECC	2.0e-99	67.33	RING/U-box superfamily protein OS=Theobroma cacao GN=TCM_007711 PE=4 SV=1	[more]
M5VR71_PRUPE	1.7e-98	66.78	Uncharacterized protein OS=Prunus persica GN=PRUPE_ppa008876mg PE=4 SV=1	[more]
A0A067L0A6_JATCU	3.9e-98	68.84	Uncharacterized protein OS=Jatropha curcas GN=JCGZ_05968 PE=4 SV=1	[more]
A0A0D2RJ35_GOSRA	3.1e-95	63.38	Uncharacterized protein OS=Gossypium raimondii GN=B456_005G211500 PE=4 SV=1	[more]

BLAST of CmaCh04G002850 vs. TAIR10


Match Name	E-value	Identity	Description
AT3G19910.1	6.3e-76	54.60	RING/U-box superfamily protein	[more]
AT3G63530.1	3.9e-25	43.06	RING/U-box superfamily protein	[more]
AT3G47180.1	2.6e-21	40.17	RING/U-box superfamily protein	[more]
AT3G15070.1	2.3e-17	38.00	RING/U-box superfamily protein	[more]
AT1G53190.1	1.3e-15	37.50	RING/U-box superfamily protein	[more]

BLAST of CmaCh04G002850 vs. NCBI nr


Match Name	E-value	Identity	Description
gi\|659090191\|ref\|XP_008445883.1\|	4.8e-134	79.53	PREDICTED: E3 ubiquitin ligase BIG BROTHER-related [Cucumis melo]	[more]
gi\|449451741\|ref\|XP_004143619.1\|	6.9e-133	79.29	PREDICTED: E3 ubiquitin ligase BIG BROTHER-related [Cucumis sativus]	[more]
gi\|1012245374\|ref\|XP_015942058.1\|	2.2e-99	71.48	PREDICTED: E3 ubiquitin ligase BIG BROTHER-related [Arachis duranensis]	[more]
gi\|590689562\|ref\|XP_007043263.1\|	2.9e-99	67.33	RING/U-box superfamily protein [Theobroma cacao]	[more]
gi\|1021569400\|ref\|XP_016175913.1\|	2.9e-99	71.64	PREDICTED: E3 ubiquitin ligase BIG BROTHER-related [Arachis ipaensis]	[more]

Annotated Terms

The following terms have been associated with this gene:

Vocabulary: **INTERPRO**
Term	Definition
IPR001841	Znf_RING
IPR013083	Znf_RING/FYVE/PHD

Vocabulary: **Molecular Function**
Term	Definition
GO:0005515	protein binding
GO:0008270	zinc ion binding

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0043161	proteasome-mediated ubiquitin-dependent protein catabolic process
biological_process	GO:0051865	protein autoubiquitination
biological_process	GO:0016567	protein ubiquitination
biological_process	GO:0008150	biological_process
cellular_component	GO:0005575	cellular_component
molecular_function	GO:0016874	ligase activity
molecular_function	GO:0005515	protein binding
molecular_function	GO:0004842	ubiquitin-protein transferase activity
molecular_function	GO:0008270	zinc ion binding
molecular_function	GO:0061630	ubiquitin protein ligase activity
molecular_function	GO:0003674	molecular_function

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
CmaCh04G002850.1	CmaCh04G002850.1	mRNA

InterPro

Analysis Name: InterPro Annotations of Cucurbita maxima
Date Performed: 2017-05-20


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR001841	Zinc finger, RING-type	PFAM	PF13639	zf-RING_2	coord: 274..316 score: 1.8
IPR001841	Zinc finger, RING-type	SMART	SM00184	ring_2	coord: 276..316 score: 5.
IPR001841	Zinc finger, RING-type	PROFILE	PS50089	ZF_RING_2	coord: 276..317 score: 11
IPR013083	Zinc finger, RING/FYVE/PHD-type	GENE3D	G3DSA:3.30.40.10		coord: 272..320 score: 2.3
None	No IPR available	PANTHER	PTHR14155	RING FINGER DOMAIN-CONTAINING	coord: 211..324 score: 9.0
None	No IPR available	PANTHER	PTHR14155:SF166	E3 UBIQUITIN LIGASE BIG BROTHER-RELATED	coord: 211..324 score: 9.0
None	No IPR available	unknown	SSF57850	RING/U-box	coord: 270..322 score: 9.42

Synteny

The following gene(s) are orthologous to this gene:


Gene	Orthologue	Organism	Block
CmaCh04G002850	Cla020053	Watermelon (97103) v1	cmawmB724
CmaCh04G002850	Csa5G175690	Cucumber (Chinese Long) v2	cmacuB747
CmaCh04G002850	MELO3C011752	Melon (DHL92) v3.5.1	cmameB654
CmaCh04G002850	ClCG02G014100	Watermelon (Charleston Gray)	cmawcgB642
CmaCh04G002850	CSPI05G08610	Wild cucumber (PI 183967)	cmacpiB757
CmaCh04G002850	CmoCh04G002930	Cucurbita moschata (Rifu)	cmacmoB728
CmaCh04G002850	CmoCh04G013290	Cucurbita moschata (Rifu)	cmacmoB730
CmaCh04G002850	Cp4.1LG01g04320	Cucurbita pepo (Zucchini)	cmacpeB720
CmaCh04G002850	Cp4.1LG01g10200	Cucurbita pepo (Zucchini)	cmacpeB722
CmaCh04G002850	MELO3C011752.2	Melon (DHL92) v3.6.1	cmamedB738
CmaCh04G002850	CsaV3_4G024180	Cucumber (Chinese Long) v3	cmacucB0850
CmaCh04G002850	CsaV3_5G006070	Cucumber (Chinese Long) v3	cmacucB0883
CmaCh04G002850	Cla97C02G039830	Watermelon (97103) v2	cmawmbB741
CmaCh04G002850	Bhi07G000924	Wax gourd	cmawgoB0910
CmaCh04G002850	CsGy5G006000	Cucumber (Gy14) v2	cgybcmaB674
CmaCh04G002850	Carg25686	Silver-seed gourd	carcmaB1179
CmaCh04G002850	Carg02052	Silver-seed gourd	carcmaB1171

The following gene(s) are paralogous to this gene:


Gene	Paralogue	Organism	Block
CmaCh04G002850	CmaCh04G012550	Cucurbita maxima (Rimu)	cmacmaB531

The following block(s) are covering this gene:


Gene	Organism	Block
CmaCh04G002850	Cucumber (Chinese Long) v3	cmacucB0892
CmaCh04G002850	Cucurbita maxima (Rimu)	cmacmaB532
CmaCh04G002850	Cucumber (Gy14) v1	cgycmaB0471
CmaCh04G002850	Wild cucumber (PI 183967)	cmacpiB763
CmaCh04G002850	Cucumber (Chinese Long) v2	cmacuB754
CmaCh04G002850	Watermelon (97103) v1	cmawmB650
CmaCh04G002850	Bottle gourd (USVL1VR-Ls)	cmalsiB677