CsGy5G005710 (gene) Cucumber (Gy14) v2
The following sequences are available for this feature:
Legend: five_prime_UTRexonCDSthree_prime_UTR Hold the cursor over a type above to highlight its positions in the sequence below.GTATTTCTTATTTTCTTCTTTTCCTACGAGCATTGAGAGTTGAGTGGTTTTTTGTTCGTCTTGGCGTTCAAAACCCTAGTGTCAGCACCACATAAATTTCTCTCTAAAATCATTCCCAAGAATCCCAAAAACTCCTCTTTAATCTTTGACTGAAGTCTAATAAGCTGAATTAGGGGTTTTCTCCAATTTGTGGATTTTCTCGTCTTCTGTGTTCATCTGAAAAAATATTTCATCACCATGGATGCCCAAAGAGCTCTTCTGGATGAACTCATGGGTTCAGGTTCTCCTCTGATTAAACTTTTTTTCTTCTTTGGATTTTTTTTTTCCAATTTGATGTATTGTTATGATTATTGATTTTACGGATTATCTAGTTGGAGAGGAATAAAGTTGTCTTTATTAGTTTTGAGGAATTTGGAAGGAAATGTGGGGGTACTATCCATCAGCCGTTCAATTTTTCACACAATGCTTCCCTTTTGTAATATGGGATTTCTAATTTGTAATCTTCTTTTTCGTTTTCTTCACATCTATTGTTGTCATTTGATTAGTTTTGGTGCGTTCTTGTATTATCGTGTGGCCTTTGAAATTTCCTTGGTGAGAATTGTCTTTGGTTCAAATGAAGTGACTTAATTTTGTATCTGTTTTGGTTTTGTAGCGCGTAATTTAACGGAGGAAGAACGAAGAGGATACAAGGAAGTTATGTGGGATGATAAGGAGGTCTGCGGGTTCTATATGGTTCGGTTTTGCCCACACGATCTTTTCGTAAATACTCGGAGCGACCTAGGTGGGTATTTTTCTTTTTTTATGTTAAAAGCATTACTCTGGTCTCTGAAATATCTAAGTGAACAAAGTCAAATAAAGCGAAATCAGTAGCAGATTTTGAGGATAATGGTAAAATGCTTATTCTGTGTATGTTCTTATGTGCTGTTTTATTGCTTCTCAATGTTTATTCTTATCTGATAAGATTGTAATTTGCGTTTAATAGGTTTACTTATAAATAGTAAATGTAAATAAATGTTATTTTATGTTTATCCTTTCCTTGCAGACTTTTTTTTTTTTTTCAATAAGAAACATTTTCCTTGCAGAGCTTTGGTTTATAATATTTAGGAAGAGTAATTTGTTTCTAAGATTGAATTCTTATTTCTGCTTTTTGGATCAGGTCCTTGTACTAGGATACATGACCAGAAATTGAAAGAAAGGTGACAACCAAACCAAGTTCCAAATTTGATTTCTTGTATAACCCTGCTAGCATCGTGAATTTCATATTCTTTATGTACTTGATTTAGTAATTGCTCTTGCTCGTGTTACAAACTAAGCTTCTGTTTTAAATATTTATATTTGGACTATTCTCTTTAAAGGTCTGCCGATTGCACTAGCTATGTTCTGGGAAAATATTAAATAACAATATTTGGTGGGTTATCTTTTTTCATGAGTGGTGATTGTCTATTGTTTTATACATCAACGTTCCAGTTTACTGTTTGTAATGTAGTTTTATAAGTATCACCATATGGTCTTCTCTTAATAAAAAAGAGTATTTTATTGCGAGACATGTGGTTTATTTTCGATTGGAGCAATGTGGATTATGTATTTTCAATCTTCATGAAATATCTTGCTGATTTCTTTGCATAACTCATAAGTATCACAACATTTTTATGGATAAAAGGGCTTCACTTTACTAATTTCTCTTAAATATGAGGAATGTTCTTGAAAGGAAGTAATCTTCTTGGACATCTTGAAGCATTGCTTAGCTTACTGGTTTGCTTATTTTGAGCATATCTTTTGGTCTTTCAGGACTCAAAAAATTTCTTCAGGTTTTTATTTTTCGACATGTGGAATAAGTTAATGCATGTCTCACTTTGAAATATGAATAAAAGGATTGACTGTTAACTGTAGCTATAATAGAAATGCACAATCTTTCATCTTTTACTAATGTTTTCCTAATTTTATTTTTAAATATTTCAGCTTTGAGAAGTCACCCAGGCATGATGCTTATGTTCCCAAATTCGAGGCTGAACTTGCTCAGTTCTGCGAGAAATTGGTTAGTGCTATATGTTTAAGATTGATGCTGTAGGTGTGATGTCTGTACTCATCTTTCTTTTTTTTGTCTAATGGGAACTAAAATTACTTAAACAGGTAATGGACTTGGATCGACGTGTTAGGCGTGGAAGAGAGCGTCTTGCTCAAGAGGTTGAACCTGCACCACCAACTCCATTGTCAGCCGAGAAGTCAGAGCAATTATCTGTACTGGAGGAAAAAATAAAGAATTTATTGGAACAGGTGGAGGCTCTTGGTGAGGCGGGTAAAGTGGATGAAGCTGAAGCGCTGATGAGAAAGGTACTTACACAAGTCGGGTTCCCTTAAGCACACCTAGACATTATCTGCTTAAATGAGGAGCAATTCCAGAATCGCTCTAATTAAACACTGGCATAACTCACAATTTCACAATGTCGGTATTCTTTAGTGTATGTTGATCACATTCCACGAATTGAAAATAGCACATGTCAAGAACTACTCTATCCCAAAAAAAAGAAGAAGAAAAGATTCATGAACCACTAAATTAGTCAGTAGGAGATAGAAGCAGTTATTTATATTGGTCTTTTTTTGTCGTCCTTTCAGGTTGATTTACTTAATACTGAGAAAACAGCCTTGACTCAACAAACCCAAAATGATAAGGTATTGATGCTCGCTCAAGAGAAAAAAATGGCCCTTTGTGAGATATGTGGTTCTTTTCTTGTAGCAAATGATGCTGCAGAGAGAGTCCAGTCTCATGTCACGGGTAAGCAGCATGTTGGTTATGGTATGGTCAGAGATTTCATCTCCGAGCACAAGGTAAGGTGTTCCTAAAACTAAATGAAAGTTGTTCAATCATTTTTCTTTTGATGAAATATGTTCAAGTGGGTGTCACCTGACAGGAAGCAAAAGAGAAAGCAAGGGAAGAAGAAAGACTAGCTAGGGAGAAAGAGGCAGAAGAACGGAAGAAGCAGAGAGAGGAGTTTGAGAGAAGAAAGAGAGGTGACTCTAGCGAGGACAAATATCGTGACAGAGAGCGAGACAGGGATCGGAATAGGTATCGGGAACGAGACCGCGATCGTGAAAGGTCTAGAAGAGGTGGCCGTGATGAAATAAGAGGAATGGATTGGAGGTCTAGGAATGGAAGAGATGGAGGCAGGGATAGGTATCGTGATCGGAGCAGGTCAAAATCCCCCATAAGACGTGGTCACAGGAGATCATCTAGGAGTCCATTGCGGCCATAATTATGAACTATGTTAAGAGGTCTGAGCTTTGGGACTAAATGAGGTAGATCTCTACATGTTCGAAGCTTATGAATGTATGCTTTGGTACCTCAAGTTACTTTGTTAGTATTGGTGAAACTTTTTTTGCTATCTCACAGCTGTGTTGACTGTATCATCTCCCTTTCATCATTATTATTAGAGGAGAACAGGGTTGAGGTAGGTATTTTTTTTTTTTTTTTGCGACTCTTCTTCAAGTATAGTTTGACTTTTGATTTGCA GTATTTCTTATTTTCTTCTTTTCCTACGAGCATTGAGAGTTGAGTGGTTTTTTGTTCGTCTTGGCGTTCAAAACCCTAGTGTCAGCACCACATAAATTTCTCTCTAAAATCATTCCCAAGAATCCCAAAAACTCCTCTTTAATCTTTGACTGAAGTCTAATAAGCTGAATTAGGGGTTTTCTCCAATTTGTGGATTTTCTCGTCTTCTGTGTTCATCTGAAAAAATATTTCATCACCATGGATGCCCAAAGAGCTCTTCTGGATGAACTCATGGGTTCAGCGCGTAATTTAACGGAGGAAGAACGAAGAGGATACAAGGAAGTTATGTGGGATGATAAGGAGGTCTGCGGGTTCTATATGGTTCGGTTTTGCCCACACGATCTTTTCGTAAATACTCGGAGCGACCTAGGTCCTTGTACTAGGATACATGACCAGAAATTGAAAGAAAGCTTTGAGAAGTCACCCAGGCATGATGCTTATGTTCCCAAATTCGAGGCTGAACTTGCTCAGTTCTGCGAGAAATTGGTAATGGACTTGGATCGACGTGTTAGGCGTGGAAGAGAGCGTCTTGCTCAAGAGGTTGAACCTGCACCACCAACTCCATTGTCAGCCGAGAAGTCAGAGCAATTATCTGTACTGGAGGAAAAAATAAAGAATTTATTGGAACAGGTGGAGGCTCTTGGTGAGGCGGGTAAAGTGGATGAAGCTGAAGCGCTGATGAGAAAGGTTGATTTACTTAATACTGAGAAAACAGCCTTGACTCAACAAACCCAAAATGATAAGGTATTGATGCTCGCTCAAGAGAAAAAAATGGCCCTTTGTGAGATATGTGGTTCTTTTCTTGTAGCAAATGATGCTGCAGAGAGAGTCCAGTCTCATGTCACGGGTAAGCAGCATGTTGGTTATGGTATGGTCAGAGATTTCATCTCCGAGCACAAGGAAGCAAAAGAGAAAGCAAGGGAAGAAGAAAGACTAGCTAGGGAGAAAGAGGCAGAAGAACGGAAGAAGCAGAGAGAGGAGTTTGAGAGAAGAAAGAGAGGTGACTCTAGCGAGGACAAATATCGTGACAGAGAGCGAGACAGGGATCGGAATAGGTATCGGGAACGAGACCGCGATCGTGAAAGGTCTAGAAGAGGTGGCCGTGATGAAATAAGAGGAATGGATTGGAGGTCTAGGAATGGAAGAGATGGAGGCAGGGATAGGTATCGTGATCGGAGCAGGTCAAAATCCCCCATAAGACGTGGTCACAGGAGATCATCTAGGAGTCCATTGCGGCCATAATTATGAACTATGTTAAGAGGTCTGAGCTTTGGGACTAAATGAGCTGTGTTGACTGTATCATCTCCCTTTCATCATTATTATTAGAGGAGAACAGGGTTGAGGTAGGTATTTTTTTTTTTTTTTTGCGACTCTTCTTCAAGTATAGTTTGACTTTTGATTTGCA ATGGATGCCCAAAGAGCTCTTCTGGATGAACTCATGGGTTCAGCGCGTAATTTAACGGAGGAAGAACGAAGAGGATACAAGGAAGTTATGTGGGATGATAAGGAGGTCTGCGGGTTCTATATGGTTCGGTTTTGCCCACACGATCTTTTCGTAAATACTCGGAGCGACCTAGGTCCTTGTACTAGGATACATGACCAGAAATTGAAAGAAAGCTTTGAGAAGTCACCCAGGCATGATGCTTATGTTCCCAAATTCGAGGCTGAACTTGCTCAGTTCTGCGAGAAATTGGTAATGGACTTGGATCGACGTGTTAGGCGTGGAAGAGAGCGTCTTGCTCAAGAGGTTGAACCTGCACCACCAACTCCATTGTCAGCCGAGAAGTCAGAGCAATTATCTGTACTGGAGGAAAAAATAAAGAATTTATTGGAACAGGTGGAGGCTCTTGGTGAGGCGGGTAAAGTGGATGAAGCTGAAGCGCTGATGAGAAAGGTTGATTTACTTAATACTGAGAAAACAGCCTTGACTCAACAAACCCAAAATGATAAGGTATTGATGCTCGCTCAAGAGAAAAAAATGGCCCTTTGTGAGATATGTGGTTCTTTTCTTGTAGCAAATGATGCTGCAGAGAGAGTCCAGTCTCATGTCACGGGTAAGCAGCATGTTGGTTATGGTATGGTCAGAGATTTCATCTCCGAGCACAAGGAAGCAAAAGAGAAAGCAAGGGAAGAAGAAAGACTAGCTAGGGAGAAAGAGGCAGAAGAACGGAAGAAGCAGAGAGAGGAGTTTGAGAGAAGAAAGAGAGGTGACTCTAGCGAGGACAAATATCGTGACAGAGAGCGAGACAGGGATCGGAATAGGTATCGGGAACGAGACCGCGATCGTGAAAGGTCTAGAAGAGGTGGCCGTGATGAAATAAGAGGAATGGATTGGAGGTCTAGGAATGGAAGAGATGGAGGCAGGGATAGGTATCGTGATCGGAGCAGGTCAAAATCCCCCATAAGACGTGGTCACAGGAGATCATCTAGGAGTCCATTGCGGCCATAA MDAQRALLDELMGSARNLTEEERRGYKEVMWDDKEVCGFYMVRFCPHDLFVNTRSDLGPCTRIHDQKLKESFEKSPRHDAYVPKFEAELAQFCEKLVMDLDRRVRRGRERLAQEVEPAPPTPLSAEKSEQLSVLEEKIKNLLEQVEALGEAGKVDEAEALMRKVDLLNTEKTALTQQTQNDKVLMLAQEKKMALCEICGSFLVANDAAERVQSHVTGKQHVGYGMVRDFISEHKEAKEKAREEERLAREKEAEERKKQREEFERRKRGDSSEDKYRDRERDRDRNRYRERDRDRERSRRGGRDEIRGMDWRSRNGRDGGRDRYRDRSRSKSPIRRGHRRSSRSPLRP
BLAST of CsGy5G005710 vs. NCBI nr
Match: XP_004143633.1 (PREDICTED: luc7-like protein 3 [Cucumis sativus] >XP_011654891.1 PREDICTED: luc7-like protein 3 [Cucumis sativus] >KGN50411.1 hypothetical protein Csa_5G172900 [Cucumis sativus]) HSP 1 Score: 477.6 bits (1228), Expect = 3.5e-131 Identity = 314/314 (100.00%), Postives = 314/314 (100.00%), Query Frame = 0
BLAST of CsGy5G005710 vs. NCBI nr
Match: XP_008467232.1 (PREDICTED: luc7-like protein 3 [Cucumis melo] >XP_008467233.1 PREDICTED: luc7-like protein 3 [Cucumis melo]) HSP 1 Score: 471.9 bits (1213), Expect = 1.9e-129 Identity = 309/314 (98.41%), Postives = 310/314 (98.73%), Query Frame = 0
BLAST of CsGy5G005710 vs. NCBI nr
Match: XP_022958228.1 (luc7-like protein 3 [Cucurbita moschata] >XP_022958229.1 luc7-like protein 3 [Cucurbita moschata] >XP_022995734.1 luc7-like protein 3 [Cucurbita maxima] >XP_022995735.1 luc7-like protein 3 [Cucurbita maxima] >XP_023533430.1 luc7-like protein 3 [Cucurbita pepo subsp. pepo] >XP_023533431.1 luc7-like protein 3 [Cucurbita pepo subsp. pepo]) HSP 1 Score: 468.0 bits (1203), Expect = 2.8e-128 Identity = 237/241 (98.34%), Postives = 239/241 (99.17%), Query Frame = 0
BLAST of CsGy5G005710 vs. NCBI nr
Match: XP_022157696.1 (luc7-like protein 3 [Momordica charantia]) HSP 1 Score: 466.5 bits (1199), Expect = 8.1e-128 Identity = 237/241 (98.34%), Postives = 237/241 (98.34%), Query Frame = 0
BLAST of CsGy5G005710 vs. NCBI nr
Match: XP_023550802.1 (luc7-like protein 3 [Cucurbita pepo subsp. pepo]) HSP 1 Score: 460.3 bits (1183), Expect = 5.8e-126 Identity = 232/239 (97.07%), Postives = 238/239 (99.58%), Query Frame = 0
BLAST of CsGy5G005710 vs. TAIR10
Match: AT5G51410.1 (LUC7 N_terminus domain-containing protein) HSP 1 Score: 398.7 bits (1023), Expect = 3.8e-111 Identity = 200/241 (82.99%), Postives = 218/241 (90.46%), Query Frame = 0
BLAST of CsGy5G005710 vs. TAIR10
Match: AT5G17440.1 (LUC7 related protein) HSP 1 Score: 104.8 bits (260), Expect = 1.1e-22 Identity = 84/322 (26.09%), Postives = 139/322 (43.17%), Query Frame = 0
BLAST of CsGy5G005710 vs. TAIR10
Match: AT3G03340.1 (LUC7 related protein) HSP 1 Score: 103.6 bits (257), Expect = 2.5e-22 Identity = 82/320 (25.62%), Postives = 133/320 (41.56%), Query Frame = 0
BLAST of CsGy5G005710 vs. Swiss-Prot
Match: sp|Q3SX41|LC7L3_BOVIN (Luc7-like protein 3 OS=Bos taurus OX=9913 GN=LUC7L3 PE=2 SV=1) HSP 1 Score: 185.7 bits (470), Expect = 9.0e-46 Identity = 98/231 (42.42%), Postives = 145/231 (62.77%), Query Frame = 0
BLAST of CsGy5G005710 vs. Swiss-Prot
Match: sp|O95232|LC7L3_HUMAN (Luc7-like protein 3 OS=Homo sapiens OX=9606 GN=LUC7L3 PE=1 SV=2) HSP 1 Score: 185.7 bits (470), Expect = 9.0e-46 Identity = 98/231 (42.42%), Postives = 145/231 (62.77%), Query Frame = 0
BLAST of CsGy5G005710 vs. Swiss-Prot
Match: sp|Q5SUF2|LC7L3_MOUSE (Luc7-like protein 3 OS=Mus musculus OX=10090 GN=Luc7l3 PE=1 SV=1) HSP 1 Score: 185.7 bits (470), Expect = 9.0e-46 Identity = 98/231 (42.42%), Postives = 145/231 (62.77%), Query Frame = 0
BLAST of CsGy5G005710 vs. Swiss-Prot
Match: sp|Q5R8W6|LC7L3_PONAB (Luc7-like protein 3 OS=Pongo abelii OX=9601 GN=LUC7L3 PE=2 SV=1) HSP 1 Score: 185.7 bits (470), Expect = 9.0e-46 Identity = 98/231 (42.42%), Postives = 145/231 (62.77%), Query Frame = 0
BLAST of CsGy5G005710 vs. Swiss-Prot
Match: sp|Q9NQ29|LUC7L_HUMAN (Putative RNA-binding protein Luc7-like 1 OS=Homo sapiens OX=9606 GN=LUC7L PE=1 SV=1) HSP 1 Score: 131.3 bits (329), Expect = 2.0e-29 Identity = 81/240 (33.75%), Postives = 132/240 (55.00%), Query Frame = 0
BLAST of CsGy5G005710 vs. TrEMBL
Match: tr|A0A0A0KRS2|A0A0A0KRS2_CUCSA (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_5G172900 PE=4 SV=1) HSP 1 Score: 477.6 bits (1228), Expect = 2.3e-131 Identity = 314/314 (100.00%), Postives = 314/314 (100.00%), Query Frame = 0
BLAST of CsGy5G005710 vs. TrEMBL
Match: tr|A0A1S3CT91|A0A1S3CT91_CUCME (luc7-like protein 3 OS=Cucumis melo OX=3656 GN=LOC103504633 PE=4 SV=1) HSP 1 Score: 471.9 bits (1213), Expect = 1.3e-129 Identity = 309/314 (98.41%), Postives = 310/314 (98.73%), Query Frame = 0
BLAST of CsGy5G005710 vs. TrEMBL
Match: tr|A0A061G0Z3|A0A061G0Z3_THECC (LUC7 N_terminus domain-containing protein isoform 1 OS=Theobroma cacao OX=3641 GN=TCM_014922 PE=4 SV=1) HSP 1 Score: 443.4 bits (1139), Expect = 4.9e-121 Identity = 220/241 (91.29%), Postives = 232/241 (96.27%), Query Frame = 0
BLAST of CsGy5G005710 vs. TrEMBL
Match: tr|A0A2P5QGS0|A0A2P5QGS0_GOSBA (Uncharacterized protein OS=Gossypium barbadense OX=3634 GN=GOBAR_DD29321 PE=4 SV=1) HSP 1 Score: 441.8 bits (1135), Expect = 1.4e-120 Identity = 219/241 (90.87%), Postives = 230/241 (95.44%), Query Frame = 0
BLAST of CsGy5G005710 vs. TrEMBL
Match: tr|A0A0D2S6Y5|A0A0D2S6Y5_GOSRA (Uncharacterized protein OS=Gossypium raimondii OX=29730 GN=B456_007G046600 PE=4 SV=1) HSP 1 Score: 439.9 bits (1130), Expect = 5.4e-120 Identity = 218/241 (90.46%), Postives = 229/241 (95.02%), Query Frame = 0
The following BLAST results are available for this feature:
The following terms have been associated with this gene:
GO Assignments
This gene is annotated with the following GO terms.
The following mRNA feature(s) are a part of this gene:
Analysis Name: InterPro Annotations of cucumber Gy14 genome (v2)
Date Performed: 2018-09-25
The following gene(s) are orthologous to this gene: The following gene(s) are paralogous to this gene: None The following block(s) are covering this gene:
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