Carg20778 (gene) Silver-seed gourd | Cucurbit Genomics Database (CuGenDB)

Overview


Name	Carg20778
Type	gene
Organism	Cucurbita argyrosperma (Silver-seed gourd)
Description	luc7-like protein 3
Location	Cucurbita_argyrosperma_scaffold_134 : 280955 .. 283792 (+)

Genome Viewer

Gene Expression

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonfive_prime_UTRpolypeptideCDS

Hold the cursor over a type above to highlight its positions in the sequence below.

AAAAACATTCCCAAGAATCTCAAAACCCCTTTTTAATCTCTTGAAGACTGAATTTCAAGTTACTGAATTTGGATCGTTCTTTCAAGTAATTGTTTCTTTGTTTTCTGTGATCCTCTGGAAAGCATTTGGTCAGCATGGACGCCCAGAGAGCTCTTCTGGATGAAATCATGGGTTCAGGTACTCTTCTGATTCGACTGATAGTTTTTCTTTGGAAATTTTGGTTTCAATTTGATAACATTTACGTGTTATTGATTTTTTGATCTTGTGGAGTATCTAGTTGGAGGGGAATGGAAGTGTTTCTATTAGTTTAGAGGAATTTGGAAAGGGAATGTGGGAGTATTATCCACCAGGCGTGCAATTTTTCACTTGATATTCCCCTTTTTGTGATTTCCAACATGAGTTTTCTTATTTTTAATTTTCTTTTTTCACGATTTTTGTTGCCATTTGATCTTTGTTGGTGCTTGTTTGGTTTTTTTAGCGCGTAATTTGACGGAGGAAGAAAGAAGAGGATACAAGGAAGTTATGTGGGATGATAAAGAGGTCTGTGGGTTCTATATGGTCCGGTTCTGCCCGCATCATCTTTTCGTAAATACTCGGAGCGACCTTGGTGCGTTGTTTACTTTTTTATATTAACCGTAACTCTGGTCTCTGGTCTCTGGTCTCTGTCAAATTTCTAAGTGGCAAAGTCCAATAAGGAGAAGAAGTCAGTAGCAGTTGTTCTGTGTATGTTTTTAGCCTCAATGCTTATTCTTATTGGATACCGTTCTTATTTGTGTTTATAGGTCCACTTACAGTATATATATATGCTCGTTTATCCTTTTTTTCTTTTTTTGCGGACTATTGGTCTATAATGTATAGGAAGGGTAATTTGTTTCTAAGATTGGATTCTTGTTTCGTCTTTTGTATCAGGTCCTTGTCCTAGAATACATGACCAGAAATTGAAAGAAAGGTGAAACCCAAGTACCAAATTTGAGTACTTTTATCACCGCTTTTGGTCATGAATTTTATATTCTATATGCATTTCCCGCACATGGTTACAAAACAAAGCTTCTGTTTTCACTATTTATATTTAGATAACTCTCTTTAGAGGAAGTCTGGCAACTGCACTAGCTATGTTCTGGGAAATATAAGATATGCTATTTGACAGGATTTGACAGGTAAAAGGCCTTTGAATATCCTCTGAAGAATGCAATTACGAGGACATTTAGGGAAAAACCATATCAACAGCTTCAGCTTGTGCTAATTCTCTCTCTGTGAAGCGTGAAGCTTGAACCTGGGGCTTCTCCCCCTCTCTGCAAAGTTTGTGAATCAATTGTAATAGCTCGTTCTCTTAACCGTTGCTTTATTTGGAACTATGAATCTGAGAAATATCTCTGATTTAAGTATCACATTCACTGTTATGGATAAAAGCACTCCACTTTACTAAGCTCTTTTAAACTGGAAAAGTAATGTTCTTGAAAGAAAGTAGTTCTTCTTGGACGCCTTGAGCAGCATTAATTACAACTGGTGGACATCTTGAAACATTGCTTGGTCTTAACAATGTGCTTATTTTGAGCATACTTTTTGGTCTTTCAAGACTAAAAATTTCTTCAGGTTCTTGTTACGCAATATATGTAAATGAATACATATAAACTGTAGCTATAAAAGAAATTCACAGATTTTTTTCTTCTAGTAATGTTTTCTTCCCCTTTTTTTTTTTTTTTTTTTTAAAAAAAAAATCAGCTTTGAAAAGTCACCAAGGCATGATGCTTTCGTTCCCAAATTTGAGGCTGAACTTGCTCAGTTTTGCGAGAAACTAGTTAGTGCTATATGTGTTTTAAGATGATGCTGTACATTATATGTGCAATCTGTTTCTTTTTTTCATGGAAACTATAATCATTTAAACAGGTAATGGACTTGGATAGACGTGTTAGGCGTGGACGAGAGCGTCTTTCCCAAGAGGTCGAACCTGCACCACCATCTCCATTGTCAGCTGAAAAGGCAGAGCAGTTATCTGTGCTGGAGGAAAAAATAAAGAACTTACTGGAACAGGTGGAGGCCCTTGGTGAAGCTGGTAAAGTGGACGAAGCTGAAGCGCCGATGAGAAAGGTGCTTATATGCATGCCTGGTTTGCTTAAGCATTCCAGACACCATGGCTATTCTTATTGCACTTTTGTTGTCTTGGTTTCAGGTGGATTTACTTAATTCTGAAAAAACTGGGTTAACTCAACAAACCCAAAACGATAAGGTATTGATGCTTGCTCAAGAGAAAAAAATGGCCCTCTGTGAGATATGCGGTTCTGTTCTTGTAGCAAATGATGGTGCAGAGAGAGTTCAGTCTCATGTCACTGGTAAGCAACACGTTGGTTATGCTATGGTCAGAAATTTCATCTCTGATCACAAGGTAAGCACTCCTAAAACTAAATGAAAGTTCAACCATTTTTGTTGTGGTGAAATATGTTTTAAGTGGGCATCACCTGGCAGGAAGCAAAGGAGAAAGAAATGGCAGAAGAAAGATTAGCTTGGGAGAAAGAGGCAGAAGAACGGAGGAAGCAGAGAGAAGAGTATGAGAGAAGAAAGAGAAGTAACTCTAGTGAGAAGGACCGATATCGTGACAGAGAGCAAGACAGGGATCGAGATAGGTATCGTGAACGAAACCGACATCGTCAAAGGTCTAGAAGAGGTGGCCGTGATGAAGTAAGAGGAATGGAAGAGATGGAGGCAGGGATAGGTTTCGTGGCCGGAGCAGGTCAAGATCCCCTGCAAGGCATGGTCACAGGAGATCATCCAGAAGTCCAGTGCGATCATGACTATGAAATGTGTTGGGAGATGTCTGAGCTTTGGGATTCAATGAGTTAG

mRNA sequence

AAAAACATTCCCAAGAATCTCAAAACCCCTTTTTAATCTCTTGAAGACTGAATTTCAAGTTACTGAATTTGGATCGTTCTTTCAAGTAATTGTTTCTTTGTTTTCTGTGATCCTCTGGAAAGCATTTGGTCAGCATGGACGCCCAGAGAGCTCTTCTGGATGAAATCATGGGTTCAGCGCGTAATTTGACGGAGGAAGAAAGAAGAGGATACAAGGAAGTTATGTGGGATGATAAAGAGGTCTGTGGGTTCTATATGGTCCGGTTCTGCCCGCATCATCTTTTCGTAAATACTCGGAGCGACCTTGGTCCTTGTCCTAGAATACATGACCAGAAATTGAAAGAAAGCTTTGAAAAGTCACCAAGGCATGATGCTTTCGTTCCCAAATTTGAGGCTGAACTTGCTCAGTTTTGCGAGAAACTAGTAATGGACTTGGATAGACGTGTTAGGCGTGGACGAGAGCGTCTTTCCCAAGAGGTCGAACCTGCACCACCATCTCCATTGTCAGCTGAAAAGGCAGAGCAGTTATCTGTGCTGGAGGAAAAAATAAAGAACTTACTGGAACAGGTGGAGGCCCTTGGTGAAGCTGGTAAAGTGGACGAAGCTGAAGCGCCGATGAGAAAGGTGGATTTACTTAATTCTGAAAAAACTGGGTTAACTCAACAAACCCAAAACGATAAGGTATTGATGCTTGCTCAAGAGAAAAAAATGGCCCTCTGTGAGATATGCGGTTCTGTTCTTGTAGCAAATGATGGTGCAGAGAGAGTTCAGTCTCATGTCACTGGTAAGCAACACGTTGGTTATGCTATGGTCAGAAATTTCATCTCTGATCACAAGGAAGCAAAGGAGAAAGAAATGGCAGAAGAAAGATTAGCTTGGGAGAAAGAGGCAGAAGAACGGAGGAAGCAGAGAGAAGAGTATGAGAGAAGAAAGAGAAGTAACTCTAGTGAGAAGGACCGATATCGTGACAGAGAGCAAGACAGGGATCGAGATAGGTATCGTGAACGAAACCGACATCGTCAAAGGTCTAGAAGAGGTGGCCGTGATGAAGTAAGAGGAATGGAAGAGATGGAGGCAGGGATAGGTTTCGTGGCCGGAGCAGGTCAAGATCCCCTGCAAGGCATGGTCACAGGAGATCATCCAGAAGTCCAGTGCGATCATGACTATGAAATGTGTTGGGAGATGTCTGAGCTTTGGGATTCAATGAGTTAG

Coding sequence (CDS)

ATGGACGCCCAGAGAGCTCTTCTGGATGAAATCATGGGTTCAGCGCGTAATTTGACGGAGGAAGAAAGAAGAGGATACAAGGAAGTTATGTGGGATGATAAAGAGGTCTGTGGGTTCTATATGGTCCGGTTCTGCCCGCATCATCTTTTCGTAAATACTCGGAGCGACCTTGGTCCTTGTCCTAGAATACATGACCAGAAATTGAAAGAAAGCTTTGAAAAGTCACCAAGGCATGATGCTTTCGTTCCCAAATTTGAGGCTGAACTTGCTCAGTTTTGCGAGAAACTAGTAATGGACTTGGATAGACGTGTTAGGCGTGGACGAGAGCGTCTTTCCCAAGAGGTCGAACCTGCACCACCATCTCCATTGTCAGCTGAAAAGGCAGAGCAGTTATCTGTGCTGGAGGAAAAAATAAAGAACTTACTGGAACAGGTGGAGGCCCTTGGTGAAGCTGGTAAAGTGGACGAAGCTGAAGCGCCGATGAGAAAGGTGGATTTACTTAATTCTGAAAAAACTGGGTTAACTCAACAAACCCAAAACGATAAGGTATTGATGCTTGCTCAAGAGAAAAAAATGGCCCTCTGTGAGATATGCGGTTCTGTTCTTGTAGCAAATGATGGTGCAGAGAGAGTTCAGTCTCATGTCACTGGTAAGCAACACGTTGGTTATGCTATGGTCAGAAATTTCATCTCTGATCACAAGGAAGCAAAGGAGAAAGAAATGGCAGAAGAAAGATTAGCTTGGGAGAAAGAGGCAGAAGAACGGAGGAAGCAGAGAGAAGAGTATGAGAGAAGAAAGAGAAGTAACTCTAGTGAGAAGGACCGATATCGTGACAGAGAGCAAGACAGGGATCGAGATAGGTATCGTGAACGAAACCGACATCGTCAAAGGTCTAGAAGAGGTGGCCGTGATGAAGTAAGAGGAATGGAAGAGATGGAGGCAGGGATAGGTTTCGTGGCCGGAGCAGGTCAAGATCCCCTGCAAGGCATGGTCACAGGAGATCATCCAGAAGTCCAGTGCGATCATGACTATGAAATGTGTTGGGAGATGTCTGAGCTTTGGGATTCAATGAGTTAG

Protein sequence

MDAQRALLDEIMGSARNLTEEERRGYKEVMWDDKEVCGFYMVRFCPHHLFVNTRSDLGPCPRIHDQKLKESFEKSPRHDAFVPKFEAELAQFCEKLVMDLDRRVRRGRERLSQEVEPAPPSPLSAEKAEQLSVLEEKIKNLLEQVEALGEAGKVDEAEAPMRKVDLLNSEKTGLTQQTQNDKVLMLAQEKKMALCEICGSVLVANDGAERVQSHVTGKQHVGYAMVRNFISDHKEAKEKEMAEERLAWEKEAEERRKQREEYERRKRSNSSEKDRYRDREQDRDRDRYRERNRHRQRSRRGGRDEVRGMEEMEAGIGFVAGAGQDPLQGMVTGDHPEVQCDHDYEMCWEMSELWDSMS

Homology

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BLAST of Carg20778 vs. NCBI nr
Match: XP_023550802.1 (luc7-like protein 3 [Cucurbita pepo subsp. pepo])

HSP 1 Score: 474.2 bits (1219), Expect = 4.0e-130
Identity = 240/248 (96.77%), Postives = 242/248 (97.58%), Query Frame = 0


Query: 1   MDAQRALLDEIMGSARNLTEEERRGYKEVMWDDKEVCGFYMVRFCPHHLFVNTRSDLGPC 60
           MDAQRALLDE+MGSARNLTEEERRGYKEVMWDDKEVCGFYMVRFCPH LFVNTRSDLGPC
Sbjct: 1   MDAQRALLDELMGSARNLTEEERRGYKEVMWDDKEVCGFYMVRFCPHDLFVNTRSDLGPC 60

Query: 61  PRIHDQKLKESFEKSPRHDAFVPKFEAELAQFCEKLVMDLDRRVRRGRERLSQEVEPAPP 120
           PRIHDQKLKESFEKSPRHDAFVPKFEAELAQFCEKLVMDLDRRVRRGRERLSQEVEPAPP
Sbjct: 61  PRIHDQKLKESFEKSPRHDAFVPKFEAELAQFCEKLVMDLDRRVRRGRERLSQEVEPAPP 120

Query: 121 SPLSAEKAEQLSVLEEKIKNLLEQVEALGEAGKVDEAEAPMRKVDLLNSEKTGLTQQTQN 180
           SPLSAEKAEQLSVLEEKIKNLLEQVEALGEAGKVDEAEA MRKVDLLNSEKT LTQQTQN
Sbjct: 121 SPLSAEKAEQLSVLEEKIKNLLEQVEALGEAGKVDEAEALMRKVDLLNSEKTALTQQTQN 180

Query: 181 DKVLMLAQEKKMALCEICGSVLVANDGAERVQSHVTGKQHVGYAMVRNFISDHKEAKEKE 240
           DKVLMLAQEKKMALCEICGS LVAND AERVQSHVTGKQHVGY MVRNFIS+HKEAKEKE
Sbjct: 181 DKVLMLAQEKKMALCEICGSFLVANDAAERVQSHVTGKQHVGYGMVRNFISEHKEAKEKE 240

Query: 241 MAEERLAW 249
           MAEERLAW
Sbjct: 241 MAEERLAW 248

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BLAST of Carg20778 vs. NCBI nr
Match: XP_022929113.1 (luc7-like protein 3 isoform X2 [Cucurbita moschata] >XP_022929114.1 luc7-like protein 3 isoform X3 [Cucurbita moschata])

HSP 1 Score: 471.5 bits (1212), Expect = 2.6e-129
Identity = 239/248 (96.37%), Postives = 241/248 (97.18%), Query Frame = 0


Query: 1   MDAQRALLDEIMGSARNLTEEERRGYKEVMWDDKEVCGFYMVRFCPHHLFVNTRSDLGPC 60
           MDAQRALLDE+MGSARNLTEEERRGYKEVMWDDKEVCGFYMVRFCPH LFVNTRSDLGPC
Sbjct: 1   MDAQRALLDELMGSARNLTEEERRGYKEVMWDDKEVCGFYMVRFCPHDLFVNTRSDLGPC 60

Query: 61  PRIHDQKLKESFEKSPRHDAFVPKFEAELAQFCEKLVMDLDRRVRRGRERLSQEVEPAPP 120
           PRIHDQKLKESF KSPRHDAFVPKFEAELAQFCEKLVMDLDRRVRRGRERLSQEVEPAPP
Sbjct: 61  PRIHDQKLKESFVKSPRHDAFVPKFEAELAQFCEKLVMDLDRRVRRGRERLSQEVEPAPP 120

Query: 121 SPLSAEKAEQLSVLEEKIKNLLEQVEALGEAGKVDEAEAPMRKVDLLNSEKTGLTQQTQN 180
           SPLSAEKAEQLSVLEEKIKNLLEQVEALGEAGKVDEAEA MRKVDLLNSEKT LTQQTQN
Sbjct: 121 SPLSAEKAEQLSVLEEKIKNLLEQVEALGEAGKVDEAEALMRKVDLLNSEKTALTQQTQN 180

Query: 181 DKVLMLAQEKKMALCEICGSVLVANDGAERVQSHVTGKQHVGYAMVRNFISDHKEAKEKE 240
           DKVLMLAQEKKMALCEICGS LVAND AERVQSHVTGKQHVGY MVRNFIS+HKEAKEKE
Sbjct: 181 DKVLMLAQEKKMALCEICGSFLVANDAAERVQSHVTGKQHVGYGMVRNFISEHKEAKEKE 240

Query: 241 MAEERLAW 249
           MAEERLAW
Sbjct: 241 MAEERLAW 248

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BLAST of Carg20778 vs. NCBI nr
Match: XP_022969924.1 (luc7-like protein 3 [Cucurbita maxima])

HSP 1 Score: 470.3 bits (1209), Expect = 5.8e-129
Identity = 239/248 (96.37%), Postives = 241/248 (97.18%), Query Frame = 0


Query: 1   MDAQRALLDEIMGSARNLTEEERRGYKEVMWDDKEVCGFYMVRFCPHHLFVNTRSDLGPC 60
           MDAQRALLDE+MGSARNLTEEERRGYKEVMWDDKEVCGFYMVRFCPH LFVNTRSDLGPC
Sbjct: 1   MDAQRALLDELMGSARNLTEEERRGYKEVMWDDKEVCGFYMVRFCPHDLFVNTRSDLGPC 60

Query: 61  PRIHDQKLKESFEKSPRHDAFVPKFEAELAQFCEKLVMDLDRRVRRGRERLSQEVEPAPP 120
           PRIHDQKLKESFEKSPRHDAFV KFEAELAQFCEKLVMDLDRRVRRGRERLSQEVEPAPP
Sbjct: 61  PRIHDQKLKESFEKSPRHDAFVLKFEAELAQFCEKLVMDLDRRVRRGRERLSQEVEPAPP 120

Query: 121 SPLSAEKAEQLSVLEEKIKNLLEQVEALGEAGKVDEAEAPMRKVDLLNSEKTGLTQQTQN 180
           SPLSAEKAEQLSVLEEKIKNLLEQVEALGEAGKVDEAEA MRKVDLLNSEKT LTQQTQN
Sbjct: 121 SPLSAEKAEQLSVLEEKIKNLLEQVEALGEAGKVDEAEALMRKVDLLNSEKTALTQQTQN 180

Query: 181 DKVLMLAQEKKMALCEICGSVLVANDGAERVQSHVTGKQHVGYAMVRNFISDHKEAKEKE 240
           DKVLMLAQEKKMALCEICGS LVAND AERVQSHVTGKQHVGY MVRNFIS+HKEAKEKE
Sbjct: 181 DKVLMLAQEKKMALCEICGSFLVANDAAERVQSHVTGKQHVGYGMVRNFISEHKEAKEKE 240

Query: 241 MAEERLAW 249
           MAEERLAW
Sbjct: 241 MAEERLAW 248

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BLAST of Carg20778 vs. NCBI nr
Match: XP_022929112.1 (luc7-like protein 3 isoform X1 [Cucurbita moschata])

HSP 1 Score: 460.3 bits (1183), Expect = 6.0e-126
Identity = 234/243 (96.30%), Postives = 236/243 (97.12%), Query Frame = 0


Query: 1   MDAQRALLDEIMGSARNLTEEERRGYKEVMWDDKEVCGFYMVRFCPHHLFVNTRSDLGPC 60
           MDAQRALLDE+MGSARNLTEEERRGYKEVMWDDKEVCGFYMVRFCPH LFVNTRSDLGPC
Sbjct: 1   MDAQRALLDELMGSARNLTEEERRGYKEVMWDDKEVCGFYMVRFCPHDLFVNTRSDLGPC 60

Query: 61  PRIHDQKLKESFEKSPRHDAFVPKFEAELAQFCEKLVMDLDRRVRRGRERLSQEVEPAPP 120
           PRIHDQKLKESF KSPRHDAFVPKFEAELAQFCEKLVMDLDRRVRRGRERLSQEVEPAPP
Sbjct: 61  PRIHDQKLKESFVKSPRHDAFVPKFEAELAQFCEKLVMDLDRRVRRGRERLSQEVEPAPP 120

Query: 121 SPLSAEKAEQLSVLEEKIKNLLEQVEALGEAGKVDEAEAPMRKVDLLNSEKTGLTQQTQN 180
           SPLSAEKAEQLSVLEEKIKNLLEQVEALGEAGKVDEAEA MRKVDLLNSEKT LTQQTQN
Sbjct: 121 SPLSAEKAEQLSVLEEKIKNLLEQVEALGEAGKVDEAEALMRKVDLLNSEKTALTQQTQN 180

Query: 181 DKVLMLAQEKKMALCEICGSVLVANDGAERVQSHVTGKQHVGYAMVRNFISDHKEAKEKE 240
           DKVLMLAQEKKMALCEICGS LVAND AERVQSHVTGKQHVGY MVRNFIS+HKEAKEKE
Sbjct: 181 DKVLMLAQEKKMALCEICGSFLVANDAAERVQSHVTGKQHVGYGMVRNFISEHKEAKEKE 240

Query: 241 MAE 244
           MAE
Sbjct: 241 MAE 243

[Close]

BLAST of Carg20778 vs. NCBI nr
Match: XP_022958228.1 (luc7-like protein 3 [Cucurbita moschata] >XP_022958229.1 luc7-like protein 3 [Cucurbita moschata] >XP_022995734.1 luc7-like protein 3 [Cucurbita maxima] >XP_022995735.1 luc7-like protein 3 [Cucurbita maxima] >XP_023533430.1 luc7-like protein 3 [Cucurbita pepo subsp. pepo] >XP_023533431.1 luc7-like protein 3 [Cucurbita pepo subsp. pepo])

HSP 1 Score: 445.7 bits (1145), Expect = 1.5e-121
Identity = 223/239 (93.31%), Postives = 233/239 (97.49%), Query Frame = 0


Query: 1   MDAQRALLDEIMGSARNLTEEERRGYKEVMWDDKEVCGFYMVRFCPHHLFVNTRSDLGPC 60
           MDAQRALLDE+MGSARNLTEEERRGYKEVMWDDKEVCGFYMVRFCPH LFVNTRSDLGPC
Sbjct: 1   MDAQRALLDELMGSARNLTEEERRGYKEVMWDDKEVCGFYMVRFCPHDLFVNTRSDLGPC 60

Query: 61  PRIHDQKLKESFEKSPRHDAFVPKFEAELAQFCEKLVMDLDRRVRRGRERLSQEVEPAPP 120
           PRIHDQKLKESFEKSPRHDA+VPKFEAELAQFCEKLVMDLDRRVRRGRERL+QEVEPAPP
Sbjct: 61  PRIHDQKLKESFEKSPRHDAYVPKFEAELAQFCEKLVMDLDRRVRRGRERLAQEVEPAPP 120

Query: 121 SPLSAEKAEQLSVLEEKIKNLLEQVEALGEAGKVDEAEAPMRKVDLLNSEKTGLTQQTQN 180
           +PLSAEK+EQLSVLEEKIKNLLEQVEALGEAGKVDEAEA MRKVD+LN+EKT L+QQTQN
Sbjct: 121 TPLSAEKSEQLSVLEEKIKNLLEQVEALGEAGKVDEAEALMRKVDVLNAEKTALSQQTQN 180

Query: 181 DKVLMLAQEKKMALCEICGSVLVANDGAERVQSHVTGKQHVGYAMVRNFISDHKEAKEK 240
           DKVLMLAQEKKMALCEICGS LVAND AERVQSHVTGKQHVGY MVR+FIS+HKEAKEK
Sbjct: 181 DKVLMLAQEKKMALCEICGSFLVANDAAERVQSHVTGKQHVGYGMVRDFISEHKEAKEK 239

[Close]

BLAST of Carg20778 vs. TAIR10
Match: AT5G51410.1 (LUC7 N_terminus domain-containing protein)

HSP 1 Score: 384.8 bits (987), Expect = 5.8e-107
Identity = 195/246 (79.27%), Postives = 216/246 (87.80%), Query Frame = 0


Query: 1   MDAQRALLDEIMGSARNLTEEERRGYKEVMWDDKEVCGFYMVRFCPHHLFVNTRSDLGPC 60
           MDAQRALLDE+MG+ARNLT+EERRG+KEV WDD+EVC FYMVRFCPH LFVNT+SDLG C
Sbjct: 1   MDAQRALLDELMGAARNLTDEERRGFKEVKWDDREVCAFYMVRFCPHDLFVNTKSDLGAC 60

Query: 61  PRIHDQKLKESFEKSPRHDAFVPKFEAELAQFCEKLVMDLDRRVRRGRERLSQEVEPAPP 120
            RIHD KLKESFE SPRHD++VPKFEAELAQFCEKLV DLDR+VRRGRERL+QEVEP PP
Sbjct: 61  SRIHDPKLKESFENSPRHDSYVPKFEAELAQFCEKLVNDLDRKVRRGRERLAQEVEPVPP 120

Query: 121 SPLSAEKAEQLSVLEEKIKNLLEQVEALGEAGKVDEAEAPMRKVDLLNSEKTGLTQQTQN 180
             LSAEKAEQLSVLEEK+KNLLEQVEALGE GKVDEAEA MRKV+ LN+EKT L Q+   
Sbjct: 121 PSLSAEKAEQLSVLEEKVKNLLEQVEALGEEGKVDEAEALMRKVEGLNAEKTVLLQR-PT 180

Query: 181 DKVLMLAQEKKMALCEICGSVLVANDGAERVQSHVTGKQHVGYAMVRNFISDHKEAKEKE 240
           DKVL +AQEKKMALCE+CGS LVAND  ER QSHVTGKQHVGY +VR+FI++ K AK+K 
Sbjct: 181 DKVLAMAQEKKMALCEVCGSFLVANDAVERTQSHVTGKQHVGYGLVRDFIAEQKAAKDKG 240

Query: 241 MAEERL 247
             EERL
Sbjct: 241 KEEERL 245

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BLAST of Carg20778 vs. TAIR10
Match: AT5G17440.1 (LUC7 related protein)

HSP 1 Score: 103.2 bits (256), Expect = 3.4e-22
Identity = 84/331 (25.38%), Postives = 142/331 (42.90%), Query Frame = 0


Query: 1   MDAQRALLDEIMGSARN--LTEEERRGYKEVMWDDKEVCGFYMVRFCPHHLFVNTRSDLG 60
           MDA R  LD +MG+ RN  +TE  R+ Y      D++VC  Y+   CPH LF  T+ D+G
Sbjct: 1   MDAMRKQLDVLMGANRNGDVTEVNRKYY------DRDVCRLYLSGLCPHELFQLTKMDMG 60

Query: 61  PCPRIHDQKLKESFEKSPRHDAFVPKFEAELAQFCEKLVMDLDRRVRRGRERLSQE---- 120
           PCP++H  +L++ ++ +      V  ++ EL    ++L+++ DR++ R   RL +E    
Sbjct: 61  PCPKVHSLQLRKEYKDAKAKG--VDNYDRELEDAIDRLIVECDRKIGRALNRLQEEDAKA 120

Query: 121 -----VEPAPPSP-------------------------------------LSAEKAEQLS 180
                V     SP                                     +  ++A+  +
Sbjct: 121 AIAISVTEFTQSPEILELSKQIKEKMKEADLHDLEGKTDLKIRALELVEEMRTKRADLQA 180

Query: 181 VL--------------------------------EEKIKNLLEQVEALGEAGKVDEAEAP 240
           VL                                +E I   L++ E LGE G VDEA+  
Sbjct: 181 VLLLDAFNKDRTSLQQAVPAQQPAATLPPPDPRTQEMINEKLKKAEELGEQGMVDEAQKA 240

Query: 241 MRKVDL---LNSEKTGLTQQTQNDKVLMLAQEKKMALCEICGSVLVANDGAERVQSHVTG 246
           + + +    L + +  +   T+     +   ++K+ LC+ICG+ L   D   R+  H  G
Sbjct: 241 LEEAEALKKLTARQEPVVDSTKYTAADVRITDQKLRLCDICGAFLSVYDSDRRLADHFGG 300

[Close]

BLAST of Carg20778 vs. TAIR10
Match: AT3G03340.1 (LUC7 related protein)

HSP 1 Score: 98.6 bits (244), Expect = 8.3e-21
Identity = 78/320 (24.38%), Postives = 131/320 (40.94%), Query Frame = 0


Query: 1   MDAQRALLDEIMGSARN--LTEEERRGYKEVMWDDKEVCGFYMVRFCPHHLFVNTRSDLG 60
           MDA R  LD +MG+ RN  + E  R+ Y      D++VC  Y+   CPH LF  T+ D+G
Sbjct: 1   MDAIRKQLDVLMGANRNGDVQEVNRKYY------DRDVCRLYLSGLCPHDLFQLTKMDMG 60

Query: 61  PCPRIHDQKLKESFEKSPRHDAFVPKFEAELAQFCEKLVMDLDRRVRRGRERLSQE---- 120
           PCP++H  +L++ + ++      V  ++ EL    ++L+++ DR++ R  +RL +E    
Sbjct: 61  PCPKVHSLQLRKEYREARAKG--VDNYDRELEDAIDRLIVECDRKIGRALKRLQEEDAKA 120

Query: 121 ------------------------------------------------------------ 180
                                                                       
Sbjct: 121 AIAISVSEVTQSPEILELSEKIKEKMKEADIHDLEGKMDLKIRALELVEEMRTKRADQQA 180

Query: 181 --------------VEPAPPSPLSAEKAEQLSVLEEKIKNLLEQVEALGEAGKVDEAEAP 238
                          +P P  P S+E        +E I   L++ E LGE G VDEA+  
Sbjct: 181 VLLLEAFNKDRASLPQPVPAQPPSSELPPPDPRTQEMINEKLKKAEDLGEQGMVDEAQKA 240

[Close]

BLAST of Carg20778 vs. Swiss-Prot
Match: sp|Q3SX41|LC7L3_BOVIN (Luc7-like protein 3 OS=Bos taurus OX=9913 GN=LUC7L3 PE=2 SV=1)

HSP 1 Score: 179.5 bits (454), Expect = 6.7e-44
Identity = 95/231 (41.13%), Postives = 144/231 (62.34%), Query Frame = 0


Query: 7   LLDEIMGSARNLTEEERRGYKEVMWDDKEVCGFYMVRFCPHHLFVNTRSDLGPCPRIHDQ 66
           LLDE+MG  RNL  +E+R    V WD + VC +Y+  FCP  LF NTRSDLGPC +IHD+
Sbjct: 7   LLDELMGRDRNLAPDEKR--SNVRWDHESVCKYYLCGFCPAELFTNTRSDLGPCEKIHDE 66

Query: 67  KLKESFEKSPRHDAFVPKFEAELAQFCEKLVMDLDRRVRRGRER--LSQEVEPAPPSPLS 126
            L++ +EKS R       +E +  ++ + L+ +++RR+RRG  R  LSQ  + +  +  +
Sbjct: 67  NLRKQYEKSSRF--MKVGYERDFLRYLQSLLAEVERRIRRGHARLALSQNQQSSGAAGPT 126

Query: 127 AEKAEQLSVLEEKIKNLLEQVEALGEAGKVDEAEAPMRKVDLLNSEKTGLTQQTQNDKVL 186
            +  E++ VL +KI  LL+Q+E LG  GKV+EA+  M+ V+ L  E+  L + T +    
Sbjct: 127 GKNEEKIQVLTDKIDVLLQQIEELGSEGKVEEAQGMMKLVEQLKEERE-LLRSTTSTIES 186

Query: 187 MLAQEKKMALCEICGSVLVANDGAERVQSHVTGKQHVGYAMVRNFISDHKE 236
             AQEK+M +CE+CG+ L+  D   RV  H+ GKQH+GYA ++  + + KE
Sbjct: 187 FAAQEKQMEVCEVCGAFLIVGDAQSRVDDHLMGKQHMGYAKIKATVEELKE 232

[Close]

BLAST of Carg20778 vs. Swiss-Prot
Match: sp|O95232|LC7L3_HUMAN (Luc7-like protein 3 OS=Homo sapiens OX=9606 GN=LUC7L3 PE=1 SV=2)

HSP 1 Score: 179.5 bits (454), Expect = 6.7e-44
Identity = 95/231 (41.13%), Postives = 144/231 (62.34%), Query Frame = 0


Query: 7   LLDEIMGSARNLTEEERRGYKEVMWDDKEVCGFYMVRFCPHHLFVNTRSDLGPCPRIHDQ 66
           LLDE+MG  RNL  +E+R    V WD + VC +Y+  FCP  LF NTRSDLGPC +IHD+
Sbjct: 7   LLDELMGRDRNLAPDEKR--SNVRWDHESVCKYYLCGFCPAELFTNTRSDLGPCEKIHDE 66

Query: 67  KLKESFEKSPRHDAFVPKFEAELAQFCEKLVMDLDRRVRRGRER--LSQEVEPAPPSPLS 126
            L++ +EKS R       +E +  ++ + L+ +++RR+RRG  R  LSQ  + +  +  +
Sbjct: 67  NLRKQYEKSSRF--MKVGYERDFLRYLQSLLAEVERRIRRGHARLALSQNQQSSGAAGPT 126

Query: 127 AEKAEQLSVLEEKIKNLLEQVEALGEAGKVDEAEAPMRKVDLLNSEKTGLTQQTQNDKVL 186
            +  E++ VL +KI  LL+Q+E LG  GKV+EA+  M+ V+ L  E+  L + T +    
Sbjct: 127 GKNEEKIQVLTDKIDVLLQQIEELGSEGKVEEAQGMMKLVEQLKEERE-LLRSTTSTIES 186

Query: 187 MLAQEKKMALCEICGSVLVANDGAERVQSHVTGKQHVGYAMVRNFISDHKE 236
             AQEK+M +CE+CG+ L+  D   RV  H+ GKQH+GYA ++  + + KE
Sbjct: 187 FAAQEKQMEVCEVCGAFLIVGDAQSRVDDHLMGKQHMGYAKIKATVEELKE 232

[Close]

BLAST of Carg20778 vs. Swiss-Prot
Match: sp|Q5SUF2|LC7L3_MOUSE (Luc7-like protein 3 OS=Mus musculus OX=10090 GN=Luc7l3 PE=1 SV=1)

HSP 1 Score: 179.5 bits (454), Expect = 6.7e-44
Identity = 95/231 (41.13%), Postives = 144/231 (62.34%), Query Frame = 0


Query: 7   LLDEIMGSARNLTEEERRGYKEVMWDDKEVCGFYMVRFCPHHLFVNTRSDLGPCPRIHDQ 66
           LLDE+MG  RNL  +E+R    V WD + VC +Y+  FCP  LF NTRSDLGPC +IHD+
Sbjct: 7   LLDELMGRDRNLAPDEKR--SNVRWDHESVCKYYLCGFCPAELFTNTRSDLGPCEKIHDE 66

Query: 67  KLKESFEKSPRHDAFVPKFEAELAQFCEKLVMDLDRRVRRGRER--LSQEVEPAPPSPLS 126
            L++ +EKS R       +E +  ++ + L+ +++RR+RRG  R  LSQ  + +  +  +
Sbjct: 67  NLRKQYEKSSRF--MKVGYERDFLRYLQSLLAEVERRIRRGHARLALSQNQQSSGAAGPT 126

Query: 127 AEKAEQLSVLEEKIKNLLEQVEALGEAGKVDEAEAPMRKVDLLNSEKTGLTQQTQNDKVL 186
            +  E++ VL +KI  LL+Q+E LG  GKV+EA+  M+ V+ L  E+  L + T +    
Sbjct: 127 GKNEEKIQVLTDKIDVLLQQIEELGSEGKVEEAQGMMKLVEQLKEERE-LLRSTTSTIES 186

Query: 187 MLAQEKKMALCEICGSVLVANDGAERVQSHVTGKQHVGYAMVRNFISDHKE 236
             AQEK+M +CE+CG+ L+  D   RV  H+ GKQH+GYA ++  + + KE
Sbjct: 187 FAAQEKQMEVCEVCGAFLIVGDAQSRVDDHLMGKQHMGYAKIKATVEELKE 232

[Close]

BLAST of Carg20778 vs. Swiss-Prot
Match: sp|Q5R8W6|LC7L3_PONAB (Luc7-like protein 3 OS=Pongo abelii OX=9601 GN=LUC7L3 PE=2 SV=1)

HSP 1 Score: 179.5 bits (454), Expect = 6.7e-44
Identity = 95/231 (41.13%), Postives = 144/231 (62.34%), Query Frame = 0


Query: 7   LLDEIMGSARNLTEEERRGYKEVMWDDKEVCGFYMVRFCPHHLFVNTRSDLGPCPRIHDQ 66
           LLDE+MG  RNL  +E+R    V WD + VC +Y+  FCP  LF NTRSDLGPC +IHD+
Sbjct: 7   LLDELMGRDRNLAPDEKR--SNVRWDHESVCKYYLCGFCPAELFTNTRSDLGPCEKIHDE 66

Query: 67  KLKESFEKSPRHDAFVPKFEAELAQFCEKLVMDLDRRVRRGRER--LSQEVEPAPPSPLS 126
            L++ +EKS R       +E +  ++ + L+ +++RR+RRG  R  LSQ  + +  +  +
Sbjct: 67  NLRKQYEKSSRF--MKVGYERDFLRYLQSLLAEVERRIRRGHARLALSQNQQSSGAAGPT 126

Query: 127 AEKAEQLSVLEEKIKNLLEQVEALGEAGKVDEAEAPMRKVDLLNSEKTGLTQQTQNDKVL 186
            +  E++ VL +KI  LL+Q+E LG  GKV+EA+  M+ V+ L  E+  L + T +    
Sbjct: 127 GKNEEKIQVLTDKIDVLLQQIEELGSEGKVEEAQGMMKLVEQLKEERE-LLRSTTSTIES 186

Query: 187 MLAQEKKMALCEICGSVLVANDGAERVQSHVTGKQHVGYAMVRNFISDHKE 236
             AQEK+M +CE+CG+ L+  D   RV  H+ GKQH+GYA ++  + + KE
Sbjct: 187 FAAQEKQMEVCEVCGAFLIVGDAQSRVDDHLMGKQHMGYAKIKATVEELKE 232

[Close]

BLAST of Carg20778 vs. Swiss-Prot
Match: sp|Q9NQ29|LUC7L_HUMAN (Putative RNA-binding protein Luc7-like 1 OS=Homo sapiens OX=9606 GN=LUC7L PE=1 SV=1)

HSP 1 Score: 124.8 bits (312), Expect = 1.9e-27
Identity = 79/241 (32.78%), Postives = 128/241 (53.11%), Query Frame = 0


Query: 5   RALLDEIMGSARNLTEEERRGYKEVMWDDKEVCGFYMVRFCPHHLFVNTRSDLGPCPRIH 64
           RALLD++MG+AR+  E  +R    V + D  VC  +++  CPH +   TR DLG C +IH
Sbjct: 8   RALLDQLMGTARDGDETRQR----VKFTDDRVCKSHLLDCCPHDILAGTRMDLGECTKIH 67

Query: 65  DQKLKESFE-KSPRHDAFVPKFEAELAQFCEKLVMDLDRRVRRGRERLSQEVEPAPPSPL 124
           D  L+  +E  S   D F   FE +     E  + + DRR    ++RL++  E      +
Sbjct: 68  DLALRADYEIASKERDLF---FELDAMDHLESFIAECDRRTELAKKRLAETQE-----EI 127

Query: 125 SAE---KAEQLSVLEEKIKNLLEQVEALGEAGKVDEAEAPMRKVDLLNSEKTGLTQQTQN 184
           SAE   KAE++  L E+I  LL + E LG  G VDE++  + +V+ + ++K    ++ +N
Sbjct: 128 SAEVSAKAEKVHELNEEIGKLLAKAEQLGAEGNVDESQKILMEVEKVRAKKKEAEEEYRN 187

Query: 185 DKVLMLAQEKKMALCEICGSVLVANDGAERVQSHVTGKQHVGYAMVRNFISD-HKEAKEK 241
                  Q++K+ +CE+C + L  +D   R+  H  GK H+G+  +R  +    K   EK
Sbjct: 188 SMPASSFQQQKLRVCEVCSAYLGLHDNDRRLADHFGGKLHLGFIQIREKLDQLRKTVAEK 236

[Close]

BLAST of Carg20778 vs. TrEMBL
Match: tr|A0A0A0KRS2|A0A0A0KRS2_CUCSA (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_5G172900 PE=4 SV=1)

HSP 1 Score: 445.3 bits (1144), Expect = 1.3e-121
Identity = 224/239 (93.72%), Postives = 232/239 (97.07%), Query Frame = 0


Query: 1   MDAQRALLDEIMGSARNLTEEERRGYKEVMWDDKEVCGFYMVRFCPHHLFVNTRSDLGPC 60
           MDAQRALLDE+MGSARNLTEEERRGYKEVMWDDKEVCGFYMVRFCPH LFVNTRSDLGPC
Sbjct: 1   MDAQRALLDELMGSARNLTEEERRGYKEVMWDDKEVCGFYMVRFCPHDLFVNTRSDLGPC 60

Query: 61  PRIHDQKLKESFEKSPRHDAFVPKFEAELAQFCEKLVMDLDRRVRRGRERLSQEVEPAPP 120
            RIHDQKLKESFEKSPRHDA+VPKFEAELAQFCEKLVMDLDRRVRRGRERL+QEVEPAPP
Sbjct: 61  TRIHDQKLKESFEKSPRHDAYVPKFEAELAQFCEKLVMDLDRRVRRGRERLAQEVEPAPP 120

Query: 121 SPLSAEKAEQLSVLEEKIKNLLEQVEALGEAGKVDEAEAPMRKVDLLNSEKTGLTQQTQN 180
           +PLSAEK+EQLSVLEEKIKNLLEQVEALGEAGKVDEAEA MRKVDLLN+EKT LTQQTQN
Sbjct: 121 TPLSAEKSEQLSVLEEKIKNLLEQVEALGEAGKVDEAEALMRKVDLLNTEKTALTQQTQN 180

Query: 181 DKVLMLAQEKKMALCEICGSVLVANDGAERVQSHVTGKQHVGYAMVRNFISDHKEAKEK 240
           DKVLMLAQEKKMALCEICGS LVAND AERVQSHVTGKQHVGY MVR+FIS+HKEAKEK
Sbjct: 181 DKVLMLAQEKKMALCEICGSFLVANDAAERVQSHVTGKQHVGYGMVRDFISEHKEAKEK 239

[Close]

BLAST of Carg20778 vs. TrEMBL
Match: tr|A0A1S3CT91|A0A1S3CT91_CUCME (luc7-like protein 3 OS=Cucumis melo OX=3656 GN=LOC103504633 PE=4 SV=1)

HSP 1 Score: 442.6 bits (1137), Expect = 8.5e-121
Identity = 223/239 (93.31%), Postives = 230/239 (96.23%), Query Frame = 0


Query: 1   MDAQRALLDEIMGSARNLTEEERRGYKEVMWDDKEVCGFYMVRFCPHHLFVNTRSDLGPC 60
           MDAQRALLDE+MGSARNLTEEERRGYKEVMWDDKEVCGFYMVRFCPH LFVNTRSDLGPC
Sbjct: 1   MDAQRALLDELMGSARNLTEEERRGYKEVMWDDKEVCGFYMVRFCPHDLFVNTRSDLGPC 60

Query: 61  PRIHDQKLKESFEKSPRHDAFVPKFEAELAQFCEKLVMDLDRRVRRGRERLSQEVEPAPP 120
            RIHD KLKESFEKSPRHDA+VPKFEAELAQFCEKLVMDLDRRVRRGRERL+QEVEPAPP
Sbjct: 61  TRIHDPKLKESFEKSPRHDAYVPKFEAELAQFCEKLVMDLDRRVRRGRERLAQEVEPAPP 120

Query: 121 SPLSAEKAEQLSVLEEKIKNLLEQVEALGEAGKVDEAEAPMRKVDLLNSEKTGLTQQTQN 180
           +PLSAEK EQLSVLEEKIKNLLEQVEALGEAGKVDEAEA MRKVDLLN+EKT LTQQTQN
Sbjct: 121 TPLSAEKTEQLSVLEEKIKNLLEQVEALGEAGKVDEAEALMRKVDLLNTEKTALTQQTQN 180

Query: 181 DKVLMLAQEKKMALCEICGSVLVANDGAERVQSHVTGKQHVGYAMVRNFISDHKEAKEK 240
           DKVLMLAQEKKMALCEICGS LVAND AERVQSHVTGKQHVGY MVR+FIS+HKEAKEK
Sbjct: 181 DKVLMLAQEKKMALCEICGSFLVANDAAERVQSHVTGKQHVGYGMVRDFISEHKEAKEK 239

[Close]

BLAST of Carg20778 vs. TrEMBL
Match: tr|A0A2P5QGS0|A0A2P5QGS0_GOSBA (Uncharacterized protein OS=Gossypium barbadense OX=3634 GN=GOBAR_DD29321 PE=4 SV=1)

HSP 1 Score: 423.7 bits (1088), Expect = 4.1e-115
Identity = 208/244 (85.25%), Postives = 227/244 (93.03%), Query Frame = 0


Query: 1   MDAQRALLDEIMGSARNLTEEERRGYKEVMWDDKEVCGFYMVRFCPHHLFVNTRSDLGPC 60
           MDAQRALLDE+MG+ARNLT+EE++GY+E+ WDDKEVC FYMVRFCPH LFVNTRSDLGPC
Sbjct: 1   MDAQRALLDELMGTARNLTDEEKKGYREIRWDDKEVCAFYMVRFCPHDLFVNTRSDLGPC 60

Query: 61  PRIHDQKLKESFEKSPRHDAFVPKFEAELAQFCEKLVMDLDRRVRRGRERLSQEVEPAPP 120
           PR+HDQKLKESFEKSPRHDA+VPKFEAELAQFCEKLVMDLDRRVRRGRERL+QEVEPAPP
Sbjct: 61  PRVHDQKLKESFEKSPRHDAYVPKFEAELAQFCEKLVMDLDRRVRRGRERLAQEVEPAPP 120

Query: 121 SPLSAEKAEQLSVLEEKIKNLLEQVEALGEAGKVDEAEAPMRKVDLLNSEKTGLTQQTQN 180
           +PLSAEK+EQLSV+EEKIKNLLEQVE LGEAGKVDEAEA MRKV+ LN+EKT L QQ QN
Sbjct: 121 APLSAEKSEQLSVMEEKIKNLLEQVETLGEAGKVDEAEALMRKVEALNAEKTALAQQPQN 180

Query: 181 DKVLMLAQEKKMALCEICGSVLVANDGAERVQSHVTGKQHVGYAMVRNFISDHKEAKEKE 240
           DKVLMLAQEKKMALCE+CGS LVAND AER QSHVTGKQH+GY MVR+FIS+ KEAKEK 
Sbjct: 181 DKVLMLAQEKKMALCEVCGSFLVANDAAERTQSHVTGKQHIGYGMVRDFISEFKEAKEKA 240

Query: 241 MAEE 245
             EE
Sbjct: 241 REEE 244

[Close]

BLAST of Carg20778 vs. TrEMBL
Match: tr|A0A061G0Z3|A0A061G0Z3_THECC (LUC7 N_terminus domain-containing protein isoform 1 OS=Theobroma cacao OX=3641 GN=TCM_014922 PE=4 SV=1)

HSP 1 Score: 422.9 bits (1086), Expect = 7.0e-115
Identity = 207/239 (86.61%), Postives = 227/239 (94.98%), Query Frame = 0


Query: 1   MDAQRALLDEIMGSARNLTEEERRGYKEVMWDDKEVCGFYMVRFCPHHLFVNTRSDLGPC 60
           MDAQRALLDE+MG+ARNLTEEE++GY+E+ WDDKEVCGFYMVRFCPH LFVNTRSDLGPC
Sbjct: 1   MDAQRALLDELMGTARNLTEEEKKGYREIRWDDKEVCGFYMVRFCPHDLFVNTRSDLGPC 60

Query: 61  PRIHDQKLKESFEKSPRHDAFVPKFEAELAQFCEKLVMDLDRRVRRGRERLSQEVEPAPP 120
           PR+HDQKLKESFEKSPRHDA+VPKFEAELAQFCEKLVMDLDRRVRRGRERL+QEVEPAPP
Sbjct: 61  PRVHDQKLKESFEKSPRHDAYVPKFEAELAQFCEKLVMDLDRRVRRGRERLAQEVEPAPP 120

Query: 121 SPLSAEKAEQLSVLEEKIKNLLEQVEALGEAGKVDEAEAPMRKVDLLNSEKTGLTQQTQN 180
           +P+SAEK+EQLSVLEEKIKNLLEQVE LGE+GKVDEAEA MRKV++LN+EKT LTQQ QN
Sbjct: 121 APVSAEKSEQLSVLEEKIKNLLEQVENLGESGKVDEAEALMRKVEVLNAEKTALTQQPQN 180

Query: 181 DKVLMLAQEKKMALCEICGSVLVANDGAERVQSHVTGKQHVGYAMVRNFISDHKEAKEK 240
           DKVLMLAQEKKMALCE+CGS LVAND AER QSHVTGKQH+GY MVR+FIS+ K AKEK
Sbjct: 181 DKVLMLAQEKKMALCEVCGSFLVANDAAERTQSHVTGKQHIGYGMVRDFISEFKAAKEK 239

[Close]

BLAST of Carg20778 vs. TrEMBL
Match: tr|A0A067FQN1|A0A067FQN1_CITSI (Uncharacterized protein OS=Citrus sinensis OX=2711 GN=CISIN_1g015276mg PE=4 SV=1)

HSP 1 Score: 420.2 bits (1079), Expect = 4.5e-114
Identity = 207/239 (86.61%), Postives = 226/239 (94.56%), Query Frame = 0


Query: 1   MDAQRALLDEIMGSARNLTEEERRGYKEVMWDDKEVCGFYMVRFCPHHLFVNTRSDLGPC 60
           MDAQRALLDE+MG+ARNLTEEE++ YKE+ WDDKEVC FYMVRFCPH LFVNTRSDLGPC
Sbjct: 1   MDAQRALLDELMGAARNLTEEEKKEYKEIKWDDKEVCPFYMVRFCPHDLFVNTRSDLGPC 60

Query: 61  PRIHDQKLKESFEKSPRHDAFVPKFEAELAQFCEKLVMDLDRRVRRGRERLSQEVEPAPP 120
           PRIHDQKLKESFEKSPRHDA+VPKFEAELAQFCEKLVMDLDRRVRRGRERLSQEVEPAPP
Sbjct: 61  PRIHDQKLKESFEKSPRHDAYVPKFEAELAQFCEKLVMDLDRRVRRGRERLSQEVEPAPP 120

Query: 121 SPLSAEKAEQLSVLEEKIKNLLEQVEALGEAGKVDEAEAPMRKVDLLNSEKTGLTQQTQN 180
            P+SAEK+EQLSVLEEKIKNLLEQVE LGEAGKVDEAEA MRKV++LN EKT LTQQ+QN
Sbjct: 121 PPISAEKSEQLSVLEEKIKNLLEQVETLGEAGKVDEAEALMRKVEILNVEKTTLTQQSQN 180

Query: 181 DKVLMLAQEKKMALCEICGSVLVANDGAERVQSHVTGKQHVGYAMVRNFISDHKEAKEK 240
           DKVLM+AQEKKMALCEICGS LVAND AER QSH++GKQH+GY MVR+FI+++KEAKEK
Sbjct: 181 DKVLMMAQEKKMALCEICGSFLVANDAAERTQSHISGKQHIGYGMVRDFITEYKEAKEK 239

The following BLAST results are available for this feature:

BLAST of Carg20778 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_023550802.1	4.0e-130	96.77	luc7-like protein 3 [Cucurbita pepo subsp. pepo]	[more]
XP_022929113.1	2.6e-129	96.37	luc7-like protein 3 isoform X2 [Cucurbita moschata] >XP_022929114.1 luc7-like pr...	[more]
XP_022969924.1	5.8e-129	96.37	luc7-like protein 3 [Cucurbita maxima]	[more]
XP_022929112.1	6.0e-126	96.30	luc7-like protein 3 isoform X1 [Cucurbita moschata]	[more]
XP_022958228.1	1.5e-121	93.31	luc7-like protein 3 [Cucurbita moschata] >XP_022958229.1 luc7-like protein 3 [Cu...	[more]

BLAST of Carg20778 vs. TAIR10


Match Name	E-value	Identity	Description
AT5G51410.1	5.8e-107	79.27	LUC7 N_terminus domain-containing protein	[more]
AT5G17440.1	3.4e-22	25.38	LUC7 related protein	[more]
AT3G03340.1	8.3e-21	24.38	LUC7 related protein	[more]

BLAST of Carg20778 vs. Swiss-Prot


Match Name	E-value	Identity	Description
sp\|Q3SX41\|LC7L3_BOVIN	6.7e-44	41.13	Luc7-like protein 3 OS=Bos taurus OX=9913 GN=LUC7L3 PE=2 SV=1	[more]
sp\|O95232\|LC7L3_HUMAN	6.7e-44	41.13	Luc7-like protein 3 OS=Homo sapiens OX=9606 GN=LUC7L3 PE=1 SV=2	[more]
sp\|Q5SUF2\|LC7L3_MOUSE	6.7e-44	41.13	Luc7-like protein 3 OS=Mus musculus OX=10090 GN=Luc7l3 PE=1 SV=1	[more]
sp\|Q5R8W6\|LC7L3_PONAB	6.7e-44	41.13	Luc7-like protein 3 OS=Pongo abelii OX=9601 GN=LUC7L3 PE=2 SV=1	[more]
sp\|Q9NQ29\|LUC7L_HUMAN	1.9e-27	32.78	Putative RNA-binding protein Luc7-like 1 OS=Homo sapiens OX=9606 GN=LUC7L PE=1 S...	[more]

BLAST of Carg20778 vs. TrEMBL


Match Name	E-value	Identity	Description
tr\|A0A0A0KRS2\|A0A0A0KRS2_CUCSA	1.3e-121	93.72	Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_5G172900 PE=4 SV=1	[more]
tr\|A0A1S3CT91\|A0A1S3CT91_CUCME	8.5e-121	93.31	luc7-like protein 3 OS=Cucumis melo OX=3656 GN=LOC103504633 PE=4 SV=1	[more]
tr\|A0A2P5QGS0\|A0A2P5QGS0_GOSBA	4.1e-115	85.25	Uncharacterized protein OS=Gossypium barbadense OX=3634 GN=GOBAR_DD29321 PE=4 SV...	[more]
tr\|A0A061G0Z3\|A0A061G0Z3_THECC	7.0e-115	86.61	LUC7 N_terminus domain-containing protein isoform 1 OS=Theobroma cacao OX=3641 G...	[more]
tr\|A0A067FQN1\|A0A067FQN1_CITSI	4.5e-114	86.61	Uncharacterized protein OS=Citrus sinensis OX=2711 GN=CISIN_1g015276mg PE=4 SV=1	[more]

Annotated Terms

The following terms have been associated with this gene:

Vocabulary: **Cellular Component**
Term	Definition
GO:0005685	U1 snRNP

Vocabulary: **Molecular Function**
Term	Definition
GO:0003729	mRNA binding

Vocabulary: **Biological Process**
Term	Definition
GO:0006376	mRNA splice site selection

Vocabulary: **INTERPRO**
Term	Definition
IPR004882	Luc7-rel

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0006376	mRNA splice site selection
cellular_component	GO:0005685	U1 snRNP
molecular_function	GO:0003729	mRNA binding

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
Carg20778-RA	Carg20778-RA	mRNA

InterPro

Analysis Name: InterPro Annotations of silver-seed gourd
Date Performed: 2019-03-07


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
None	No IPR available	COILS	Coil	Coil	coord: 124..151
None	No IPR available	COILS	Coil	Coil	coord: 245..279
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 255..291
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 255..309
None	No IPR available	PANTHER	PTHR12375:SF18	LUC7-LIKE PROTEIN 3	coord: 1..304
IPR004882	Luc7-related	PFAM	PF03194	LUC7	coord: 2..250 e-value: 7.5E-80 score: 268.1
IPR004882	Luc7-related	PANTHER	PTHR12375	RNA-BINDING PROTEIN LUC7-RELATED	coord: 1..304

Synteny

The following gene(s) are orthologous to this gene:


Gene	Orthologue	Organism	Block
Carg20778	Cla002344	Watermelon (97103) v1	carwmB0737
Carg20778	Csa5G172900	Cucumber (Chinese Long) v2	carcuB0756
Carg20778	MELO3C005382	Melon (DHL92) v3.5.1	carmeB0735
Carg20778	ClCG01G005490	Watermelon (Charleston Gray)	carwcgB0716
Carg20778	CSPI05G08320	Wild cucumber (PI 183967)	carcpiB0773
Carg20778	Cucsa.166510	Cucumber (Gy14) v1	carcgyB0831
Carg20778	CmaCh02G010370	Cucurbita maxima (Rimu)	carcmaB1034
Carg20778	CmaCh15G014030	Cucurbita maxima (Rimu)	carcmaB1033
Carg20778	CmoCh02G010520	Cucurbita moschata (Rifu)	carcmoB1005
Carg20778	CmoCh15G014730	Cucurbita moschata (Rifu)	carcmoB1004
Carg20778	Lsi09G005800	Bottle gourd (USVL1VR-Ls)	carlsiB676
Carg20778	Cp4.1LG13g00380	Cucurbita pepo (Zucchini)	carcpeB1040
Carg20778	Cp4.1LG05g06790	Cucurbita pepo (Zucchini)	carcpeB1041
Carg20778	CsGy5G005710	Cucumber (Gy14) v2	carcgybB0735
Carg20778	MELO3C005382.2	Melon (DHL92) v3.6.1	carmedB0746
Carg20778	CsaV3_5G005710	Cucumber (Chinese Long) v3	carcucB0776
Carg20778	Cla97C01G005710	Watermelon (97103) v2	carwmbB0774
Carg20778	Bhi12G000495	Wax gourd	carwgoB0873

The following gene(s) are paralogous to this gene:


Gene	Paralogue	Organism	Block
Carg20778	Carg08439	Silver-seed gourd	carcarB584

The following block(s) are covering this gene:

None