CsGy5G004980 (gene) Cucumber (Gy14) v2

Overview
NameCsGy5G004980
Typegene
OrganismCucumis sativus (Cucumber (Gy14) v2)
DescriptionUncharacterized protein
LocationChr5 : 3191522 .. 3191743 (+)
Genome Viewer
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
ATGGCGAGTGAAGAGATGGCTCAGTTCAGCGGGGTAGTCGACATGCAAAGACGTTTCACTCATTCAAGGAAGAAAGAGGAAATTACTCTGCAATCCGGTCTGTTGAGCTTGAATTTTACTGAGTCGTCACGGCGATCTACTTCACTCGCTAGAAAATACAAAATGAAAAGCATAAAGGAAGAAGAAGAAGAGGATTGGAAGAGAAAAGAGTTTGAGGAATGA

mRNA sequence

ATGGCGAGTGAAGAGATGGCTCAGTTCAGCGGGGTAGTCGACATGCAAAGACGTTTCACTCATTCAAGGAAGAAAGAGGAAATTACTCTGCAATCCGGTCTGTTGAGCTTGAATTTTACTGAGTCGTCACGGCGATCTACTTCACTCGCTAGAAAATACAAAATGAAAAGCATAAAGGAAGAAGAAGAAGAGGATTGGAAGAGAAAAGAGTTTGAGGAATGA

Coding sequence (CDS)

ATGGCGAGTGAAGAGATGGCTCAGTTCAGCGGGGTAGTCGACATGCAAAGACGTTTCACTCATTCAAGGAAGAAAGAGGAAATTACTCTGCAATCCGGTCTGTTGAGCTTGAATTTTACTGAGTCGTCACGGCGATCTACTTCACTCGCTAGAAAATACAAAATGAAAAGCATAAAGGAAGAAGAAGAAGAGGATTGGAAGAGAAAAGAGTTTGAGGAATGA

Protein sequence

MASEEMAQFSGVVDMQRRFTHSRKKEEITLQSGLLSLNFTESSRRSTSLARKYKMKSIKEEEEEDWKRKEFEE
Homology
[Close]
BLAST of CsGy5G004980 vs. NCBI nr
Match: KGN50326.1 (hypothetical protein Csa_5G167180 [Cucumis sativus])

HSP 1 Score: 133.7 bits (335), Expect = 2.6e-28
Identity = 73/73 (100.00%), Postives = 73/73 (100.00%), Query Frame = 0 

Query: 1  MASEEMAQFSGVVDMQRRFTHSRKKEEITLQSGLLSLNFTESSRRSTSLARKYKMKSIKE 60
          MASEEMAQFSGVVDMQRRFTHSRKKEEITLQSGLLSLNFTESSRRSTSLARKYKMKSIKE
Sbjct: 1  MASEEMAQFSGVVDMQRRFTHSRKKEEITLQSGLLSLNFTESSRRSTSLARKYKMKSIKE 60

Query: 61 EEEEDWKRKEFEE 74
          EEEEDWKRKEFEE
Sbjct: 61 EEEEDWKRKEFEE 73

[Close]
BLAST of CsGy5G004980 vs. TrEMBL
Match: tr|A0A0A0KRH6|A0A0A0KRH6_CUCSA (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_5G167180 PE=4 SV=1)

HSP 1 Score: 133.7 bits (335), Expect = 1.7e-28
Identity = 73/73 (100.00%), Postives = 73/73 (100.00%), Query Frame = 0 

Query: 1  MASEEMAQFSGVVDMQRRFTHSRKKEEITLQSGLLSLNFTESSRRSTSLARKYKMKSIKE 60
          MASEEMAQFSGVVDMQRRFTHSRKKEEITLQSGLLSLNFTESSRRSTSLARKYKMKSIKE
Sbjct: 1  MASEEMAQFSGVVDMQRRFTHSRKKEEITLQSGLLSLNFTESSRRSTSLARKYKMKSIKE 60

Query: 61 EEEEDWKRKEFEE 74
          EEEEDWKRKEFEE
Sbjct: 61 EEEEDWKRKEFEE 73

The following BLAST results are available for this feature:
BLAST of CsGy5G004980 vs. NCBI nr
Match NameE-valueIdentityDescription
KGN50326.12.6e-28100.00hypothetical protein Csa_5G167180 [Cucumis sativus][more]
BLAST of CsGy5G004980 vs. TAIR10
Match NameE-valueIdentityDescription
BLAST of CsGy5G004980 vs. Swiss-Prot
Match NameE-valueIdentityDescription
BLAST of CsGy5G004980 vs. TrEMBL
Match NameE-valueIdentityDescription
tr|A0A0A0KRH6|A0A0A0KRH6_CUCSA1.7e-28100.00Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_5G167180 PE=4 SV=1[more]
GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
Category Term Accession Term Name
biological_process GO:0008150 biological_process
cellular_component GO:0005575 cellular_component
molecular_function GO:0003674 molecular_function
Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
CsGy5G004980.1CsGy5G004980.1mRNA


Synteny
The following gene(s) are orthologous to this gene:
GeneOrthologueOrganismBlock
CsGy5G004980Csa5G167180Cucumber (Chinese Long) v2cgybcuB224
CsGy5G004980MELO3C005460Melon (DHL92) v3.5.1cgybmeB301
CsGy5G004980ClCG01G004760Watermelon (Charleston Gray)cgybwcgB332
CsGy5G004980CSPI05G07520Wild cucumber (PI 183967)cgybcpiB226
CsGy5G004980MELO3C005460.2Melon (DHL92) v3.6.1cgybmedB301
CsGy5G004980CsaV3_5G004950Cucumber (Chinese Long) v3cgybcucB232
The following gene(s) are paralogous to this gene:

None

The following block(s) are covering this gene:
GeneOrganismBlock
CsGy5G004980Cucumber (Gy14) v2cgybcgybB126
CsGy5G004980Cucurbita maxima (Rimu)cgybcmaB601
CsGy5G004980Cucurbita maxima (Rimu)cgybcmaB636
CsGy5G004980Cucurbita maxima (Rimu)cgybcmaB671
CsGy5G004980Cucurbita moschata (Rifu)cgybcmoB573
CsGy5G004980Cucurbita moschata (Rifu)cgybcmoB598
CsGy5G004980Cucurbita moschata (Rifu)cgybcmoB614
CsGy5G004980Cucurbita pepo (Zucchini)cgybcpeB608
CsGy5G004980Cucurbita pepo (Zucchini)cgybcpeB692
CsGy5G004980Bottle gourd (USVL1VR-Ls)cgyblsiB294
CsGy5G004980Melon (DHL92) v3.5.1cgybmeB357
CsGy5G004980Watermelon (Charleston Gray)cgybwcgB372
CsGy5G004980Watermelon (97103) v1cgybwmB368
CsGy5G004980Watermelon (97103) v1cgybwmB388
CsGy5G004980Wild cucumber (PI 183967)cgybcpiB222
CsGy5G004980Silver-seed gourdcarcgybB0711
CsGy5G004980Silver-seed gourdcarcgybB1018
CsGy5G004980Cucumber (Chinese Long) v3cgybcucB228
CsGy5G004980Watermelon (97103) v2cgybwmbB319
CsGy5G004980Watermelon (97103) v2cgybwmbB378
CsGy5G004980Wax gourdcgybwgoB414
CsGy5G004980Wax gourdcgybwgoB435
CsGy5G004980Wax gourdcgybwgoB461