CsGy4G021730 (gene) Cucumber (Gy14) v2

Overview
NameCsGy4G021730
Typegene
OrganismCucumis sativus (Cucumber (Gy14) v2)
DescriptionUncharacterized protein
LocationChr4 : 28347396 .. 28349651 (-)
Genome Viewer
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: five_prime_UTRexonCDSthree_prime_UTR
Hold the cursor over a type above to highlight its positions in the sequence below.
CCCACTTGTTGATCCTACAACTCTCCACGTTTCATCATTAACATAATAATTGTTAATAAAAACGCACTCTTAAGAGGTAAAAATGGAAAAAATAAAAAGGAGAAGAAGAAGATCCACCGATTGAAGTTTACCGTAAATTGGAAAAATGGCTTACTCCAATCGATCTGTTGTTGCTTTCCGTTTTTCAAAAGCTTTGTTTGAACAATGCCATGGCGCTGCCGCTGCCGCTGCTGCTGTTCCTCCCTTCTCCCCCGCTCCCGCCGTTTCTATTTCTTATAAGGTAACTTTTGTAGGAATTGAAAACCAAAATTTTACTTTTTAATGTCCCCTTGCGTATGTTCTGCTTTTCATTTTATGATAGAAAAACCCAACATCCCATTTTGAATTTGATAGTATGATTATTTAAATATTTGTTTTTTGTTCATTTAATTACTATCTATTGATTGATTTTGTTTTCTTTTAATTTTGTTCGTTTGCTTATATACTATTAGGGGGAAGATCTCGATCCTAATAACATTGCTTTGAGAATCAAATTTCGATAATTAGTATGTTAAAGCAAACATTATTAAATAAAAATAGAAATATATAAGGTTAGTGATTGATTCTTTTCTCATTGATTACTTTTAGGGGTGAAAACAAAATCCCACATTGGTTAAGGAATGAAGTGATAAATCTAGGATTGGTTGGAAAAAGAAAGTGATCAAGAAATCACACATATCTCATCAGGTTTAAGATTTTTTTTGCAAAATCACGAGGGTTTATACCCGAAATGGACACACGTTGTCTACAAATAAACGCTTTCGTGGTATTAATTATGAAAGAAAAAGTAGTTTTTAACCCATCGAGCTAGATTCAAAATAAGCTGTTTTTGTAGACAACGTGTGTCCAGCTCGTCCAACTAGGGGGGCGCCATTGTGGCAATAATGTGAGAAGAGATTTGATGATTATAATTTGTCTTCAATTCAGGTTGATACAAGCGAGGAAAGGGACGTGACAGGAGCAAAAGCGGAAGAGCTGATAGCAGAGATGGTCAAAGATGGAAAGGTGAGAAGTACAGTGGAGGTGGCTTATGATGCAACGAAAGGGACGGCGGAGAAGGTGAAGGACACCGTAATTGCAGAGGCAAACGAAAATGTAGTGGACACTACTGAGTACAGAAGCATGGAGAATATGGGTAACTATCAAAAACATCTTACTTTTTTATATATATCTTTGATCCATCACAATTGGGTGATACGCACAAATATGATCAGTTAGCCTCGAATTTGCACAAGAAGCGATTCACATGCAGACTCTTTTCTATCATATTAATACTAGAATTAAATAATTTCTTTATCATGATTAATTTCAAATTAAAAATATTCTTCATTTTAACTATAATTCAATTCAATTCAAACTAACTATTTATTTTTCTTAACTTGAATATGAGCTGCTGTTGAATTTTTATTTTTCTATTTAACTTGACTTAAAACTCAAATTTATATTTTTTTAAAAAAAATTAATATGAGAAATAGTTAATTAAATATGCACGAAGATTTCAAGTGTATACATATCATTTGGAAAAACAAAAATTTGTAGCCAAAATAAACTTCACTTACTGATATCGGTACATGTAAGGCTCAATCGCCATCCCGTTGTACTAATAATAATGTATAATTTTGTATTTAGGTAAAGATATAATCGTGCAAGTCTATATTGTTGACTACTGCTACACAGCTATAGAAGCACAATTGTTAGTGTGGAATGAATCTGATACCTAATGCAAATAGATCAAGAAAATTTGAAAGAGACAAACCCATCATCTGAAATTTTAAGTAAATACTCAAATACATGTTTCTTCCAATTGGAAGTGCTTTTGATAATTTCATTTTCCCTTTTGGAAAGAAAAAATAGATGTTATTATTTATAGCTTTTGATGATCTGATTGATGAAGAAGCTTAAGGTCGTATATTTTCTTGCAGATGATCAGAAGCAATAGTTCTATGGCTTTTTAGCTTCCAACTGTTTGGCAAATATGAAAAAAGGGGATGAAGTTTCTCCATCGTCTTCTTAAATTAAAACCTCTCAATGTTAAGGGGTAATATGAATTTGGTTTGCCTATAATTTTATTGATTATATATAATAATAATTTTTTTTGGTTGTGGATGGGATACAATTTTGAGGATGATCCTATTGCTTCTTATAATATATACATATATATATGGGTTATTGTGTTTGTGAGTCTACCAACGTGATAAAAAAAAACTTGTACAAGTG

mRNA sequence

CCCACTTGTTGATCCTACAACTCTCCACGTTTCATCATTAACATAATAATTGTTAATAAAAACGCACTCTTAAGAGGTAAAAATGGAAAAAATAAAAAGGAGAAGAAGAAGATCCACCGATTGAAGTTTACCGTAAATTGGAAAAATGGCTTACTCCAATCGATCTGTTGTTGCTTTCCGTTTTTCAAAAGCTTTGTTTGAACAATGCCATGGCGCTGCCGCTGCCGCTGCTGCTGTTCCTCCCTTCTCCCCCGCTCCCGCCGTTTCTATTTCTTATAAGGTTGATACAAGCGAGGAAAGGGACGTGACAGGAGCAAAAGCGGAAGAGCTGATAGCAGAGATGGTCAAAGATGGAAAGGTGAGAAGTACAGTGGAGGTGGCTTATGATGCAACGAAAGGGACGGCGGAGAAGGTGAAGGACACCGTAATTGCAGAGGCAAACGAAAATGTAGTGGACACTACTGAGTACAGAAGCATGGAGAATATGGATGATCAGAAGCAATAGTTCTATGGCTTTTTAGCTTCCAACTGTTTGGCAAATATGAAAAAAGGGGATGAAGTTTCTCCATCGTCTTCTTAAATTAAAACCTCTCAATGTTAAGGGGTAATATGAATTTGGTTTGCCTATAATTTTATTGATTATATATAATAATAATTTTTTTTGGTTGTGGATGGGATACAATTTTGAGGATGATCCTATTGCTTCTTATAATATATACATATATATATGGGTTATTGTGTTTGTGAGTCTACCAACGTGATAAAAAAAAACTTGTACAAGTG

Coding sequence (CDS)

ATGGCTTACTCCAATCGATCTGTTGTTGCTTTCCGTTTTTCAAAAGCTTTGTTTGAACAATGCCATGGCGCTGCCGCTGCCGCTGCTGCTGTTCCTCCCTTCTCCCCCGCTCCCGCCGTTTCTATTTCTTATAAGGTTGATACAAGCGAGGAAAGGGACGTGACAGGAGCAAAAGCGGAAGAGCTGATAGCAGAGATGGTCAAAGATGGAAAGGTGAGAAGTACAGTGGAGGTGGCTTATGATGCAACGAAAGGGACGGCGGAGAAGGTGAAGGACACCGTAATTGCAGAGGCAAACGAAAATGTAGTGGACACTACTGAGTACAGAAGCATGGAGAATATGGATGATCAGAAGCAATAG

Protein sequence

MAYSNRSVVAFRFSKALFEQCHGAAAAAAAVPPFSPAPAVSISYKVDTSEERDVTGAKAEELIAEMVKDGKVRSTVEVAYDATKGTAEKVKDTVIAEANENVVDTTEYRSMENMDDQKQ
Homology
[Close]
BLAST of CsGy4G021730 vs. NCBI nr
Match: XP_004146059.1 (PREDICTED: uncharacterized protein LOC101215612 [Cucumis sativus] >KGN55118.1 hypothetical protein Csa_4G631600 [Cucumis sativus])

HSP 1 Score: 219.5 bits (558), Expect = 5.9e-54
Identity = 119/119 (100.00%), Postives = 119/119 (100.00%), Query Frame = 0 

Query: 1   MAYSNRSVVAFRFSKALFEQCHGAAAAAAAVPPFSPAPAVSISYKVDTSEERDVTGAKAE 60
           MAYSNRSVVAFRFSKALFEQCHGAAAAAAAVPPFSPAPAVSISYKVDTSEERDVTGAKAE
Sbjct: 1   MAYSNRSVVAFRFSKALFEQCHGAAAAAAAVPPFSPAPAVSISYKVDTSEERDVTGAKAE 60

Query: 61  ELIAEMVKDGKVRSTVEVAYDATKGTAEKVKDTVIAEANENVVDTTEYRSMENMDDQKQ 120
           ELIAEMVKDGKVRSTVEVAYDATKGTAEKVKDTVIAEANENVVDTTEYRSMENMDDQKQ
Sbjct: 61  ELIAEMVKDGKVRSTVEVAYDATKGTAEKVKDTVIAEANENVVDTTEYRSMENMDDQKQ 119

[Close]
BLAST of CsGy4G021730 vs. NCBI nr
Match: XP_020418791.1 (uncharacterized protein LOC109949012 [Prunus persica])

HSP 1 Score: 57.0 bits (136), Expect = 5.1e-05
Identity = 31/57 (54.39%), Postives = 44/57 (77.19%), Query Frame = 0 

Query: 57  AKAEELIAEMVKDGKVRSTVEVAYDATKGTAEKVKDTVIAEANENVVDTTEYRSMEN 114
           AKAEE+  ++V   K R+  + A+D+TK   +KV DT++AEANENV+DTTEYR+ME+
Sbjct: 88  AKAEEVAEDLVDMAKERT--DFAWDSTKNKTQKVGDTLVAEANENVIDTTEYRNMED 142

[Close]
BLAST of CsGy4G021730 vs. TrEMBL
Match: tr|A0A0A0L055|A0A0A0L055_CUCSA (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_4G631600 PE=4 SV=1)

HSP 1 Score: 219.5 bits (558), Expect = 3.9e-54
Identity = 119/119 (100.00%), Postives = 119/119 (100.00%), Query Frame = 0 

Query: 1   MAYSNRSVVAFRFSKALFEQCHGAAAAAAAVPPFSPAPAVSISYKVDTSEERDVTGAKAE 60
           MAYSNRSVVAFRFSKALFEQCHGAAAAAAAVPPFSPAPAVSISYKVDTSEERDVTGAKAE
Sbjct: 1   MAYSNRSVVAFRFSKALFEQCHGAAAAAAAVPPFSPAPAVSISYKVDTSEERDVTGAKAE 60

Query: 61  ELIAEMVKDGKVRSTVEVAYDATKGTAEKVKDTVIAEANENVVDTTEYRSMENMDDQKQ 120
           ELIAEMVKDGKVRSTVEVAYDATKGTAEKVKDTVIAEANENVVDTTEYRSMENMDDQKQ
Sbjct: 61  ELIAEMVKDGKVRSTVEVAYDATKGTAEKVKDTVIAEANENVVDTTEYRSMENMDDQKQ 119

The following BLAST results are available for this feature:
BLAST of CsGy4G021730 vs. NCBI nr
Match NameE-valueIdentityDescription
XP_004146059.15.9e-54100.00PREDICTED: uncharacterized protein LOC101215612 [Cucumis sativus] >KGN55118.1 hy... [more]
XP_020418791.15.1e-0554.39uncharacterized protein LOC109949012 [Prunus persica][more]
BLAST of CsGy4G021730 vs. TAIR10
Match NameE-valueIdentityDescription
BLAST of CsGy4G021730 vs. Swiss-Prot
Match NameE-valueIdentityDescription
BLAST of CsGy4G021730 vs. TrEMBL
Match NameE-valueIdentityDescription
tr|A0A0A0L055|A0A0A0L055_CUCSA3.9e-54100.00Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_4G631600 PE=4 SV=1[more]
GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
Category Term Accession Term Name
biological_process GO:0008150 biological_process
cellular_component GO:0005575 cellular_component
molecular_function GO:0003674 molecular_function
Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
CsGy4G021730.1CsGy4G021730.1mRNA


Synteny
The following gene(s) are orthologous to this gene:
GeneOrthologueOrganismBlock
CsGy4G021730Csa4G631600Cucumber (Chinese Long) v2cgybcuB166
CsGy4G021730CSPI04G23370Wild cucumber (PI 183967)cgybcpiB169
CsGy4G021730Lsi04G020630Bottle gourd (USVL1VR-Ls)cgyblsiB263
CsGy4G021730CsaV3_4G033590Cucumber (Chinese Long) v3cgybcucB171
The following gene(s) are paralogous to this gene:

None

The following block(s) are covering this gene:
GeneOrganismBlock
CsGy4G021730Cucumber (Gy14) v2cgybcgybB025
CsGy4G021730Cucumber (Gy14) v2cgybcgybB137
CsGy4G021730Cucurbita maxima (Rimu)cgybcmaB466
CsGy4G021730Cucurbita maxima (Rimu)cgybcmaB482
CsGy4G021730Cucurbita maxima (Rimu)cgybcmaB500
CsGy4G021730Cucurbita maxima (Rimu)cgybcmaB515
CsGy4G021730Cucurbita moschata (Rifu)cgybcmoB434
CsGy4G021730Cucurbita moschata (Rifu)cgybcmoB452
CsGy4G021730Cucurbita moschata (Rifu)cgybcmoB484
CsGy4G021730Cucurbita moschata (Rifu)cgybcmoB470
CsGy4G021730Cucurbita pepo (Zucchini)cgybcpeB490
CsGy4G021730Cucurbita pepo (Zucchini)cgybcpeB540
CsGy4G021730Cucurbita pepo (Zucchini)cgybcpeB537
CsGy4G021730Cucurbita pepo (Zucchini)cgybcpeB563
CsGy4G021730Cucumber (Chinese Long) v2cgybcuB158
CsGy4G021730Cucumber (Chinese Long) v2cgybcuB190
CsGy4G021730Bottle gourd (USVL1VR-Ls)cgyblsiB252
CsGy4G021730Watermelon (Charleston Gray)cgybwcgB259
CsGy4G021730Watermelon (Charleston Gray)cgybwcgB270
CsGy4G021730Watermelon (97103) v1cgybwmB307
CsGy4G021730Watermelon (97103) v1cgybwmB326
CsGy4G021730Wild cucumber (PI 183967)cgybcpiB161
CsGy4G021730Wild cucumber (PI 183967)cgybcpiB193
CsGy4G021730Wild cucumber (PI 183967)cgybcpiB196
CsGy4G021730Silver-seed gourdcarcgybB0182
CsGy4G021730Silver-seed gourdcarcgybB0323
CsGy4G021730Silver-seed gourdcarcgybB0653
CsGy4G021730Cucumber (Chinese Long) v3cgybcucB194
CsGy4G021730Watermelon (97103) v2cgybwmbB258
CsGy4G021730Watermelon (97103) v2cgybwmbB265
CsGy4G021730Wax gourdcgybwgoB385
CsGy4G021730Wax gourdcgybwgoB398