CsGy4G020750 (gene) Cucumber (Gy14) v2

Overview
NameCsGy4G020750
Typegene
OrganismCucumis sativus (Cucumber (Gy14) v2)
DescriptionUncharacterized protein
LocationChr4 : 27520459 .. 27520761 (+)
Genome Viewer
Gene Expression
   



Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
ATGTTGTTCAAACTCTCTCACCACATTGAGTTGCTTCTGTTTAGTTCCCTTCACCTTTCGTTCGAAGATGTTGTGGCAAAGAAGATAGAGAGAAGATCACATAGAAGACGAGATCACGTGAAGAATGAAGTTGCTTATGTTTGTGGCCGACAATCACAGTTAGTTAGTTTCTTGACTCAACGTCCAAGCCATTCGTTTGTCACATGAAAGGAGAAAATAGTGGAGAGGGCAAGAATGAGGGCAAGAATGGGAAGCATGGAATTGGAGGGAAAGAGTGAGAAGCATGAAATTATGATTTTTTAA

mRNA sequence

ATGTTGTTCAAACTCTCTCACCACATTGAGTTGCTTCTGTTTAGTTCCCTTCACCTTTCGTTCGAAGATGTTGTGGCAAAGAAGATAGAGAGAAGATCACATAGAAGACGAGATCACGTGAAGAATGAAGTTGCTTATGTTTGTGGCCGACAATCACAGTTAGAGAAAATAGTGGAGAGGGCAAGAATGAGGGCAAGAATGGGAAGCATGGAATTGGAGGGAAAGAGTGAGAAGCATGAAATTATGATTTTTTAA

Coding sequence (CDS)

ATGTTGTTCAAACTCTCTCACCACATTGAGTTGCTTCTGTTTAGTTCCCTTCACCTTTCGTTCGAAGATGTTGTGGCAAAGAAGATAGAGAGAAGATCACATAGAAGACGAGATCACGTGAAGAATGAAGTTGCTTATGTTTGTGGCCGACAATCACAGTTAGAGAAAATAGTGGAGAGGGCAAGAATGAGGGCAAGAATGGGAAGCATGGAATTGGAGGGAAAGAGTGAGAAGCATGAAATTATGATTTTTTAA

Protein sequence

MLFKLSHHIELLLFSSLHLSFEDVVAKKIERRSHRRRDHVKNEVAYVCGRQSQLEKIVERARMRARMGSMELEGKSEKHEIMIF
Homology
[Close]
BLAST of CsGy4G020750 vs. NCBI nr
Match: KGN55003.1 (hypothetical protein Csa_4G620660 [Cucumis sativus])

HSP 1 Score: 157.5 bits (397), Expect = 1.9e-35
Identity = 82/84 (97.62%), Postives = 82/84 (97.62%), Query Frame = 0 

Query: 1  MLFKLSHHIELLLFSSLHLSFEDVVAKKIERRSHRRRDHVKNEVAYVCGRQSQLEKIVER 60
          MLFKLSHHIELLLF SLHLSFEDVVAKKIERRSHRRRDHVKNEVAYVCGRQSQLEKIVER
Sbjct: 1  MLFKLSHHIELLLFDSLHLSFEDVVAKKIERRSHRRRDHVKNEVAYVCGRQSQLEKIVER 60

Query: 61 ARMRARMGSMELEGKSEKHEIMIF 85
           RMRARMGSMELEGKSEKHEIMIF
Sbjct: 61 GRMRARMGSMELEGKSEKHEIMIF 84

[Close]
BLAST of CsGy4G020750 vs. TrEMBL
Match: tr|A0A0A0KZY6|A0A0A0KZY6_CUCSA (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_4G620660 PE=4 SV=1)

HSP 1 Score: 157.5 bits (397), Expect = 1.3e-35
Identity = 82/84 (97.62%), Postives = 82/84 (97.62%), Query Frame = 0 

Query: 1  MLFKLSHHIELLLFSSLHLSFEDVVAKKIERRSHRRRDHVKNEVAYVCGRQSQLEKIVER 60
          MLFKLSHHIELLLF SLHLSFEDVVAKKIERRSHRRRDHVKNEVAYVCGRQSQLEKIVER
Sbjct: 1  MLFKLSHHIELLLFDSLHLSFEDVVAKKIERRSHRRRDHVKNEVAYVCGRQSQLEKIVER 60

Query: 61 ARMRARMGSMELEGKSEKHEIMIF 85
           RMRARMGSMELEGKSEKHEIMIF
Sbjct: 61 GRMRARMGSMELEGKSEKHEIMIF 84

The following BLAST results are available for this feature:
BLAST of CsGy4G020750 vs. NCBI nr
Match NameE-valueIdentityDescription
KGN55003.11.9e-3597.62hypothetical protein Csa_4G620660 [Cucumis sativus][more]
BLAST of CsGy4G020750 vs. TAIR10
Match NameE-valueIdentityDescription
BLAST of CsGy4G020750 vs. Swiss-Prot
Match NameE-valueIdentityDescription
BLAST of CsGy4G020750 vs. TrEMBL
Match NameE-valueIdentityDescription
tr|A0A0A0KZY6|A0A0A0KZY6_CUCSA1.3e-3597.62Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_4G620660 PE=4 SV=1[more]
GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
Category Term Accession Term Name
biological_process GO:0008150 biological_process
cellular_component GO:0005575 cellular_component
molecular_function GO:0003674 molecular_function
Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
CsGy4G020750.1CsGy4G020750.1mRNA


Synteny
The following gene(s) are orthologous to this gene:
GeneOrthologueOrganismBlock
CsGy4G020750Csa4G620660Cucumber (Chinese Long) v2cgybcuB166
CsGy4G020750CsaV3_4G032590Cucumber (Chinese Long) v3cgybcucB171
The following gene(s) are paralogous to this gene:

None

The following block(s) are covering this gene:
GeneOrganismBlock
CsGy4G020750Watermelon (97103) v2cgybwmbB265
CsGy4G020750Wax gourdcgybwgoB398
CsGy4G020750Cucurbita maxima (Rimu)cgybcmaB470
CsGy4G020750Cucurbita maxima (Rimu)cgybcmaB515
CsGy4G020750Cucurbita moschata (Rifu)cgybcmoB437
CsGy4G020750Cucurbita moschata (Rifu)cgybcmoB484
CsGy4G020750Cucurbita pepo (Zucchini)cgybcpeB540
CsGy4G020750Cucurbita pepo (Zucchini)cgybcpeB566
CsGy4G020750Bottle gourd (USVL1VR-Ls)cgyblsiB263
CsGy4G020750Melon (DHL92) v3.5.1cgybmeB275
CsGy4G020750Melon (DHL92) v3.6.1cgybmedB273
CsGy4G020750Watermelon (Charleston Gray)cgybwcgB259
CsGy4G020750Watermelon (97103) v1cgybwmB326
CsGy4G020750Wild cucumber (PI 183967)cgybcpiB169
CsGy4G020750Silver-seed gourdcarcgybB0323
CsGy4G020750Silver-seed gourdcarcgybB0634