CsGy4G016120 (gene) Cucumber (Gy14) v2

Overview
NameCsGy4G016120
Typegene
OrganismCucumis sativus (Cucumber (Gy14) v2)
DescriptionNADH dehydrogenase [ubiquinone] 1 alpha subcomplex subunit 1
LocationChr4 : 20841529 .. 20847330 (+)
Genome Viewer
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: five_prime_UTRexonCDSthree_prime_UTR
Hold the cursor over a type above to highlight its positions in the sequence below.
AGAGATTTTCAACGGCAGAGAGAAAAATGGCAGGATGGAGATGGCTGGAAGCGGCACTTCCTCTCGGAATTATCGCCGGAATGCTTTGTGTAATGGGTAATGCTCAATATTACATTCACAAAGCCGCCCATGGCCGGGTAATTTCCTTTCTATTGCTTTCGATTTCAGCGTTTTCCCCTCTTCTTTGCTCAGTGGATCTTCTTTCTCAAAGTTCCGATCAACGATCTCTGTAATTAGTTTCTGGATTTTATTTATGTGGTTTTTGTTTTTGTAGCCTAAGCACATCGGTAATGATATGTGGGATGTTGCCATGGAACGCCGGGACAAGAAACTTGTTGAGAATTTATCCGCCGCTTCTCATAGTTGATTTTATTTTCGACCTGCATCCCGGTACATGTTTATGCGACTTTATTACTATTTTTCCTGTTTTTAAGAATGTTCATCTTAGGGATATGAAACTATTAGGACGATCATCATTCTATCTCTTGGGCTTGGAGAATGTTGAATTTTAACTGTAGTATGATTTTTTATGCAAGGCATATATAGATTTACAGTGACATTTTTTCTTTAATTAGTTGTAGACAATTGGTAGGCACTTCTTGTATAGTTTTGTTGGGAGGGGGGGTTCCCTCTACCCCTGCCCTTAGGCTATGCTTTTGTTTTTCTTTTGCAATATACTCCCCAATTTCTTATTAAAAAAAGAGTGTACATTCATGTTTATAAGAATTGAAACTCCATCGATAAATCCAATATACAAAAGGGTAATTAGATAATCTCACTAACATATAAGCCTACGGAGTTGTGGAAACACATTCTCCCAAACTGGTGAGGAGATTACTAGTGATAAAACAGGAAAAGGCACCGCAAGAGCTAGTTCAGATGGTCCTTAAATTCCCAAGCTACCAAAAATTGTTTATCTGTTCCTTCAAAGGCCCTTCTTTTCGTTGCAGAAATTTAGCGCTGGTTTATGTGTTCATTTTGTTGCTATGCTATTTGAGTCAATCGTTGATAATCTGCTGTGAGTTGGTAGGGTAATTAACTATAGTCTATAGTAAAGTAACTTTTAAGCCCCTACATTTGCGATGATGTTTAGTCTAACCCCGTTGCCAAAAACTGGGCTTTAAGTTTACACTTAGTGTCAATTGTTAAAATGACAGCTTCAGGTGATTTATTAACCAACCATGCAACTCTTGGTTCAGTTGGTTCCGTTTTGGCTAAAAGTAAAACGAAAATGAGATGGAACTCTTCAGACTGAAAATGGCGGAGGCAATGGTGGCTTGAGTGTATGAAGTTAAGGTCAAAGGGCTAATGCATGAGAGAATTGTAACTAAGAAAGGAGGACTTGAGAGGGGGGGGGGGGGGGGCGAATTAATAGGGAGGGAGATTGGAGGCATGGAACATGGCATGAGTGAGCTAGTGCTGGTTGAGATTTGGGAAGTGAGAGGGAGGAAAAAAACTAATATTTTGGCTAAAAAAATCTCAGTGGTTCATGAATCATGTCTATCTCTCCTTCATAGTGTATTATGTGTCAGAACCATGCTGAATCCACTGACCATCTATTTGTGCACTGTTTTTTTGCTTCCCATTTGAATGCTCAATGATATTTTTTATGTCCTTGCATATCTTTTGGTGGTCGTTCATTTATGAGCACAAAGAAGACAGTTTGGTTGGCTATTTTTTCAAGTTTTCTTGTGACACTTTGGGGTGATGTAACAAGTCTCTATTTAGAGGCTCTTTCTCTTCTTTTGATTCCTTTCTTGATTTGGTTCTGTCTACACCTTCTTACTGGTGCAAACTGGGCATCTTTTTAAGAATCATAGTCTTTCTTTTTTAGTATCCAATTGGAAATCACTTTTGTAATCACCTTTAGGTGCATGGGTTTCTCCATATTTCATTTATTTATTCAATGTATTGTTTCTTATCTAAATAAATAAATCATGGTATTGGGCAAAAATACTTGATTTCATTTTCATTTGCCACTACTTCGTGGGGACATCTTTTTTATTTTCTTGATGAAATTGATGCCTTTCATTGAGAAAAAAAATGAAGGAATACAAGGGTATACAAAAAAAAAAAAAAAAAACCAGCCCAACAGAACACCCCCATTAAAAGAACGGGGACTAACTAAGTAAAATGTTTCCTATGGAATAATTGCAAAAGCTCTTTGAAATTGAAGCCCAAAGGGACACCTGAAATCTGAGGAAAGACCAAATTTCACTATGCACCCTCTCCCTACCCCAAAAACACCTGTTCGTTTCTCACCCCAAATGTCCAGATAACCGCACCCTGACAAGTCATAAAAAGCCCAGTTTATCTTTGAAGGACTGATAGAGGAGGAACTCTTCGATTGTTGCTCTCACACTCCACATTACCAGCAAAGCTAATACTGAACAATGGAGGAAAGAGCTCCACACAGCTCGAGTATACTGGCAATCCCAAAAATAATGATCAAGATCTTCCTCTGCCTTTTGAAAAAGCATGCAACAAAATGAAAAAGCATGCAACAAAAAGGCCCAAGAAGCGAAGTTCTCCTCCTAACAAGCTTGTTGATGGTATTAACCCGACCAAGCAAGACTTGCCAAATGAAGAACCTAACTTTCTTAGGAACTTTAATCCTCCATACCACATAAAAAACAGACTCCTTAGGGGAATCCAACAACAAACTAAACAAGGATTTATAAGTATAACCCCGATTAGGATTAGGGTTCCAAACACGAGCATCGCTTCTCCCCTCCCTAGAAAAGCAACCCTCAAGCAAGGAAAGAAGAGAGGCTACCTCTATCATTTCCCTACTAGTCAAATTACAGCGGAACCCAAAATATAAAGACACAAGATTCTCAGAACCAACCAAAAGATCTGTAATCGCACAATTTTTGGAAGTGGATAAATGATAAAGATGTGTAAATAAAGAACAAAGGGAATTCTCCCCCACCTGTTGATCCTCCTAGAAGTAATTGTCCTTACCATTCCCCACAAAACAACGTGTAAGATAGTAGTGAGCTCGAAAGAGATATCCTTCCAAGGATTTCAGAATGTGCCTTTAACCCCTTTCGTCGTCCACTCAAAGGGAAGGGAGCTATGATTGCTCACAACAATTCTATGCCATAAAGAATCAGGTTAGAGAGAAAAGTGCCAAAGCCACTTTGCCAACAACGCTCTGTTGCAGATTTTAATATTAACAATCTTTTAACCTCCTGACTCATAGTTAGGCAATTGCATTGCCAGGAGACTCTAACTCTCTACTTGCCAGTGTTTTGATCATCCATCCTTTCAAAAAGTGAGAAGGGATTCTTGTAACTTATTTTTGTTAGAGCCTCTTTTTGTCCATTTGGAATGAACAAAATTTTTGCATCTTCAAGGATAAAGAATAGGATAATGATAGTTTGTAGATTTTTTTTATCATTTTTGGCTCTCTATTGGTGTAAAATATCAAATATCTTCCTACTTTCATAGCCATGGCCTCACTTCTCTTGTAGCGCTATGGAAGCAAATTGGTTTGTTCTGGTTTCATATTGTTTTTGTTTCTGTTTGTAATCCCTTTGGATGGGTTTATTTATTTTGCCTTTTTATGTAATTTTTTAATGAAAAATTGTTATAAAAAAACTAGTATAATACTTAAATAATAAAAAAGGCTTACTTAACATGACATACAAGTTAGAAAGACACTTTCTTGCCCCTCCATCTGAAGTGTGGTTCAAGTCATTGACTGATGTTGGTTTTAGTTGGTTATCTCAATCTGGATTCGCTCGTTCTCGCCTTAGGAGAACCACTTGTGTGTGATCTTTGTAGATACCTTATTTTGTCATTTTTTATTTTTTATTTATATTTATTTATTTTATTTTTAAAAAATAAAATTGGATTTGAATTTAACTTAAAGAAAACAAAAAACAAAAAAATTAAAAAAATAAAAACAAAAGAAAAAAAACCTAATCTCACGATTCCCCTCCCAATTTTCCTCAACTATTTCCTCCATATATCCCCATTTTCTCTCCCACAGTTTTTTTTCTTTCCCACTTCACTTCTCCCACTCTAAAAAAACCAACTAACTGATTACCCTATAAAAGGATCCCAAGAGGACTTAAGGAGATACATTGAGATTTGCTTTTAGGGTGAAAGGGAGGTTGAGATTTTCTTAGGAAACTTTTCTCCCAAACTAAAGTCTTCAAAGGTTTTTTTTTTTTTTTTTTTTCCTGAATTTCTTTTCTTTTCCCACTTGAATGTTGCTTCTCACTGATTTCAACTAATTTGGTGATTAGAATTAGGGTTTGCTGTGGCTTCAAATTTATTATTACAGGTTTATTTTAGTTGAATTTTGTTGATTTTAGTTTGAATTTGGATTTTATTAAATTTGTTGTTTATTAATTAAGGCAGAGTTATTTGATATTAATTGGTCATCATTTCTAATACTTCATATATTTTGTTTTGCTATTATTATTATTATTATTTACGAAGTAATGTTTCTTCATGGGTCTTATGATTTAAATTCCACAAGTACATGAAATTTCTCTATTTGAAAATTAATTAATAAATTGTCTTTTAAACAATATATAACATATGTTTTTTTCTATGGAATTTATTAATTCTTTAGATATATGGAATTTCCTAAACATCTATTACGGAGATCAAAATATCAAAGTTTAATATTTTAATATTCTTGAGGAATGAAAAACCATCCTTTGAAACAATAAATAAACTTAATGACTCTTATGCCACCCATAATTATCAATTCATGCTTTTTCTTAGATGTCAATTGAGAACAATGGGACATTTTTAAAAAATCAAATAAAAAACTTTGTTTTGTAAACCTTTGTAATTTAGTTTAAAAGATAAAATTTGGTAGGTTTTTTTTATATATTTTTGGGTGACCAATCAGTTAGTGGAGATTTCGAACCTATTTATGACGTTGGCATCGTGCTGTGATAATTTTAATCTTAATGCTCGAAGTTTATGTAGAATTCTAAATCTGTAACAGTTCCAGTGCCCTTTTATTACTTAAATTCTTAAAAGTTTTCAGATAAATTCCATTGATATCTAAAGCCTAATCTTGTCTCTTCTAAACGTGAACAGTTTTAGCCATTACTTGACTTGTATTCTTTCTTTGAGATTTTTTCGTTGGAATATTTCTTCATCTTTTTAGTGTGAATTTCCTGGTGCTACTACTATGGATGGATTTCCTTCCGAAATAAGTATTTCCTTTCATAAATCGAGGAAGCTTACCTAAACAAATCCAAAACCCTTTCCTACATAGAACCTTGACGCTAAAATGTGTCGTTTGAAATTTTTACATTTCGAAAGTCCTTGCTCGCATGCATATTTGCACTTGTAGGTTTTGTGCAAGATTTCAATTTGAGTTCATGGGTCTTTCCTACGAAGCTTGTGTAGCTATTAAGTGGACTCTCGGTCTTGCATAGAGCTTCCGCAAACCATGGAAGTCGCCTAAACAATGCCCCATTATCCTGCTACATAGAGCCTTGACACTCAAAATATACTTTTGAAATTTGCACATTTTAAAACTCATCGCTCACATGCAAACTTAGGTTTTTGTCCATAATTTAATCTGTATTCTTGGGTTTCTTCCCTACCGTCTTTTCACTTATTAAATGGACTCTCAGCTTTCCTTCTGAGGCATTTGGTCATTTTCCTTATCTTTTAATTACTCACTATACTTTAGGAGACACTTGAATTTAGAACTAACACTAATGTTGTCCTAGGTACAGGAGCTGTGGATGCACTCTTGATGAAGGAATAAAAGCTTTTGTTGCAGAATGCAGATATCTATGCAATGATGATCACTGCCATGAA

mRNA sequence

AGAGATTTTCAACGGCAGAGAGAAAAATGGCAGGATGGAGATGGCTGGAAGCGGCACTTCCTCTCGGAATTATCGCCGGAATGCTTTGTGTAATGGGTAATGCTCAATATTACATTCACAAAGCCGCCCATGGCCGGCCTAAGCACATCGGTAATGATATGTGGGATGTTGCCATGGAACGCCGGGACAAGAAACTTGTTGAGAATTTATCCGCCGCTTCTCATAGTTGATTTTATTTTCGACCTGCATCCCGGTACAGGAGCTGTGGATGCACTCTTGATGAAGGAATAAAAGCTTTTGTTGCAGAATGCAGATATCTATGCAATGATGATCACTGCCATGAA

Coding sequence (CDS)

ATGGCAGGATGGAGATGGCTGGAAGCGGCACTTCCTCTCGGAATTATCGCCGGAATGCTTTGTGTAATGGGTAATGCTCAATATTACATTCACAAAGCCGCCCATGGCCGGCCTAAGCACATCGGTAATGATATGTGGGATGTTGCCATGGAACGCCGGGACAAGAAACTTGTTGAGAATTTATCCGCCGCTTCTCATAGTTGA

Protein sequence

MAGWRWLEAALPLGIIAGMLCVMGNAQYYIHKAAHGRPKHIGNDMWDVAMERRDKKLVENLSAASHS
Homology
[Close]
BLAST of CsGy4G016120 vs. NCBI nr
Match: XP_004142669.1 (PREDICTED: NADH dehydrogenase [ubiquinone] 1 alpha subcomplex subunit 1 [Cucumis sativus] >XP_011653734.1 PREDICTED: NADH dehydrogenase [ubiquinone] 1 alpha subcomplex subunit 1 [Cucumis sativus] >KGN54471.1 hypothetical protein Csa_4G337280 [Cucumis sativus])

HSP 1 Score: 144.4 bits (363), Expect = 1.4e-31
Identity = 67/67 (100.00%), Postives = 67/67 (100.00%), Query Frame = 0 

Query: 1  MAGWRWLEAALPLGIIAGMLCVMGNAQYYIHKAAHGRPKHIGNDMWDVAMERRDKKLVEN 60
          MAGWRWLEAALPLGIIAGMLCVMGNAQYYIHKAAHGRPKHIGNDMWDVAMERRDKKLVEN
Sbjct: 1  MAGWRWLEAALPLGIIAGMLCVMGNAQYYIHKAAHGRPKHIGNDMWDVAMERRDKKLVEN 60

Query: 61 LSAASHS 68
          LSAASHS
Sbjct: 61 LSAASHS 67

[Close]
BLAST of CsGy4G016120 vs. NCBI nr
Match: XP_008463294.1 (PREDICTED: NADH dehydrogenase [ubiquinone] 1 alpha subcomplex subunit 1 [Cucumis melo] >XP_008463295.1 PREDICTED: NADH dehydrogenase [ubiquinone] 1 alpha subcomplex subunit 1 [Cucumis melo] >XP_008463296.1 PREDICTED: NADH dehydrogenase [ubiquinone] 1 alpha subcomplex subunit 1 [Cucumis melo])

HSP 1 Score: 142.9 bits (359), Expect = 4.0e-31
Identity = 66/67 (98.51%), Postives = 66/67 (98.51%), Query Frame = 0 

Query: 1  MAGWRWLEAALPLGIIAGMLCVMGNAQYYIHKAAHGRPKHIGNDMWDVAMERRDKKLVEN 60
          MAGWRWLEAALPLGIIAGMLCVMGNAQYYIHKAAHGRPKHIGNDMWDVAMERRDKKLVEN
Sbjct: 1  MAGWRWLEAALPLGIIAGMLCVMGNAQYYIHKAAHGRPKHIGNDMWDVAMERRDKKLVEN 60

Query: 61 LSAASHS 68
          LSA SHS
Sbjct: 61 LSATSHS 67

[Close]
BLAST of CsGy4G016120 vs. NCBI nr
Match: XP_022950918.1 (NADH dehydrogenase [ubiquinone] 1 alpha subcomplex subunit 1 [Cucurbita moschata] >XP_022950920.1 NADH dehydrogenase [ubiquinone] 1 alpha subcomplex subunit 1 [Cucurbita moschata] >XP_023543068.1 NADH dehydrogenase [ubiquinone] 1 alpha subcomplex subunit 1 [Cucurbita pepo subsp. pepo] >XP_023543069.1 NADH dehydrogenase [ubiquinone] 1 alpha subcomplex subunit 1 [Cucurbita pepo subsp. pepo])

HSP 1 Score: 136.3 bits (342), Expect = 3.7e-29
Identity = 61/65 (93.85%), Postives = 64/65 (98.46%), Query Frame = 0 

Query: 3  GWRWLEAALPLGIIAGMLCVMGNAQYYIHKAAHGRPKHIGNDMWDVAMERRDKKLVENLS 62
          GWRWLEAALPLGIIAGMLC+MGNAQY+IHKAAHGRPKHIGNDMWDVAMERRDKKLVEN+S
Sbjct: 2  GWRWLEAALPLGIIAGMLCIMGNAQYHIHKAAHGRPKHIGNDMWDVAMERRDKKLVENVS 61

Query: 63 AASHS 68
          A SHS
Sbjct: 62 AGSHS 66

[Close]
BLAST of CsGy4G016120 vs. NCBI nr
Match: XP_022966508.1 (NADH dehydrogenase [ubiquinone] 1 alpha subcomplex subunit 1 [Cucurbita maxima] >XP_022966509.1 NADH dehydrogenase [ubiquinone] 1 alpha subcomplex subunit 1 [Cucurbita maxima])

HSP 1 Score: 132.9 bits (333), Expect = 4.1e-28
Identity = 59/63 (93.65%), Postives = 62/63 (98.41%), Query Frame = 0 

Query: 4  WRWLEAALPLGIIAGMLCVMGNAQYYIHKAAHGRPKHIGNDMWDVAMERRDKKLVENLSA 63
          WRW+EAALPLGIIAGMLC+MGNAQY+IHKAAHGRPKHIGNDMWDVAMERRDKKLVEN SA
Sbjct: 3  WRWMEAALPLGIIAGMLCIMGNAQYHIHKAAHGRPKHIGNDMWDVAMERRDKKLVENFSA 62

Query: 64 ASH 67
          ASH
Sbjct: 63 ASH 65

[Close]
BLAST of CsGy4G016120 vs. NCBI nr
Match: XP_002531809.1 (NADH dehydrogenase [ubiquinone] 1 alpha subcomplex subunit 1 [Ricinus communis] >EEF30566.1 conserved hypothetical protein [Ricinus communis])

HSP 1 Score: 131.3 bits (329), Expect = 1.2e-27
Identity = 60/62 (96.77%), Postives = 61/62 (98.39%), Query Frame = 0 

Query: 4  WRWLEAALPLGIIAGMLCVMGNAQYYIHKAAHGRPKHIGNDMWDVAMERRDKKLVENLSA 63
          WRWLEAALPLGIIAGMLCVMGNAQYYIH+AAHGRPKHIGNDMWDVAMERRDKKLVENLSA
Sbjct: 3  WRWLEAALPLGIIAGMLCVMGNAQYYIHRAAHGRPKHIGNDMWDVAMERRDKKLVENLSA 62

Query: 64 AS 66
           S
Sbjct: 63 PS 64

[Close]
BLAST of CsGy4G016120 vs. TAIR10
Match: AT3G08610.1 (unknown protein)

HSP 1 Score: 107.5 bits (267), Expect = 3.3e-24
Identity = 48/60 (80.00%), Postives = 53/60 (88.33%), Query Frame = 0 

Query: 6  WLEAALPLGIIAGMLCVMGNAQYYIHKAAHGRPKHIGNDMWDVAMERRDKKLVENLSAAS 65
          WLEA LPLGII GMLC+MGN+QYYIHKA HGRPKHIG+D WDVAMERRDKK+VE  +A S
Sbjct: 5  WLEAMLPLGIIGGMLCIMGNSQYYIHKAYHGRPKHIGHDEWDVAMERRDKKVVEKAAAPS 64

[Close]
BLAST of CsGy4G016120 vs. Swiss-Prot
Match: sp|Q9C9Z5|NDUA1_ARATH (NADH dehydrogenase [ubiquinone] 1 alpha subcomplex subunit 1 OS=Arabidopsis thaliana OX=3702 GN=At3g08610 PE=3 SV=1)

HSP 1 Score: 107.5 bits (267), Expect = 6.0e-23
Identity = 48/60 (80.00%), Postives = 53/60 (88.33%), Query Frame = 0 

Query: 6  WLEAALPLGIIAGMLCVMGNAQYYIHKAAHGRPKHIGNDMWDVAMERRDKKLVENLSAAS 65
          WLEA LPLGII GMLC+MGN+QYYIHKA HGRPKHIG+D WDVAMERRDKK+VE  +A S
Sbjct: 5  WLEAMLPLGIIGGMLCIMGNSQYYIHKAYHGRPKHIGHDEWDVAMERRDKKVVEKAAAPS 64

[Close]
BLAST of CsGy4G016120 vs. TrEMBL
Match: tr|A0A0A0L2Y7|A0A0A0L2Y7_CUCSA (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_4G337280 PE=4 SV=1)

HSP 1 Score: 144.4 bits (363), Expect = 9.0e-32
Identity = 67/67 (100.00%), Postives = 67/67 (100.00%), Query Frame = 0 

Query: 1  MAGWRWLEAALPLGIIAGMLCVMGNAQYYIHKAAHGRPKHIGNDMWDVAMERRDKKLVEN 60
          MAGWRWLEAALPLGIIAGMLCVMGNAQYYIHKAAHGRPKHIGNDMWDVAMERRDKKLVEN
Sbjct: 1  MAGWRWLEAALPLGIIAGMLCVMGNAQYYIHKAAHGRPKHIGNDMWDVAMERRDKKLVEN 60

Query: 61 LSAASHS 68
          LSAASHS
Sbjct: 61 LSAASHS 67

[Close]
BLAST of CsGy4G016120 vs. TrEMBL
Match: tr|A0A1S3CIY2|A0A1S3CIY2_CUCME (NADH dehydrogenase [ubiquinone] 1 alpha subcomplex subunit 1 OS=Cucumis melo OX=3656 GN=LOC103501486 PE=4 SV=1)

HSP 1 Score: 142.9 bits (359), Expect = 2.6e-31
Identity = 66/67 (98.51%), Postives = 66/67 (98.51%), Query Frame = 0 

Query: 1  MAGWRWLEAALPLGIIAGMLCVMGNAQYYIHKAAHGRPKHIGNDMWDVAMERRDKKLVEN 60
          MAGWRWLEAALPLGIIAGMLCVMGNAQYYIHKAAHGRPKHIGNDMWDVAMERRDKKLVEN
Sbjct: 1  MAGWRWLEAALPLGIIAGMLCVMGNAQYYIHKAAHGRPKHIGNDMWDVAMERRDKKLVEN 60

Query: 61 LSAASHS 68
          LSA SHS
Sbjct: 61 LSATSHS 67

[Close]
BLAST of CsGy4G016120 vs. TrEMBL
Match: tr|B9T0P0|B9T0P0_RICCO (Uncharacterized protein OS=Ricinus communis OX=3988 GN=RCOM_0126310 PE=4 SV=1)

HSP 1 Score: 131.3 bits (329), Expect = 7.9e-28
Identity = 60/62 (96.77%), Postives = 61/62 (98.39%), Query Frame = 0 

Query: 4  WRWLEAALPLGIIAGMLCVMGNAQYYIHKAAHGRPKHIGNDMWDVAMERRDKKLVENLSA 63
          WRWLEAALPLGIIAGMLCVMGNAQYYIH+AAHGRPKHIGNDMWDVAMERRDKKLVENLSA
Sbjct: 3  WRWLEAALPLGIIAGMLCVMGNAQYYIHRAAHGRPKHIGNDMWDVAMERRDKKLVENLSA 62

Query: 64 AS 66
           S
Sbjct: 63 PS 64

[Close]
BLAST of CsGy4G016120 vs. TrEMBL
Match: tr|E9JFV8|E9JFV8_JATCU (Uncharacterized protein OS=Jatropha curcas OX=180498 PE=2 SV=1)

HSP 1 Score: 129.4 bits (324), Expect = 3.0e-27
Identity = 60/62 (96.77%), Postives = 60/62 (96.77%), Query Frame = 0 

Query: 4  WRWLEAALPLGIIAGMLCVMGNAQYYIHKAAHGRPKHIGNDMWDVAMERRDKKLVENLSA 63
          W WLEAALPLGIIAGMLCVMGNAQYYIHKAAHGRPKHIGNDMWDVAMERRDKKLVENLSA
Sbjct: 3  WIWLEAALPLGIIAGMLCVMGNAQYYIHKAAHGRPKHIGNDMWDVAMERRDKKLVENLSA 62

Query: 64 AS 66
           S
Sbjct: 63 PS 64

[Close]
BLAST of CsGy4G016120 vs. TrEMBL
Match: tr|A0A2C9VBL2|A0A2C9VBL2_MANES (Uncharacterized protein OS=Manihot esculenta OX=3983 GN=MANES_09G121600 PE=4 SV=1)

HSP 1 Score: 128.6 bits (322), Expect = 5.1e-27
Identity = 59/62 (95.16%), Postives = 60/62 (96.77%), Query Frame = 0 

Query: 4  WRWLEAALPLGIIAGMLCVMGNAQYYIHKAAHGRPKHIGNDMWDVAMERRDKKLVENLSA 63
          W WLEAALPLGIIAGMLCVMGNAQYYIH+AAHGRPKHIGNDMWDVAMERRDKKLVENLSA
Sbjct: 3  WLWLEAALPLGIIAGMLCVMGNAQYYIHRAAHGRPKHIGNDMWDVAMERRDKKLVENLSA 62

Query: 64 AS 66
           S
Sbjct: 63 PS 64

The following BLAST results are available for this feature:
BLAST of CsGy4G016120 vs. NCBI nr
Match NameE-valueIdentityDescription
XP_004142669.11.4e-31100.00PREDICTED: NADH dehydrogenase [ubiquinone] 1 alpha subcomplex subunit 1 [Cucumis... [more]
XP_008463294.14.0e-3198.51PREDICTED: NADH dehydrogenase [ubiquinone] 1 alpha subcomplex subunit 1 [Cucumis... [more]
XP_022950918.13.7e-2993.85NADH dehydrogenase [ubiquinone] 1 alpha subcomplex subunit 1 [Cucurbita moschata... [more]
XP_022966508.14.1e-2893.65NADH dehydrogenase [ubiquinone] 1 alpha subcomplex subunit 1 [Cucurbita maxima] ... [more]
XP_002531809.11.2e-2796.77NADH dehydrogenase [ubiquinone] 1 alpha subcomplex subunit 1 [Ricinus communis] ... [more]
BLAST of CsGy4G016120 vs. TAIR10
Match NameE-valueIdentityDescription
AT3G08610.13.3e-2480.00unknown protein[more]
BLAST of CsGy4G016120 vs. Swiss-Prot
Match NameE-valueIdentityDescription
sp|Q9C9Z5|NDUA1_ARATH6.0e-2380.00NADH dehydrogenase [ubiquinone] 1 alpha subcomplex subunit 1 OS=Arabidopsis thal... [more]
BLAST of CsGy4G016120 vs. TrEMBL
Match NameE-valueIdentityDescription
tr|A0A0A0L2Y7|A0A0A0L2Y7_CUCSA9.0e-32100.00Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_4G337280 PE=4 SV=1[more]
tr|A0A1S3CIY2|A0A1S3CIY2_CUCME2.6e-3198.51NADH dehydrogenase [ubiquinone] 1 alpha subcomplex subunit 1 OS=Cucumis melo OX=... [more]
tr|B9T0P0|B9T0P0_RICCO7.9e-2896.77Uncharacterized protein OS=Ricinus communis OX=3988 GN=RCOM_0126310 PE=4 SV=1[more]
tr|E9JFV8|E9JFV8_JATCU3.0e-2796.77Uncharacterized protein OS=Jatropha curcas OX=180498 PE=2 SV=1[more]
tr|A0A2C9VBL2|A0A2C9VBL2_MANES5.1e-2795.16Uncharacterized protein OS=Manihot esculenta OX=3983 GN=MANES_09G121600 PE=4 SV=... [more]
Annotated Terms
The following terms have been associated with this gene:
Vocabulary: INTERPRO
TermDefinition
IPR017384NADH_Ub_cplx-1_asu_su-1
GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
Category Term Accession Term Name
biological_process GO:0008150 biological_process
cellular_component GO:0016021 integral component of membrane
cellular_component GO:0005747 mitochondrial respiratory chain complex I
cellular_component GO:0005575 cellular_component
molecular_function GO:0003674 molecular_function
Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
CsGy4G016120.1CsGy4G016120.1mRNA


InterPro
Analysis Name: InterPro Annotations of cucumber Gy14 genome (v2)
Date Performed: 2018-09-25
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR017384NADH dehydrogenase [ubiquinone] (complex I), alpha subcomplex subunit 1PFAMPF15879MWFEcoord: 6..57
e-value: 1.2E-12
score: 47.7
IPR017384NADH dehydrogenase [ubiquinone] (complex I), alpha subcomplex subunit 1PANTHERPTHR17098NADH-UBIQUINONE OXIDOREDUCTASE MWFE SUBUNITcoord: 5..62

Synteny
The following gene(s) are orthologous to this gene:
GeneOrthologueOrganismBlock
CsGy4G016120Cla012052Watermelon (97103) v1cgybwmB314
CsGy4G016120Csa4G337280Cucumber (Chinese Long) v2cgybcuB167
CsGy4G016120MELO3C025258Melon (DHL92) v3.5.1cgybmeB284
CsGy4G016120ClCG04G006170Watermelon (Charleston Gray)cgybwcgB282
CsGy4G016120CSPI04G16790Wild cucumber (PI 183967)cgybcpiB170
CsGy4G016120CmaCh03G002760Cucurbita maxima (Rimu)cgybcmaB533
CsGy4G016120CmaCh07G012010Cucurbita maxima (Rimu)cgybcmaB567
CsGy4G016120CmoCh07G012440Cucurbita moschata (Rifu)cgybcmoB541
CsGy4G016120CmoCh03G002880Cucurbita moschata (Rifu)cgybcmoB507
CsGy4G016120Cp4.1LG19g01690Cucurbita pepo (Zucchini)cgybcpeB520
CsGy4G016120Cp4.1LG10g07300Cucurbita pepo (Zucchini)cgybcpeB463
CsGy4G016120MELO3C025258.2Melon (DHL92) v3.6.1cgybmedB284
CsGy4G016120CsaV3_4G027390Cucumber (Chinese Long) v3cgybcucB171
CsGy4G016120Cla97C04G072720Watermelon (97103) v2cgybwmbB282
CsGy4G016120Carg12636Silver-seed gourdcarcgybB0298
CsGy4G016120Carg19535Silver-seed gourdcarcgybB0626
The following gene(s) are paralogous to this gene:

None

The following block(s) are covering this gene:
GeneOrganismBlock
CsGy4G016120Cucurbita maxima (Rimu)cgybcmaB550
CsGy4G016120Cucurbita maxima (Rimu)cgybcmaB561
CsGy4G016120Cucurbita moschata (Rifu)cgybcmoB525
CsGy4G016120Cucurbita moschata (Rifu)cgybcmoB536
CsGy4G016120Cucurbita pepo (Zucchini)cgybcpeB514
CsGy4G016120Cucurbita pepo (Zucchini)cgybcpeB576
CsGy4G016120Bottle gourd (USVL1VR-Ls)cgyblsiB236
CsGy4G016120Silver-seed gourdcarcgybB0019
CsGy4G016120Wax gourdcgybwgoB374