CmaCh07G012010 (gene) Cucurbita maxima (Rimu) | Cucurbit Genomics Database (CuGenDB)

Overview


Name	CmaCh07G012010
Type	gene
Organism	Cucurbita maxima (Cucurbita maxima (Rimu))
Description	NADH dehydrogenase [ubiquinone] 1 alpha subcomplex subunit 1
Location	Cma_Chr07 : 6596117 .. 6600114 (-)

Genome Viewer

Gene Expression

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonfive_prime_UTRCDSthree_prime_UTR

Hold the cursor over a type above to highlight its positions in the sequence below.

AAGACACCGGAATTTTTGACAGGAGAGAGAAAAATGGCATGGAGATGGATGGAAGCGGCACTTCCTCTTGGAATTATCGCCGGAATGCTCTGTATAATGGGGAATGCTCAATATCATATTCACAAAGCCGCACATGGCCGGGTAATTAACTTTGTACTTGTTTTAATTTTGATTTTTTCTCTCTTCTTTGCTCAATGGATCCCCTTTCTCTCAGTTTCGATCAACGATCTCTATATGTTGTTCGTTTTTTTTTTTTTTTTTTCCTTTGGTTTTGCAGCCGAAGCACATCGGTAATGATATGTGGGACGTTGCCATGGAACGCAGGGACAAGAAACTCGTGGAGAATTTCTCCGCCGCTTCTCATTGATAATTTTGTAGACCTGCATCTCCTGGTACATGTTTATACGTTATTATTACTGTTTTTTAGTTTTTGAGAAGCTTAAGTTTGGGGATATGAAGCTCATAGGACAATCCTCTTTCTTGATGGGTAGTTGTTCCATCTCTTGGACTTGGAGAATGTTGAATTTGAAATGAATGCTAGCAAATAGTCGTAGGCAACGATTACAAAATGTTGATTTTGATACTCGAGGTTCAGTGTGTGTGTGTGTGTGTGTTTCAAGAAACTGAACGAATATACAAAAACATACAAAAAAAAAAAAGAAGAATCCCTCAACTCCGAAGAAGATGGTCAAGTTCCTCTAATGCTTCTCACAGGGAACACCACTGAGGTCCCAAACGGAGAGAAGAATGCCTCTCCACACAATCTAGGGTGTCGACTTTCTCGTACCAAACAAAGAACTTGATCTTATTTGGGATTTTAGCCCTCCAAAGCGACGAGAACAGCGGCATTGGGGATGAGAGAGGGGGCATATAAAAGCAACAACAAGAGGTGCAAGAAAATTCTGGGATGGACTAGGAGTCCAAAAGTGGAAGTCTCTCTTCCCTTGAAAGACATGGGCATCCTCCCACCAAAACTAGCAACTCAAAAGCTTCCAACAGCTCCCTATTTGTCAATGGATGACAAAGCTTCAAGGACAATTAGGAAGAGGATTCTGAAGGTACAATACAAAGGCCACAAGGTGCATCTTCAAATCAGAAAGGAGATACAAGTGAGGTAATAAAGAGAAAATATCCCTCCCCCACCCGGTGGTCTTCTTAGAAATAAGTCATGAACCCATTCCCCAATGGAACAAGAAACAAATTGAGAGAGGAAGGGGACCAAGGAAGAAATAGCTTTCTAGGGATCGTTAAGCAAACCCAAATGCCCACTACTAGAGACTGACTTGATAGGGTGTGGCTCATACTTGCTCACAGTGACCTTATGCCATAAAAAATTAGGCTCCTAAAAGAAATGTCACATCCATTTAGCCAACAAAGCCTCATTTTGGCACCTTAGGTTACCAACTGTGACGCTAGAGTCCTGGGCTATGATCTGGATTCCAAATCCTGGTTTGGGTTTGAATCCTGGGCATGGAGCGTTGCACTAACGCCGAAACCCCCCAACTCTAAAGGCTACAAAGCACTTCACAACTAACTAAATGAGATCCTTTCCCCTTATCAACCCCCTCCCATTAGAAATCCCTCAAGATCTTCTTCACTGCCGTACTAACCCACACTAGGATTTTAAAAAGAGAAAGGAAATAGACTTGAACCCCACTCAAAACCGCATAAACAAGGGTAAGTATACCTCTCTCAGGGAACAAAATTCCTTTCCAAGAAGAGAAACAATTTTGAATTCTCTCAAGAGTCGGATTCCAAAAAACCTTACTCCTGAGGTTATGACGTGGAGGAAGCCCAGGATATGAGACAGCCACAGTAAAGTGATTCACCCGACACCACACTAAGAAGCTCATAAACTCAACTTGGAAGGGTCAAAAGAAAAGAGTACCATAAGAAATCTAAAGATACTAAAGCCCAACTCTGTCTCCACCCACCCGAAACCCTCAATACTCCCCTTCTCTACCCCAACCCAGTGCATACGTATTAATAATAAGATAATCTCTAAGTCAAAGGAGTTGTGGTAACACTCATTTTAAAGCTGACGGAGGTTGATTATAAAAATGTCCAGGCACTCCATTAGCAAGGTCAAGTGGTCTGAAAGATCCCCAAATCTCCAAAATTGTCTGTTTCATCGAAAGTGCTTTGTTTCTCTGCTCCCCCAAAATATGACGGCAGATTTAAGCTAGTTTGTGTGTCCATTGTGTTGCTAGGCTATGTGATTCAGTTTTTGATTAGCTGCTGATAGTTGGTTAGGTTAATTGTTGTTTATAGAGCTTGTACATTTACAACAAAAAACCTCAGAGAAAGAACTAGGGGTGCATAACAATTGGTTAGCGGTGGTTTTGGGTCCAAACTGATGCCATAAACTGGCGTATTGGTTTTCACATAGTGTAAATTGATGGCTTTATAAATTGTCTAATCACCCGTCAGTTTGGTCGGCTTTGTTTCAATGGTGACTGATAGATAAGATGAGAACGAGTGAAGTTGAGATGAAGGCTAATGCATGAGTTGGAATTAAGAGAGTAAGAGTCAGTGTTAGAGGGCTGAGAGTGAGAACTGAGAGGGAGAACTGCGCTGCAGATGTTTAGTGAGGATTGAGAGGGAGCTGAAGTCGGAAGCATGTGGCATGGCCTGAGTGAGTTAGGGCTGGTTGAGATTTGAGAAATGAGAGGGAGGGTGTCCAGTACGTAAAAGAAAACTAAGGTGAATATTTTCAACACAAAAAAAAAAAAAAAAAAAAAAAGAAGGNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAACAGAAGGTAAGAGAGAGCCAAACGATGCAGAAGTGCAGAGCAGGTTTTAAATTTATTTACTTGTTTTTTCAATTGGTTGGAGAGGCATTTTCTGGCCACTCCAGCCGATGTGTGTGGTTCAAGCTGACGGCCGATGTTGGTTTTGATTGGTTTTCTTGATTCCCTTGTTTACACCTCTCGGAGTTTGTGCGCCAGCTTAACTCTCTGAGTTTATCAAGAAAATTGGATTTGTGGCAGCTCTAGTGCCCATTTTGTCATAAAGTTCTTAAAAGTTTGGGACAAGTTCCATTGATGTCTAAAGCCTAATCTAGTCCTTTCTGAACAGTTTTAGGCATAAACTTGACTTTTATTTCCTCTTTTTGTTGGTGTGAATTTTGTGGTGCTGCTGCACTGGAAGGATTTCTTTCTGAAATATCACATCAAGCAACGCCTTGTGTAAAAAGAGGAAGTTCTAAACCAAGTCAAATCCCTTTTGTTAGCTACATAGAGCCTTGAAACTCAAAATGCGCTCTTTTGAAATTTGAACATTTGTAAGATCCCTTGCTCACGTACACATATTCTCTTGAAGGTTTCGTGCAAGATTTCAATTTTATTTCAACCACTCTCAGCTTTGCAACCAAAGCCTTTTGGACCTTTTCTTTTTCTTTTAATTCCTCACTATACTTAAGGAGACTCTTGTATTTAGCACTAACGCTAATGCAGTCCTAGATGCAGGAGTTGTGGCGGATGTTCTCTTGACGAAGGAATAAAAGTTTTTGTTGCAGAACGCAGATGTTTGTGCATGGATGATCACTGCCATACACTGTCAGTTTTCTTCATTGTTCCAATCTTGATCTGAACATATGTAGAATTGATCATCCAGAATTACTTTCTATATCAAAGTAGATGTTCTCCTGAATGTTGATTTCTGAGTTCTGTTTTCTTAAGCTACACTTGCCTACTCGAACAGGTGAACCCCTGTACTTAATTAAATGATTGATGAATAGCTTGAAATTCTTGTAAATTTTTGTTTTTCTTCACCCTTATCCCATACGAAACAGAGTTGTCGAAAACATGATAGTTGGATGTGGCTGGATCATGTGCCATAATGTTCAATAACACCAGGTTGCTTTCCAG

mRNA sequence

AAGACACCGGAATTTTTGACAGGAGAGAGAAAAATGGCATGGAGATGGATGGAAGCGGCACTTCCTCTTGGAATTATCGCCGGAATGCTCTGTATAATGGGGAATGCTCAATATCATATTCACAAAGCCGCACATGGCCGGCCGAAGCACATCGGTAATGATATGTGGGACGTTGCCATGGAACGCAGGGACAAGAAACTCGTGGAGAATTTCTCCGCCGCTTCTCATTGATAATTTTGTAGACCTGCATCTCCTGTCCTAGATGCAGGAGTTGTGGCGGATGTTCTCTTGACGAAGGAATAAAAGTTTTTGTTGCAGAACGCAGATGTTTGTGCATGGATGATCACTGCCATACACTGTCAGTTTTCTTCATTGTTCCAATCTTGATCTGAACATATGTAGAATTGATCATCCAGAATTACTTTCTATATCAAAGTAGATGTTCTCCTGAATGTTGATTTCTGAGTTCTGTTTTCTTAAGCTACACTTGCCTACTCGAACAGGTGAACCCCTGTACTTAATTAAATGATTGATGAATAGCTTGAAATTCTTGTAAATTTTTGTTTTTCTTCACCCTTATCCCATACGAAACAGAGTTGTCGAAAACATGATAGTTGGATGTGGCTGGATCATGTGCCATAATGTTCAATAACACCAGGTTGCTTTCCAG

Coding sequence (CDS)

ATGGCATGGAGATGGATGGAAGCGGCACTTCCTCTTGGAATTATCGCCGGAATGCTCTGTATAATGGGGAATGCTCAATATCATATTCACAAAGCCGCACATGGCCGGCCGAAGCACATCGGTAATGATATGTGGGACGTTGCCATGGAACGCAGGGACAAGAAACTCGTGGAGAATTTCTCCGCCGCTTCTCATTGA

Protein sequence

MAWRWMEAALPLGIIAGMLCIMGNAQYHIHKAAHGRPKHIGNDMWDVAMERRDKKLVENFSAASH

Homology

[Close]

BLAST of CmaCh07G012010 vs. Swiss-Prot
Match: NDUA1_ARATH (NADH dehydrogenase [ubiquinone] 1 alpha subcomplex subunit 1 OS=Arabidopsis thaliana GN=At3g08610 PE=3 SV=1)

HSP 1 Score: 105.1 bits (261), Expect = 2.9e-22
Identity = 48/64 (75.00%), Postives = 55/64 (85.94%), Query Frame = 1


Query: 1  MAWRWMEAALPLGIIAGMLCIMGNAQYHIHKAAHGRPKHIGNDMWDVAMERRDKKLVENF 60
          M+  W+EA LPLGII GMLCIMGN+QY+IHKA HGRPKHIG+D WDVAMERRDKK+VE  
Sbjct: 1  MSLVWLEAMLPLGIIGGMLCIMGNSQYYIHKAYHGRPKHIGHDEWDVAMERRDKKVVEKA 60

Query: 61 SAAS 65
          +A S
Sbjct: 61 AAPS 64

[Close]

BLAST of CmaCh07G012010 vs. TrEMBL
Match: A0A0A0L2Y7_CUCSA (Uncharacterized protein OS=Cucumis sativus GN=Csa_4G337280 PE=4 SV=1)

HSP 1 Score: 132.9 bits (333), Expect = 1.4e-28
Identity = 59/63 (93.65%), Postives = 62/63 (98.41%), Query Frame = 1


Query: 3  WRWMEAALPLGIIAGMLCIMGNAQYHIHKAAHGRPKHIGNDMWDVAMERRDKKLVENFSA 62
          WRW+EAALPLGIIAGMLC+MGNAQY+IHKAAHGRPKHIGNDMWDVAMERRDKKLVEN SA
Sbjct: 4  WRWLEAALPLGIIAGMLCVMGNAQYYIHKAAHGRPKHIGNDMWDVAMERRDKKLVENLSA 63

Query: 63 ASH 66
          ASH
Sbjct: 64 ASH 66

[Close]

BLAST of CmaCh07G012010 vs. TrEMBL
Match: B9T0P0_RICCO (Putative uncharacterized protein OS=Ricinus communis GN=RCOM_0126310 PE=4 SV=1)

HSP 1 Score: 128.6 bits (322), Expect = 2.7e-27
Identity = 57/64 (89.06%), Postives = 62/64 (96.88%), Query Frame = 1


Query: 1  MAWRWMEAALPLGIIAGMLCIMGNAQYHIHKAAHGRPKHIGNDMWDVAMERRDKKLVENF 60
          M+WRW+EAALPLGIIAGMLC+MGNAQY+IH+AAHGRPKHIGNDMWDVAMERRDKKLVEN 
Sbjct: 1  MSWRWLEAALPLGIIAGMLCVMGNAQYYIHRAAHGRPKHIGNDMWDVAMERRDKKLVENL 60

Query: 61 SAAS 65
          SA S
Sbjct: 61 SAPS 64

[Close]

BLAST of CmaCh07G012010 vs. TrEMBL
Match: E9JFV8_JATCU (Putative uncharacterized protein OS=Jatropha curcas PE=2 SV=1)

HSP 1 Score: 127.9 bits (320), Expect = 4.6e-27
Identity = 58/64 (90.62%), Postives = 61/64 (95.31%), Query Frame = 1


Query: 1  MAWRWMEAALPLGIIAGMLCIMGNAQYHIHKAAHGRPKHIGNDMWDVAMERRDKKLVENF 60
          MAW W+EAALPLGIIAGMLC+MGNAQY+IHKAAHGRPKHIGNDMWDVAMERRDKKLVEN 
Sbjct: 1  MAWIWLEAALPLGIIAGMLCVMGNAQYYIHKAAHGRPKHIGNDMWDVAMERRDKKLVENL 60

Query: 61 SAAS 65
          SA S
Sbjct: 61 SAPS 64

[Close]

BLAST of CmaCh07G012010 vs. TrEMBL
Match: A0A061EHP1_THECC (NADH dehydrogenase [ubiquinone] 1 alpha subcomplex subunit 1 OS=Theobroma cacao GN=TCM_019652 PE=4 SV=1)

HSP 1 Score: 124.8 bits (312), Expect = 3.9e-26
Identity = 57/64 (89.06%), Postives = 60/64 (93.75%), Query Frame = 1


Query: 1  MAWRWMEAALPLGIIAGMLCIMGNAQYHIHKAAHGRPKHIGNDMWDVAMERRDKKLVENF 60
          MAW W+EAALPLGIIAGMLCIMGNAQY IHKA HGRPKHIGNDMWDVAMERRDKKL+EN 
Sbjct: 1  MAWIWLEAALPLGIIAGMLCIMGNAQYQIHKAYHGRPKHIGNDMWDVAMERRDKKLLENL 60

Query: 61 SAAS 65
          SA+S
Sbjct: 61 SASS 64

[Close]

BLAST of CmaCh07G012010 vs. TrEMBL
Match: D7UBK7_VITVI (Putative uncharacterized protein OS=Vitis vinifera GN=VIT_11s0103g00270 PE=4 SV=1)

HSP 1 Score: 121.3 bits (303), Expect = 4.3e-25
Identity = 53/64 (82.81%), Postives = 61/64 (95.31%), Query Frame = 1


Query: 1  MAWRWMEAALPLGIIAGMLCIMGNAQYHIHKAAHGRPKHIGNDMWDVAMERRDKKLVENF 60
          M W W++AALPLGIIAGMLC+MGNAQ++IHKAAHGRPKH+GND+WDVAMERRDKKLVE+ 
Sbjct: 1  MGWVWLQAALPLGIIAGMLCVMGNAQFYIHKAAHGRPKHVGNDLWDVAMERRDKKLVESS 60

Query: 61 SAAS 65
          SAAS
Sbjct: 61 SAAS 64

[Close]

BLAST of CmaCh07G012010 vs. TAIR10
Match: AT3G08610.1 (AT3G08610.1 unknown protein)

HSP 1 Score: 105.1 bits (261), Expect = 1.6e-23
Identity = 48/64 (75.00%), Postives = 55/64 (85.94%), Query Frame = 1


Query: 1  MAWRWMEAALPLGIIAGMLCIMGNAQYHIHKAAHGRPKHIGNDMWDVAMERRDKKLVENF 60
          M+  W+EA LPLGII GMLCIMGN+QY+IHKA HGRPKHIG+D WDVAMERRDKK+VE  
Sbjct: 1  MSLVWLEAMLPLGIIGGMLCIMGNSQYYIHKAYHGRPKHIGHDEWDVAMERRDKKVVEKA 60

Query: 61 SAAS 65
          +A S
Sbjct: 61 AAPS 64

[Close]

BLAST of CmaCh07G012010 vs. NCBI nr
Match: gi|449449833|ref|XP_004142669.1| (PREDICTED: NADH dehydrogenase [ubiquinone])

HSP 1 Score: 132.9 bits (333), Expect = 2.0e-28
Identity = 59/63 (93.65%), Postives = 62/63 (98.41%), Query Frame = 1


Query: 3  WRWMEAALPLGIIAGMLCIMGNAQYHIHKAAHGRPKHIGNDMWDVAMERRDKKLVENFSA 62
          WRW+EAALPLGIIAGMLC+MGNAQY+IHKAAHGRPKHIGNDMWDVAMERRDKKLVEN SA
Sbjct: 4  WRWLEAALPLGIIAGMLCVMGNAQYYIHKAAHGRPKHIGNDMWDVAMERRDKKLVENLSA 63

Query: 63 ASH 66
          ASH
Sbjct: 64 ASH 66

[Close]

BLAST of CmaCh07G012010 vs. NCBI nr
Match: gi|659126648|ref|XP_008463294.1| (PREDICTED: NADH dehydrogenase [ubiquinone])

HSP 1 Score: 131.3 bits (329), Expect = 5.9e-28
Identity = 58/63 (92.06%), Postives = 61/63 (96.83%), Query Frame = 1


Query: 3  WRWMEAALPLGIIAGMLCIMGNAQYHIHKAAHGRPKHIGNDMWDVAMERRDKKLVENFSA 62
          WRW+EAALPLGIIAGMLC+MGNAQY+IHKAAHGRPKHIGNDMWDVAMERRDKKLVEN SA
Sbjct: 4  WRWLEAALPLGIIAGMLCVMGNAQYYIHKAAHGRPKHIGNDMWDVAMERRDKKLVENLSA 63

Query: 63 ASH 66
           SH
Sbjct: 64 TSH 66

[Close]

BLAST of CmaCh07G012010 vs. NCBI nr
Match: gi|255582024|ref|XP_002531809.1| (PREDICTED: NADH dehydrogenase [ubiquinone])

HSP 1 Score: 128.6 bits (322), Expect = 3.9e-27
Identity = 57/64 (89.06%), Postives = 62/64 (96.88%), Query Frame = 1


Query: 1  MAWRWMEAALPLGIIAGMLCIMGNAQYHIHKAAHGRPKHIGNDMWDVAMERRDKKLVENF 60
          M+WRW+EAALPLGIIAGMLC+MGNAQY+IH+AAHGRPKHIGNDMWDVAMERRDKKLVEN 
Sbjct: 1  MSWRWLEAALPLGIIAGMLCVMGNAQYYIHRAAHGRPKHIGNDMWDVAMERRDKKLVENL 60

Query: 61 SAAS 65
          SA S
Sbjct: 61 SAPS 64

[Close]

BLAST of CmaCh07G012010 vs. NCBI nr
Match: gi|802777893|ref|XP_012091003.1| (PREDICTED: NADH dehydrogenase [ubiquinone])

HSP 1 Score: 127.9 bits (320), Expect = 6.6e-27
Identity = 58/64 (90.62%), Postives = 61/64 (95.31%), Query Frame = 1


Query: 1  MAWRWMEAALPLGIIAGMLCIMGNAQYHIHKAAHGRPKHIGNDMWDVAMERRDKKLVENF 60
          MAW W+EAALPLGIIAGMLC+MGNAQY+IHKAAHGRPKHIGNDMWDVAMERRDKKLVEN 
Sbjct: 1  MAWIWLEAALPLGIIAGMLCVMGNAQYYIHKAAHGRPKHIGNDMWDVAMERRDKKLVENL 60

Query: 61 SAAS 65
          SA S
Sbjct: 61 SAPS 64

[Close]

BLAST of CmaCh07G012010 vs. NCBI nr
Match: gi|590653571|ref|XP_007033460.1| (NADH dehydrogenase [ubiquinone])

HSP 1 Score: 124.8 bits (312), Expect = 5.6e-26
Identity = 57/64 (89.06%), Postives = 60/64 (93.75%), Query Frame = 1


Query: 1  MAWRWMEAALPLGIIAGMLCIMGNAQYHIHKAAHGRPKHIGNDMWDVAMERRDKKLVENF 60
          MAW W+EAALPLGIIAGMLCIMGNAQY IHKA HGRPKHIGNDMWDVAMERRDKKL+EN 
Sbjct: 1  MAWIWLEAALPLGIIAGMLCIMGNAQYQIHKAYHGRPKHIGNDMWDVAMERRDKKLLENL 60

Query: 61 SAAS 65
          SA+S
Sbjct: 61 SASS 64

The following BLAST results are available for this feature:

BLAST of CmaCh07G012010 vs. Swiss-Prot


Match Name	E-value	Identity	Description
NDUA1_ARATH	2.9e-22	75.00	NADH dehydrogenase [ubiquinone] 1 alpha subcomplex subunit 1 OS=Arabidopsis thal...	[more]

BLAST of CmaCh07G012010 vs. TrEMBL


Match Name	E-value	Identity	Description
A0A0A0L2Y7_CUCSA	1.4e-28	93.65	Uncharacterized protein OS=Cucumis sativus GN=Csa_4G337280 PE=4 SV=1	[more]
B9T0P0_RICCO	2.7e-27	89.06	Putative uncharacterized protein OS=Ricinus communis GN=RCOM_0126310 PE=4 SV=1	[more]
E9JFV8_JATCU	4.6e-27	90.63	Putative uncharacterized protein OS=Jatropha curcas PE=2 SV=1	[more]
A0A061EHP1_THECC	3.9e-26	89.06	NADH dehydrogenase [ubiquinone] 1 alpha subcomplex subunit 1 OS=Theobroma cacao ...	[more]
D7UBK7_VITVI	4.3e-25	82.81	Putative uncharacterized protein OS=Vitis vinifera GN=VIT_11s0103g00270 PE=4 SV=...	[more]

BLAST of CmaCh07G012010 vs. TAIR10


Match Name	E-value	Identity	Description
AT3G08610.1	1.6e-23	75.00	unknown protein	[more]

BLAST of CmaCh07G012010 vs. NCBI nr


Match Name	E-value	Identity	Description
gi\|449449833\|ref\|XP_004142669.1\|	2.0e-28	93.65	PREDICTED: NADH dehydrogenase [ubiquinone]	[more]
gi\|659126648\|ref\|XP_008463294.1\|	5.9e-28	92.06	PREDICTED: NADH dehydrogenase [ubiquinone]	[more]
gi\|255582024\|ref\|XP_002531809.1\|	3.9e-27	89.06	PREDICTED: NADH dehydrogenase [ubiquinone]	[more]
gi\|802777893\|ref\|XP_012091003.1\|	6.6e-27	90.63	PREDICTED: NADH dehydrogenase [ubiquinone]	[more]
gi\|590653571\|ref\|XP_007033460.1\|	5.6e-26	89.06	NADH dehydrogenase [ubiquinone]	[more]

Annotated Terms

The following terms have been associated with this gene:

Vocabulary: **INTERPRO**
Term	Definition
IPR017384	NADH_Ub_cplx-1_asu_su-1

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0006120	mitochondrial electron transport, NADH to ubiquinone
biological_process	GO:0009853	photorespiration
biological_process	GO:0080129	proteasome core complex assembly
biological_process	GO:0015992	proton transport
biological_process	GO:0051788	response to misfolded protein
biological_process	GO:0006814	sodium ion transport
biological_process	GO:0006744	ubiquinone biosynthetic process
biological_process	GO:0006511	ubiquitin-dependent protein catabolic process
biological_process	GO:0008150	biological_process
cellular_component	GO:0005747	mitochondrial respiratory chain complex I
cellular_component	GO:0016021	integral component of membrane
cellular_component	GO:0005575	cellular_component
molecular_function	GO:0008137	NADH dehydrogenase (ubiquinone) activity
molecular_function	GO:0003674	molecular_function

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
CmaCh07G012010.1	CmaCh07G012010.1	mRNA

InterPro

Analysis Name: InterPro Annotations of Cucurbita maxima
Date Performed: 2017-05-20


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR017384	NADH dehydrogenase [ubiquinone] (complex I), alpha subcomplex subunit 1	PANTHER	PTHR17098	NADH-UBIQUINONE OXIDOREDUCTASE MWFE SUBUNIT	coord: 3..61 score: 1.1
IPR017384	NADH dehydrogenase [ubiquinone] (complex I), alpha subcomplex subunit 1	PFAM	PF15879	MWFE	coord: 5..56 score: 1.0
None	No IPR available	PANTHER	PTHR17098:SF2	NADH DEHYDROGENASE [UBIQUINONE] 1 ALPHA SUBCOMPLEX SUBUNIT 1	coord: 3..61 score: 1.1

Synteny

The following gene(s) are orthologous to this gene:


Gene	Orthologue	Organism	Block
CmaCh07G012010	Cucsa.130750	Cucumber (Gy14) v1	cgycmaB0357
CmaCh07G012010	Cla012052	Watermelon (97103) v1	cmawmB827
CmaCh07G012010	Csa4G337280	Cucumber (Chinese Long) v2	cmacuB866
CmaCh07G012010	MELO3C025258	Melon (DHL92) v3.5.1	cmameB801
CmaCh07G012010	ClCG04G006170	Watermelon (Charleston Gray)	cmawcgB761
CmaCh07G012010	CSPI04G16790	Wild cucumber (PI 183967)	cmacpiB882
CmaCh07G012010	CmoCh07G012440	Cucurbita moschata (Rifu)	cmacmoB875
CmaCh07G012010	CmoCh03G002880	Cucurbita moschata (Rifu)	cmacmoB859
CmaCh07G012010	Cp4.1LG10g07300	Cucurbita pepo (Zucchini)	cmacpeB867
CmaCh07G012010	Cp4.1LG19g01690	Cucurbita pepo (Zucchini)	cmacpeB880
CmaCh07G012010	MELO3C025258.2	Melon (DHL92) v3.6.1	cmamedB899
CmaCh07G012010	CsaV3_4G027390	Cucumber (Chinese Long) v3	cmacucB1020
CmaCh07G012010	Cla97C04G072720	Watermelon (97103) v2	cmawmbB890
CmaCh07G012010	CsGy4G016120	Cucumber (Gy14) v2	cgybcmaB567
CmaCh07G012010	Carg19535	Silver-seed gourd	carcmaB0888
CmaCh07G012010	Carg12636	Silver-seed gourd	carcmaB0398

The following gene(s) are paralogous to this gene:


Gene	Paralogue	Organism	Block
CmaCh07G012010	CmaCh03G002760	Cucurbita maxima (Rimu)	cmacmaB524

The following block(s) are covering this gene:


Gene	Organism	Block
CmaCh07G012010	Wax gourd	cmawgoB1071
CmaCh07G012010	Bottle gourd (USVL1VR-Ls)	cmalsiB791