CsGy4G005620 (gene) Cucumber (Gy14) v2
The following sequences are available for this feature:
Legend: five_prime_UTRexonCDS Hold the cursor over a type above to highlight its positions in the sequence below.ATTCTCATTCAACTCTCTATCCCTATTATTCCTCTTTCACGTAAACTAATGGCACGTTCATACGAAAAGCCTGCCTATTCCTCCATCGACGACAATGAGAAGCATCGAGAATTCGACCGTGACATCCGAGAAATGGTTTCCACCCTCACCAGTCGCTTGGGATTGCTTCGAAAAGGAGGTAAATATACTGTAGCTTAATGTTAGTGAGAGTTTTATAACATTTATTTGAACTGTTTAATCGAAAAGGTCGATGAGAATTTGGAGATATAATGTCTTAAATCGTCAGGTTATGTGTACTTTTAAGTTTGACACAATAGAGAGTTGTTGTCATGTATTATATCTAAACCAGTTTGATCATATATGAGTTATTTTGAAACCTTTAAAATTTTACTTAATTAGATGAGAGGTTCGCAACTTGAATCACTTAAACTTAATTTTATACTTTCAAATTCAATTTTCGTATTACGATATTTAAAAACATGTAGTGTTAAAAGTGATTTTAAGTAAGAAGTTAATCATCGTTGCATCACTTATCAAGGATTCTTAAAGTTTAGGATGTTGATAACGCATGCATGGGTCATAATCAATAGGTTCCGCCCAAAGCCATGAACTTGTTGACGACCAAGGCTCAAGCATCATCACACTTGCGGGAACCAACACAGGAGCCACCATGCGAGCAGAACTGAATGGGAAAACGACGAAGCTTGATCAGGACACAGGTGTGGACGAGAATGAGTCCCTCACCTCCTACATTAACAGCAACTTCCAAGCCATTAACAACTCCATCATGTTTGGAGGAAGCTACACAGGGAATGACCCTGGAGTTCACATGGAGTATACCTCTGATCTCCATGAAGAAGGCCATAAGGCTGAGAAAGGAGGGGCTAAAGGCAAGAAAGTTGGGAAAGATAATGCTGAGTCAGGTGGCTCATGGTTTTCAAAGGAATGA ATTCTCATTCAACTCTCTATCCCTATTATTCCTCTTTCACGTAAACTAATGGCACGTTCATACGAAAAGCCTGCCTATTCCTCCATCGACGACAATGAGAAGCATCGAGAATTCGACCGTGACATCCGAGAAATGGTTTCCACCCTCACCAGTCGCTTGGGATTGCTTCGAAAAGGAGGTTCCGCCCAAAGCCATGAACTTGTTGACGACCAAGGCTCAAGCATCATCACACTTGCGGGAACCAACACAGGAGCCACCATGCGAGCAGAACTGAATGGGAAAACGACGAAGCTTGATCAGGACACAGGTGTGGACGAGAATGAGTCCCTCACCTCCTACATTAACAGCAACTTCCAAGCCATTAACAACTCCATCATGTTTGGAGGAAGCTACACAGGGAATGACCCTGGAGTTCACATGGAGTATACCTCTGATCTCCATGAAGAAGGCCATAAGGCTGAGAAAGGAGGGGCTAAAGGCAAGAAAGTTGGGAAAGATAATGCTGAGTCAGGTGGCTCATGGTTTTCAAAGGAATGA ATGGCACGTTCATACGAAAAGCCTGCCTATTCCTCCATCGACGACAATGAGAAGCATCGAGAATTCGACCGTGACATCCGAGAAATGGTTTCCACCCTCACCAGTCGCTTGGGATTGCTTCGAAAAGGAGGTTCCGCCCAAAGCCATGAACTTGTTGACGACCAAGGCTCAAGCATCATCACACTTGCGGGAACCAACACAGGAGCCACCATGCGAGCAGAACTGAATGGGAAAACGACGAAGCTTGATCAGGACACAGGTGTGGACGAGAATGAGTCCCTCACCTCCTACATTAACAGCAACTTCCAAGCCATTAACAACTCCATCATGTTTGGAGGAAGCTACACAGGGAATGACCCTGGAGTTCACATGGAGTATACCTCTGATCTCCATGAAGAAGGCCATAAGGCTGAGAAAGGAGGGGCTAAAGGCAAGAAAGTTGGGAAAGATAATGCTGAGTCAGGTGGCTCATGGTTTTCAAAGGAATGA MARSYEKPAYSSIDDNEKHREFDRDIREMVSTLTSRLGLLRKGGSAQSHELVDDQGSSIITLAGTNTGATMRAELNGKTTKLDQDTGVDENESLTSYINSNFQAINNSIMFGGSYTGNDPGVHMEYTSDLHEEGHKAEKGGAKGKKVGKDNAESGGSWFSKE
BLAST of CsGy4G005620 vs. NCBI nr
Match: XP_004146521.1 (PREDICTED: uncharacterized protein LOC101210126 [Cucumis sativus] >KGN53335.1 hypothetical protein Csa_4G047960 [Cucumis sativus]) HSP 1 Score: 317.4 bits (812), Expect = 2.8e-83 Identity = 162/162 (100.00%), Postives = 162/162 (100.00%), Query Frame = 0
BLAST of CsGy4G005620 vs. NCBI nr
Match: XP_008452037.1 (PREDICTED: uncharacterized protein LOC103493165 [Cucumis melo]) HSP 1 Score: 304.3 bits (778), Expect = 2.5e-79 Identity = 158/164 (96.34%), Postives = 162/164 (98.78%), Query Frame = 0
BLAST of CsGy4G005620 vs. NCBI nr
Match: XP_023523114.1 (uncharacterized protein LOC111787298 [Cucurbita pepo subsp. pepo]) HSP 1 Score: 272.7 bits (696), Expect = 8.0e-70 Identity = 141/162 (87.04%), Postives = 150/162 (92.59%), Query Frame = 0
BLAST of CsGy4G005620 vs. NCBI nr
Match: XP_022931513.1 (uncharacterized protein LOC111437667 [Cucurbita moschata]) HSP 1 Score: 249.6 bits (636), Expect = 7.3e-63 Identity = 130/162 (80.25%), Postives = 141/162 (87.04%), Query Frame = 0
BLAST of CsGy4G005620 vs. NCBI nr
Match: XP_023551598.1 (uncharacterized protein LOC111809376 [Cucurbita pepo subsp. pepo]) HSP 1 Score: 249.2 bits (635), Expect = 9.5e-63 Identity = 132/162 (81.48%), Postives = 143/162 (88.27%), Query Frame = 0
BLAST of CsGy4G005620 vs. TAIR10
Match: AT1G63310.1 (unknown protein) HSP 1 Score: 91.3 bits (225), Expect = 6.0e-19 Identity = 59/143 (41.26%), Postives = 88/143 (61.54%), Query Frame = 0
BLAST of CsGy4G005620 vs. TAIR10
Match: AT1G75260.1 (oxidoreductases, acting on NADH or NADPH) HSP 1 Score: 54.3 bits (129), Expect = 8.1e-08 Identity = 42/136 (30.88%), Postives = 58/136 (42.65%), Query Frame = 0
BLAST of CsGy4G005620 vs. TrEMBL
Match: tr|A0A0A0KUN4|A0A0A0KUN4_CUCSA (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_4G047960 PE=4 SV=1) HSP 1 Score: 317.4 bits (812), Expect = 1.9e-83 Identity = 162/162 (100.00%), Postives = 162/162 (100.00%), Query Frame = 0
BLAST of CsGy4G005620 vs. TrEMBL
Match: tr|A0A1S3BSV6|A0A1S3BSV6_CUCME (uncharacterized protein LOC103493165 OS=Cucumis melo OX=3656 GN=LOC103493165 PE=4 SV=1) HSP 1 Score: 304.3 bits (778), Expect = 1.6e-79 Identity = 158/164 (96.34%), Postives = 162/164 (98.78%), Query Frame = 0
BLAST of CsGy4G005620 vs. TrEMBL
Match: tr|B9RYY5|B9RYY5_RICCO (Uncharacterized protein OS=Ricinus communis OX=3988 GN=RCOM_1314880 PE=4 SV=1) HSP 1 Score: 133.7 bits (335), Expect = 3.8e-28 Identity = 77/150 (51.33%), Postives = 104/150 (69.33%), Query Frame = 0
BLAST of CsGy4G005620 vs. TrEMBL
Match: tr|F6HUA8|F6HUA8_VITVI (Uncharacterized protein OS=Vitis vinifera OX=29760 GN=VIT_02s0025g03190 PE=4 SV=1) HSP 1 Score: 127.9 bits (320), Expect = 2.1e-26 Identity = 73/135 (54.07%), Postives = 95/135 (70.37%), Query Frame = 0
BLAST of CsGy4G005620 vs. TrEMBL
Match: tr|A0A1S2XCP6|A0A1S2XCP6_CICAR (uncharacterized protein LOC101511467 OS=Cicer arietinum OX=3827 GN=LOC101511467 PE=4 SV=1) HSP 1 Score: 125.2 bits (313), Expect = 1.4e-25 Identity = 72/150 (48.00%), Postives = 100/150 (66.67%), Query Frame = 0
The following BLAST results are available for this feature:
GO Assignments
This gene is annotated with the following GO terms.
The following mRNA feature(s) are a part of this gene:
Analysis Name: InterPro Annotations of cucumber Gy14 genome (v2)
Date Performed: 2018-09-25
The following gene(s) are orthologous to this gene:
The following gene(s) are paralogous to this gene: None The following block(s) are covering this gene: |