CmaCh16G005980 (gene) Cucurbita maxima (Rimu) | Cucurbit Genomics Database (CuGenDB)

Overview


Name	CmaCh16G005980
Type	gene
Organism	Cucurbita maxima (Cucurbita maxima (Rimu))
Description	oxidoreductases, acting on NADH or NADPH
Location	Cma_Chr16 : 3090803 .. 3091726 (-)

Genome Viewer

Gene Expression

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonfive_prime_UTRCDSthree_prime_UTR

Hold the cursor over a type above to highlight its positions in the sequence below.

CCATTTTCTTCCATCCCCTTTCTTCAACTCATCCATTCTCATTCAACCCCTTCCCATCCCTCTTTCACTTGCACTCTAATGGCGCCATCTTACGAAAAGCCCGCTCACTCCTCCGTCGACGACAACGAGAAGCATCGAGAATTCGGCGCCAAGGTCCAAGAAATGGCTTCCACCCTCACCAGTCGCTTGGGCATGATCCGAAAAGGAGGTAGCGTATTAAATCTTTTGTTTATTAAATCTAAATGAGTTGAATTATGTTTAAGTTTGAGCTCTTGTTATCAATAGGTACTGCTCACCACCATGAAGTCGTTGACGACCACGGCTCAAGTGTAATAACACTAGCTGGAACCAACACTGGTGCCACCATGCGTGCCGAGTTGAATGGTAAAGCCAAGAAGCTCGAGGATGCAGGCGTCGACAAGAACGAGCCCCTCACCTCCTACATTAACAGCAACTTCCAAGCCATCAACAACTCCATCATGTTCGGAGGTAGCTACACAGGCAATGACCCTGGAGTTCACATGAACATCACTGATCTTCATGAAGAAGGCCATAAGGCTGAGAAAGGAAGGGCTAAAAGCAAGAAGGTTGACAAGGAAAATGGCGAGTCCGGTGGCTCATTGCTTTCAAAGGAATGAGTTTTTTGGCGCACCATAAGTAATCATAATACATACATATATATATATATATATATATATTGTGCTATATAAGTACTAAAGATTCCAGAGGTTTGTATTACGAGTTTTTACGATTCTTGAAAGCTTAATAAACGGATCCACAATGTTCAAAACATGTATAGTATTATATATATAGCTAAACTCGAGGGGTTAAATTGAATTGTGAGTTACTTAAAATAATGAATTTTGGATGAAAGTTCGTGCTTATCTAATATGGTATTAGAGTCTGTTTTATGCTCGGTTAAAA

mRNA sequence

CCATTTTCTTCCATCCCCTTTCTTCAACTCATCCATTCTCATTCAACCCCTTCCCATCCCTCTTTCACTTGCACTCTAATGGCGCCATCTTACGAAAAGCCCGCTCACTCCTCCGTCGACGACAACGAGAAGCATCGAGAATTCGGCGCCAAGGTCCAAGAAATGGCTTCCACCCTCACCAGTCGCTTGGGCATGATCCGAAAAGGAGGTACTGCTCACCACCATGAAGTCGTTGACGACCACGGCTCAAGTGTAATAACACTAGCTGGAACCAACACTGGTGCCACCATGCGTGCCGAGTTGAATGGTAAAGCCAAGAAGCTCGAGGATGCAGGCGTCGACAAGAACGAGCCCCTCACCTCCTACATTAACAGCAACTTCCAAGCCATCAACAACTCCATCATGTTCGGAGGTAGCTACACAGGCAATGACCCTGGAGTTCACATGAACATCACTGATCTTCATGAAGAAGGCCATAAGGCTGAGAAAGGAAGGGCTAAAAGCAAGAAGGTTGACAAGGAAAATGGCGAGTCCGGTGGCTCATTGCTTTCAAAGGAATGAGTTTTTTGGCGCACCATAAGTAATCATAATACATACATATATATATATATATATATATATTGTGCTATATAAGTACTAAAGATTCCAGAGGTTTGTATTACGAGTTTTTACGATTCTTGAAAGCTTAATAAACGGATCCACAATGTTCAAAACATGTATAGTATTATATATATAGCTAAACTCGAGGGGTTAAATTGAATTGTGAGTTACTTAAAATAATGAATTTTGGATGAAAGTTCGTGCTTATCTAATATGGTATTAGAGTCTGTTTTATGCTCGGTTAAAA

Coding sequence (CDS)

ATGGCGCCATCTTACGAAAAGCCCGCTCACTCCTCCGTCGACGACAACGAGAAGCATCGAGAATTCGGCGCCAAGGTCCAAGAAATGGCTTCCACCCTCACCAGTCGCTTGGGCATGATCCGAAAAGGAGGTACTGCTCACCACCATGAAGTCGTTGACGACCACGGCTCAAGTGTAATAACACTAGCTGGAACCAACACTGGTGCCACCATGCGTGCCGAGTTGAATGGTAAAGCCAAGAAGCTCGAGGATGCAGGCGTCGACAAGAACGAGCCCCTCACCTCCTACATTAACAGCAACTTCCAAGCCATCAACAACTCCATCATGTTCGGAGGTAGCTACACAGGCAATGACCCTGGAGTTCACATGAACATCACTGATCTTCATGAAGAAGGCCATAAGGCTGAGAAAGGAAGGGCTAAAAGCAAGAAGGTTGACAAGGAAAATGGCGAGTCCGGTGGCTCATTGCTTTCAAAGGAATGA

Protein sequence

MAPSYEKPAHSSVDDNEKHREFGAKVQEMASTLTSRLGMIRKGGTAHHHEVVDDHGSSVITLAGTNTGATMRAELNGKAKKLEDAGVDKNEPLTSYINSNFQAINNSIMFGGSYTGNDPGVHMNITDLHEEGHKAEKGRAKSKKVDKENGESGGSLLSKE

Homology

[Close]

BLAST of CmaCh16G005980 vs. TrEMBL
Match: A0A0A0KUN4_CUCSA (Uncharacterized protein OS=Cucumis sativus GN=Csa_4G047960 PE=4 SV=1)

HSP 1 Score: 246.1 bits (627), Expect = 2.8e-62
Identity = 128/162 (79.01%), Postives = 140/162 (86.42%), Query Frame = 1


Query: 1   MAPSYEKPAHSSVDDNEKHREFGAKVQEMASTLTSRLGMIRKGGTAHHHEVVDDHGSSVI 60
           MA SYEKPA+SS+DDNEKHREF   ++EM STLTSRLG++RKGG+A  HE+VDD GSS+I
Sbjct: 1   MARSYEKPAYSSIDDNEKHREFDRDIREMVSTLTSRLGLLRKGGSAQSHELVDDQGSSII 60

Query: 61  TLAGTNTGATMRAELNGKAKKL-EDAGVDKNEPLTSYINSNFQAINNSIMFGGSYTGNDP 120
           TLAGTNTGATMRAELNGK  KL +D GVD+NE LTSYINSNFQAINNSIMFGGSYTGNDP
Sbjct: 61  TLAGTNTGATMRAELNGKTTKLDQDTGVDENESLTSYINSNFQAINNSIMFGGSYTGNDP 120

Query: 121 GVHMNIT-DLHEEGHKAEKGRAKSKKVDKENGESGGSLLSKE 161
           GVHM  T DLHEEGHKAEKG AK KKV K+N ESGGS  SKE
Sbjct: 121 GVHMEYTSDLHEEGHKAEKGGAKGKKVGKDNAESGGSWFSKE 162

[Close]

BLAST of CmaCh16G005980 vs. TrEMBL
Match: B9RYY5_RICCO (Putative uncharacterized protein OS=Ricinus communis GN=RCOM_1314880 PE=4 SV=1)

HSP 1 Score: 134.8 bits (338), Expect = 9.2e-29
Identity = 74/153 (48.37%), Postives = 104/153 (67.97%), Query Frame = 1


Query: 1   MAPSYEKPAHSSVDDNEKHREFGAKVQEMASTLTSRLGMIRKGGTAHHHEVV--DDHGSS 60
           ++ +  K   SS D N KH+ F  +V++M + +TSR+G + K G +HHH     D+HG  
Sbjct: 2   LSETTNKTTQSSSDAN-KHKPFDREVRDMVNAITSRVGDLHKPGASHHHRQTEEDEHGIR 61

Query: 61  VITLAGTNTGATMRAELNGKAKKLED-AGVDKNEPLTSYINSNFQAINNSIMFGGSYTGN 120
           +ITLAGTNTGATMR+EL+ K    +  +G D+ E L +Y+NSNFQA+NNSIMFG SY+ N
Sbjct: 62  IITLAGTNTGATMRSELDEKGTTPQGVSGDDQPEALGTYVNSNFQAVNNSIMFGSSYSTN 121

Query: 121 DPGVHMNITDLHEE--GHKAEKGRAKSKKVDKE 149
           DPGVH++I+D  E+  GHK ++   K KK + E
Sbjct: 122 DPGVHLDISDFFEQPHGHKPDRHARKGKKKETE 153

[Close]

BLAST of CmaCh16G005980 vs. TrEMBL
Match: A0A067LDW9_JATCU (Uncharacterized protein OS=Jatropha curcas GN=JCGZ_23625 PE=4 SV=1)

HSP 1 Score: 128.3 bits (321), Expect = 8.6e-27
Identity = 74/166 (44.58%), Postives = 105/166 (63.25%), Query Frame = 1


Query: 1   MAPSYEKPAHSSVD-DNEKHREFGAKVQEMASTLTSRLGMIRKGGTAHHHEVV---DDHG 60
           M P   KP +SS   D +KH+    +V++M + +TSR+  ++K G +HHH+     D+HG
Sbjct: 1   MVPETAKPTYSSSSFDGDKHKALDREVRDMVNAITSRVSDLQKSGVSHHHQQQGEDDEHG 60

Query: 61  SSVITLAGTNTGATMRAELNGKAK-KLEDAGVDKNEPLTSYINSNFQAINNSIMFGGSYT 120
             +ITLAGTNTGATMR+EL+ K     +    D+ E L +Y+NSNFQAINNSIM GGSY 
Sbjct: 61  VRIITLAGTNTGATMRSELDDKPNYNPQGLSGDEPEALGTYVNSNFQAINNSIMIGGSYN 120

Query: 121 GNDPGVHMNITDLHE------EGHKAEKGRAKSKKVDKENGESGGS 156
            NDPGVH++I+D+ E      +   A KG+ K K+  K + ++  S
Sbjct: 121 TNDPGVHLDISDIFEHHAYRPDTKHARKGKRKEKEAVKSDQQTDHS 166

[Close]

BLAST of CmaCh16G005980 vs. TrEMBL
Match: A0A151S2G9_CAJCA (Uncharacterized protein OS=Cajanus cajan GN=KK1_029356 PE=4 SV=1)

HSP 1 Score: 127.1 bits (318), Expect = 1.9e-26
Identity = 69/151 (45.70%), Postives = 98/151 (64.90%), Query Frame = 1


Query: 3   PSYEKPAHSSVDDNEKHREFGAKVQEMASTLTSRLGMIRKGGTAHHHEVVDDHGSSVITL 62
           PS  +P+HS   + EKH++   ++++M ST+T ++    K G+ HH    + HG S++ L
Sbjct: 2   PSPVQPSHSPSAEGEKHKQLDREIRDMVSTITHKVTDFHKPGSTHHLNNDEQHGLSMVAL 61

Query: 63  AGTNTGATMRAELNGKAKKLEDAGVDKNEPLTSYINSNFQAINNSIMFGGSYTGNDPGVH 122
            G N GATMR+EL+ K+        ++ E L++Y+NSNFQAINNSIMFGGSY  NDPGVH
Sbjct: 62  VGNNNGATMRSELDEKSGNPSHG--EEPEALSTYVNSNFQAINNSIMFGGSYQANDPGVH 121

Query: 123 MNITDL---HEEG--HKAEKGRAKSKKVDKE 149
           M+I+D    H +G  HK +K   K KK +KE
Sbjct: 122 MDISDFSTEHHQGHHHKEQKHGKKGKKKEKE 150

[Close]

BLAST of CmaCh16G005980 vs. TrEMBL
Match: A0A072VEM8_MEDTR (Uncharacterized protein OS=Medicago truncatula GN=MTR_2g016680 PE=4 SV=1)

HSP 1 Score: 123.6 bits (309), Expect = 2.1e-25
Identity = 71/150 (47.33%), Postives = 97/150 (64.67%), Query Frame = 1


Query: 7   KPAHSSVDDNEKHREFGAKVQEMASTLTSRLGMIRKGGTAHHHEVVDDHGSSVITLAGTN 66
           K + S   + EKH+    +++EM S +T R+    K G++HH +  D+ G+ +ITLAG N
Sbjct: 7   KSSQSPPAEGEKHKNLDREIREMVSAITHRVTGFHKPGSSHHLDNEDEQGTRIITLAGNN 66

Query: 67  TGATMRAELNGKAKKLEDAGVDKNEPLTSYINSNFQAINNSIMFGGSYTGNDPGVHMNIT 126
            GAT+R+EL+ K+ K      D+ E L++Y+NSNFQAINNSIM GGSY  NDPGVHM+I+
Sbjct: 67  EGATLRSELDAKSGKYSSH--DEAEALSTYVNSNFQAINNSIMLGGSYHANDPGVHMDIS 126

Query: 127 DLHE---EGHKAEKGRAKSKKVDKENGESG 154
           D  E      KAEK   K KK DK+ G+ G
Sbjct: 127 DFTEPPQNQQKAEKHGKKEKK-DKKKGKEG 153

[Close]

BLAST of CmaCh16G005980 vs. TAIR10
Match: AT1G63310.1 (AT1G63310.1 unknown protein)

HSP 1 Score: 80.5 bits (197), Expect = 1.0e-15
Identity = 52/134 (38.81%), Postives = 80/134 (59.70%), Query Frame = 1


Query: 15  DNEKHRE---FGAKVQEMASTLTSRLGMIRKGGTAHHHEVVDDHGSSVITLAGTNTGATM 74
           + EKHR    F  +++ M S+LT   G   K G + + E  ++ G  VITL+G+N GATM
Sbjct: 9   ETEKHRRQQHFEHELKNMISSLTHMGG--DKAGPSQYDE--EEDGIRVITLSGSNLGATM 68

Query: 75  RAELNGKAKKLEDAGVDKNEPLTSYINSNFQAINNSIMFGGSYTGNDPGVHMNIT-DLHE 134
           + EL+      +  G  + + L++Y+NSNFQA+NNSIM G  Y  +DPGVH++I+ D+ +
Sbjct: 69  KTELDNNHGDRDQNGDHELDFLSTYVNSNFQAVNNSIMIGAKYETHDPGVHLDISGDVEK 128

Query: 135 EGHKAEKGRAKSKK 145
              K     ++ KK
Sbjct: 129 PSVKIPARSSRGKK 138

[Close]

BLAST of CmaCh16G005980 vs. NCBI nr
Match: gi|449457570|ref|XP_004146521.1| (PREDICTED: uncharacterized protein LOC101210126 [Cucumis sativus])

HSP 1 Score: 246.1 bits (627), Expect = 4.1e-62
Identity = 128/162 (79.01%), Postives = 140/162 (86.42%), Query Frame = 1


Query: 1   MAPSYEKPAHSSVDDNEKHREFGAKVQEMASTLTSRLGMIRKGGTAHHHEVVDDHGSSVI 60
           MA SYEKPA+SS+DDNEKHREF   ++EM STLTSRLG++RKGG+A  HE+VDD GSS+I
Sbjct: 1   MARSYEKPAYSSIDDNEKHREFDRDIREMVSTLTSRLGLLRKGGSAQSHELVDDQGSSII 60

Query: 61  TLAGTNTGATMRAELNGKAKKL-EDAGVDKNEPLTSYINSNFQAINNSIMFGGSYTGNDP 120
           TLAGTNTGATMRAELNGK  KL +D GVD+NE LTSYINSNFQAINNSIMFGGSYTGNDP
Sbjct: 61  TLAGTNTGATMRAELNGKTTKLDQDTGVDENESLTSYINSNFQAINNSIMFGGSYTGNDP 120

Query: 121 GVHMNIT-DLHEEGHKAEKGRAKSKKVDKENGESGGSLLSKE 161
           GVHM  T DLHEEGHKAEKG AK KKV K+N ESGGS  SKE
Sbjct: 121 GVHMEYTSDLHEEGHKAEKGGAKGKKVGKDNAESGGSWFSKE 162

[Close]

BLAST of CmaCh16G005980 vs. NCBI nr
Match: gi|659102266|ref|XP_008452038.1| (PREDICTED: uncharacterized protein LOC103493165 isoform X2 [Cucumis melo])

HSP 1 Score: 242.7 bits (618), Expect = 4.5e-61
Identity = 127/163 (77.91%), Postives = 140/163 (85.89%), Query Frame = 1


Query: 1   MAPSYEKPAHSSVDDNEKHREFGAKVQEMASTLTSRLGMIRKGGTAHHHEVVDDHGSSVI 60
           MA SYEKPA+SS+DDNEKHREF   ++EM STLTSRLG++RKGGTA +HE+VDD GSSVI
Sbjct: 1   MARSYEKPAYSSIDDNEKHREFDRDIREMVSTLTSRLGLLRKGGTAQNHELVDDQGSSVI 60

Query: 61  TLAGTNTGATMRAELNGK--AKKLEDAGVDKNEPLTSYINSNFQAINNSIMFGGSYTGND 120
           TLAGTNTGATMRAELNGK   K  +D GVD++E LTSYINSNFQAINNSIMFGGSYTGND
Sbjct: 61  TLAGTNTGATMRAELNGKTMTKLDQDTGVDESESLTSYINSNFQAINNSIMFGGSYTGND 120

Query: 121 PGVHMNIT-DLHEEGHKAEKGRAKSKKVDKENGESGGSLLSKE 161
           PGVHM  T DLHEEGHKAEKG AK KK+ K+N ESGGS  SKE
Sbjct: 121 PGVHMEYTSDLHEEGHKAEKGGAKGKKIGKDNAESGGSWFSKE 163

[Close]

BLAST of CmaCh16G005980 vs. NCBI nr
Match: gi|659102264|ref|XP_008452037.1| (PREDICTED: uncharacterized protein LOC103493165 isoform X1 [Cucumis melo])

HSP 1 Score: 236.5 bits (602), Expect = 3.2e-59
Identity = 126/164 (76.83%), Postives = 140/164 (85.37%), Query Frame = 1


Query: 1   MAPSYEKPAHSSVDDNEKHREFGAKVQEMASTLTSRLGMIRKGGTA-HHHEVVDDHGSSV 60
           MA SYEKPA+SS+DDNEKHREF   ++EM STLTSRLG++RKGG+A  +HE+VDD GSSV
Sbjct: 1   MARSYEKPAYSSIDDNEKHREFDRDIREMVSTLTSRLGLLRKGGSAAQNHELVDDQGSSV 60

Query: 61  ITLAGTNTGATMRAELNGKA--KKLEDAGVDKNEPLTSYINSNFQAINNSIMFGGSYTGN 120
           ITLAGTNTGATMRAELNGK   K  +D GVD++E LTSYINSNFQAINNSIMFGGSYTGN
Sbjct: 61  ITLAGTNTGATMRAELNGKTMTKLDQDTGVDESESLTSYINSNFQAINNSIMFGGSYTGN 120

Query: 121 DPGVHMNIT-DLHEEGHKAEKGRAKSKKVDKENGESGGSLLSKE 161
           DPGVHM  T DLHEEGHKAEKG AK KK+ K+N ESGGS  SKE
Sbjct: 121 DPGVHMEYTSDLHEEGHKAEKGGAKGKKIGKDNAESGGSWFSKE 164

[Close]

BLAST of CmaCh16G005980 vs. NCBI nr
Match: gi|255555837|ref|XP_002518954.1| (PREDICTED: uncharacterized protein LOC8278482 [Ricinus communis])

HSP 1 Score: 134.8 bits (338), Expect = 1.3e-28
Identity = 74/153 (48.37%), Postives = 104/153 (67.97%), Query Frame = 1


Query: 1   MAPSYEKPAHSSVDDNEKHREFGAKVQEMASTLTSRLGMIRKGGTAHHHEVV--DDHGSS 60
           ++ +  K   SS D N KH+ F  +V++M + +TSR+G + K G +HHH     D+HG  
Sbjct: 2   LSETTNKTTQSSSDAN-KHKPFDREVRDMVNAITSRVGDLHKPGASHHHRQTEEDEHGIR 61

Query: 61  VITLAGTNTGATMRAELNGKAKKLED-AGVDKNEPLTSYINSNFQAINNSIMFGGSYTGN 120
           +ITLAGTNTGATMR+EL+ K    +  +G D+ E L +Y+NSNFQA+NNSIMFG SY+ N
Sbjct: 62  IITLAGTNTGATMRSELDEKGTTPQGVSGDDQPEALGTYVNSNFQAVNNSIMFGSSYSTN 121

Query: 121 DPGVHMNITDLHEE--GHKAEKGRAKSKKVDKE 149
           DPGVH++I+D  E+  GHK ++   K KK + E
Sbjct: 122 DPGVHLDISDFFEQPHGHKPDRHARKGKKKETE 153

[Close]

BLAST of CmaCh16G005980 vs. NCBI nr
Match: gi|802562577|ref|XP_012066443.1| (PREDICTED: uncharacterized protein LOC105629456 [Jatropha curcas])

HSP 1 Score: 128.3 bits (321), Expect = 1.2e-26
Identity = 74/166 (44.58%), Postives = 105/166 (63.25%), Query Frame = 1


Query: 1   MAPSYEKPAHSSVD-DNEKHREFGAKVQEMASTLTSRLGMIRKGGTAHHHEVV---DDHG 60
           M P   KP +SS   D +KH+    +V++M + +TSR+  ++K G +HHH+     D+HG
Sbjct: 1   MVPETAKPTYSSSSFDGDKHKALDREVRDMVNAITSRVSDLQKSGVSHHHQQQGEDDEHG 60

Query: 61  SSVITLAGTNTGATMRAELNGKAK-KLEDAGVDKNEPLTSYINSNFQAINNSIMFGGSYT 120
             +ITLAGTNTGATMR+EL+ K     +    D+ E L +Y+NSNFQAINNSIM GGSY 
Sbjct: 61  VRIITLAGTNTGATMRSELDDKPNYNPQGLSGDEPEALGTYVNSNFQAINNSIMIGGSYN 120

Query: 121 GNDPGVHMNITDLHE------EGHKAEKGRAKSKKVDKENGESGGS 156
            NDPGVH++I+D+ E      +   A KG+ K K+  K + ++  S
Sbjct: 121 TNDPGVHLDISDIFEHHAYRPDTKHARKGKRKEKEAVKSDQQTDHS 166

The following BLAST results are available for this feature:

BLAST of CmaCh16G005980 vs. Swiss-Prot


Match Name	E-value	Identity	Description

BLAST of CmaCh16G005980 vs. TrEMBL


Match Name	E-value	Identity	Description
A0A0A0KUN4_CUCSA	2.8e-62	79.01	Uncharacterized protein OS=Cucumis sativus GN=Csa_4G047960 PE=4 SV=1	[more]
B9RYY5_RICCO	9.2e-29	48.37	Putative uncharacterized protein OS=Ricinus communis GN=RCOM_1314880 PE=4 SV=1	[more]
A0A067LDW9_JATCU	8.6e-27	44.58	Uncharacterized protein OS=Jatropha curcas GN=JCGZ_23625 PE=4 SV=1	[more]
A0A151S2G9_CAJCA	1.9e-26	45.70	Uncharacterized protein OS=Cajanus cajan GN=KK1_029356 PE=4 SV=1	[more]
A0A072VEM8_MEDTR	2.1e-25	47.33	Uncharacterized protein OS=Medicago truncatula GN=MTR_2g016680 PE=4 SV=1	[more]

BLAST of CmaCh16G005980 vs. TAIR10


Match Name	E-value	Identity	Description
AT1G63310.1	1.0e-15	38.81	unknown protein	[more]

BLAST of CmaCh16G005980 vs. NCBI nr


Match Name	E-value	Identity	Description
gi\|449457570\|ref\|XP_004146521.1\|	4.1e-62	79.01	PREDICTED: uncharacterized protein LOC101210126 [Cucumis sativus]	[more]
gi\|659102266\|ref\|XP_008452038.1\|	4.5e-61	77.91	PREDICTED: uncharacterized protein LOC103493165 isoform X2 [Cucumis melo]	[more]
gi\|659102264\|ref\|XP_008452037.1\|	3.2e-59	76.83	PREDICTED: uncharacterized protein LOC103493165 isoform X1 [Cucumis melo]	[more]
gi\|255555837\|ref\|XP_002518954.1\|	1.3e-28	48.37	PREDICTED: uncharacterized protein LOC8278482 [Ricinus communis]	[more]
gi\|802562577\|ref\|XP_012066443.1\|	1.2e-26	44.58	PREDICTED: uncharacterized protein LOC105629456 [Jatropha curcas]	[more]

Annotated Terms

The following terms have been associated with this gene:

Vocabulary: **INTERPRO**
Term	Definition

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0008150	biological_process
cellular_component	GO:0005575	cellular_component
molecular_function	GO:0003674	molecular_function

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
CmaCh16G005980.1	CmaCh16G005980.1	mRNA

InterPro

Analysis Name: InterPro Annotations of Cucurbita maxima
Date Performed: 2017-05-20


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
None	No IPR available	PANTHER	PTHR33472	FAMILY NOT NAMED	coord: 4..131 score: 5.5

Synteny

The following gene(s) are orthologous to this gene:


Gene	Orthologue	Organism	Block
CmaCh16G005980	Cucsa.106770	Cucumber (Gy14) v1	cgycmaB0245
CmaCh16G005980	Csa4G047960	Cucumber (Chinese Long) v2	cmacuB337
CmaCh16G005980	MELO3C016357	Melon (DHL92) v3.5.1	cmameB301
CmaCh16G005980	CSPI04G05750	Wild cucumber (PI 183967)	cmacpiB342
CmaCh16G005980	CmoCh04G007880	Cucurbita moschata (Rifu)	cmacmoB337
CmaCh16G005980	CmoCh16G006480	Cucurbita moschata (Rifu)	cmacmoB322
CmaCh16G005980	Lsi07G002770	Bottle gourd (USVL1VR-Ls)	cmalsiB326
CmaCh16G005980	Cp4.1LG14g02040	Cucurbita pepo (Zucchini)	cmacpeB344
CmaCh16G005980	Cp4.1LG01g00040	Cucurbita pepo (Zucchini)	cmacpeB350
CmaCh16G005980	MELO3C016357.2	Melon (DHL92) v3.6.1	cmamedB350
CmaCh16G005980	CsaV3_4G005910	Cucumber (Chinese Long) v3	cmacucB0393
CmaCh16G005980	Bhi01G001813	Wax gourd	cmawgoB0432
CmaCh16G005980	CsGy4G005620	Cucumber (Gy14) v2	cgybcmaB498
CmaCh16G005980	Carg22198	Silver-seed gourd	carcmaB0825

The following gene(s) are paralogous to this gene:


Gene	Paralogue	Organism	Block
CmaCh16G005980	CmaCh04G007400	Cucurbita maxima (Rimu)	cmacmaB350

The following block(s) are covering this gene:


Gene	Organism	Block
CmaCh16G005980	Cucumber (Chinese Long) v3	cmacucB0379
CmaCh16G005980	Cucumber (Chinese Long) v3	cmacucB0404
CmaCh16G005980	Cucumber (Chinese Long) v3	cmacucB0407
CmaCh16G005980	Watermelon (97103) v2	cmawmbB326
CmaCh16G005980	Watermelon (97103) v2	cmawmbB351
CmaCh16G005980	Watermelon (97103) v2	cmawmbB345
CmaCh16G005980	Cucurbita maxima (Rimu)	cmacmaB302
CmaCh16G005980	Cucumber (Gy14) v1	cgycmaB0831
CmaCh16G005980	Cucurbita moschata (Rifu)	cmacmoB320
CmaCh16G005980	Wild cucumber (PI 183967)	cmacpiB347
CmaCh16G005980	Cucumber (Chinese Long) v2	cmacuB343
CmaCh16G005980	Melon (DHL92) v3.5.1	cmameB284
CmaCh16G005980	Watermelon (Charleston Gray)	cmawcgB290
CmaCh16G005980	Watermelon (Charleston Gray)	cmawcgB301
CmaCh16G005980	Watermelon (97103) v1	cmawmB307
CmaCh16G005980	Watermelon (97103) v1	cmawmB319
CmaCh16G005980	Cucurbita pepo (Zucchini)	cmacpeB354
CmaCh16G005980	Bottle gourd (USVL1VR-Ls)	cmalsiB300
CmaCh16G005980	Bottle gourd (USVL1VR-Ls)	cmalsiB321
CmaCh16G005980	Cucumber (Gy14) v2	cgybcmaB338
CmaCh16G005980	Cucumber (Gy14) v2	cgybcmaB620
CmaCh16G005980	Melon (DHL92) v3.6.1	cmamedB328
CmaCh16G005980	Melon (DHL92) v3.6.1	cmamedB341
CmaCh16G005980	Silver-seed gourd	carcmaB1286