CmaCh16G005980 (gene) Cucurbita maxima (Rimu)

Overview
NameCmaCh16G005980
Typegene
OrganismCucurbita maxima (Cucurbita maxima (Rimu))
Descriptionoxidoreductases, acting on NADH or NADPH
LocationCma_Chr16 : 3090803 .. 3091726 (-)
Genome Viewer
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonfive_prime_UTRCDSthree_prime_UTR
Hold the cursor over a type above to highlight its positions in the sequence below.
CCATTTTCTTCCATCCCCTTTCTTCAACTCATCCATTCTCATTCAACCCCTTCCCATCCCTCTTTCACTTGCACTCTAATGGCGCCATCTTACGAAAAGCCCGCTCACTCCTCCGTCGACGACAACGAGAAGCATCGAGAATTCGGCGCCAAGGTCCAAGAAATGGCTTCCACCCTCACCAGTCGCTTGGGCATGATCCGAAAAGGAGGTAGCGTATTAAATCTTTTGTTTATTAAATCTAAATGAGTTGAATTATGTTTAAGTTTGAGCTCTTGTTATCAATAGGTACTGCTCACCACCATGAAGTCGTTGACGACCACGGCTCAAGTGTAATAACACTAGCTGGAACCAACACTGGTGCCACCATGCGTGCCGAGTTGAATGGTAAAGCCAAGAAGCTCGAGGATGCAGGCGTCGACAAGAACGAGCCCCTCACCTCCTACATTAACAGCAACTTCCAAGCCATCAACAACTCCATCATGTTCGGAGGTAGCTACACAGGCAATGACCCTGGAGTTCACATGAACATCACTGATCTTCATGAAGAAGGCCATAAGGCTGAGAAAGGAAGGGCTAAAAGCAAGAAGGTTGACAAGGAAAATGGCGAGTCCGGTGGCTCATTGCTTTCAAAGGAATGAGTTTTTTGGCGCACCATAAGTAATCATAATACATACATATATATATATATATATATATATTGTGCTATATAAGTACTAAAGATTCCAGAGGTTTGTATTACGAGTTTTTACGATTCTTGAAAGCTTAATAAACGGATCCACAATGTTCAAAACATGTATAGTATTATATATATAGCTAAACTCGAGGGGTTAAATTGAATTGTGAGTTACTTAAAATAATGAATTTTGGATGAAAGTTCGTGCTTATCTAATATGGTATTAGAGTCTGTTTTATGCTCGGTTAAAA

mRNA sequence

CCATTTTCTTCCATCCCCTTTCTTCAACTCATCCATTCTCATTCAACCCCTTCCCATCCCTCTTTCACTTGCACTCTAATGGCGCCATCTTACGAAAAGCCCGCTCACTCCTCCGTCGACGACAACGAGAAGCATCGAGAATTCGGCGCCAAGGTCCAAGAAATGGCTTCCACCCTCACCAGTCGCTTGGGCATGATCCGAAAAGGAGGTACTGCTCACCACCATGAAGTCGTTGACGACCACGGCTCAAGTGTAATAACACTAGCTGGAACCAACACTGGTGCCACCATGCGTGCCGAGTTGAATGGTAAAGCCAAGAAGCTCGAGGATGCAGGCGTCGACAAGAACGAGCCCCTCACCTCCTACATTAACAGCAACTTCCAAGCCATCAACAACTCCATCATGTTCGGAGGTAGCTACACAGGCAATGACCCTGGAGTTCACATGAACATCACTGATCTTCATGAAGAAGGCCATAAGGCTGAGAAAGGAAGGGCTAAAAGCAAGAAGGTTGACAAGGAAAATGGCGAGTCCGGTGGCTCATTGCTTTCAAAGGAATGAGTTTTTTGGCGCACCATAAGTAATCATAATACATACATATATATATATATATATATATATTGTGCTATATAAGTACTAAAGATTCCAGAGGTTTGTATTACGAGTTTTTACGATTCTTGAAAGCTTAATAAACGGATCCACAATGTTCAAAACATGTATAGTATTATATATATAGCTAAACTCGAGGGGTTAAATTGAATTGTGAGTTACTTAAAATAATGAATTTTGGATGAAAGTTCGTGCTTATCTAATATGGTATTAGAGTCTGTTTTATGCTCGGTTAAAA

Coding sequence (CDS)

ATGGCGCCATCTTACGAAAAGCCCGCTCACTCCTCCGTCGACGACAACGAGAAGCATCGAGAATTCGGCGCCAAGGTCCAAGAAATGGCTTCCACCCTCACCAGTCGCTTGGGCATGATCCGAAAAGGAGGTACTGCTCACCACCATGAAGTCGTTGACGACCACGGCTCAAGTGTAATAACACTAGCTGGAACCAACACTGGTGCCACCATGCGTGCCGAGTTGAATGGTAAAGCCAAGAAGCTCGAGGATGCAGGCGTCGACAAGAACGAGCCCCTCACCTCCTACATTAACAGCAACTTCCAAGCCATCAACAACTCCATCATGTTCGGAGGTAGCTACACAGGCAATGACCCTGGAGTTCACATGAACATCACTGATCTTCATGAAGAAGGCCATAAGGCTGAGAAAGGAAGGGCTAAAAGCAAGAAGGTTGACAAGGAAAATGGCGAGTCCGGTGGCTCATTGCTTTCAAAGGAATGA

Protein sequence

MAPSYEKPAHSSVDDNEKHREFGAKVQEMASTLTSRLGMIRKGGTAHHHEVVDDHGSSVITLAGTNTGATMRAELNGKAKKLEDAGVDKNEPLTSYINSNFQAINNSIMFGGSYTGNDPGVHMNITDLHEEGHKAEKGRAKSKKVDKENGESGGSLLSKE
Homology
[Close]
BLAST of CmaCh16G005980 vs. TrEMBL
Match: A0A0A0KUN4_CUCSA (Uncharacterized protein OS=Cucumis sativus GN=Csa_4G047960 PE=4 SV=1)

HSP 1 Score: 246.1 bits (627), Expect = 2.8e-62
Identity = 128/162 (79.01%), Postives = 140/162 (86.42%), Query Frame = 1 

Query: 1   MAPSYEKPAHSSVDDNEKHREFGAKVQEMASTLTSRLGMIRKGGTAHHHEVVDDHGSSVI 60
           MA SYEKPA+SS+DDNEKHREF   ++EM STLTSRLG++RKGG+A  HE+VDD GSS+I
Sbjct: 1   MARSYEKPAYSSIDDNEKHREFDRDIREMVSTLTSRLGLLRKGGSAQSHELVDDQGSSII 60

Query: 61  TLAGTNTGATMRAELNGKAKKL-EDAGVDKNEPLTSYINSNFQAINNSIMFGGSYTGNDP 120
           TLAGTNTGATMRAELNGK  KL +D GVD+NE LTSYINSNFQAINNSIMFGGSYTGNDP
Sbjct: 61  TLAGTNTGATMRAELNGKTTKLDQDTGVDENESLTSYINSNFQAINNSIMFGGSYTGNDP 120

Query: 121 GVHMNIT-DLHEEGHKAEKGRAKSKKVDKENGESGGSLLSKE 161
           GVHM  T DLHEEGHKAEKG AK KKV K+N ESGGS  SKE
Sbjct: 121 GVHMEYTSDLHEEGHKAEKGGAKGKKVGKDNAESGGSWFSKE 162

[Close]
BLAST of CmaCh16G005980 vs. TrEMBL
Match: B9RYY5_RICCO (Putative uncharacterized protein OS=Ricinus communis GN=RCOM_1314880 PE=4 SV=1)

HSP 1 Score: 134.8 bits (338), Expect = 9.2e-29
Identity = 74/153 (48.37%), Postives = 104/153 (67.97%), Query Frame = 1 

Query: 1   MAPSYEKPAHSSVDDNEKHREFGAKVQEMASTLTSRLGMIRKGGTAHHHEVV--DDHGSS 60
           ++ +  K   SS D N KH+ F  +V++M + +TSR+G + K G +HHH     D+HG  
Sbjct: 2   LSETTNKTTQSSSDAN-KHKPFDREVRDMVNAITSRVGDLHKPGASHHHRQTEEDEHGIR 61

Query: 61  VITLAGTNTGATMRAELNGKAKKLED-AGVDKNEPLTSYINSNFQAINNSIMFGGSYTGN 120
           +ITLAGTNTGATMR+EL+ K    +  +G D+ E L +Y+NSNFQA+NNSIMFG SY+ N
Sbjct: 62  IITLAGTNTGATMRSELDEKGTTPQGVSGDDQPEALGTYVNSNFQAVNNSIMFGSSYSTN 121

Query: 121 DPGVHMNITDLHEE--GHKAEKGRAKSKKVDKE 149
           DPGVH++I+D  E+  GHK ++   K KK + E
Sbjct: 122 DPGVHLDISDFFEQPHGHKPDRHARKGKKKETE 153

[Close]
BLAST of CmaCh16G005980 vs. TrEMBL
Match: A0A067LDW9_JATCU (Uncharacterized protein OS=Jatropha curcas GN=JCGZ_23625 PE=4 SV=1)

HSP 1 Score: 128.3 bits (321), Expect = 8.6e-27
Identity = 74/166 (44.58%), Postives = 105/166 (63.25%), Query Frame = 1 

Query: 1   MAPSYEKPAHSSVD-DNEKHREFGAKVQEMASTLTSRLGMIRKGGTAHHHEVV---DDHG 60
           M P   KP +SS   D +KH+    +V++M + +TSR+  ++K G +HHH+     D+HG
Sbjct: 1   MVPETAKPTYSSSSFDGDKHKALDREVRDMVNAITSRVSDLQKSGVSHHHQQQGEDDEHG 60

Query: 61  SSVITLAGTNTGATMRAELNGKAK-KLEDAGVDKNEPLTSYINSNFQAINNSIMFGGSYT 120
             +ITLAGTNTGATMR+EL+ K     +    D+ E L +Y+NSNFQAINNSIM GGSY 
Sbjct: 61  VRIITLAGTNTGATMRSELDDKPNYNPQGLSGDEPEALGTYVNSNFQAINNSIMIGGSYN 120

Query: 121 GNDPGVHMNITDLHE------EGHKAEKGRAKSKKVDKENGESGGS 156
            NDPGVH++I+D+ E      +   A KG+ K K+  K + ++  S
Sbjct: 121 TNDPGVHLDISDIFEHHAYRPDTKHARKGKRKEKEAVKSDQQTDHS 166

[Close]
BLAST of CmaCh16G005980 vs. TrEMBL
Match: A0A151S2G9_CAJCA (Uncharacterized protein OS=Cajanus cajan GN=KK1_029356 PE=4 SV=1)

HSP 1 Score: 127.1 bits (318), Expect = 1.9e-26
Identity = 69/151 (45.70%), Postives = 98/151 (64.90%), Query Frame = 1 

Query: 3   PSYEKPAHSSVDDNEKHREFGAKVQEMASTLTSRLGMIRKGGTAHHHEVVDDHGSSVITL 62
           PS  +P+HS   + EKH++   ++++M ST+T ++    K G+ HH    + HG S++ L
Sbjct: 2   PSPVQPSHSPSAEGEKHKQLDREIRDMVSTITHKVTDFHKPGSTHHLNNDEQHGLSMVAL 61

Query: 63  AGTNTGATMRAELNGKAKKLEDAGVDKNEPLTSYINSNFQAINNSIMFGGSYTGNDPGVH 122
            G N GATMR+EL+ K+        ++ E L++Y+NSNFQAINNSIMFGGSY  NDPGVH
Sbjct: 62  VGNNNGATMRSELDEKSGNPSHG--EEPEALSTYVNSNFQAINNSIMFGGSYQANDPGVH 121

Query: 123 MNITDL---HEEG--HKAEKGRAKSKKVDKE 149
           M+I+D    H +G  HK +K   K KK +KE
Sbjct: 122 MDISDFSTEHHQGHHHKEQKHGKKGKKKEKE 150

[Close]
BLAST of CmaCh16G005980 vs. TrEMBL
Match: A0A072VEM8_MEDTR (Uncharacterized protein OS=Medicago truncatula GN=MTR_2g016680 PE=4 SV=1)

HSP 1 Score: 123.6 bits (309), Expect = 2.1e-25
Identity = 71/150 (47.33%), Postives = 97/150 (64.67%), Query Frame = 1 

Query: 7   KPAHSSVDDNEKHREFGAKVQEMASTLTSRLGMIRKGGTAHHHEVVDDHGSSVITLAGTN 66
           K + S   + EKH+    +++EM S +T R+    K G++HH +  D+ G+ +ITLAG N
Sbjct: 7   KSSQSPPAEGEKHKNLDREIREMVSAITHRVTGFHKPGSSHHLDNEDEQGTRIITLAGNN 66

Query: 67  TGATMRAELNGKAKKLEDAGVDKNEPLTSYINSNFQAINNSIMFGGSYTGNDPGVHMNIT 126
            GAT+R+EL+ K+ K      D+ E L++Y+NSNFQAINNSIM GGSY  NDPGVHM+I+
Sbjct: 67  EGATLRSELDAKSGKYSSH--DEAEALSTYVNSNFQAINNSIMLGGSYHANDPGVHMDIS 126

Query: 127 DLHE---EGHKAEKGRAKSKKVDKENGESG 154
           D  E      KAEK   K KK DK+ G+ G
Sbjct: 127 DFTEPPQNQQKAEKHGKKEKK-DKKKGKEG 153

[Close]
BLAST of CmaCh16G005980 vs. TAIR10
Match: AT1G63310.1 (AT1G63310.1 unknown protein)

HSP 1 Score: 80.5 bits (197), Expect = 1.0e-15
Identity = 52/134 (38.81%), Postives = 80/134 (59.70%), Query Frame = 1 

Query: 15  DNEKHRE---FGAKVQEMASTLTSRLGMIRKGGTAHHHEVVDDHGSSVITLAGTNTGATM 74
           + EKHR    F  +++ M S+LT   G   K G + + E  ++ G  VITL+G+N GATM
Sbjct: 9   ETEKHRRQQHFEHELKNMISSLTHMGG--DKAGPSQYDE--EEDGIRVITLSGSNLGATM 68

Query: 75  RAELNGKAKKLEDAGVDKNEPLTSYINSNFQAINNSIMFGGSYTGNDPGVHMNIT-DLHE 134
           + EL+      +  G  + + L++Y+NSNFQA+NNSIM G  Y  +DPGVH++I+ D+ +
Sbjct: 69  KTELDNNHGDRDQNGDHELDFLSTYVNSNFQAVNNSIMIGAKYETHDPGVHLDISGDVEK 128

Query: 135 EGHKAEKGRAKSKK 145
              K     ++ KK
Sbjct: 129 PSVKIPARSSRGKK 138

[Close]
BLAST of CmaCh16G005980 vs. NCBI nr
Match: gi|449457570|ref|XP_004146521.1| (PREDICTED: uncharacterized protein LOC101210126 [Cucumis sativus])

HSP 1 Score: 246.1 bits (627), Expect = 4.1e-62
Identity = 128/162 (79.01%), Postives = 140/162 (86.42%), Query Frame = 1 

Query: 1   MAPSYEKPAHSSVDDNEKHREFGAKVQEMASTLTSRLGMIRKGGTAHHHEVVDDHGSSVI 60
           MA SYEKPA+SS+DDNEKHREF   ++EM STLTSRLG++RKGG+A  HE+VDD GSS+I
Sbjct: 1   MARSYEKPAYSSIDDNEKHREFDRDIREMVSTLTSRLGLLRKGGSAQSHELVDDQGSSII 60

Query: 61  TLAGTNTGATMRAELNGKAKKL-EDAGVDKNEPLTSYINSNFQAINNSIMFGGSYTGNDP 120
           TLAGTNTGATMRAELNGK  KL +D GVD+NE LTSYINSNFQAINNSIMFGGSYTGNDP
Sbjct: 61  TLAGTNTGATMRAELNGKTTKLDQDTGVDENESLTSYINSNFQAINNSIMFGGSYTGNDP 120

Query: 121 GVHMNIT-DLHEEGHKAEKGRAKSKKVDKENGESGGSLLSKE 161
           GVHM  T DLHEEGHKAEKG AK KKV K+N ESGGS  SKE
Sbjct: 121 GVHMEYTSDLHEEGHKAEKGGAKGKKVGKDNAESGGSWFSKE 162

[Close]
BLAST of CmaCh16G005980 vs. NCBI nr
Match: gi|659102266|ref|XP_008452038.1| (PREDICTED: uncharacterized protein LOC103493165 isoform X2 [Cucumis melo])

HSP 1 Score: 242.7 bits (618), Expect = 4.5e-61
Identity = 127/163 (77.91%), Postives = 140/163 (85.89%), Query Frame = 1 

Query: 1   MAPSYEKPAHSSVDDNEKHREFGAKVQEMASTLTSRLGMIRKGGTAHHHEVVDDHGSSVI 60
           MA SYEKPA+SS+DDNEKHREF   ++EM STLTSRLG++RKGGTA +HE+VDD GSSVI
Sbjct: 1   MARSYEKPAYSSIDDNEKHREFDRDIREMVSTLTSRLGLLRKGGTAQNHELVDDQGSSVI 60

Query: 61  TLAGTNTGATMRAELNGK--AKKLEDAGVDKNEPLTSYINSNFQAINNSIMFGGSYTGND 120
           TLAGTNTGATMRAELNGK   K  +D GVD++E LTSYINSNFQAINNSIMFGGSYTGND
Sbjct: 61  TLAGTNTGATMRAELNGKTMTKLDQDTGVDESESLTSYINSNFQAINNSIMFGGSYTGND 120

Query: 121 PGVHMNIT-DLHEEGHKAEKGRAKSKKVDKENGESGGSLLSKE 161
           PGVHM  T DLHEEGHKAEKG AK KK+ K+N ESGGS  SKE
Sbjct: 121 PGVHMEYTSDLHEEGHKAEKGGAKGKKIGKDNAESGGSWFSKE 163

[Close]
BLAST of CmaCh16G005980 vs. NCBI nr
Match: gi|659102264|ref|XP_008452037.1| (PREDICTED: uncharacterized protein LOC103493165 isoform X1 [Cucumis melo])

HSP 1 Score: 236.5 bits (602), Expect = 3.2e-59
Identity = 126/164 (76.83%), Postives = 140/164 (85.37%), Query Frame = 1 

Query: 1   MAPSYEKPAHSSVDDNEKHREFGAKVQEMASTLTSRLGMIRKGGTA-HHHEVVDDHGSSV 60
           MA SYEKPA+SS+DDNEKHREF   ++EM STLTSRLG++RKGG+A  +HE+VDD GSSV
Sbjct: 1   MARSYEKPAYSSIDDNEKHREFDRDIREMVSTLTSRLGLLRKGGSAAQNHELVDDQGSSV 60

Query: 61  ITLAGTNTGATMRAELNGKA--KKLEDAGVDKNEPLTSYINSNFQAINNSIMFGGSYTGN 120
           ITLAGTNTGATMRAELNGK   K  +D GVD++E LTSYINSNFQAINNSIMFGGSYTGN
Sbjct: 61  ITLAGTNTGATMRAELNGKTMTKLDQDTGVDESESLTSYINSNFQAINNSIMFGGSYTGN 120

Query: 121 DPGVHMNIT-DLHEEGHKAEKGRAKSKKVDKENGESGGSLLSKE 161
           DPGVHM  T DLHEEGHKAEKG AK KK+ K+N ESGGS  SKE
Sbjct: 121 DPGVHMEYTSDLHEEGHKAEKGGAKGKKIGKDNAESGGSWFSKE 164

[Close]
BLAST of CmaCh16G005980 vs. NCBI nr
Match: gi|255555837|ref|XP_002518954.1| (PREDICTED: uncharacterized protein LOC8278482 [Ricinus communis])

HSP 1 Score: 134.8 bits (338), Expect = 1.3e-28
Identity = 74/153 (48.37%), Postives = 104/153 (67.97%), Query Frame = 1 

Query: 1   MAPSYEKPAHSSVDDNEKHREFGAKVQEMASTLTSRLGMIRKGGTAHHHEVV--DDHGSS 60
           ++ +  K   SS D N KH+ F  +V++M + +TSR+G + K G +HHH     D+HG  
Sbjct: 2   LSETTNKTTQSSSDAN-KHKPFDREVRDMVNAITSRVGDLHKPGASHHHRQTEEDEHGIR 61

Query: 61  VITLAGTNTGATMRAELNGKAKKLED-AGVDKNEPLTSYINSNFQAINNSIMFGGSYTGN 120
           +ITLAGTNTGATMR+EL+ K    +  +G D+ E L +Y+NSNFQA+NNSIMFG SY+ N
Sbjct: 62  IITLAGTNTGATMRSELDEKGTTPQGVSGDDQPEALGTYVNSNFQAVNNSIMFGSSYSTN 121

Query: 121 DPGVHMNITDLHEE--GHKAEKGRAKSKKVDKE 149
           DPGVH++I+D  E+  GHK ++   K KK + E
Sbjct: 122 DPGVHLDISDFFEQPHGHKPDRHARKGKKKETE 153

[Close]
BLAST of CmaCh16G005980 vs. NCBI nr
Match: gi|802562577|ref|XP_012066443.1| (PREDICTED: uncharacterized protein LOC105629456 [Jatropha curcas])

HSP 1 Score: 128.3 bits (321), Expect = 1.2e-26
Identity = 74/166 (44.58%), Postives = 105/166 (63.25%), Query Frame = 1 

Query: 1   MAPSYEKPAHSSVD-DNEKHREFGAKVQEMASTLTSRLGMIRKGGTAHHHEVV---DDHG 60
           M P   KP +SS   D +KH+    +V++M + +TSR+  ++K G +HHH+     D+HG
Sbjct: 1   MVPETAKPTYSSSSFDGDKHKALDREVRDMVNAITSRVSDLQKSGVSHHHQQQGEDDEHG 60

Query: 61  SSVITLAGTNTGATMRAELNGKAK-KLEDAGVDKNEPLTSYINSNFQAINNSIMFGGSYT 120
             +ITLAGTNTGATMR+EL+ K     +    D+ E L +Y+NSNFQAINNSIM GGSY 
Sbjct: 61  VRIITLAGTNTGATMRSELDDKPNYNPQGLSGDEPEALGTYVNSNFQAINNSIMIGGSYN 120

Query: 121 GNDPGVHMNITDLHE------EGHKAEKGRAKSKKVDKENGESGGS 156
            NDPGVH++I+D+ E      +   A KG+ K K+  K + ++  S
Sbjct: 121 TNDPGVHLDISDIFEHHAYRPDTKHARKGKRKEKEAVKSDQQTDHS 166

The following BLAST results are available for this feature:
BLAST of CmaCh16G005980 vs. Swiss-Prot
Match NameE-valueIdentityDescription
BLAST of CmaCh16G005980 vs. TrEMBL
Match NameE-valueIdentityDescription
A0A0A0KUN4_CUCSA2.8e-6279.01Uncharacterized protein OS=Cucumis sativus GN=Csa_4G047960 PE=4 SV=1[more]
B9RYY5_RICCO9.2e-2948.37Putative uncharacterized protein OS=Ricinus communis GN=RCOM_1314880 PE=4 SV=1[more]
A0A067LDW9_JATCU8.6e-2744.58Uncharacterized protein OS=Jatropha curcas GN=JCGZ_23625 PE=4 SV=1[more]
A0A151S2G9_CAJCA1.9e-2645.70Uncharacterized protein OS=Cajanus cajan GN=KK1_029356 PE=4 SV=1[more]
A0A072VEM8_MEDTR2.1e-2547.33Uncharacterized protein OS=Medicago truncatula GN=MTR_2g016680 PE=4 SV=1[more]
BLAST of CmaCh16G005980 vs. TAIR10
Match NameE-valueIdentityDescription
AT1G63310.11.0e-1538.81 unknown protein[more]
BLAST of CmaCh16G005980 vs. NCBI nr
Match NameE-valueIdentityDescription
gi|449457570|ref|XP_004146521.1|4.1e-6279.01PREDICTED: uncharacterized protein LOC101210126 [Cucumis sativus][more]
gi|659102266|ref|XP_008452038.1|4.5e-6177.91PREDICTED: uncharacterized protein LOC103493165 isoform X2 [Cucumis melo][more]
gi|659102264|ref|XP_008452037.1|3.2e-5976.83PREDICTED: uncharacterized protein LOC103493165 isoform X1 [Cucumis melo][more]
gi|255555837|ref|XP_002518954.1|1.3e-2848.37PREDICTED: uncharacterized protein LOC8278482 [Ricinus communis][more]
gi|802562577|ref|XP_012066443.1|1.2e-2644.58PREDICTED: uncharacterized protein LOC105629456 [Jatropha curcas][more]
Annotated Terms
The following terms have been associated with this gene:
Vocabulary: INTERPRO
TermDefinition
GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
Category Term Accession Term Name
biological_process GO:0008150 biological_process
cellular_component GO:0005575 cellular_component
molecular_function GO:0003674 molecular_function
Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
CmaCh16G005980.1CmaCh16G005980.1mRNA


InterPro
Analysis Name: InterPro Annotations of Cucurbita maxima
Date Performed: 2017-05-20
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availablePANTHERPTHR33472FAMILY NOT NAMEDcoord: 4..131
score: 5.5

Synteny
The following gene(s) are orthologous to this gene:
GeneOrthologueOrganismBlock
CmaCh16G005980Cucsa.106770Cucumber (Gy14) v1cgycmaB0245
CmaCh16G005980Csa4G047960Cucumber (Chinese Long) v2cmacuB337
CmaCh16G005980MELO3C016357Melon (DHL92) v3.5.1cmameB301
CmaCh16G005980CSPI04G05750Wild cucumber (PI 183967)cmacpiB342
CmaCh16G005980CmoCh04G007880Cucurbita moschata (Rifu)cmacmoB337
CmaCh16G005980CmoCh16G006480Cucurbita moschata (Rifu)cmacmoB322
CmaCh16G005980Lsi07G002770Bottle gourd (USVL1VR-Ls)cmalsiB326
CmaCh16G005980Cp4.1LG14g02040Cucurbita pepo (Zucchini)cmacpeB344
CmaCh16G005980Cp4.1LG01g00040Cucurbita pepo (Zucchini)cmacpeB350
CmaCh16G005980MELO3C016357.2Melon (DHL92) v3.6.1cmamedB350
CmaCh16G005980CsaV3_4G005910Cucumber (Chinese Long) v3cmacucB0393
CmaCh16G005980Bhi01G001813Wax gourdcmawgoB0432
CmaCh16G005980CsGy4G005620Cucumber (Gy14) v2cgybcmaB498
CmaCh16G005980Carg22198Silver-seed gourdcarcmaB0825
The following gene(s) are paralogous to this gene:
GeneParalogueOrganismBlock
CmaCh16G005980CmaCh04G007400Cucurbita maxima (Rimu)cmacmaB350
The following block(s) are covering this gene:
GeneOrganismBlock
CmaCh16G005980Cucurbita moschata (Rifu)cmacmoB320
CmaCh16G005980Wild cucumber (PI 183967)cmacpiB347
CmaCh16G005980Cucumber (Chinese Long) v2cmacuB343
CmaCh16G005980Melon (DHL92) v3.5.1cmameB284
CmaCh16G005980Watermelon (Charleston Gray)cmawcgB290
CmaCh16G005980Watermelon (Charleston Gray)cmawcgB301
CmaCh16G005980Watermelon (97103) v1cmawmB307
CmaCh16G005980Watermelon (97103) v1cmawmB319
CmaCh16G005980Cucurbita pepo (Zucchini)cmacpeB354
CmaCh16G005980Bottle gourd (USVL1VR-Ls)cmalsiB300
CmaCh16G005980Bottle gourd (USVL1VR-Ls)cmalsiB321
CmaCh16G005980Cucumber (Gy14) v2cgybcmaB338
CmaCh16G005980Cucumber (Gy14) v2cgybcmaB620
CmaCh16G005980Melon (DHL92) v3.6.1cmamedB328
CmaCh16G005980Melon (DHL92) v3.6.1cmamedB341
CmaCh16G005980Silver-seed gourdcarcmaB1286
CmaCh16G005980Cucumber (Chinese Long) v3cmacucB0379
CmaCh16G005980Cucumber (Chinese Long) v3cmacucB0404
CmaCh16G005980Cucumber (Chinese Long) v3cmacucB0407
CmaCh16G005980Watermelon (97103) v2cmawmbB326
CmaCh16G005980Watermelon (97103) v2cmawmbB351
CmaCh16G005980Watermelon (97103) v2cmawmbB345
CmaCh16G005980Cucurbita maxima (Rimu)cmacmaB302
CmaCh16G005980Cucumber (Gy14) v1cgycmaB0831