CsGy3G020160 (gene) Cucumber (Gy14) v2

Overview
NameCsGy3G020160
Typegene
OrganismCucumis sativus (Cucumber (Gy14) v2)
DescriptionUncharacterized protein
LocationChr3 : 16672614 .. 16676464 (+)
Genome Viewer
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
ATGATTACACTTGTCCTCCTTCTTCGACTAGCAAAGAGCACTCCAATGGGACGAAGTCCTTTGCCTTTCTCCAGAATCCAAACTTCTAACCCCACTCCAATGCGACGAAGTCCTTTGTTGCCTGGCCATTTACCACAATCCCTCATTGTCAACATAGATTTTGAGCGTCCTCACCTAAATGTTCCAGTAATTACCCTATCTGAAGGTGATGCTGCAACAGAGGATGTCCAAGATTATGGAACGCTGCATGATACTGCACCCCATGATGAGACTTTGCCAGACTCGAGAACTTCATTGATCGTTTATGACCCACTCTTCTACAACATACTTATGAGAGAAGACACAGGTGAGATGAGCTCAGCAAGAACAACTTAACTTGAAGTCAGAGACCAAGAAAAAAATGATGAAAGACTTTTCGATATATTAACTAATGTCATCATAAAGCCCATACAAGCGGCCTTTGACAATGTGTTGGAAGAGAATCTGGCATTGAAACAAACATATCGATTATCATACCCCACCCCAAGCATTTGCTTGCTTGACTCGAGATGCGGCGTGATGTCAGCTGAAGCTATTCACCTCTAAAACAACCTCAACTGACCCTTGACATAAAATCATGAAACATTCAACAGTGGAAGTCTTTAAACTTTGAAATACTTTAAAATCATAGTGTAACCTGTTTGAAATGCCTTTTATAAATGTCTAAAACATGAAGATATAAACTTTTAATAAATGCAGTAATACTTTTAACAAATCTATTCTTCCCATGATTGAAAATTTGATTGGCCTTGCAACAATAAGTTCATTACGCGGAGAGTTAGTATCTGTACCCAGAAAGAGGGAAAACATTTTGAAAGGGTAAGTCGAAAGACTTAGTGAGCAACAGTTTTAAAAAACAAGTTTTCATAAACAATTTAATATAAAACTAAAGCTTCAAATACATTTGTCAATAAACAATCATTTCAAAACATGTTACTTGAAACATTTGCATAGCTTTTCAAAGACAATGTTTCATAGCCACATGCAAAATTAAACCTCTTCATTCGAAGACGGAACAATCGAGTGGAAATAATTTTCACTGTAATCCTTCTCCTTTAAGGCATAAATACATACCTTTCCTGATGGCCCATAAACTATAGGCTTGTCAACCTTACTATTAGTTTGAAGTTAACCACATGTATACAATATGTCTCACGGAATATTCGAGCTAGGAGAAAACATTTGAAAACTTTGAAATATTTTCCAAGCCTTGATAATGAAATCATTCAAACACGGTATAACTTAAACATCAATTCATAAACATTTATCATGAATCATAACTTGAAAATCATGCTTTATAAATCATTTCACAAGCTATTGCTTGTGTAGCTTGAAACCATACTTAATAAATACTTTAGAAATCATTGTGTTACTCATTGCACTTGAATAGAGCTTTAATTTTGAGATTCCTCTGAAGCTTCCTTGATCTAACAAATTCATATTTTATCCTTCATTAATCCCTTGAACATGAAATATCCAAAATTTCCCTTAAATTTTCCCAAAATATCATAATAGCCCAAAACAACTCAATAACCCAACGGTGCCCATTGACATGGTTGTTGGGGCCAGCCACACATGTTCTAGGATCTTGTCGCATGCTAACCTCATTGAGGTGGGCCGTGCATTGTGTGCTAACCTCACAGTGAGGGATGCTGCACCCTGTGCACTAACCTCTTAACGCAAGGTCATGTGCGCAGCCTGAGCACATCCCTTGCGACTTGGCTGTGCCATGACCTTATCATGTGCATAAAAAATAGCCCAGAATAACCTCTAAGAACTAAAAGCACTCCCATAAACTCTAACATGCATCATACTGACCTACTGCCCATAACATCAATTTTCGTATAGAATACATGATACAACTTTGAAAAATCATAAAAATTCATAATTTTTTTTACAACACTTCATTTTTCAAGGTTTCTCTAAAATATCTTACTTTTGTTACCTCAAAATTTCAGAGAAAAACTCCAAAAGGCAGGCTTTGGAGCCCTCTGGGAAAGCATATTGCTCAGATTTTTCTTGAAAATGACATTCACACCTTTTTTGAACCAAAACACAAACCTTCTCACATCCAAATTGAGCAGTAACCCTCCTTAACAGTTGGAACCAAATTTGTTTTTTATCTTTTAAAACTAATTTGAGTGAATTTGCACGAGTGAGTTTTGAGAAACCTTTGATTGAAGGTCTCTATTTTATAGGGAGCCTTGCATGAAAATGAGTTGACACCTGATCTTTGATTAGACTCAGATCTTAAGCTCCTAATTACACCTCCTACTTGTCCTTCACACCGTCCTTGGCCGCAAAATGCATGAACTAGATTAAGACACTTGGATTTCACTTAAAATGATTGTTATAATCATGCCACATAATTGGCCTAATCTCATGGCTAACCTCCAATGCCCTCTCGCATTGCTTGGCAGCCTAACCTCTCAACACATAGTCCTTGGTCGCCTTGCTAACTTTTCAATGCATAGTCCTTTTTGTATAGTCTTGTCGACCAATGACAAGCTCTAGTTTGCATGTTAACCTCTAAAGCCATCTTGCAAAGCCTTGCTTCTCGTCGATGGCCTTCTCACAAAACCTCTCAAAGATAGCCTTCCTCATTGAAACTAACCTCTCAAGCCTTCTTGCCTAGCCATCAAAATGTCTAGACATCCCTTTAGAGGTTAGTTTTCATTATTTTGGCCTCTTAGTTCATGTCAAAACACCTAAGCTTGGAGGTTATTGAGCTTCATCTCGTCGCCCAACAAACATAATTTAGTTTGTCACCCAACAAACGCTCTAAACGCCCAATGTGTTTTTCTTTGACACTTACGCAAATTTTTCAAAATTTCCTAACTTTGACTTAACCATAAAATCTTTATGTATCTTCTAAGAATTTTTACCTTCTTTTTCTGACATCTTCCCTTTTCTCTTGTTTTTCACTAATCTTAACAAGTTCCAAATGTCTAAGAATTTTGGGGTTTCACATCGATAGCCTCGACACAACTGTAAAGGGGTTAAATGCCAAATTAAATGGGTTGGAAATGATAGTCTCTCAACTTCGTTCTTCTTTTTTGCAGGTTTCCTCAGCACTACAACACCTCACAGGTTTGATAGTTGCACATTTAAAGAATTGTTTACTCTCGAGCAACACTTAGATAGGATTTTCTCCTTTTAGATAGGATTAGAGCTTAAACACGACATATCCATGAGCAATTGTATGCACATAATGAAACAAGCAACTAGCATTGACGCTGACATGCTCAAAGGATAAGGACGAGTTGCGTAGCAGGGTATGAACATTTCCCACCTAAGCATGCTTATAAATACCCTTGAACTGCACTAGACATAGAGTAAGAGAAAAAATAGATACAACAAGTGCCCACACTCTGTAGAAGTTTATCCTTTCCCACCTCTTCTCTGATCAAATCTAAGTGAGAGCTTAGAGAAAGGTTAGAGAGAGAAGCCCAAAACCCATTCCCATAACTTGTAAAAGAGCCAAGGAATGCATAACAATGCATTTTACGACTTGACACCATTTCTTCATTTCTCAGTTTTTACCTTTGTGTATTGTTTGAAGTGGATGAATTTCATGGCCAAGAGGCCTATATTATTTATCAATACAATTCATGTTTAGTATCTTTATCATTCTCTTATGTCTTTACTCTACATACTCTTATCTTTGTGTTATAAATGATTTGAGTCTTTATGTTGTGTCATCAAAAGGTTTTACATATATAAAGATTACAACATTTAGTCTGAGCCTAATCCAAATGTCTAATTATACTATATATATATATATATATATATAAAGAATCAAGCAACGGTAG

mRNA sequence

ATGATTACACTTGTCCTCCTTCTTCGACTAGCAAAGAGCACTCCAATGGGACGAAGTCCTTTGCCTTTCTCCAGAATCCAAACTTCTAACCCCACTCCAATGCGACGAAGTCCTTTGTTGCCTGGCCATTTACCACAATCCCTCATTGTCAACATAGATTTTGAGCGTCCTCACCTAAATGTTCCAGTAATTACCCTATCTGAAGGTGATGCTGCAACAGAGGATGTCCAAGATTATGGAACGCTGCATGATACTGCACCCCATGATGAGACTTTGCCAGACTCGAGAACTTCATTGATCGTTTATGACCCACTCTTCTACAACATACTTATGAGAGAAGACACAGGTTTCCTCAGCACTACAACACCTCACAGAATCAAGCAACGGTAG

Coding sequence (CDS)

ATGATTACACTTGTCCTCCTTCTTCGACTAGCAAAGAGCACTCCAATGGGACGAAGTCCTTTGCCTTTCTCCAGAATCCAAACTTCTAACCCCACTCCAATGCGACGAAGTCCTTTGTTGCCTGGCCATTTACCACAATCCCTCATTGTCAACATAGATTTTGAGCGTCCTCACCTAAATGTTCCAGTAATTACCCTATCTGAAGGTGATGCTGCAACAGAGGATGTCCAAGATTATGGAACGCTGCATGATACTGCACCCCATGATGAGACTTTGCCAGACTCGAGAACTTCATTGATCGTTTATGACCCACTCTTCTACAACATACTTATGAGAGAAGACACAGGTTTCCTCAGCACTACAACACCTCACAGAATCAAGCAACGGTAG

Protein sequence

MITLVLLLRLAKSTPMGRSPLPFSRIQTSNPTPMRRSPLLPGHLPQSLIVNIDFERPHLNVPVITLSEGDAATEDVQDYGTLHDTAPHDETLPDSRTSLIVYDPLFYNILMREDTGFLSTTTPHRIKQR
Homology
[Close]
BLAST of CsGy3G020160 vs. NCBI nr
Match: KGN57725.1 (hypothetical protein Csa_3G263230 [Cucumis sativus])

HSP 1 Score: 234.2 bits (596), Expect = 2.5e-58
Identity = 117/120 (97.50%), Postives = 119/120 (99.17%), Query Frame = 0 

Query: 1   MITLVLLLRLAKSTPMGRSPLPFSRIQTSNPTPMRRSPLLPGHLPQSLIVNIDFERPHLN 60
           MITLVLLLRLAKSTPMGRSPLPFSRIQTSNPTPMRRSPLLPGHLPQSLIVNIDFERPHLN
Sbjct: 1   MITLVLLLRLAKSTPMGRSPLPFSRIQTSNPTPMRRSPLLPGHLPQSLIVNIDFERPHLN 60

Query: 61  VPVITLSEGDAATEDVQDYGTLHDTAPHDETLPDSRTSLIVYDPLFYNILMREDTGFLST 120
           VPVITLSEGDAATEDVQDYGTLHDTAPHDETLPDSRTSLIVYDPLFYNILMREDTG +S+
Sbjct: 61  VPVITLSEGDAATEDVQDYGTLHDTAPHDETLPDSRTSLIVYDPLFYNILMREDTGEMSS 120

[Close]
BLAST of CsGy3G020160 vs. TrEMBL
Match: tr|A0A0A0L6W4|A0A0A0L6W4_CUCSA (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_3G263230 PE=4 SV=1)

HSP 1 Score: 234.2 bits (596), Expect = 1.7e-58
Identity = 117/120 (97.50%), Postives = 119/120 (99.17%), Query Frame = 0 

Query: 1   MITLVLLLRLAKSTPMGRSPLPFSRIQTSNPTPMRRSPLLPGHLPQSLIVNIDFERPHLN 60
           MITLVLLLRLAKSTPMGRSPLPFSRIQTSNPTPMRRSPLLPGHLPQSLIVNIDFERPHLN
Sbjct: 1   MITLVLLLRLAKSTPMGRSPLPFSRIQTSNPTPMRRSPLLPGHLPQSLIVNIDFERPHLN 60

Query: 61  VPVITLSEGDAATEDVQDYGTLHDTAPHDETLPDSRTSLIVYDPLFYNILMREDTGFLST 120
           VPVITLSEGDAATEDVQDYGTLHDTAPHDETLPDSRTSLIVYDPLFYNILMREDTG +S+
Sbjct: 61  VPVITLSEGDAATEDVQDYGTLHDTAPHDETLPDSRTSLIVYDPLFYNILMREDTGEMSS 120

The following BLAST results are available for this feature:
BLAST of CsGy3G020160 vs. NCBI nr
Match NameE-valueIdentityDescription
KGN57725.12.5e-5897.50hypothetical protein Csa_3G263230 [Cucumis sativus][more]
BLAST of CsGy3G020160 vs. TAIR10
Match NameE-valueIdentityDescription
BLAST of CsGy3G020160 vs. Swiss-Prot
Match NameE-valueIdentityDescription
BLAST of CsGy3G020160 vs. TrEMBL
Match NameE-valueIdentityDescription
tr|A0A0A0L6W4|A0A0A0L6W4_CUCSA1.7e-5897.50Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_3G263230 PE=4 SV=1[more]
GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
Category Term Accession Term Name
biological_process GO:0008150 biological_process
cellular_component GO:0005575 cellular_component
molecular_function GO:0003674 molecular_function
Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
CsGy3G020160.1CsGy3G020160.1mRNA


Synteny
The following gene(s) are orthologous to this gene:
GeneOrthologueOrganismBlock
CsGy3G020160Csa3G263230Cucumber (Chinese Long) v2cgybcuB109
CsGy3G020160CSPI03G20440Wild cucumber (PI 183967)cgybcpiB110
CsGy3G020160CsaV3_3G020380Cucumber (Chinese Long) v3cgybcucB117
The following gene(s) are paralogous to this gene:

None

The following block(s) are covering this gene:
GeneOrganismBlock
CsGy3G020160Cucurbita maxima (Rimu)cgybcmaB308
CsGy3G020160Cucurbita maxima (Rimu)cgybcmaB368
CsGy3G020160Cucurbita moschata (Rifu)cgybcmoB281
CsGy3G020160Cucurbita moschata (Rifu)cgybcmoB339
CsGy3G020160Cucurbita pepo (Zucchini)cgybcpeB380
CsGy3G020160Cucurbita pepo (Zucchini)cgybcpeB397
CsGy3G020160Bottle gourd (USVL1VR-Ls)cgyblsiB199
CsGy3G020160Melon (DHL92) v3.5.1cgybmeB212
CsGy3G020160Melon (DHL92) v3.6.1cgybmedB206
CsGy3G020160Watermelon (Charleston Gray)cgybwcgB217
CsGy3G020160Watermelon (97103) v1cgybwmB233
CsGy3G020160Silver-seed gourdcarcgybB0489
CsGy3G020160Silver-seed gourdcarcgybB0757
CsGy3G020160Watermelon (97103) v2cgybwmbB209
CsGy3G020160Wax gourdcgybwgoB259