CsGy3G019530 (gene) Cucumber (Gy14) v2
The following sequences are available for this feature:
Legend: CDSexon Hold the cursor over a type above to highlight its positions in the sequence below.ATGGCTGCTTTTGCCTCACTACCCCTAACTTCATCTTCTTTACATCCAGTTGTCCAATTCTCACCTCTTGTATTCTCCTCAAAAGTTGTATATGACCCAAGTTCCTATTGCTTCACAGTCAGATCAATCAGATATGGAAACCAAAAATTTTCCTCTCAGTCCAACCCAAGGAGTTTGATAATTCTTGGGGCAGCAACAAAACAAGCAAAAACACCAGGTATTCTCTTCTCGTTAATCTAATATTTTAACAGGTTTCAGGTAGAAATTTCAATCTTTTTAGTTTTAATTTATTAATACAAAGCTGGGTTTATTCTCGTCTATTTGGAGAATTCAGCTGAAGAGGATTGGAAGGTGAAGAGGGAACTTCTGCTGCAGAAAAGGGTCTGACTCTCTACCTACAACTTCAGTGTATATTGGATGAGTGGTCAGTTTTATTAATCTAAAACTACAGGCAAACACATCGCACTTGTTTTCGTCATAAAATGCATCCAAAGTATATCGGAAAGGTTAAATTTTGGTCCATAACAAAGGCTGGAGTTTTGTGAAATGAAGTTCTAAAACTTAAAAGCATAATGAGTAGGAATTGGTTTTAGTTCAAAACAAGTAATGATGCTGAACAGAACATGAGAATTAAGACTCTCACCCTTGAGATCTTCACTGCAGGTAAGGAGTGTGGATGCTAATGAAGCTCTGCGCCTTCAAAAGGAAAACAACTTTGTGATTCTTGATGTCAGGCCAGAAGCAGAATTCAAAGAGGTTAGTGGATTAATGTGTGATGATTTGCATTTTTCGTCCAGACCCGAACAACCAATGATTTGGACTAAGCTCACTCTGGTGGACAATCAATGAATTTTTATATCTTATTTCAAGTGTTTTGGTATAGGGCCATCCACCAGGTGCCATTAATGTGCAAATCTACAGGCTTATAAAGGAGTGGACAGCATGGGACATAGCCAGGAGAGCTGCATTTGCATTTTTTGGCATCTTTTCGGGTACCGAAGAAAACCCAGAGTTCTTGCAAAGTAAGTTACTTGTGAACACCTTCTTCACTTCACTTCTTGTTCTCGAAAGTGAATGCCTGATTATCTTCCTATTTCTACAGGTGTAGAATCTAAAATTGATAAAGATGCCAAAATAATAGTAGCATGCTCATCAGGTGGAACAATGAAACCTACCCAGAATCTTCCAGAAGGTCAACAATCAAGGTACTCAAACTTTTGACAGTAACCTATATGTTTATTACATGCCCCTGACATTCTACAAATATCCCTCTTCATACGGTCAACGGGTAGAACGATTAAAACAAGTTTAAGAATATGAAGAATCAGTAAGCAAGATGAATTTGCTATCAACCATTGTCTCTTCAACTTCTCCATTATTGTCCTCAGTTATGTGATTTGTGTCCAAAATCACATAGTACCTTCTATTTCTTGTTTGAGGTTTAGCTGTTTATTCTCTGCTACAGAGAAAAATGCTAAGCATCAAGTTTTAACTTTGGCCACATTTAACAGGTCACTGATAGCAGCCTACTTGTTGGTTCTCAATGGGTACGCCAACGTATTTCACTTAGAAGGTGGTCTCTACAATTGGTTCAAAGAAGGATTGCCTGTAGTTTCAGAAGAATAA ATGGCTGCTTTTGCCTCACTACCCCTAACTTCATCTTCTTTACATCCAGTTGTCCAATTCTCACCTCTTGTATTCTCCTCAAAAGTTGTATATGACCCAAGTTCCTATTGCTTCACAGTCAGATCAATCAGATATGGAAACCAAAAATTTTCCTCTCAGTCCAACCCAAGGAGTTTGATAATTCTTGGGGCAGCAACAAAACAAGCAAAAACACCAGCTGAAGAGGATTGGAAGGTGAAGAGGGAACTTCTGCTGCAGAAAAGGGTAAGGAGTGTGGATGCTAATGAAGCTCTGCGCCTTCAAAAGGAAAACAACTTTGTGATTCTTGATGTCAGGCCAGAAGCAGAATTCAAAGAGGGCCATCCACCAGGTGCCATTAATGTGCAAATCTACAGGCTTATAAAGGAGTGGACAGCATGGGACATAGCCAGGAGAGCTGCATTTGCATTTTTTGGCATCTTTTCGGGTACCGAAGAAAACCCAGAGTTCTTGCAAAGTGTAGAATCTAAAATTGATAAAGATGCCAAAATAATAGTAGCATGCTCATCAGGTGGAACAATGAAACCTACCCAGAATCTTCCAGAAGGTCAACAATCAAGGTCACTGATAGCAGCCTACTTGTTGGTTCTCAATGGGTACGCCAACGTATTTCACTTAGAAGGTGGTCTCTACAATTGGTTCAAAGAAGGATTGCCTGTAGTTTCAGAAGAATAA ATGGCTGCTTTTGCCTCACTACCCCTAACTTCATCTTCTTTACATCCAGTTGTCCAATTCTCACCTCTTGTATTCTCCTCAAAAGTTGTATATGACCCAAGTTCCTATTGCTTCACAGTCAGATCAATCAGATATGGAAACCAAAAATTTTCCTCTCAGTCCAACCCAAGGAGTTTGATAATTCTTGGGGCAGCAACAAAACAAGCAAAAACACCAGCTGAAGAGGATTGGAAGGTGAAGAGGGAACTTCTGCTGCAGAAAAGGGTAAGGAGTGTGGATGCTAATGAAGCTCTGCGCCTTCAAAAGGAAAACAACTTTGTGATTCTTGATGTCAGGCCAGAAGCAGAATTCAAAGAGGGCCATCCACCAGGTGCCATTAATGTGCAAATCTACAGGCTTATAAAGGAGTGGACAGCATGGGACATAGCCAGGAGAGCTGCATTTGCATTTTTTGGCATCTTTTCGGGTACCGAAGAAAACCCAGAGTTCTTGCAAAGTGTAGAATCTAAAATTGATAAAGATGCCAAAATAATAGTAGCATGCTCATCAGGTGGAACAATGAAACCTACCCAGAATCTTCCAGAAGGTCAACAATCAAGGTCACTGATAGCAGCCTACTTGTTGGTTCTCAATGGGTACGCCAACGTATTTCACTTAGAAGGTGGTCTCTACAATTGGTTCAAAGAAGGATTGCCTGTAGTTTCAGAAGAATAA MAAFASLPLTSSSLHPVVQFSPLVFSSKVVYDPSSYCFTVRSIRYGNQKFSSQSNPRSLIILGAATKQAKTPAEEDWKVKRELLLQKRVRSVDANEALRLQKENNFVILDVRPEAEFKEGHPPGAINVQIYRLIKEWTAWDIARRAAFAFFGIFSGTEENPEFLQSVESKIDKDAKIIVACSSGGTMKPTQNLPEGQQSRSLIAAYLLVLNGYANVFHLEGGLYNWFKEGLPVVSEE
BLAST of CsGy3G019530 vs. NCBI nr
Match: XP_004146237.1 (PREDICTED: rhodanese-like domain-containing protein 14, chloroplastic [Cucumis sativus] >KGN57646.1 hypothetical protein Csa_3G238120 [Cucumis sativus]) HSP 1 Score: 472.2 bits (1214), Expect = 1.0e-129 Identity = 237/237 (100.00%), Postives = 237/237 (100.00%), Query Frame = 0
BLAST of CsGy3G019530 vs. NCBI nr
Match: XP_008456000.1 (PREDICTED: rhodanese-like domain-containing protein 14, chloroplastic [Cucumis melo]) HSP 1 Score: 454.9 bits (1169), Expect = 1.7e-124 Identity = 228/237 (96.20%), Postives = 233/237 (98.31%), Query Frame = 0
BLAST of CsGy3G019530 vs. NCBI nr
Match: XP_022984535.1 (rhodanese-like domain-containing protein 14, chloroplastic [Cucurbita maxima]) HSP 1 Score: 442.6 bits (1137), Expect = 8.5e-121 Identity = 222/237 (93.67%), Postives = 228/237 (96.20%), Query Frame = 0
BLAST of CsGy3G019530 vs. NCBI nr
Match: XP_022923075.1 (rhodanese-like domain-containing protein 14, chloroplastic [Cucurbita moschata]) HSP 1 Score: 439.9 bits (1130), Expect = 5.5e-120 Identity = 222/237 (93.67%), Postives = 227/237 (95.78%), Query Frame = 0
BLAST of CsGy3G019530 vs. NCBI nr
Match: XP_023553426.1 (rhodanese-like domain-containing protein 14, chloroplastic [Cucurbita pepo subsp. pepo]) HSP 1 Score: 435.3 bits (1118), Expect = 1.4e-118 Identity = 219/237 (92.41%), Postives = 225/237 (94.94%), Query Frame = 0
BLAST of CsGy3G019530 vs. TAIR10
Match: AT4G27700.1 (Rhodanese/Cell cycle control phosphatase superfamily protein) HSP 1 Score: 299.7 bits (766), Expect = 1.6e-81 Identity = 154/214 (71.96%), Postives = 172/214 (80.37%), Query Frame = 0
BLAST of CsGy3G019530 vs. TAIR10
Match: AT2G42220.1 (Rhodanese/Cell cycle control phosphatase superfamily protein) HSP 1 Score: 61.2 bits (147), Expect = 9.7e-10 Identity = 41/148 (27.70%), Postives = 72/148 (48.65%), Query Frame = 0
BLAST of CsGy3G019530 vs. TAIR10
Match: AT4G24750.1 (Rhodanese/Cell cycle control phosphatase superfamily protein) HSP 1 Score: 58.2 bits (139), Expect = 8.2e-09 Identity = 47/145 (32.41%), Postives = 69/145 (47.59%), Query Frame = 0
BLAST of CsGy3G019530 vs. TAIR10
Match: AT3G08920.1 (Rhodanese/Cell cycle control phosphatase superfamily protein) HSP 1 Score: 57.4 bits (137), Expect = 1.4e-08 Identity = 47/163 (28.83%), Postives = 79/163 (48.47%), Query Frame = 0
BLAST of CsGy3G019530 vs. Swiss-Prot
Match: sp|Q94A65|STR14_ARATH (Rhodanese-like domain-containing protein 14, chloroplastic OS=Arabidopsis thaliana OX=3702 GN=At4g27700 PE=2 SV=1) HSP 1 Score: 299.7 bits (766), Expect = 2.9e-80 Identity = 154/214 (71.96%), Postives = 172/214 (80.37%), Query Frame = 0
BLAST of CsGy3G019530 vs. Swiss-Prot
Match: sp|O48529|STR9_ARATH (Rhodanese-like domain-containing protein 9, chloroplastic OS=Arabidopsis thaliana OX=3702 GN=STR9 PE=2 SV=1) HSP 1 Score: 61.2 bits (147), Expect = 1.8e-08 Identity = 41/148 (27.70%), Postives = 72/148 (48.65%), Query Frame = 0
BLAST of CsGy3G019530 vs. Swiss-Prot
Match: sp|Q0WWT7|STR11_ARATH (Rhodanese-like domain-containing protein 11, chloroplastic OS=Arabidopsis thaliana OX=3702 GN=STR11 PE=2 SV=1) HSP 1 Score: 58.2 bits (139), Expect = 1.5e-07 Identity = 47/145 (32.41%), Postives = 69/145 (47.59%), Query Frame = 0
BLAST of CsGy3G019530 vs. Swiss-Prot
Match: sp|Q9SR92|STR10_ARATH (Rhodanese-like domain-containing protein 10 OS=Arabidopsis thaliana OX=3702 GN=STR10 PE=2 SV=1) HSP 1 Score: 57.4 bits (137), Expect = 2.5e-07 Identity = 47/163 (28.83%), Postives = 79/163 (48.47%), Query Frame = 0
BLAST of CsGy3G019530 vs. TrEMBL
Match: tr|A0A0A0LC69|A0A0A0LC69_CUCSA (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_3G238120 PE=4 SV=1) HSP 1 Score: 472.2 bits (1214), Expect = 6.7e-130 Identity = 237/237 (100.00%), Postives = 237/237 (100.00%), Query Frame = 0
BLAST of CsGy3G019530 vs. TrEMBL
Match: tr|A0A1S3C2W7|A0A1S3C2W7_CUCME (rhodanese-like domain-containing protein 14, chloroplastic OS=Cucumis melo OX=3656 GN=LOC103496057 PE=4 SV=1) HSP 1 Score: 454.9 bits (1169), Expect = 1.1e-124 Identity = 228/237 (96.20%), Postives = 233/237 (98.31%), Query Frame = 0
BLAST of CsGy3G019530 vs. TrEMBL
Match: tr|A0A2C9WIX0|A0A2C9WIX0_MANES (Uncharacterized protein OS=Manihot esculenta OX=3983 GN=MANES_01G037500 PE=4 SV=1) HSP 1 Score: 365.9 bits (938), Expect = 6.7e-98 Identity = 190/239 (79.50%), Postives = 207/239 (86.61%), Query Frame = 0
BLAST of CsGy3G019530 vs. TrEMBL
Match: tr|V4T2K2|V4T2K2_9ROSI (Uncharacterized protein OS=Citrus clementina OX=85681 GN=CICLE_v10021946mg PE=4 SV=1) HSP 1 Score: 363.2 bits (931), Expect = 4.4e-97 Identity = 186/240 (77.50%), Postives = 203/240 (84.58%), Query Frame = 0
BLAST of CsGy3G019530 vs. TrEMBL
Match: tr|A0A067EX39|A0A067EX39_CITSI (Uncharacterized protein OS=Citrus sinensis OX=2711 GN=CISIN_1g026264mg PE=4 SV=1) HSP 1 Score: 363.2 bits (931), Expect = 4.4e-97 Identity = 186/240 (77.50%), Postives = 203/240 (84.58%), Query Frame = 0
The following BLAST results are available for this feature:
GO Assignments
This gene is annotated with the following GO terms.
The following mRNA feature(s) are a part of this gene:
Analysis Name: InterPro Annotations of cucumber Gy14 genome (v2)
Date Performed: 2018-09-25
The following gene(s) are orthologous to this gene:
The following gene(s) are paralogous to this gene: None The following block(s) are covering this gene:
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