CmoCh16G000360 (gene) Cucurbita moschata (Rifu)

NameCmoCh16G000360
Typegene
OrganismCucurbita moschata (Cucurbita moschata (Rifu))
DescriptionRhodanese-like domain-containing family protein
LocationCmo_Chr16 : 164072 .. 166016 (-)
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonfive_prime_UTRCDSthree_prime_UTR
Hold the cursor over a type above to highlight its positions in the sequence below.
AGAATACAATTATATATAAGCATCGACATTATATGTTGGCCATTTTCTTTCAGTTGATTTCACTGGACGAAGATCCTAAAGATGGCTGCTTTCGCCCCGCTGCCGTTAACTTCGCCTTCTTTACATCCTGTTGTCCAATTCTCACCTCTTGTGTTCTCCTCAAAAGTTCTATATGACCCAAGTTCCCATTGCCTCACCGTCGGATCAATAAGACCTGCAAGGCAAAAATTCACCTCTCAAACTAACCCGAGGAGCCTGATAATCCTTGGTGCAGCAACAAAACGAGCAAAAACACCAGGTATTCTCTTCTAGTTGAATATTTAATCAGACTGTGTTCTTTTTCCAGGTAATATGGTAGAAATTTCAATCTTTTTAGTTTTAATTCACTAGCATAAAAGTGGGTTTATTCTCGTCTATCTGGAGGATTCAGCTGAAGAGGATTGGAAGGTGAAGAGGGAACTTCTGCTGCAGAAAAGGGTTCGACTCTCTATCTACCACTTGAGTGAATATTGGATGAGTGTTCGGTTTCATTAATCTAAAACTACATGGAAACACATTACACTTGTTTTCGTCACAACATCCAAGGTTTGGTTATAACAAAGCTTGAAATTTTATGAACATGAGAATTAAGATCTTTACTGCAGGTTAGGAGTGTGGATGCGAATGAAGCTCTGCGCCTTCAGAAGGAAAATAACTTCGTGATTCTTGATGTGAGGCCAGAAGCAGAATTCAAAGAGGTTATTAGAGTATTTTTTTTTCCTTTAAGTCTATAACAACCAATGAAATGTTACATCTTATGTCCACTTTTTGGTGTAGGGCCATCCACCAGGGGCCATTAATGTGCAAATTTACAGGCTTATAAAGGAGTGGACAGCATGGGACATAGCCAGGCGAGCTGCATTTGCATTTTTTGGCATCTTTTCGGGTACAGAAGAAAACCCAGAATTCTTGCAAAGTAAGTTGCTTATGAACCCCTTCCTCACTTGACGCCTTGTTCTGAAGTGATATGGAGAAGTGAATGACAGAGTGTATTCTACAGGTGTAGAATCTAAAATAGCTAAAGATGCGAAAATAATAGTAGCATGCTCATCAGGTGGAACAATGAAACCTACCCAGAATCTTCCAGAAGGTCAACAATCAAGGTACTTGAGCTCTTGACAGCAACTCTTTGAGTTTCTCAACTTTGCAGAGTAATATGCATATTATATGAGCATTACATGTTTTTTATATTTTACAAGTATCACTCATCGTTTGGTTAACACTGTTAAACGGGTAGAACGGTGCAAATAATGATTTGTTCAACGAGTATTAACAAGATGAAGAATCAATAAGATGAATCTGCAGTCCAAAATCGCATGTGCCTTCTGTTTGTTGCCCGAGGATTATTTGCTTTTTCGCTGAAGTTTAAGTTTTGATGCTTTTAACAGGTCATTGATAGCAGCCTACTTGTTGGTTCTCAACGGCTACAACAACGTATTTCACTTAGAAGGTGGTCTCTATAATTGGTTCAAAGAAGGATTGCCTGTAGATTCAGAAGAGTAAGGTGGTCTCTGCAAGATTTTCGGAAGTAAAATAGGTTGTCATTTTTGGTGGGCGCCCATTAGAGAACAGAGCCAAGTGCTGCTCTGGCAAGACTTGCTTGGGTTGTGAGTGTTAACTACGACAGCATCGCCAGGATCCTCCTTTGTAAACGTTCAATTATAAGTTGGACAGAATAGAAGACTAGATTTTGTTTCACTGCGGAAACACCCACTCCCGTTTGATGTTTAGTTTGTAATGAAAAATGTGTATGCATAAGTTTTCGTTGTAATGCTGCAACTAATATGATATTCCAGTTGAGGTATTGAACTCTTAAATCTGTAAATCCGTTCAGCTTATTAAAAGCTAGAAGATTGCATGTCCTATGAATCATACAGTCACCGAAAGTTATCAGTTATCAGGCAGC

mRNA sequence

AGAATACAATTATATATAAGCATCGACATTATATGTTGGCCATTTTCTTTCAGTTGATTTCACTGGACGAAGATCCTAAAGATGGCTGCTTTCGCCCCGCTGCCGTTAACTTCGCCTTCTTTACATCCTGTTGTCCAATTCTCACCTCTTGTGTTCTCCTCAAAAGTTCTATATGACCCAAGTTCCCATTGCCTCACCGTCGGATCAATAAGACCTGCAAGGCAAAAATTCACCTCTCAAACTAACCCGAGGAGCCTGATAATCCTTGGTGCAGCAACAAAACGAGCAAAAACACCAGCTGAAGAGGATTGGAAGGTGAAGAGGGAACTTCTGCTGCAGAAAAGGGTTAGGAGTGTGGATGCGAATGAAGCTCTGCGCCTTCAGAAGGAAAATAACTTCGTGATTCTTGATGTGAGGCCAGAAGCAGAATTCAAAGAGGGCCATCCACCAGGGGCCATTAATGTGCAAATTTACAGGCTTATAAAGGAGTGGACAGCATGGGACATAGCCAGGCGAGCTGCATTTGCATTTTTTGGCATCTTTTCGGGTACAGAAGAAAACCCAGAATTCTTGCAAAGTGTAGAATCTAAAATAGCTAAAGATGCGAAAATAATAGTAGCATGCTCATCAGGTGGAACAATGAAACCTACCCAGAATCTTCCAGAAGGTCAACAATCAAGGTCATTGATAGCAGCCTACTTGTTGGTTCTCAACGGCTACAACAACGTATTTCACTTAGAAGGTGGTCTCTATAATTGGTTCAAAGAAGGATTGCCTGTAGATTCAGAAGAGTAAGGTGGTCTCTGCAAGATTTTCGGAAGTAAAATAGGTTGTCATTTTTGGTGGGCGCCCATTAGAGAACAGAGCCAAGTGCTGCTCTGGCAAGACTTGCTTGGGTTGTGAGTGTTAACTACGACAGCATCGCCAGGATCCTCCTTTGTAAACGTTCAATTATAAGTTGGACAGAATAGAAGACTAGATTTTGTTTCACTGCGGAAACACCCACTCCCGTTTGATGTTTAGTTTGTAATGAAAAATGTGTATGCATAAGTTTTCGTTGTAATGCTGCAACTAATATGATATTCCAGTTGAGGTATTGAACTCTTAAATCTGTAAATCCGTTCAGCTTATTAAAAGCTAGAAGATTGCATGTCCTATGAATCATACAGTCACCGAAAGTTATCAGTTATCAGGCAGC

Coding sequence (CDS)

ATGGCTGCTTTCGCCCCGCTGCCGTTAACTTCGCCTTCTTTACATCCTGTTGTCCAATTCTCACCTCTTGTGTTCTCCTCAAAAGTTCTATATGACCCAAGTTCCCATTGCCTCACCGTCGGATCAATAAGACCTGCAAGGCAAAAATTCACCTCTCAAACTAACCCGAGGAGCCTGATAATCCTTGGTGCAGCAACAAAACGAGCAAAAACACCAGCTGAAGAGGATTGGAAGGTGAAGAGGGAACTTCTGCTGCAGAAAAGGGTTAGGAGTGTGGATGCGAATGAAGCTCTGCGCCTTCAGAAGGAAAATAACTTCGTGATTCTTGATGTGAGGCCAGAAGCAGAATTCAAAGAGGGCCATCCACCAGGGGCCATTAATGTGCAAATTTACAGGCTTATAAAGGAGTGGACAGCATGGGACATAGCCAGGCGAGCTGCATTTGCATTTTTTGGCATCTTTTCGGGTACAGAAGAAAACCCAGAATTCTTGCAAAGTGTAGAATCTAAAATAGCTAAAGATGCGAAAATAATAGTAGCATGCTCATCAGGTGGAACAATGAAACCTACCCAGAATCTTCCAGAAGGTCAACAATCAAGGTCATTGATAGCAGCCTACTTGTTGGTTCTCAACGGCTACAACAACGTATTTCACTTAGAAGGTGGTCTCTATAATTGGTTCAAAGAAGGATTGCCTGTAGATTCAGAAGAGTAA
BLAST of CmoCh16G000360 vs. Swiss-Prot
Match: STR14_ARATH (Rhodanese-like domain-containing protein 14, chloroplastic OS=Arabidopsis thaliana GN=At4g27700 PE=2 SV=1)

HSP 1 Score: 296.6 bits (758), Expect = 2.4e-79
Identity = 144/181 (79.56%), Postives = 160/181 (88.40%), Query Frame = 1

Query: 57  RSLIILGAATKRAKTPAEEDWKVKRELLLQKRVRSVDANEALRLQKENNFVILDVRPEAE 116
           ++L I   +TK AK  AE DW+ KRELLL+KRVRSVD  EA RLQKENNFVILDVRPEAE
Sbjct: 42  KTLKIQCTSTKPAKPAAEVDWRQKRELLLEKRVRSVDVKEAQRLQKENNFVILDVRPEAE 101

Query: 117 FKEGHPPGAINVQIYRLIKEWTAWDIARRAAFAFFGIFSGTEENPEFLQSVESKIAKDAK 176
           +K GHPPGAINV++YRLI+EWTAWDIARR  FAFFGIFSGTEENPEF+QSVE+K+ K+AK
Sbjct: 102 YKAGHPPGAINVEMYRLIREWTAWDIARRLGFAFFGIFSGTEENPEFIQSVEAKLDKEAK 161

Query: 177 IIVACSSGGTMKPTQNLPEGQQSRSLIAAYLLVLNGYNNVFHLEGGLYNWFKEGLPVDSE 236
           IIVACSS GTMKPTQNLPEGQQSRSLIAAYLLVLNGY NVFHLEGG+Y W KEGLPV++ 
Sbjct: 162 IIVACSSAGTMKPTQNLPEGQQSRSLIAAYLLVLNGYKNVFHLEGGIYTWGKEGLPVETI 221

Query: 237 E 238
           E
Sbjct: 222 E 222

BLAST of CmoCh16G000360 vs. Swiss-Prot
Match: STR9_ARATH (Rhodanese-like domain-containing protein 9, chloroplastic OS=Arabidopsis thaliana GN=STR9 PE=2 SV=1)

HSP 1 Score: 62.0 bits (149), Expect = 1.0e-08
Identity = 49/183 (26.78%), Postives = 82/183 (44.81%), Query Frame = 1

Query: 45  PARQKFTSQTNPRSLIILGAATKRAKTPAEEDWKVKRELLLQKRVRSVDANEALRLQKEN 104
           P    FTS    R L  +  A K            +R L +   ++ V+A EA +L  E 
Sbjct: 9   PTALYFTSNVGGRRLKAVSWAGKSVSGNVIR----RRSLRIAAELKFVNAEEAKQLIAEE 68

Query: 105 NFVILDVRPEAEFKEGHPPGAINVQIYRLIKEWTAWDIARRAAFA-FFGIFSG---TEEN 164
            + ++DVR + +F+  H     ++ ++   ++     I +R     F G+F G   T+ N
Sbjct: 69  GYSVVDVRDKTQFERAHIKSCSHIPLFIYNEDNDIGTIIKRTVHNNFSGLFFGLPFTKVN 128

Query: 165 PEFLQSVESKIAKDAKIIVACSSGGTMKPTQNLPEGQQSRSLIAAYLLVLNGYNNVFHLE 224
           PEFL+SV ++ ++D+K+++ C  G               RS  AA  L   GY N+  + 
Sbjct: 129 PEFLKSVRNEFSQDSKLLLVCQEG--------------LRSAAAASRLEEAGYENIACVT 173

BLAST of CmoCh16G000360 vs. Swiss-Prot
Match: STR11_ARATH (Rhodanese-like domain-containing protein 11, chloroplastic OS=Arabidopsis thaliana GN=STR11 PE=2 SV=1)

HSP 1 Score: 58.5 bits (140), Expect = 1.1e-07
Identity = 47/145 (32.41%), Postives = 69/145 (47.59%), Query Frame = 1

Query: 83  LLLQKRVRSVDANEALRLQKENNFVILDVRPEAEFKEGHPPGAINVQIYRLIKEWTAWDI 142
           LL + +V+ +   EA      +N  +LDVRP +E  +    G+  V I+       A  +
Sbjct: 82  LLREGKVKLLTPREAGYAISLSNKPLLDVRPSSERNKAWIKGSTWVPIFDNDDNLDAGTL 141

Query: 143 ARRA-AFAFFGIFSGTEE---NPEFLQSVESKIAKDAKIIVACSSGGTMKPTQNLPEGQQ 202
           +++  +FA  G +SG      N  FL  VE K  KD+++IVAC  G              
Sbjct: 142 SKKVTSFAMGGWWSGAPTLSFNRLFLSKVEEKFPKDSELIVACQKG-------------- 201

Query: 203 SRSLIAAYLLVLNGYNNVFHLEGGL 224
            RSL A  LL   GY N+F ++GGL
Sbjct: 202 LRSLAACELLYNAGYENLFWVQGGL 212

BLAST of CmoCh16G000360 vs. Swiss-Prot
Match: STR18_ARATH (Thiosulfate sulfurtransferase 18 OS=Arabidopsis thaliana GN=STR18 PE=1 SV=1)

HSP 1 Score: 53.1 bits (126), Expect = 4.7e-06
Identity = 44/151 (29.14%), Postives = 63/151 (41.72%), Query Frame = 1

Query: 87  KRVRSVDANEALRLQKENNFVILDVRPEAEFKEGHPPGAINVQIYRLIKEWTAWDIARRA 146
           + V SVD ++A  L +  +   LDVR + EF+ GH   A  V I  ++            
Sbjct: 12  EEVVSVDVSQAKTLLQSGH-QYLDVRTQDEFRRGHCEAAKIVNIPYMLNTP--------- 71

Query: 147 AFAFFGIFSGTEENPEFLQSVESKIAKDAKIIVACSSGGTMKPTQNLPEGQQSRSLIAAY 206
                    G  +N EFL+ V S +     I+V C SG              +RSL A  
Sbjct: 72  --------QGRVKNQEFLEQVSSLLNPADDILVGCQSG--------------ARSLKATT 130

Query: 207 LLVLNGYNNVFHLEGGLYNWFKEGLPVDSEE 238
            LV  GY  V ++ GG   W     P+++EE
Sbjct: 132 ELVAAGYKKVRNVGGGYLAWVDHSFPINTEE 130

BLAST of CmoCh16G000360 vs. TrEMBL
Match: A0A0A0LC69_CUCSA (Uncharacterized protein OS=Cucumis sativus GN=Csa_3G238120 PE=4 SV=1)

HSP 1 Score: 440.3 bits (1131), Expect = 1.5e-120
Identity = 222/237 (93.67%), Postives = 227/237 (95.78%), Query Frame = 1

Query: 1   MAAFAPLPLTSPSLHPVVQFSPLVFSSKVLYDPSSHCLTVGSIRPARQKFTSQTNPRSLI 60
           MAAFA LPLTS SLHPVVQFSPLVFSSKV+YDPSS+C TV SIR   QKF+SQ+NPRSLI
Sbjct: 1   MAAFASLPLTSSSLHPVVQFSPLVFSSKVVYDPSSYCFTVRSIRYGNQKFSSQSNPRSLI 60

Query: 61  ILGAATKRAKTPAEEDWKVKRELLLQKRVRSVDANEALRLQKENNFVILDVRPEAEFKEG 120
           ILGAATK+AKTPAEEDWKVKRELLLQKRVRSVDANEALRLQKENNFVILDVRPEAEFKEG
Sbjct: 61  ILGAATKQAKTPAEEDWKVKRELLLQKRVRSVDANEALRLQKENNFVILDVRPEAEFKEG 120

Query: 121 HPPGAINVQIYRLIKEWTAWDIARRAAFAFFGIFSGTEENPEFLQSVESKIAKDAKIIVA 180
           HPPGAINVQIYRLIKEWTAWDIARRAAFAFFGIFSGTEENPEFLQSVESKI KDAKIIVA
Sbjct: 121 HPPGAINVQIYRLIKEWTAWDIARRAAFAFFGIFSGTEENPEFLQSVESKIDKDAKIIVA 180

Query: 181 CSSGGTMKPTQNLPEGQQSRSLIAAYLLVLNGYNNVFHLEGGLYNWFKEGLPVDSEE 238
           CSSGGTMKPTQNLPEGQQSRSLIAAYLLVLNGY NVFHLEGGLYNWFKEGLPV SEE
Sbjct: 181 CSSGGTMKPTQNLPEGQQSRSLIAAYLLVLNGYANVFHLEGGLYNWFKEGLPVVSEE 237

BLAST of CmoCh16G000360 vs. TrEMBL
Match: B9IDL2_POPTR (Rhodanese-like domain-containing family protein OS=Populus trichocarpa GN=POPTR_0015s01040g PE=4 SV=1)

HSP 1 Score: 354.8 bits (909), Expect = 8.4e-95
Identity = 177/229 (77.29%), Postives = 194/229 (84.72%), Query Frame = 1

Query: 8   PLTSPSLHPVVQFSPLVFSSKVLYDPSSHCLTVGSIRPARQKFTSQTNPRSLIILGAATK 67
           P +S SL+P  Q SPL+FSSK   DPS    TV S    R + +S T PR L +  AATK
Sbjct: 10  PSSSSSLYPNYQSSPLIFSSKTAQDPSLPFFTVRSNGSLRGRSSSCTVPRGLRVFNAATK 69

Query: 68  RAKTPAEEDWKVKRELLLQKRVRSVDANEALRLQKENNFVILDVRPEAEFKEGHPPGAIN 127
            AK+PAEEDWK KRE+LLQK+VRSVD  EALRLQKENNFVILDVRPEAEFKE HPPGAIN
Sbjct: 70  PAKSPAEEDWKTKREVLLQKKVRSVDVKEALRLQKENNFVILDVRPEAEFKEAHPPGAIN 129

Query: 128 VQIYRLIKEWTAWDIARRAAFAFFGIFSGTEENPEFLQSVESKIAKDAKIIVACSSGGTM 187
           VQ+YRLIKEWTAWDIARRAAFAFFGIF+GTEENPEF+Q+VESKI K AKIIVACS+GGTM
Sbjct: 130 VQVYRLIKEWTAWDIARRAAFAFFGIFAGTEENPEFMQTVESKIDKSAKIIVACSAGGTM 189

Query: 188 KPTQNLPEGQQSRSLIAAYLLVLNGYNNVFHLEGGLYNWFKEGLPVDSE 237
           +P+QNLPEGQQSRSLIAAYLLVLNGY NVFHLEGGLY WFKEGLP +SE
Sbjct: 190 RPSQNLPEGQQSRSLIAAYLLVLNGYTNVFHLEGGLYKWFKEGLPAESE 238

BLAST of CmoCh16G000360 vs. TrEMBL
Match: A0A067EX39_CITSI (Uncharacterized protein OS=Citrus sinensis GN=CISIN_1g026264mg PE=4 SV=1)

HSP 1 Score: 352.8 bits (904), Expect = 3.2e-94
Identity = 177/225 (78.67%), Postives = 195/225 (86.67%), Query Frame = 1

Query: 13  SLHPVVQFSPLVFSSKVLYDPSSHCLTVGSIRPARQKFTSQTNPRSLIILGAATKRAKTP 72
           SL+P  + SPL+ + K   D +  CLTV S   +R++ +SQ+ PR LII  AATK AK+P
Sbjct: 16  SLYPNYRSSPLILAPKTNQDTTICCLTVRSFTFSRRRLSSQSVPRGLIIQNAATKPAKSP 75

Query: 73  AEEDWKVKRELLLQKRVRSVDANEALRLQKENNFVILDVRPEAEFKEGHPPGAINVQIYR 132
           AEEDWK KRELLLQKRVRSV+A EALRLQKENNFVILDVRPEAEFKE HPPGAINVQIYR
Sbjct: 76  AEEDWKTKRELLLQKRVRSVEAKEALRLQKENNFVILDVRPEAEFKEAHPPGAINVQIYR 135

Query: 133 LIKEWTAWDIARRAAFAFFGIFSGTEENPEFLQSVESKIAKDAKIIVACSSGGTMKPTQN 192
           LIKEWTAWDIARRAAFAFFGIFSGTEENPEFLQSVES++ KDAKIIVAC++GGTMKP+QN
Sbjct: 136 LIKEWTAWDIARRAAFAFFGIFSGTEENPEFLQSVESQLDKDAKIIVACATGGTMKPSQN 195

Query: 193 LPEGQQSRSLIAAYLLVLNGYNNVFHLEGGLYNWFKEGLPVDSEE 238
           LPEGQQSRSLIAAYLLVLNGY NV+HLEGGLY WFKE LP  SEE
Sbjct: 196 LPEGQQSRSLIAAYLLVLNGYKNVYHLEGGLYKWFKEELPEVSEE 240

BLAST of CmoCh16G000360 vs. TrEMBL
Match: V4T2K2_9ROSI (Uncharacterized protein OS=Citrus clementina GN=CICLE_v10021946mg PE=4 SV=1)

HSP 1 Score: 352.8 bits (904), Expect = 3.2e-94
Identity = 177/225 (78.67%), Postives = 195/225 (86.67%), Query Frame = 1

Query: 13  SLHPVVQFSPLVFSSKVLYDPSSHCLTVGSIRPARQKFTSQTNPRSLIILGAATKRAKTP 72
           SL+P  + SPL+ + K   D +  CLTV S   +R++ +SQ+ PR LII  AATK AK+P
Sbjct: 16  SLYPNYRSSPLILAPKTNQDTTLCCLTVRSFTFSRRRLSSQSVPRGLIIQNAATKPAKSP 75

Query: 73  AEEDWKVKRELLLQKRVRSVDANEALRLQKENNFVILDVRPEAEFKEGHPPGAINVQIYR 132
           AEEDWK KRELLLQKRVRSV+A EALRLQKENNFVILDVRPEAEFKE HPPGAINVQIYR
Sbjct: 76  AEEDWKTKRELLLQKRVRSVEAKEALRLQKENNFVILDVRPEAEFKEAHPPGAINVQIYR 135

Query: 133 LIKEWTAWDIARRAAFAFFGIFSGTEENPEFLQSVESKIAKDAKIIVACSSGGTMKPTQN 192
           LIKEWTAWDIARRAAFAFFGIFSGTEENPEFLQSVES++ KDAKIIVAC++GGTMKP+QN
Sbjct: 136 LIKEWTAWDIARRAAFAFFGIFSGTEENPEFLQSVESQLDKDAKIIVACATGGTMKPSQN 195

Query: 193 LPEGQQSRSLIAAYLLVLNGYNNVFHLEGGLYNWFKEGLPVDSEE 238
           LPEGQQSRSLIAAYLLVLNGY NV+HLEGGLY WFKE LP  SEE
Sbjct: 196 LPEGQQSRSLIAAYLLVLNGYKNVYHLEGGLYKWFKEELPEVSEE 240

BLAST of CmoCh16G000360 vs. TrEMBL
Match: J7FWP1_ROSRU (Rhodanese-like domain-containing protein OS=Rosa rugosa PE=4 SV=1)

HSP 1 Score: 350.9 bits (899), Expect = 1.2e-93
Identity = 181/229 (79.04%), Postives = 198/229 (86.46%), Query Frame = 1

Query: 9   LTSPSLHPVVQFSPLVFSSKVLYDPSSHCLTVGSIRPARQKFTSQTNPRSLIILGAATKR 68
           LTS SLH     S L F+SK  +D +S   TV S+R  RQ  +SQT PR L I  AATK+
Sbjct: 4   LTSISLH---SSSLLGFASK--HDHTSCWFTVRSVRSTRQGLSSQTVPRGLKIRSAATKQ 63

Query: 69  AKTPAEEDWKVKRELLLQKRVRSVDANEALRLQKENNFVILDVRPEAEFKEGHPPGAINV 128
           AKTPAEEDWK+KRELLLQK+VRSVDA EALRLQKENNFVILDVRP AEFKE HPP A+NV
Sbjct: 64  AKTPAEEDWKIKRELLLQKKVRSVDAKEALRLQKENNFVILDVRPVAEFKEAHPPNAVNV 123

Query: 129 QIYRLIKEWTAWDIARRAAFAFFGIFSGTEENPEFLQSVESKIAKDAKIIVACSSGGTMK 188
           QIYRLIKEWTAWDIARRAAFAFFGIF+GTEENPEF+Q+VESKI K AKIIVAC+SGGTM+
Sbjct: 124 QIYRLIKEWTAWDIARRAAFAFFGIFAGTEENPEFIQTVESKIDKKAKIIVACASGGTMR 183

Query: 189 PTQNLPEGQQSRSLIAAYLLVLNGYNNVFHLEGGLYNWFKEGLPVDSEE 238
           PTQNLPEGQQSRSLIAAYLLVLNGY NVFHLEGGLY+WFKEGLPV+S+E
Sbjct: 184 PTQNLPEGQQSRSLIAAYLLVLNGYTNVFHLEGGLYSWFKEGLPVESKE 227

BLAST of CmoCh16G000360 vs. TAIR10
Match: AT4G27700.1 (AT4G27700.1 Rhodanese/Cell cycle control phosphatase superfamily protein)

HSP 1 Score: 296.6 bits (758), Expect = 1.4e-80
Identity = 144/181 (79.56%), Postives = 160/181 (88.40%), Query Frame = 1

Query: 57  RSLIILGAATKRAKTPAEEDWKVKRELLLQKRVRSVDANEALRLQKENNFVILDVRPEAE 116
           ++L I   +TK AK  AE DW+ KRELLL+KRVRSVD  EA RLQKENNFVILDVRPEAE
Sbjct: 42  KTLKIQCTSTKPAKPAAEVDWRQKRELLLEKRVRSVDVKEAQRLQKENNFVILDVRPEAE 101

Query: 117 FKEGHPPGAINVQIYRLIKEWTAWDIARRAAFAFFGIFSGTEENPEFLQSVESKIAKDAK 176
           +K GHPPGAINV++YRLI+EWTAWDIARR  FAFFGIFSGTEENPEF+QSVE+K+ K+AK
Sbjct: 102 YKAGHPPGAINVEMYRLIREWTAWDIARRLGFAFFGIFSGTEENPEFIQSVEAKLDKEAK 161

Query: 177 IIVACSSGGTMKPTQNLPEGQQSRSLIAAYLLVLNGYNNVFHLEGGLYNWFKEGLPVDSE 236
           IIVACSS GTMKPTQNLPEGQQSRSLIAAYLLVLNGY NVFHLEGG+Y W KEGLPV++ 
Sbjct: 162 IIVACSSAGTMKPTQNLPEGQQSRSLIAAYLLVLNGYKNVFHLEGGIYTWGKEGLPVETI 221

Query: 237 E 238
           E
Sbjct: 222 E 222

BLAST of CmoCh16G000360 vs. TAIR10
Match: AT2G42220.1 (AT2G42220.1 Rhodanese/Cell cycle control phosphatase superfamily protein)

HSP 1 Score: 62.0 bits (149), Expect = 5.7e-10
Identity = 49/183 (26.78%), Postives = 82/183 (44.81%), Query Frame = 1

Query: 45  PARQKFTSQTNPRSLIILGAATKRAKTPAEEDWKVKRELLLQKRVRSVDANEALRLQKEN 104
           P    FTS    R L  +  A K            +R L +   ++ V+A EA +L  E 
Sbjct: 9   PTALYFTSNVGGRRLKAVSWAGKSVSGNVIR----RRSLRIAAELKFVNAEEAKQLIAEE 68

Query: 105 NFVILDVRPEAEFKEGHPPGAINVQIYRLIKEWTAWDIARRAAFA-FFGIFSG---TEEN 164
            + ++DVR + +F+  H     ++ ++   ++     I +R     F G+F G   T+ N
Sbjct: 69  GYSVVDVRDKTQFERAHIKSCSHIPLFIYNEDNDIGTIIKRTVHNNFSGLFFGLPFTKVN 128

Query: 165 PEFLQSVESKIAKDAKIIVACSSGGTMKPTQNLPEGQQSRSLIAAYLLVLNGYNNVFHLE 224
           PEFL+SV ++ ++D+K+++ C  G               RS  AA  L   GY N+  + 
Sbjct: 129 PEFLKSVRNEFSQDSKLLLVCQEG--------------LRSAAAASRLEEAGYENIACVT 173

BLAST of CmoCh16G000360 vs. TAIR10
Match: AT4G24750.1 (AT4G24750.1 Rhodanese/Cell cycle control phosphatase superfamily protein)

HSP 1 Score: 58.5 bits (140), Expect = 6.3e-09
Identity = 47/145 (32.41%), Postives = 69/145 (47.59%), Query Frame = 1

Query: 83  LLLQKRVRSVDANEALRLQKENNFVILDVRPEAEFKEGHPPGAINVQIYRLIKEWTAWDI 142
           LL + +V+ +   EA      +N  +LDVRP +E  +    G+  V I+       A  +
Sbjct: 82  LLREGKVKLLTPREAGYAISLSNKPLLDVRPSSERNKAWIKGSTWVPIFDNDDNLDAGTL 141

Query: 143 ARRA-AFAFFGIFSGTEE---NPEFLQSVESKIAKDAKIIVACSSGGTMKPTQNLPEGQQ 202
           +++  +FA  G +SG      N  FL  VE K  KD+++IVAC  G              
Sbjct: 142 SKKVTSFAMGGWWSGAPTLSFNRLFLSKVEEKFPKDSELIVACQKG-------------- 201

Query: 203 SRSLIAAYLLVLNGYNNVFHLEGGL 224
            RSL A  LL   GY N+F ++GGL
Sbjct: 202 LRSLAACELLYNAGYENLFWVQGGL 212

BLAST of CmoCh16G000360 vs. NCBI nr
Match: gi|449457001|ref|XP_004146237.1| (PREDICTED: rhodanese-like domain-containing protein 14, chloroplastic [Cucumis sativus])

HSP 1 Score: 440.3 bits (1131), Expect = 2.2e-120
Identity = 222/237 (93.67%), Postives = 227/237 (95.78%), Query Frame = 1

Query: 1   MAAFAPLPLTSPSLHPVVQFSPLVFSSKVLYDPSSHCLTVGSIRPARQKFTSQTNPRSLI 60
           MAAFA LPLTS SLHPVVQFSPLVFSSKV+YDPSS+C TV SIR   QKF+SQ+NPRSLI
Sbjct: 1   MAAFASLPLTSSSLHPVVQFSPLVFSSKVVYDPSSYCFTVRSIRYGNQKFSSQSNPRSLI 60

Query: 61  ILGAATKRAKTPAEEDWKVKRELLLQKRVRSVDANEALRLQKENNFVILDVRPEAEFKEG 120
           ILGAATK+AKTPAEEDWKVKRELLLQKRVRSVDANEALRLQKENNFVILDVRPEAEFKEG
Sbjct: 61  ILGAATKQAKTPAEEDWKVKRELLLQKRVRSVDANEALRLQKENNFVILDVRPEAEFKEG 120

Query: 121 HPPGAINVQIYRLIKEWTAWDIARRAAFAFFGIFSGTEENPEFLQSVESKIAKDAKIIVA 180
           HPPGAINVQIYRLIKEWTAWDIARRAAFAFFGIFSGTEENPEFLQSVESKI KDAKIIVA
Sbjct: 121 HPPGAINVQIYRLIKEWTAWDIARRAAFAFFGIFSGTEENPEFLQSVESKIDKDAKIIVA 180

Query: 181 CSSGGTMKPTQNLPEGQQSRSLIAAYLLVLNGYNNVFHLEGGLYNWFKEGLPVDSEE 238
           CSSGGTMKPTQNLPEGQQSRSLIAAYLLVLNGY NVFHLEGGLYNWFKEGLPV SEE
Sbjct: 181 CSSGGTMKPTQNLPEGQQSRSLIAAYLLVLNGYANVFHLEGGLYNWFKEGLPVVSEE 237

BLAST of CmoCh16G000360 vs. NCBI nr
Match: gi|659111966|ref|XP_008456000.1| (PREDICTED: rhodanese-like domain-containing protein 14, chloroplastic [Cucumis melo])

HSP 1 Score: 427.9 bits (1099), Expect = 1.1e-116
Identity = 217/237 (91.56%), Postives = 223/237 (94.09%), Query Frame = 1

Query: 1   MAAFAPLPLTSPSLHPVVQFSPLVFSSKVLYDPSSHCLTVGSIRPARQKFTSQTNPRSLI 60
           MAAFA LPLTS SLH VVQFSPLVFSSKV+YDPSS+C TV SI    Q F SQTNPRSLI
Sbjct: 1   MAAFASLPLTSSSLHSVVQFSPLVFSSKVVYDPSSYCFTVRSIGFGNQNFFSQTNPRSLI 60

Query: 61  ILGAATKRAKTPAEEDWKVKRELLLQKRVRSVDANEALRLQKENNFVILDVRPEAEFKEG 120
           ILGAATK+AKTPAEEDWKVKRELLLQKRVRSVDANEALRLQKENNFVILDVRPEAEFKEG
Sbjct: 61  ILGAATKQAKTPAEEDWKVKRELLLQKRVRSVDANEALRLQKENNFVILDVRPEAEFKEG 120

Query: 121 HPPGAINVQIYRLIKEWTAWDIARRAAFAFFGIFSGTEENPEFLQSVESKIAKDAKIIVA 180
           HPPGAINVQIYRLIKEWTAWDIARRAAFAFFGIF+GTEENPEFLQSVES+I K+AKIIVA
Sbjct: 121 HPPGAINVQIYRLIKEWTAWDIARRAAFAFFGIFAGTEENPEFLQSVESQIDKNAKIIVA 180

Query: 181 CSSGGTMKPTQNLPEGQQSRSLIAAYLLVLNGYNNVFHLEGGLYNWFKEGLPVDSEE 238
           CSSGGTMKPTQNLPEGQQSRSLIAAYLLVLNGY NVFHLEGGLYNWFKEGLPV SEE
Sbjct: 181 CSSGGTMKPTQNLPEGQQSRSLIAAYLLVLNGYANVFHLEGGLYNWFKEGLPVVSEE 237

BLAST of CmoCh16G000360 vs. NCBI nr
Match: gi|224135067|ref|XP_002321975.1| (rhodanese-like domain-containing family protein [Populus trichocarpa])

HSP 1 Score: 354.8 bits (909), Expect = 1.2e-94
Identity = 177/229 (77.29%), Postives = 194/229 (84.72%), Query Frame = 1

Query: 8   PLTSPSLHPVVQFSPLVFSSKVLYDPSSHCLTVGSIRPARQKFTSQTNPRSLIILGAATK 67
           P +S SL+P  Q SPL+FSSK   DPS    TV S    R + +S T PR L +  AATK
Sbjct: 10  PSSSSSLYPNYQSSPLIFSSKTAQDPSLPFFTVRSNGSLRGRSSSCTVPRGLRVFNAATK 69

Query: 68  RAKTPAEEDWKVKRELLLQKRVRSVDANEALRLQKENNFVILDVRPEAEFKEGHPPGAIN 127
            AK+PAEEDWK KRE+LLQK+VRSVD  EALRLQKENNFVILDVRPEAEFKE HPPGAIN
Sbjct: 70  PAKSPAEEDWKTKREVLLQKKVRSVDVKEALRLQKENNFVILDVRPEAEFKEAHPPGAIN 129

Query: 128 VQIYRLIKEWTAWDIARRAAFAFFGIFSGTEENPEFLQSVESKIAKDAKIIVACSSGGTM 187
           VQ+YRLIKEWTAWDIARRAAFAFFGIF+GTEENPEF+Q+VESKI K AKIIVACS+GGTM
Sbjct: 130 VQVYRLIKEWTAWDIARRAAFAFFGIFAGTEENPEFMQTVESKIDKSAKIIVACSAGGTM 189

Query: 188 KPTQNLPEGQQSRSLIAAYLLVLNGYNNVFHLEGGLYNWFKEGLPVDSE 237
           +P+QNLPEGQQSRSLIAAYLLVLNGY NVFHLEGGLY WFKEGLP +SE
Sbjct: 190 RPSQNLPEGQQSRSLIAAYLLVLNGYTNVFHLEGGLYKWFKEGLPAESE 238

BLAST of CmoCh16G000360 vs. NCBI nr
Match: gi|568877237|ref|XP_006491648.1| (PREDICTED: rhodanese-like domain-containing protein 14, chloroplastic isoform X2 [Citrus sinensis])

HSP 1 Score: 352.8 bits (904), Expect = 4.6e-94
Identity = 177/225 (78.67%), Postives = 195/225 (86.67%), Query Frame = 1

Query: 13  SLHPVVQFSPLVFSSKVLYDPSSHCLTVGSIRPARQKFTSQTNPRSLIILGAATKRAKTP 72
           SL+P  + SPL+ + K   D +  CLTV S   +R++ +SQ+ PR LII  AATK AK+P
Sbjct: 16  SLYPNYRSSPLILAPKTNQDTTICCLTVRSFTFSRRRLSSQSVPRGLIIQNAATKPAKSP 75

Query: 73  AEEDWKVKRELLLQKRVRSVDANEALRLQKENNFVILDVRPEAEFKEGHPPGAINVQIYR 132
           AEEDWK KRELLLQKRVRSV+A EALRLQKENNFVILDVRPEAEFKE HPPGAINVQIYR
Sbjct: 76  AEEDWKTKRELLLQKRVRSVEAKEALRLQKENNFVILDVRPEAEFKEAHPPGAINVQIYR 135

Query: 133 LIKEWTAWDIARRAAFAFFGIFSGTEENPEFLQSVESKIAKDAKIIVACSSGGTMKPTQN 192
           LIKEWTAWDIARRAAFAFFGIFSGTEENPEFLQSVES++ KDAKIIVAC++GGTMKP+QN
Sbjct: 136 LIKEWTAWDIARRAAFAFFGIFSGTEENPEFLQSVESQLDKDAKIIVACATGGTMKPSQN 195

Query: 193 LPEGQQSRSLIAAYLLVLNGYNNVFHLEGGLYNWFKEGLPVDSEE 238
           LPEGQQSRSLIAAYLLVLNGY NV+HLEGGLY WFKE LP  SEE
Sbjct: 196 LPEGQQSRSLIAAYLLVLNGYKNVYHLEGGLYKWFKEELPEVSEE 240

BLAST of CmoCh16G000360 vs. NCBI nr
Match: gi|567897390|ref|XP_006441183.1| (hypothetical protein CICLE_v10021946mg [Citrus clementina])

HSP 1 Score: 352.8 bits (904), Expect = 4.6e-94
Identity = 177/225 (78.67%), Postives = 195/225 (86.67%), Query Frame = 1

Query: 13  SLHPVVQFSPLVFSSKVLYDPSSHCLTVGSIRPARQKFTSQTNPRSLIILGAATKRAKTP 72
           SL+P  + SPL+ + K   D +  CLTV S   +R++ +SQ+ PR LII  AATK AK+P
Sbjct: 16  SLYPNYRSSPLILAPKTNQDTTLCCLTVRSFTFSRRRLSSQSVPRGLIIQNAATKPAKSP 75

Query: 73  AEEDWKVKRELLLQKRVRSVDANEALRLQKENNFVILDVRPEAEFKEGHPPGAINVQIYR 132
           AEEDWK KRELLLQKRVRSV+A EALRLQKENNFVILDVRPEAEFKE HPPGAINVQIYR
Sbjct: 76  AEEDWKTKRELLLQKRVRSVEAKEALRLQKENNFVILDVRPEAEFKEAHPPGAINVQIYR 135

Query: 133 LIKEWTAWDIARRAAFAFFGIFSGTEENPEFLQSVESKIAKDAKIIVACSSGGTMKPTQN 192
           LIKEWTAWDIARRAAFAFFGIFSGTEENPEFLQSVES++ KDAKIIVAC++GGTMKP+QN
Sbjct: 136 LIKEWTAWDIARRAAFAFFGIFSGTEENPEFLQSVESQLDKDAKIIVACATGGTMKPSQN 195

Query: 193 LPEGQQSRSLIAAYLLVLNGYNNVFHLEGGLYNWFKEGLPVDSEE 238
           LPEGQQSRSLIAAYLLVLNGY NV+HLEGGLY WFKE LP  SEE
Sbjct: 196 LPEGQQSRSLIAAYLLVLNGYKNVYHLEGGLYKWFKEELPEVSEE 240

The following BLAST results are available for this feature:
Match NameE-valueIdentityDescription
STR14_ARATH2.4e-7979.56Rhodanese-like domain-containing protein 14, chloroplastic OS=Arabidopsis thalia... [more]
STR9_ARATH1.0e-0826.78Rhodanese-like domain-containing protein 9, chloroplastic OS=Arabidopsis thalian... [more]
STR11_ARATH1.1e-0732.41Rhodanese-like domain-containing protein 11, chloroplastic OS=Arabidopsis thalia... [more]
STR18_ARATH4.7e-0629.14Thiosulfate sulfurtransferase 18 OS=Arabidopsis thaliana GN=STR18 PE=1 SV=1[more]
Match NameE-valueIdentityDescription
A0A0A0LC69_CUCSA1.5e-12093.67Uncharacterized protein OS=Cucumis sativus GN=Csa_3G238120 PE=4 SV=1[more]
B9IDL2_POPTR8.4e-9577.29Rhodanese-like domain-containing family protein OS=Populus trichocarpa GN=POPTR_... [more]
A0A067EX39_CITSI3.2e-9478.67Uncharacterized protein OS=Citrus sinensis GN=CISIN_1g026264mg PE=4 SV=1[more]
V4T2K2_9ROSI3.2e-9478.67Uncharacterized protein OS=Citrus clementina GN=CICLE_v10021946mg PE=4 SV=1[more]
J7FWP1_ROSRU1.2e-9379.04Rhodanese-like domain-containing protein OS=Rosa rugosa PE=4 SV=1[more]
Match NameE-valueIdentityDescription
AT4G27700.11.4e-8079.56 Rhodanese/Cell cycle control phosphatase superfamily protein[more]
AT2G42220.15.7e-1026.78 Rhodanese/Cell cycle control phosphatase superfamily protein[more]
AT4G24750.16.3e-0932.41 Rhodanese/Cell cycle control phosphatase superfamily protein[more]
Match NameE-valueIdentityDescription
gi|449457001|ref|XP_004146237.1|2.2e-12093.67PREDICTED: rhodanese-like domain-containing protein 14, chloroplastic [Cucumis s... [more]
gi|659111966|ref|XP_008456000.1|1.1e-11691.56PREDICTED: rhodanese-like domain-containing protein 14, chloroplastic [Cucumis m... [more]
gi|224135067|ref|XP_002321975.1|1.2e-9477.29rhodanese-like domain-containing family protein [Populus trichocarpa][more]
gi|568877237|ref|XP_006491648.1|4.6e-9478.67PREDICTED: rhodanese-like domain-containing protein 14, chloroplastic isoform X2... [more]
gi|567897390|ref|XP_006441183.1|4.6e-9478.67hypothetical protein CICLE_v10021946mg [Citrus clementina][more]
The following terms have been associated with this gene:
Vocabulary: INTERPRO
TermDefinition
IPR001763Rhodanese-like_dom
GO Assignments
This gene is annotated with the following GO terms.
Category Term Accession Term Name
biological_process GO:0000023 maltose metabolic process
biological_process GO:0006098 pentose-phosphate shunt
biological_process GO:0043085 positive regulation of catalytic activity
biological_process GO:0019252 starch biosynthetic process
biological_process GO:0008150 biological_process
cellular_component GO:0009941 chloroplast envelope
cellular_component GO:0009535 chloroplast thylakoid membrane
cellular_component GO:0005575 cellular_component
molecular_function GO:0016740 transferase activity
molecular_function GO:0003674 molecular_function

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
CmoCh16G000360.1CmoCh16G000360.1mRNA


Analysis Name: InterPro Annotations of Cucurbita moschata
Date Performed: 2017-05-19
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR001763Rhodanese-like domainGENE3DG3DSA:3.40.250.10coord: 90..233
score: 1.4
IPR001763Rhodanese-like domainPFAMPF00581Rhodanesecoord: 94..227
score: 2.9
IPR001763Rhodanese-like domainSMARTSM00450rhod_4coord: 92..232
score: 4.1
IPR001763Rhodanese-like domainPROFILEPS50206RHODANESE_3coord: 102..235
score: 19
IPR001763Rhodanese-like domainunknownSSF52821Rhodanese/Cell cycle control phosphatasecoord: 87..233
score: 7.46
NoneNo IPR availablePANTHERPTHR12231CTX-RELATED TYPE I TRANSMEMBRANE PROTEINcoord: 81..127
score: 4.0E-63coord: 147..237
score: 4.0
NoneNo IPR availablePANTHERPTHR12231:SF112RHODANESE-LIKE DOMAIN-CONTAINING PROTEIN 14, CHLOROPLASTICcoord: 147..237
score: 4.0E-63coord: 81..127
score: 4.0

The following gene(s) are paralogous to this gene:

None