CmaCh16G000310 (gene) Cucurbita maxima (Rimu)
The following sequences are available for this feature:
Legend: exonfive_prime_UTRCDSthree_prime_UTR Hold the cursor over a type above to highlight its positions in the sequence below.CAGAAATCTAAATCCGCAATCACTTGCCCCACAAGCTCTCAAATATCTACCCGTGCTGAGTAGGTGGAAGAATACAATTATACATAAGCATCGACATCATATGTTGGGCATTTTCTTTTAGTTGATTTCACTGGACGAAGATCCTAAAGATGGCTGCTTTTGCCCCGCTGCCGTTAACTTCGCCTTCTTTACATCCTGTTGTCCAATTCTCACCTCTTGTGTTCTCCTCAAAAGTTCTATATGACCCAAGTTCCCATTGCCTCACCGTCGGATCAATAAGACATGCAAGGCAAAAATTCACCTCCCAGACTAACCCGAGGAGCCTGATAATCCTTGGTGCAGCAACAAAAAGAGCAAAAACACCAGGTATTCTCTTCTAGTTGATCTAATATTTAATCAGACAGTGCTCTTTTTCCAGGTAATATGGTAGAAATTTCAATCTTTTTAGTTTTAATTCACTAGCATAAAAGTGGGTTTATTCTCGTCTATCTGGAGGATTCAGCTGAAGAGGATTGGAAGGTGAAGAGGGAACTTCTGCTGCAGAAAAGGGTTCGACTCTCTATCCACCTCTCGAGTGTATATTGGATGAGTGTTCGGTTTCATTAATCTAAAACTACATGGAAACACATTACACTTGTTTTCGTCACAAGATCCGAGTTTTGGTCATAACAAAGCTTGAAATTTTATGAACATGAGAATTAAGATCTTTACTGCAGGTTAGGAGTGTGGATGCGAATGAAGCTCTGCGCCTTCAGAAGGAAAATAACTTCGTGATTCTTGATGTGAGGCCAGAAGCAGAATTCAAAGAGGTTAGTAGAGTATTTTTTTTCTTTAAGTCTAGAACAACCAATGAAATGTTACATCTTATTTCCACTTTTTGGTGTAGGGCCATCCACCAGGGGCCATTAATGTGCAAATTTACAGGCTGATAAAGGAGTGGACAGCATGGGACATAGCCAGGCGAGCTGCATTTGCATTTTTTGGCATCTTTTCGGGTACAGAAGAAAACCCAGAATTCTTGCAAAGTAAGTTGCTTATGAACACCTTCTTCACTTGACGCCTTGTTCTCAAGTGATATGGAGAAGTGAATGACCGAGTGTATTCTACAGGTGTAGAATCTAAAATAGCTAAAGATGCCAAAATAATAGTAGCATGCTCATCAGGTGGAACAATGAAACCTACCCAGAATCTTCCAGAAGGTCAACAATCAAGGTACTCGAGCTCTTGACAGTAACTTTTTGAGTTTTCTCAACTTTGCAGAGTAATATGCATATTATATGAGCATTACATGTTTTTTTTTTATATTTTACAAGTATCACTCATCGTTTGGTTAACACTGTTCAACGGGTTGAACAGTGCAAACAATGATTTGTTCAACGAGTATTAACAAGATGAAGAATCAATAAGATGAATCTGCAGTCCAAAATCGCATGTGCCTTCTGTTTCTTGCTTGAGGTTTATTTGCTTTTTCACTGCAATTGGAAAATAAGTTTTAAGTTTTGACGCTTTTAACAGGTCATTGATAGCAGCCTACTTGTTGGTTCTCAATGGCTACACCAATGTATTTCATTTAGAAGGTGGTCTCTATAATTGGTTCAAAGAAGGATTGCCTGTAGATTCAGAAGAGTAAGATGGTCTCTACAAGATTTTCGGAAGTAAAATAGGTTGTCATTTTTGGTGGGCGCCCCATTAGAGAGCAGAGCCAAGTGCTCTGGCAAGACTTGCTTGGGTTGTGAGTGTTAACCACTACAGCATCCCCAGGATCCTCCTTTGTAAATGTTCAATTATAAGTTGGACAGAATGGAAGACTAGATTTTGTTTCACTGCGGAAATACCCATTCCCGTTTGATGTTTAGTTTGCAATGAAAAATGTGTATGCATAAGTTTTCGCTGTAATGCTGCAACTATTATGATATTCCAGTTGAGGTATTGAACTCATAAATCTGTAAATTCGTTCAGCTTATTAAAAGCTAGAAGATTGTATGTCCTATGAATCACAGTCACCGAAACTTATCAGTTATCAGGCAGTAGGACTGGG CAGAAATCTAAATCCGCAATCACTTGCCCCACAAGCTCTCAAATATCTACCCGTGCTGAGTAGGTGGAAGAATACAATTATACATAAGCATCGACATCATATGTTGGGCATTTTCTTTTAGTTGATTTCACTGGACGAAGATCCTAAAGATGGCTGCTTTTGCCCCGCTGCCGTTAACTTCGCCTTCTTTACATCCTGTTGTCCAATTCTCACCTCTTGTGTTCTCCTCAAAAGTTCTATATGACCCAAGTTCCCATTGCCTCACCGTCGGATCAATAAGACATGCAAGGCAAAAATTCACCTCCCAGACTAACCCGAGGAGCCTGATAATCCTTGGTGCAGCAACAAAAAGAGCAAAAACACCAGCTGAAGAGGATTGGAAGGTGAAGAGGGAACTTCTGCTGCAGAAAAGGGTTAGGAGTGTGGATGCGAATGAAGCTCTGCGCCTTCAGAAGGAAAATAACTTCGTGATTCTTGATGTGAGGCCAGAAGCAGAATTCAAAGAGGGCCATCCACCAGGGGCCATTAATGTGCAAATTTACAGGCTGATAAAGGAGTGGACAGCATGGGACATAGCCAGGCGAGCTGCATTTGCATTTTTTGGCATCTTTTCGGGTACAGAAGAAAACCCAGAATTCTTGCAAAGTGTAGAATCTAAAATAGCTAAAGATGCCAAAATAATAGTAGCATGCTCATCAGGTGGAACAATGAAACCTACCCAGAATCTTCCAGAAGGTCAACAATCAAGGTCATTGATAGCAGCCTACTTGTTGGTTCTCAATGGCTACACCAATGTATTTCATTTAGAAGGTGGTCTCTATAATTGGTTCAAAGAAGGATTGCCTGTAGATTCAGAAGAGTAAGATGGTCTCTACAAGATTTTCGGAAGTAAAATAGGTTGTCATTTTTGGTGGGCGCCCCATTAGAGAGCAGAGCCAAGTGCTCTGGCAAGACTTGCTTGGGTTGTGAGTGTTAACCACTACAGCATCCCCAGGATCCTCCTTTGTAAATGTTCAATTATAAGTTGGACAGAATGGAAGACTAGATTTTGTTTCACTGCGGAAATACCCATTCCCGTTTGATGTTTAGTTTGCAATGAAAAATGTGTATGCATAAGTTTTCGCTGTAATGCTGCAACTATTATGATATTCCAGTTGAGGTATTGAACTCATAAATCTGTAAATTCGTTCAGCTTATTAAAAGCTAGAAGATTGTATGTCCTATGAATCACAGTCACCGAAACTTATCAGTTATCAGGCAGTAGGACTGGG ATGGCTGCTTTTGCCCCGCTGCCGTTAACTTCGCCTTCTTTACATCCTGTTGTCCAATTCTCACCTCTTGTGTTCTCCTCAAAAGTTCTATATGACCCAAGTTCCCATTGCCTCACCGTCGGATCAATAAGACATGCAAGGCAAAAATTCACCTCCCAGACTAACCCGAGGAGCCTGATAATCCTTGGTGCAGCAACAAAAAGAGCAAAAACACCAGCTGAAGAGGATTGGAAGGTGAAGAGGGAACTTCTGCTGCAGAAAAGGGTTAGGAGTGTGGATGCGAATGAAGCTCTGCGCCTTCAGAAGGAAAATAACTTCGTGATTCTTGATGTGAGGCCAGAAGCAGAATTCAAAGAGGGCCATCCACCAGGGGCCATTAATGTGCAAATTTACAGGCTGATAAAGGAGTGGACAGCATGGGACATAGCCAGGCGAGCTGCATTTGCATTTTTTGGCATCTTTTCGGGTACAGAAGAAAACCCAGAATTCTTGCAAAGTGTAGAATCTAAAATAGCTAAAGATGCCAAAATAATAGTAGCATGCTCATCAGGTGGAACAATGAAACCTACCCAGAATCTTCCAGAAGGTCAACAATCAAGGTCATTGATAGCAGCCTACTTGTTGGTTCTCAATGGCTACACCAATGTATTTCATTTAGAAGGTGGTCTCTATAATTGGTTCAAAGAAGGATTGCCTGTAGATTCAGAAGAGTAA MAAFAPLPLTSPSLHPVVQFSPLVFSSKVLYDPSSHCLTVGSIRHARQKFTSQTNPRSLIILGAATKRAKTPAEEDWKVKRELLLQKRVRSVDANEALRLQKENNFVILDVRPEAEFKEGHPPGAINVQIYRLIKEWTAWDIARRAAFAFFGIFSGTEENPEFLQSVESKIAKDAKIIVACSSGGTMKPTQNLPEGQQSRSLIAAYLLVLNGYTNVFHLEGGLYNWFKEGLPVDSEE
BLAST of CmaCh16G000310 vs. Swiss-Prot
Match: STR14_ARATH (Rhodanese-like domain-containing protein 14, chloroplastic OS=Arabidopsis thaliana GN=At4g27700 PE=2 SV=1) HSP 1 Score: 296.2 bits (757), Expect = 3.2e-79 Identity = 144/181 (79.56%), Postives = 160/181 (88.40%), Query Frame = 1
BLAST of CmaCh16G000310 vs. Swiss-Prot
Match: STR9_ARATH (Rhodanese-like domain-containing protein 9, chloroplastic OS=Arabidopsis thaliana GN=STR9 PE=2 SV=1) HSP 1 Score: 61.6 bits (148), Expect = 1.3e-08 Identity = 41/148 (27.70%), Postives = 73/148 (49.32%), Query Frame = 1
BLAST of CmaCh16G000310 vs. Swiss-Prot
Match: STR11_ARATH (Rhodanese-like domain-containing protein 11, chloroplastic OS=Arabidopsis thaliana GN=STR11 PE=2 SV=1) HSP 1 Score: 58.2 bits (139), Expect = 1.5e-07 Identity = 47/145 (32.41%), Postives = 69/145 (47.59%), Query Frame = 1
BLAST of CmaCh16G000310 vs. Swiss-Prot
Match: STR18_ARATH (Thiosulfate sulfurtransferase 18 OS=Arabidopsis thaliana GN=STR18 PE=1 SV=1) HSP 1 Score: 52.8 bits (125), Expect = 6.1e-06 Identity = 44/151 (29.14%), Postives = 63/151 (41.72%), Query Frame = 1
BLAST of CmaCh16G000310 vs. TrEMBL
Match: A0A0A0LC69_CUCSA (Uncharacterized protein OS=Cucumis sativus GN=Csa_3G238120 PE=4 SV=1) HSP 1 Score: 443.4 bits (1139), Expect = 1.8e-121 Identity = 222/237 (93.67%), Postives = 228/237 (96.20%), Query Frame = 1
BLAST of CmaCh16G000310 vs. TrEMBL
Match: B9IDL2_POPTR (Rhodanese-like domain-containing family protein OS=Populus trichocarpa GN=POPTR_0015s01040g PE=4 SV=1) HSP 1 Score: 356.7 bits (914), Expect = 2.2e-95 Identity = 178/229 (77.73%), Postives = 195/229 (85.15%), Query Frame = 1
BLAST of CmaCh16G000310 vs. TrEMBL
Match: A0A067EX39_CITSI (Uncharacterized protein OS=Citrus sinensis GN=CISIN_1g026264mg PE=4 SV=1) HSP 1 Score: 353.6 bits (906), Expect = 1.9e-94 Identity = 177/225 (78.67%), Postives = 195/225 (86.67%), Query Frame = 1
BLAST of CmaCh16G000310 vs. TrEMBL
Match: V4T2K2_9ROSI (Uncharacterized protein OS=Citrus clementina GN=CICLE_v10021946mg PE=4 SV=1) HSP 1 Score: 353.6 bits (906), Expect = 1.9e-94 Identity = 177/225 (78.67%), Postives = 195/225 (86.67%), Query Frame = 1
BLAST of CmaCh16G000310 vs. TrEMBL
Match: J7FWP1_ROSRU (Rhodanese-like domain-containing protein OS=Rosa rugosa PE=4 SV=1) HSP 1 Score: 353.2 bits (905), Expect = 2.4e-94 Identity = 182/229 (79.48%), Postives = 199/229 (86.90%), Query Frame = 1
BLAST of CmaCh16G000310 vs. TAIR10
Match: AT4G27700.1 (AT4G27700.1 Rhodanese/Cell cycle control phosphatase superfamily protein) HSP 1 Score: 296.2 bits (757), Expect = 1.8e-80 Identity = 144/181 (79.56%), Postives = 160/181 (88.40%), Query Frame = 1
BLAST of CmaCh16G000310 vs. TAIR10
Match: AT2G42220.1 (AT2G42220.1 Rhodanese/Cell cycle control phosphatase superfamily protein) HSP 1 Score: 61.6 bits (148), Expect = 7.4e-10 Identity = 41/148 (27.70%), Postives = 73/148 (49.32%), Query Frame = 1
BLAST of CmaCh16G000310 vs. TAIR10
Match: AT4G24750.1 (AT4G24750.1 Rhodanese/Cell cycle control phosphatase superfamily protein) HSP 1 Score: 58.2 bits (139), Expect = 8.2e-09 Identity = 47/145 (32.41%), Postives = 69/145 (47.59%), Query Frame = 1
BLAST of CmaCh16G000310 vs. NCBI nr
Match: gi|449457001|ref|XP_004146237.1| (PREDICTED: rhodanese-like domain-containing protein 14, chloroplastic [Cucumis sativus]) HSP 1 Score: 443.4 bits (1139), Expect = 2.6e-121 Identity = 222/237 (93.67%), Postives = 228/237 (96.20%), Query Frame = 1
BLAST of CmaCh16G000310 vs. NCBI nr
Match: gi|659111966|ref|XP_008456000.1| (PREDICTED: rhodanese-like domain-containing protein 14, chloroplastic [Cucumis melo]) HSP 1 Score: 430.3 bits (1105), Expect = 2.3e-117 Identity = 217/237 (91.56%), Postives = 223/237 (94.09%), Query Frame = 1
BLAST of CmaCh16G000310 vs. NCBI nr
Match: gi|224135067|ref|XP_002321975.1| (rhodanese-like domain-containing family protein [Populus trichocarpa]) HSP 1 Score: 356.7 bits (914), Expect = 3.2e-95 Identity = 178/229 (77.73%), Postives = 195/229 (85.15%), Query Frame = 1
BLAST of CmaCh16G000310 vs. NCBI nr
Match: gi|743902707|ref|XP_011044698.1| (PREDICTED: rhodanese-like domain-containing protein 14, chloroplastic [Populus euphratica]) HSP 1 Score: 354.8 bits (909), Expect = 1.2e-94 Identity = 177/230 (76.96%), Postives = 195/230 (84.78%), Query Frame = 1
BLAST of CmaCh16G000310 vs. NCBI nr
Match: gi|568877237|ref|XP_006491648.1| (PREDICTED: rhodanese-like domain-containing protein 14, chloroplastic isoform X2 [Citrus sinensis]) HSP 1 Score: 353.6 bits (906), Expect = 2.7e-94 Identity = 177/225 (78.67%), Postives = 195/225 (86.67%), Query Frame = 1
The following BLAST results are available for this feature:
The following terms have been associated with this gene:
GO Assignments
This gene is annotated with the following GO terms.
The following mRNA feature(s) are a part of this gene:
Analysis Name: InterPro Annotations of Cucurbita maxima
Date Performed: 2017-05-20
The following gene(s) are orthologous to this gene:
The following gene(s) are paralogous to this gene: None The following block(s) are covering this gene: |