CsGy3G019000 (gene) Cucumber (Gy14) v2
The following sequences are available for this feature:
Legend: CDSexon Hold the cursor over a type above to highlight its positions in the sequence below.ATGGATTGCCCTGGAATGCCCAACTTTTCTTGCTTGGAGGAATCCGGTTCAGGGGATGAGACATCGACGAGGGTTGAACGTTTGGAGAAGGGCATGTGTGGGAGAAGTAGGCATATTTTCTTTAGAGGTGTTACTACGATTGTTACTAAGTTGTTCAATATTGTGGAACTCGATGTTGCAGTGTTTGAGAAGAAGGATTATCAACAATGGCTGGATTATCAGGTGGATGGCGAGTCTTTGTAAGAATGTGAATGATTTTGATTTTCATATTTGTTTTGAGCTTAAAATTCATTGTTTTTCATCTGAATTCCTAACTTGATAATTCAATTCTATTATTTATGAACTTAATTTGCATTACTCTAGTCAGAGAGCACTAAATCTTCCATGTTTGCAAAACTATCATCTAAACTTGAAAAACTTCTTTCATCAATACCATTAGATGAACGGGTATTTGAGTCTCAAGAATACTAAATATTTCAGGTGTACAATATGCCCTGCAGGAGATAGCTTTAACTCCTGTTCCTTCAACTTCATTTAGTTCTGTTCTAAATGGTTTAAATTTTGGGTTGGGCAACAAGCTTCTTGGATGA ATGGATTGCCCTGGAATGCCCAACTTTTCTTGCTTGGAGGAATCCGGTTCAGGGGATGAGACATCGACGAGGGTTGAACGTTTGGAGAAGGGCATGTGTGGGAGAAGTAGGCATATTTTCTTTAGAGGTGTTACTACGATTGTTACTAAGTTGTTCAATATTGTGGAACTCGATGTTGCAGTGTTTGAGAAGAAGGATTATCAACAATGGCTGGATTATCAGGAGATAGCTTTAACTCCTGTTCCTTCAACTTCATTTAGTTCTGTTCTAAATGGTTTAAATTTTGGGTTGGGCAACAAGCTTCTTGGATGA ATGGATTGCCCTGGAATGCCCAACTTTTCTTGCTTGGAGGAATCCGGTTCAGGGGATGAGACATCGACGAGGGTTGAACGTTTGGAGAAGGGCATGTGTGGGAGAAGTAGGCATATTTTCTTTAGAGGTGTTACTACGATTGTTACTAAGTTGTTCAATATTGTGGAACTCGATGTTGCAGTGTTTGAGAAGAAGGATTATCAACAATGGCTGGATTATCAGGAGATAGCTTTAACTCCTGTTCCTTCAACTTCATTTAGTTCTGTTCTAAATGGTTTAAATTTTGGGTTGGGCAACAAGCTTCTTGGATGA MDCPGMPNFSCLEESGSGDETSTRVERLEKGMCGRSRHIFFRGVTTIVTKLFNIVELDVAVFEKKDYQQWLDYQEIALTPVPSTSFSSVLNGLNFGLGNKLLG
BLAST of CsGy3G019000 vs. NCBI nr
Match: KGN57599.1 (hypothetical protein Csa_3G223300 [Cucumis sativus]) HSP 1 Score: 127.1 bits (318), Expect = 3.5e-26 Identity = 61/69 (88.41%), Postives = 63/69 (91.30%), Query Frame = 0
BLAST of CsGy3G019000 vs. NCBI nr
Match: KGN58349.1 (hypothetical protein Csa_3G625640 [Cucumis sativus]) HSP 1 Score: 119.4 bits (298), Expect = 7.2e-24 Identity = 56/70 (80.00%), Postives = 60/70 (85.71%), Query Frame = 0
BLAST of CsGy3G019000 vs. NCBI nr
Match: XP_004152022.2 (PREDICTED: LOW QUALITY PROTEIN: pantoate--beta-alanine ligase [Cucumis sativus]) HSP 1 Score: 119.4 bits (298), Expect = 7.2e-24 Identity = 56/70 (80.00%), Postives = 60/70 (85.71%), Query Frame = 0
BLAST of CsGy3G019000 vs. NCBI nr
Match: KGN47876.1 (hypothetical protein Csa_6G409330 [Cucumis sativus]) HSP 1 Score: 117.1 bits (292), Expect = 3.6e-23 Identity = 55/70 (78.57%), Postives = 59/70 (84.29%), Query Frame = 0
BLAST of CsGy3G019000 vs. NCBI nr
Match: XP_004140085.2 (PREDICTED: LOW QUALITY PROTEIN: pantoate--beta-alanine ligase-like [Cucumis sativus]) HSP 1 Score: 117.1 bits (292), Expect = 3.6e-23 Identity = 55/70 (78.57%), Postives = 59/70 (84.29%), Query Frame = 0
BLAST of CsGy3G019000 vs. TAIR10
Match: AT5G48840.1 (homolog of bacterial PANC) HSP 1 Score: 98.6 bits (244), Expect = 2.4e-21 Identity = 47/61 (77.05%), Postives = 51/61 (83.61%), Query Frame = 0
BLAST of CsGy3G019000 vs. Swiss-Prot
Match: sp|Q9FKB3|PANC_ARATH (Pantoate--beta-alanine ligase OS=Arabidopsis thaliana OX=3702 GN=At5g48840 PE=1 SV=1) HSP 1 Score: 98.6 bits (244), Expect = 4.3e-20 Identity = 47/61 (77.05%), Postives = 51/61 (83.61%), Query Frame = 0
BLAST of CsGy3G019000 vs. Swiss-Prot
Match: sp|O24210|PANC_ORYSJ (Pantoate--beta-alanine ligase OS=Oryza sativa subsp. japonica OX=39947 GN=PANC PE=2 SV=2) HSP 1 Score: 96.7 bits (239), Expect = 1.6e-19 Identity = 48/62 (77.42%), Postives = 52/62 (83.87%), Query Frame = 0
BLAST of CsGy3G019000 vs. Swiss-Prot
Match: sp|O24035|PANC_LOTJA (Pantoate--beta-alanine ligase OS=Lotus japonicus OX=34305 GN=PANC PE=1 SV=3) HSP 1 Score: 91.3 bits (225), Expect = 6.9e-18 Identity = 46/70 (65.71%), Postives = 53/70 (75.71%), Query Frame = 0
BLAST of CsGy3G019000 vs. Swiss-Prot
Match: sp|A4XYC5|PANC_PSEMY (Pantothenate synthetase OS=Pseudomonas mendocina (strain ymp) OX=399739 GN=panC PE=3 SV=1) HSP 1 Score: 65.1 bits (157), Expect = 5.3e-10 Identity = 31/63 (49.21%), Postives = 43/63 (68.25%), Query Frame = 0
BLAST of CsGy3G019000 vs. Swiss-Prot
Match: sp|Q3A3I7|PANC_PELCD (Pantothenate synthetase OS=Pelobacter carbinolicus (strain DSM 2380 / NBRC 103641 / GraBd1) OX=338963 GN=panC PE=3 SV=1) HSP 1 Score: 62.0 bits (149), Expect = 4.5e-09 Identity = 30/53 (56.60%), Postives = 39/53 (73.58%), Query Frame = 0
BLAST of CsGy3G019000 vs. TrEMBL
Match: tr|A0A0A0L9F0|A0A0A0L9F0_CUCSA (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_3G223300 PE=4 SV=1) HSP 1 Score: 127.1 bits (318), Expect = 2.3e-26 Identity = 61/69 (88.41%), Postives = 63/69 (91.30%), Query Frame = 0
BLAST of CsGy3G019000 vs. TrEMBL
Match: tr|A0A0A0LBL8|A0A0A0LBL8_CUCSA (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_3G625640 PE=3 SV=1) HSP 1 Score: 119.4 bits (298), Expect = 4.8e-24 Identity = 56/70 (80.00%), Postives = 60/70 (85.71%), Query Frame = 0
BLAST of CsGy3G019000 vs. TrEMBL
Match: tr|A0A0A0KJD2|A0A0A0KJD2_CUCSA (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_6G409330 PE=4 SV=1) HSP 1 Score: 117.1 bits (292), Expect = 2.4e-23 Identity = 55/70 (78.57%), Postives = 59/70 (84.29%), Query Frame = 0
BLAST of CsGy3G019000 vs. TrEMBL
Match: tr|A0A1S3CMZ3|A0A1S3CMZ3_CUCME (pantoate--beta-alanine ligase OS=Cucumis melo OX=3656 GN=LOC103502785 PE=3 SV=1) HSP 1 Score: 110.5 bits (275), Expect = 2.2e-21 Identity = 52/69 (75.36%), Postives = 57/69 (82.61%), Query Frame = 0
BLAST of CsGy3G019000 vs. TrEMBL
Match: tr|A0A0A0K7A9|A0A0A0K7A9_CUCSA (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_7G061730 PE=4 SV=1) HSP 1 Score: 106.7 bits (265), Expect = 3.2e-20 Identity = 51/61 (83.61%), Postives = 55/61 (90.16%), Query Frame = 0
The following BLAST results are available for this feature:
The following terms have been associated with this gene:
GO Assignments
This gene is annotated with the following GO terms.
The following mRNA feature(s) are a part of this gene:
Analysis Name: InterPro Annotations of cucumber Gy14 genome (v2)
Date Performed: 2018-09-25
The following gene(s) are orthologous to this gene:
The following gene(s) are paralogous to this gene: None The following block(s) are covering this gene:
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