CSPI03G19100 (gene) Wild cucumber (PI 183967)
The following sequences are available for this feature:
Legend: five_prime_UTRCDSthree_prime_UTR Hold the cursor over a type above to highlight its positions in the sequence below.CACAACTAGGCTAAGAGGGCAATCAGCTCGATTTATGGAATTCTTTCTCCTTCTCCTTCTCCCTCCATTTCCTCACTTCCCTAATTTTATTTTTCATTTTTCTCTCATCTCTCCCTCTCCTATTCCATTTTCCCTCATTTTCACAAAACCTTTGATTTCCCTTTTTTTCCTTTCCCATTTTTCATTCAAACTACGAAAGCACTGGTAGTTCCAGTGATTTCACTGTGGAACATGACTCACTCAAGTCCCAAGACATGATCTTGCAGTGAAAATTAGATTTCGGTGAGGAGGTATATGGAGTTAAATCAACTATGGAGTTGATGTCGTTTTCCATCCTCACAATCTATACGACTATGGATTGCCCTGGAATGCCCAACTTTTCTTGCTTGGAGGAATCTGGTTCAGGGGATGAGACATCGACGAGGGTTGAACGTTTGGAGAAGGGCATGTGTGGGAGAAGTAGGCATATTTTCTTTAGAGGTGTTACTACGATTGTTACTAAGTTGTTCAATATTGTGGAACTCGATGTTGCAGTGTTTGAGAAGAAGGATTATCAACAATGGCTGGATTATCAGGTGGATGGCGAGTCTTTGTAAGAATGTGAATGATTTTGATTTTCATATTTGTTTTGAG ATGGAGTTGATGTCGTTTTCCATCCTCACAATCTATACGACTATGGATTGCCCTGGAATGCCCAACTTTTCTTGCTTGGAGGAATCTGGTTCAGGGGATGAGACATCGACGAGGGTTGAACGTTTGGAGAAGGGCATGTGTGGGAGAAGTAGGCATATTTTCTTTAGAGGTGTTACTACGATTGTTACTAAGTTGTTCAATATTGTGGAACTCGATGTTGCAGTGTTTGAGAAGAAGGATTATCAACAATGGCTGGATTATCAGGTGGATGGCGAGTCTTTGTAA ATGGAGTTGATGTCGTTTTCCATCCTCACAATCTATACGACTATGGATTGCCCTGGAATGCCCAACTTTTCTTGCTTGGAGGAATCTGGTTCAGGGGATGAGACATCGACGAGGGTTGAACGTTTGGAGAAGGGCATGTGTGGGAGAAGTAGGCATATTTTCTTTAGAGGTGTTACTACGATTGTTACTAAGTTGTTCAATATTGTGGAACTCGATGTTGCAGTGTTTGAGAAGAAGGATTATCAACAATGGCTGGATTATCAGGTGGATGGCGAGTCTTTGTAA
BLAST of CSPI03G19100 vs. Swiss-Prot
Match: PANC_ARATH (Pantoate--beta-alanine ligase OS=Arabidopsis thaliana GN=At5g48840 PE=1 SV=1) HSP 1 Score: 99.0 bits (245), Expect = 3.0e-20 Identity = 47/61 (77.05%), Postives = 51/61 (83.61%), Query Frame = 1
BLAST of CSPI03G19100 vs. Swiss-Prot
Match: PANC_ORYSJ (Pantoate--beta-alanine ligase OS=Oryza sativa subsp. japonica GN=PANC PE=2 SV=2) HSP 1 Score: 97.1 bits (240), Expect = 1.1e-19 Identity = 48/62 (77.42%), Postives = 52/62 (83.87%), Query Frame = 1
BLAST of CSPI03G19100 vs. Swiss-Prot
Match: PANC_LOTJA (Pantoate--beta-alanine ligase OS=Lotus japonicus GN=PANC PE=1 SV=3) HSP 1 Score: 91.7 bits (226), Expect = 4.8e-18 Identity = 46/70 (65.71%), Postives = 53/70 (75.71%), Query Frame = 1
BLAST of CSPI03G19100 vs. Swiss-Prot
Match: PANC_PSEMY (Pantothenate synthetase OS=Pseudomonas mendocina (strain ymp) GN=panC PE=3 SV=1) HSP 1 Score: 65.1 bits (157), Expect = 4.8e-10 Identity = 31/63 (49.21%), Postives = 43/63 (68.25%), Query Frame = 1
BLAST of CSPI03G19100 vs. Swiss-Prot
Match: PANC_PELCD (Pantothenate synthetase OS=Pelobacter carbinolicus (strain DSM 2380 / Gra Bd 1) GN=panC PE=3 SV=1) HSP 1 Score: 62.4 bits (150), Expect = 3.1e-09 Identity = 30/53 (56.60%), Postives = 39/53 (73.58%), Query Frame = 1
BLAST of CSPI03G19100 vs. TrEMBL
Match: A0A0A0L9F0_CUCSA (Uncharacterized protein OS=Cucumis sativus GN=Csa_3G223300 PE=4 SV=1) HSP 1 Score: 152.5 bits (384), Expect = 2.5e-34 Identity = 75/83 (90.36%), Postives = 77/83 (92.77%), Query Frame = 1
BLAST of CSPI03G19100 vs. TrEMBL
Match: A0A0A0K7A9_CUCSA (Uncharacterized protein OS=Cucumis sativus GN=Csa_7G061730 PE=4 SV=1) HSP 1 Score: 122.9 bits (307), Expect = 2.2e-25 Identity = 66/94 (70.21%), Postives = 72/94 (76.60%), Query Frame = 1
BLAST of CSPI03G19100 vs. TrEMBL
Match: A0A0A0LBL8_CUCSA (Uncharacterized protein OS=Cucumis sativus GN=Csa_3G625640 PE=3 SV=1) HSP 1 Score: 120.2 bits (300), Expect = 1.4e-24 Identity = 56/74 (75.68%), Postives = 62/74 (83.78%), Query Frame = 1
BLAST of CSPI03G19100 vs. TrEMBL
Match: A0A0A0KJD2_CUCSA (Uncharacterized protein OS=Cucumis sativus GN=Csa_6G409330 PE=4 SV=1) HSP 1 Score: 117.9 bits (294), Expect = 6.9e-24 Identity = 55/74 (74.32%), Postives = 61/74 (82.43%), Query Frame = 1
BLAST of CSPI03G19100 vs. TrEMBL
Match: A0A061DPD8_THECC (Pantoate-beta-alanine ligase, putative isoform 1 OS=Theobroma cacao GN=TCM_002982 PE=3 SV=1) HSP 1 Score: 103.2 bits (256), Expect = 1.8e-19 Identity = 48/61 (78.69%), Postives = 53/61 (86.89%), Query Frame = 1
BLAST of CSPI03G19100 vs. TAIR10
Match: AT5G48840.1 (AT5G48840.1 homolog of bacterial PANC) HSP 1 Score: 99.0 bits (245), Expect = 1.7e-21 Identity = 47/61 (77.05%), Postives = 51/61 (83.61%), Query Frame = 1
BLAST of CSPI03G19100 vs. NCBI nr
Match: gi|700202466|gb|KGN57599.1| (hypothetical protein Csa_3G223300 [Cucumis sativus]) HSP 1 Score: 152.5 bits (384), Expect = 3.6e-34 Identity = 75/83 (90.36%), Postives = 77/83 (92.77%), Query Frame = 1
BLAST of CSPI03G19100 vs. NCBI nr
Match: gi|700188473|gb|KGN43706.1| (hypothetical protein Csa_7G061730 [Cucumis sativus]) HSP 1 Score: 122.9 bits (307), Expect = 3.1e-25 Identity = 66/94 (70.21%), Postives = 72/94 (76.60%), Query Frame = 1
BLAST of CSPI03G19100 vs. NCBI nr
Match: gi|778682111|ref|XP_004152022.2| (PREDICTED: LOW QUALITY PROTEIN: pantoate--beta-alanine ligase [Cucumis sativus]) HSP 1 Score: 120.2 bits (300), Expect = 2.0e-24 Identity = 56/74 (75.68%), Postives = 62/74 (83.78%), Query Frame = 1
BLAST of CSPI03G19100 vs. NCBI nr
Match: gi|700203216|gb|KGN58349.1| (hypothetical protein Csa_3G625640 [Cucumis sativus]) HSP 1 Score: 120.2 bits (300), Expect = 2.0e-24 Identity = 56/74 (75.68%), Postives = 62/74 (83.78%), Query Frame = 1
BLAST of CSPI03G19100 vs. NCBI nr
Match: gi|778716155|ref|XP_004140085.2| (PREDICTED: LOW QUALITY PROTEIN: pantoate--beta-alanine ligase-like [Cucumis sativus]) HSP 1 Score: 117.9 bits (294), Expect = 9.9e-24 Identity = 55/74 (74.32%), Postives = 61/74 (82.43%), Query Frame = 1
The following BLAST results are available for this feature:
The following terms have been associated with this gene:
GO Assignments
This gene is annotated with the following GO terms.
The following mRNA feature(s) are a part of this gene:
Analysis Name: InterPro Annotations of cucumber (PI183967)
Date Performed: 2017-01-17
The following gene(s) are orthologous to this gene:
The following gene(s) are paralogous to this gene: None The following block(s) are covering this gene:
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