CsGy3G016640 (gene) Cucumber (Gy14) v2 | Cucurbit Genomics Database (CuGenDB)

Overview


Name	CsGy3G016640
Type	gene
Organism	Cucumis sativus (Cucumber (Gy14) v2)
Description	ATP-dependent Clp protease ATP-binding subunit clpX
Location	Chr3 : 12367698 .. 12369543 (+)

Genome Viewer

Gene Expression

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: five_prime_UTRexonCDSthree_prime_UTR

Hold the cursor over a type above to highlight its positions in the sequence below.

TAATGGAAGACATTAGTTTTTAGGAGTTGCTAGTACTTTTCATTTTTGTACTCAGCCTTGGCATTCTTTTAGGATGTTTCTTGATTTAGAATGATGTTTTTCTAGTTCGAATTCTCTTCTTCCTTCTGCTGGTCGTAAACAAACTTGAGCCAAGAAAAGAATATCCAAATTGTAAGAATAGTATTTTATTTCTCAAAGTAGTTGATGTGAGCTTAAGTGCGTGCGTTTGTAAGATTTTCATGGTTTTCATTTATCAAAGGTCAGTAATGGTATTAAAAAAGTTAATATTCCTCTCTTTACAAGAAAGATTTTGTTTAAGGAATTCTATCTGAGATGATGGAAGTCGTTGAAGATGGCAGAAGCCATGAAAATCTTAAGGAAAAGAAAAGAAAAAGAACCAAGGCTGACAAATTTTAGCGTAGAGTACTAATGACAAAAAAATATGAACCACAAGCTTTTTATTCTCCTCCTTCTTATGTTTGGTTGGGATTGAAAAGTAGAATAGGATTGTGGTGTGGAATACCAAGCTTTAAAGAACAGATAACAACATGATAAAAGGATAAAGGATAAGGGTCATTAAGAATCACACAAACTGAAGACAGCCTCACAAAAAACATTATGCTTTGATTTCAGGGATAATTTGGATATTCCTGCTTTATCATTTCTCTCTCTCTCTTTCTCTTAACACAAGACCTACCATAAGAGAGTTCCCCAAATGGGGTGTAAACTGAACTCTCCCAATACCCCAATTCTCTTCAAATTTTCCACAAAAAGATCCAACCTTGGAGGCAAAAGCATCAAATTTTCTCCCACTTCCTGTCTCAACAGTCAAAACCAAGAAACACCCACCATTCCCACCACCACAAAGATCCCAAAATCTAATATTTCCACTGTTCATTTCAAGTCTCTCACAGCTTGCAAGCTTGGCATTTCTAGATTCCCTGATTTCCAATATAATGCTGAAGGAGGAACAGGAACTGGGTCTGTCAAGATCCACGATGATAATGGCAGCAACAGCCGACTTTTAGTTTCTTTCGATGTTGACACCCTTTACATCCCACCATTGACAACTCAAACCACTAAGTTTCTGGGTCTGCCATTGCCACCGTTTCTGAAGATTGATGTTCTTCCTGAATTCTTCCAAGGAAGCATCAATCAAGAGTCTGGCAAGGTAATCACGCCCATAAGTTGTTTGATAAAAGTTCTAGTTCAACAAAATCTTAGAAAACACTAGTTGATTCAATTGTAAATATTAATAACAGTGATCTGATTTGCTATATCTGCAAGCAGGTTGAGCTTGAATTTGAGTCAAAGTTCATATTCTCAATTGGGAGTTTGTATAGAGCTCCTCCATTGCTAGTAAAAACCGTGCTGAGTTCTGAAGAATCAAGAGGAATCATAAGAAGTGGAAAAGGAGAGAGATTGGATGACGATGGAAATTGCAGATTGGTAGGGGTGGCTACTGTTGACCCCATTGATGATTTGTTTCTCAATTCCTTCCTCTCTCTCCCCACTGAATGTATTGCAAACCTCAATGCTATAATCACATTCTCTTAGAGAGACAGCAAGAAGAATATATTATAACACAGTGATGTAATTGTTTGGGACAAAAATCAGACACATACATATTTGAAAACAAATAATATAATGCATAGGTAGTTGTTCTGGTCATCCATGATTTGTGTTTGAATTTTGTCATTCCATTTTTTTATAAACCTTTCGTCTGGTTAAGAGCAAAAGAGACCATATCTTTTTGTAGTTTTTCTATGACTAATTTTTCTTTGATTGGTTGGTTTCTCATTCATTATTTAATAGACTTTACTAATTGTATTTGTGTTCACAAGAC

mRNA sequence

TAATGGAAGACATTAGTTTTTAGGAGTTGCTAGTACTTTTCATTTTTGTACTCAGCCTTGGCATTCTTTTAGGATGTTTCTTGATTTAGAATGATGTTTTTCTAGTTCGAATTCTCTTCTTCCTTCTGCTGGTCGTAAACAAACTTGAGCCAAGAAAAGAATATCCAAATTGTAAGAATAGTATTTTATTTCTCAAAGTAGTTGATGTGAGCTTAAGTGCGTGCGTTTGTAAGATTTTCATGGTTTTCATTTATCAAAGGTCAGTAATGGTATTAAAAAAGTTAATATTCCTCTCTTTACAAGAAAGATTTTGTTTAAGGAATTCTATCTGAGATGATGGAAGTCGTTGAAGATGGCAGAAGCCATGAAAATCTTAAGGAAAAGAAAAGAAAAAGAACCAAGGCTGACAAATTTTAGCGTAGAGTACTAATGACAAAAAAATATGAACCACAAGCTTTTTATTCTCCTCCTTCTTATGTTTGGTTGGGATTGAAAAGTAGAATAGGATTGTGGTGTGGAATACCAAGCTTTAAAGAACAGATAACAACATGATAAAAGGATAAAGGATAAGGGTCATTAAGAATCACACAAACTGAAGACAGCCTCACAAAAAACATTATGCTTTGATTTCAGGGATAATTTGGATATTCCTGCTTTATCATTTCTCTCTCTCTCTTTCTCTTAACACAAGACCTACCATAAGAGAGTTCCCCAAATGGGGTGTAAACTGAACTCTCCCAATACCCCAATTCTCTTCAAATTTTCCACAAAAAGATCCAACCTTGGAGGCAAAAGCATCAAATTTTCTCCCACTTCCTGTCTCAACAGTCAAAACCAAGAAACACCCACCATTCCCACCACCACAAAGATCCCAAAATCTAATATTTCCACTGTTCATTTCAAGTCTCTCACAGCTTGCAAGCTTGGCATTTCTAGATTCCCTGATTTCCAATATAATGCTGAAGGAGGAACAGGAACTGGGTCTGTCAAGATCCACGATGATAATGGCAGCAACAGCCGACTTTTAGTTTCTTTCGATGTTGACACCCTTTACATCCCACCATTGACAACTCAAACCACTAAGTTTCTGGGTCTGCCATTGCCACCGTTTCTGAAGATTGATGTTCTTCCTGAATTCTTCCAAGGAAGCATCAATCAAGAGTCTGGCAAGGTTGAGCTTGAATTTGAGTCAAAGTTCATATTCTCAATTGGGAGTTTGTATAGAGCTCCTCCATTGCTAGTAAAAACCGTGCTGAGTTCTGAAGAATCAAGAGGAATCATAAGAAGTGGAAAAGGAGAGAGATTGGATGACGATGGAAATTGCAGATTGGTAGGGGTGGCTACTGTTGACCCCATTGATGATTTGTTTCTCAATTCCTTCCTCTCTCTCCCCACTGAATGTATTGCAAACCTCAATGCTATAATCACATTCTCTTAGAGAGACAGCAAGAAGAATATATTATAACACAGTGATGTAATTGTTTGGGACAAAAATCAGACACATACATATTTGAAAACAAATAATATAATGCATAGGTAGTTGTTCTGGTCATCCATGATTTGTGTTTGAATTTTGTCATTCCATTTTTTTATAAACCTTTCGTCTGGTTAAGAGCAAAAGAGACCATATCTTTTTGTAGTTTTTCTATGACTAATTTTTCTTTGATTGGTTGGTTTCTCATTCATTATTTAATAGACTTTACTAATTGTATTTGTGTTCACAAGAC

Coding sequence (CDS)

ATGGGGTGTAAACTGAACTCTCCCAATACCCCAATTCTCTTCAAATTTTCCACAAAAAGATCCAACCTTGGAGGCAAAAGCATCAAATTTTCTCCCACTTCCTGTCTCAACAGTCAAAACCAAGAAACACCCACCATTCCCACCACCACAAAGATCCCAAAATCTAATATTTCCACTGTTCATTTCAAGTCTCTCACAGCTTGCAAGCTTGGCATTTCTAGATTCCCTGATTTCCAATATAATGCTGAAGGAGGAACAGGAACTGGGTCTGTCAAGATCCACGATGATAATGGCAGCAACAGCCGACTTTTAGTTTCTTTCGATGTTGACACCCTTTACATCCCACCATTGACAACTCAAACCACTAAGTTTCTGGGTCTGCCATTGCCACCGTTTCTGAAGATTGATGTTCTTCCTGAATTCTTCCAAGGAAGCATCAATCAAGAGTCTGGCAAGGTTGAGCTTGAATTTGAGTCAAAGTTCATATTCTCAATTGGGAGTTTGTATAGAGCTCCTCCATTGCTAGTAAAAACCGTGCTGAGTTCTGAAGAATCAAGAGGAATCATAAGAAGTGGAAAAGGAGAGAGATTGGATGACGATGGAAATTGCAGATTGGTAGGGGTGGCTACTGTTGACCCCATTGATGATTTGTTTCTCAATTCCTTCCTCTCTCTCCCCACTGAATGTATTGCAAACCTCAATGCTATAATCACATTCTCTTAG

Protein sequence

MGCKLNSPNTPILFKFSTKRSNLGGKSIKFSPTSCLNSQNQETPTIPTTTKIPKSNISTVHFKSLTACKLGISRFPDFQYNAEGGTGTGSVKIHDDNGSNSRLLVSFDVDTLYIPPLTTQTTKFLGLPLPPFLKIDVLPEFFQGSINQESGKVELEFESKFIFSIGSLYRAPPLLVKTVLSSEESRGIIRSGKGERLDDDGNCRLVGVATVDPIDDLFLNSFLSLPTECIANLNAIITFS

Homology

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BLAST of CsGy3G016640 vs. NCBI nr
Match: XP_004140796.1 (PREDICTED: uncharacterized protein LOC101221214 [Cucumis sativus] >KGN57335.1 hypothetical protein Csa_3G180240 [Cucumis sativus])

HSP 1 Score: 477.6 bits (1228), Expect = 2.4e-131
Identity = 240/240 (100.00%), Postives = 240/240 (100.00%), Query Frame = 0


Query: 1   MGCKLNSPNTPILFKFSTKRSNLGGKSIKFSPTSCLNSQNQETPTIPTTTKIPKSNISTV 60
           MGCKLNSPNTPILFKFSTKRSNLGGKSIKFSPTSCLNSQNQETPTIPTTTKIPKSNISTV
Sbjct: 1   MGCKLNSPNTPILFKFSTKRSNLGGKSIKFSPTSCLNSQNQETPTIPTTTKIPKSNISTV 60

Query: 61  HFKSLTACKLGISRFPDFQYNAEGGTGTGSVKIHDDNGSNSRLLVSFDVDTLYIPPLTTQ 120
           HFKSLTACKLGISRFPDFQYNAEGGTGTGSVKIHDDNGSNSRLLVSFDVDTLYIPPLTTQ
Sbjct: 61  HFKSLTACKLGISRFPDFQYNAEGGTGTGSVKIHDDNGSNSRLLVSFDVDTLYIPPLTTQ 120

Query: 121 TTKFLGLPLPPFLKIDVLPEFFQGSINQESGKVELEFESKFIFSIGSLYRAPPLLVKTVL 180
           TTKFLGLPLPPFLKIDVLPEFFQGSINQESGKVELEFESKFIFSIGSLYRAPPLLVKTVL
Sbjct: 121 TTKFLGLPLPPFLKIDVLPEFFQGSINQESGKVELEFESKFIFSIGSLYRAPPLLVKTVL 180

Query: 181 SSEESRGIIRSGKGERLDDDGNCRLVGVATVDPIDDLFLNSFLSLPTECIANLNAIITFS 240
           SSEESRGIIRSGKGERLDDDGNCRLVGVATVDPIDDLFLNSFLSLPTECIANLNAIITFS
Sbjct: 181 SSEESRGIIRSGKGERLDDDGNCRLVGVATVDPIDDLFLNSFLSLPTECIANLNAIITFS 240

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BLAST of CsGy3G016640 vs. NCBI nr
Match: XP_008439159.1 (PREDICTED: uncharacterized protein LOC103484039 [Cucumis melo])

HSP 1 Score: 443.7 bits (1140), Expect = 3.9e-121
Identity = 224/240 (93.33%), Postives = 230/240 (95.83%), Query Frame = 0


Query: 1   MGCKLNSPNTPILFKFSTKRSNLGGKSIKFSPTSCLNSQNQETPTIPTTTKIPKSNISTV 60
           MGCKLNSPNTPILFKF+TKRS LGGKSI FSPTSCLN+QNQETP     TKIPKSNISTV
Sbjct: 1   MGCKLNSPNTPILFKFATKRSKLGGKSINFSPTSCLNNQNQETP-----TKIPKSNISTV 60

Query: 61  HFKSLTACKLGISRFPDFQYNAEGGTGTGSVKIHDDNGSNSRLLVSFDVDTLYIPPLTTQ 120
           HFKSLTACKLGISRFPDF+YNAEGGTGTGSVKIHDDN S+SRLLVSFDVDTLYIPPLTTQ
Sbjct: 61  HFKSLTACKLGISRFPDFRYNAEGGTGTGSVKIHDDNSSSSRLLVSFDVDTLYIPPLTTQ 120

Query: 121 TTKFLGLPLPPFLKIDVLPEFFQGSINQESGKVELEFESKFIFSIGSLYRAPPLLVKTVL 180
           TTKFLGLPLPPFLKID+LPEFFQGSINQESGKVELEFESKFIFSIGSLY+APPLLVKTVL
Sbjct: 121 TTKFLGLPLPPFLKIDILPEFFQGSINQESGKVELEFESKFIFSIGSLYKAPPLLVKTVL 180

Query: 181 SSEESRGIIRSGKGERLDDDGNCRLVGVATVDPIDDLFLNSFLSLPTECIANLNAIITFS 240
           SSEESRGIIRSGKGERLDD G CRLVGVATVDPIDDLFLNSFLSLPTECIANLNAIITFS
Sbjct: 181 SSEESRGIIRSGKGERLDDKGKCRLVGVATVDPIDDLFLNSFLSLPTECIANLNAIITFS 235

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BLAST of CsGy3G016640 vs. NCBI nr
Match: XP_022140932.1 (uncharacterized protein LOC111011473 [Momordica charantia])

HSP 1 Score: 360.1 bits (923), Expect = 5.6e-96
Identity = 181/244 (74.18%), Postives = 209/244 (85.66%), Query Frame = 0


Query: 1   MGCKLNSPNTPILFKFSTKRSNLGGKSIKFSPTSCLNSQNQETPTIPTT----TKIPKSN 60
           MGCK+N+PNT ILFKF TKR+ LGGKS  F PT  ++SQNQ+ PTI TT    T+IPKS 
Sbjct: 1   MGCKINTPNTQILFKFPTKRAELGGKSTTFCPTFSIHSQNQDAPTISTTTTNQTQIPKSE 60

Query: 61  ISTVHFKSLTACKLGISRFPDFQYNAEGGTGTGSVKIHDDNGSNSRLLVSFDVDTLYIPP 120
           IST+HFK+L ACKLGISR+PDF+YNAEGGTGT S    + +GS  ++ VSFDV TLYIPP
Sbjct: 61  ISTLHFKTLRACKLGISRYPDFEYNAEGGTGTASA---ETDGSGDQVSVSFDVGTLYIPP 120

Query: 121 LTTQTTKFLGLPLPPFLKIDVLPEFFQGSINQESGKVELEFESKFIFSIGSLYRAPPLLV 180
           LTT+TTKFLGLPLPPFLKID+LPEFF G+I++ESGKVELEF++KFIFS+GS+Y+APPLLV
Sbjct: 121 LTTETTKFLGLPLPPFLKIDILPEFFHGNISKESGKVELEFKAKFIFSVGSIYKAPPLLV 180

Query: 181 KTVLSSEESRGIIRSGKGERLDDDGNCRLVGVATVDPIDDLFLNSFLSLPTECIANLNAI 240
           KTVL+SEES G IR GKGERLD +G CRLVGVATVDPIDD  LNSFLSLPTECIA LNAI
Sbjct: 181 KTVLTSEESEGSIRRGKGERLDKEGKCRLVGVATVDPIDDFLLNSFLSLPTECIAILNAI 240

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BLAST of CsGy3G016640 vs. NCBI nr
Match: XP_022968031.1 (uncharacterized protein LOC111467398 [Cucurbita maxima])

HSP 1 Score: 348.2 bits (892), Expect = 2.2e-92
Identity = 176/244 (72.13%), Postives = 197/244 (80.74%), Query Frame = 0


Query: 1   MGCKLNSPNTPILFKFSTKRSNLGGKSIKFSPTSCLNSQNQETPTIPTT----TKIPKSN 60
           MGCKLN+PN P+LFKF TK   LGGK+    P  CL+SQNQETPTI T     T+IPKSN
Sbjct: 1   MGCKLNTPNAPVLFKFPTKSPKLGGKTFTLCPNFCLSSQNQETPTISTAKTPQTQIPKSN 60

Query: 61  ISTVHFKSLTACKLGISRFPDFQYNAEGGTGTGSVKIHDDNGSNSRLLVSFDVDTLYIPP 120
            STVHFKSLTACKLGISR+PDF+YNAEGGT                    FDV TLYIPP
Sbjct: 61  FSTVHFKSLTACKLGISRYPDFEYNAEGGT-XXXXXXXXXXXXXXXXXXXFDVGTLYIPP 120

Query: 121 LTTQTTKFLGLPLPPFLKIDVLPEFFQGSINQESGKVELEFESKFIFSIGSLYRAPPLLV 180
           LTTQTTKFLGLPLPPFLKID++PE F G+INQESGK+ELEF++KF+FS+G++Y+APPLLV
Sbjct: 121 LTTQTTKFLGLPLPPFLKIDIVPELFHGNINQESGKIELEFKAKFLFSVGNVYKAPPLLV 180

Query: 181 KTVLSSEESRGIIRSGKGERLDDDGNCRLVGVATVDPIDDLFLNSFLSLPTECIANLNAI 240
           KTVL+SEES+G IRSGKGERLD+ G CRLVGVA VDPIDDL LNSFLSLPTECIA LNAI
Sbjct: 181 KTVLTSEESKGSIRSGKGERLDEKGKCRLVGVAIVDPIDDLLLNSFLSLPTECIAKLNAI 240

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BLAST of CsGy3G016640 vs. NCBI nr
Match: XP_022945057.1 (uncharacterized protein LOC111449415 [Cucurbita moschata])

HSP 1 Score: 343.6 bits (880), Expect = 5.5e-91
Identity = 174/244 (71.31%), Postives = 197/244 (80.74%), Query Frame = 0


Query: 1   MGCKLNSPNTPILFKFSTKRSNLGGKSIKFSPTSCLNSQNQETPTIPTT----TKIPKSN 60
           MGCKLN+PN P LFKF TK   LGGK+  F P  CL+SQ+QETPTI T     T+IPKSN
Sbjct: 1   MGCKLNTPNAPFLFKFPTKSPKLGGKTFTFCPNFCLSSQSQETPTISTAKTPQTQIPKSN 60

Query: 61  ISTVHFKSLTACKLGISRFPDFQYNAEGGTGTGSVKIHDDNGSNSRLLVSFDVDTLYIPP 120
            STV+FKSLTACKLGISR+PDF+YNAEGGT                    FD+ TLYIPP
Sbjct: 61  FSTVNFKSLTACKLGISRYPDFEYNAEGGT-XXXXXXXXXXXXXXXXXXXFDLGTLYIPP 120

Query: 121 LTTQTTKFLGLPLPPFLKIDVLPEFFQGSINQESGKVELEFESKFIFSIGSLYRAPPLLV 180
           LTTQTTKFLGLPLPPFLKID++PE F G+INQESGK+ELEF++KF+FS+G++Y+APPLLV
Sbjct: 121 LTTQTTKFLGLPLPPFLKIDIVPELFHGNINQESGKIELEFKAKFLFSVGNVYKAPPLLV 180

Query: 181 KTVLSSEESRGIIRSGKGERLDDDGNCRLVGVATVDPIDDLFLNSFLSLPTECIANLNAI 240
           KTVL+SEES+G IRSGKGERLD+ G CRLVGVA VDPIDDL LNSFLSLPTECIA LNAI
Sbjct: 181 KTVLTSEESKGSIRSGKGERLDEKGKCRLVGVAIVDPIDDLLLNSFLSLPTECIAKLNAI 240

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BLAST of CsGy3G016640 vs. TAIR10
Match: AT5G62140.1 (unknown protein)

HSP 1 Score: 236.9 bits (603), Expect = 1.3e-62
Identity = 134/240 (55.83%), Postives = 173/240 (72.08%), Query Frame = 0


Query: 4   KLNSPNTPILFKFSTKRSNLGGKSIKFSPTSCLNSQNQETPTIPTTTKIPKSNISTVHFK 63
           K+NS  T I + + + R  +  KS +       NS N +    P TT++P + + +V FK
Sbjct: 5   KINSLTTTI-YNYKSPRRYINHKS-QNQIKLISNSLNPK----PNTTQLP-NTLYSVSFK 64

Query: 64  SLTACKLGISRFPDFQYNAEGGTGTGSVKIHDD--NGSNSRLLVSFDVDTLYIPPLTTQT 123
           ++   KLGISR+PDF+Y+  GG+G G+ K  DD    SNS L V F+V TLYIP LT+QT
Sbjct: 65  TIGTGKLGISRYPDFEYSPLGGSGAGTAKKIDDKNRASNSELSVCFNVATLYIPSLTSQT 124

Query: 124 TKFLGLPLPPFLKIDVLPEFFQGSINQESGKVELEFESKFIFSI-GSLYRAPPLLVKTVL 183
           TKFLG PLPPFLKID+ PE FQG+INQESGKVELEF +KF F+  G +YRAP L+V+TVL
Sbjct: 125 TKFLGFPLPPFLKIDISPEIFQGTINQESGKVELEFMAKFFFTAGGGIYRAPALVVRTVL 184

Query: 184 SSEESRGIIRSGKGERLDDDGNCRLVGVATVDPIDDLFLNSFLSLPTECIANLNAIITFS 241
           ++EES G  + GKGERLD++G CRLVGVA V+ IDDLF+N+FLSLP EC+A+L AII+ S
Sbjct: 185 TTEESIGENKRGKGERLDEEGKCRLVGVAKVETIDDLFMNTFLSLPAECLADLQAIISVS 237

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BLAST of CsGy3G016640 vs. TrEMBL
Match: tr|A0A0A0L5S5|A0A0A0L5S5_CUCSA (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_3G180240 PE=4 SV=1)

HSP 1 Score: 477.6 bits (1228), Expect = 1.6e-131
Identity = 240/240 (100.00%), Postives = 240/240 (100.00%), Query Frame = 0


Query: 1   MGCKLNSPNTPILFKFSTKRSNLGGKSIKFSPTSCLNSQNQETPTIPTTTKIPKSNISTV 60
           MGCKLNSPNTPILFKFSTKRSNLGGKSIKFSPTSCLNSQNQETPTIPTTTKIPKSNISTV
Sbjct: 1   MGCKLNSPNTPILFKFSTKRSNLGGKSIKFSPTSCLNSQNQETPTIPTTTKIPKSNISTV 60

Query: 61  HFKSLTACKLGISRFPDFQYNAEGGTGTGSVKIHDDNGSNSRLLVSFDVDTLYIPPLTTQ 120
           HFKSLTACKLGISRFPDFQYNAEGGTGTGSVKIHDDNGSNSRLLVSFDVDTLYIPPLTTQ
Sbjct: 61  HFKSLTACKLGISRFPDFQYNAEGGTGTGSVKIHDDNGSNSRLLVSFDVDTLYIPPLTTQ 120

Query: 121 TTKFLGLPLPPFLKIDVLPEFFQGSINQESGKVELEFESKFIFSIGSLYRAPPLLVKTVL 180
           TTKFLGLPLPPFLKIDVLPEFFQGSINQESGKVELEFESKFIFSIGSLYRAPPLLVKTVL
Sbjct: 121 TTKFLGLPLPPFLKIDVLPEFFQGSINQESGKVELEFESKFIFSIGSLYRAPPLLVKTVL 180

Query: 181 SSEESRGIIRSGKGERLDDDGNCRLVGVATVDPIDDLFLNSFLSLPTECIANLNAIITFS 240
           SSEESRGIIRSGKGERLDDDGNCRLVGVATVDPIDDLFLNSFLSLPTECIANLNAIITFS
Sbjct: 181 SSEESRGIIRSGKGERLDDDGNCRLVGVATVDPIDDLFLNSFLSLPTECIANLNAIITFS 240

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BLAST of CsGy3G016640 vs. TrEMBL
Match: tr|A0A1S3AYS2|A0A1S3AYS2_CUCME (uncharacterized protein LOC103484039 OS=Cucumis melo OX=3656 GN=LOC103484039 PE=4 SV=1)

HSP 1 Score: 443.7 bits (1140), Expect = 2.6e-121
Identity = 224/240 (93.33%), Postives = 230/240 (95.83%), Query Frame = 0


Query: 1   MGCKLNSPNTPILFKFSTKRSNLGGKSIKFSPTSCLNSQNQETPTIPTTTKIPKSNISTV 60
           MGCKLNSPNTPILFKF+TKRS LGGKSI FSPTSCLN+QNQETP     TKIPKSNISTV
Sbjct: 1   MGCKLNSPNTPILFKFATKRSKLGGKSINFSPTSCLNNQNQETP-----TKIPKSNISTV 60

Query: 61  HFKSLTACKLGISRFPDFQYNAEGGTGTGSVKIHDDNGSNSRLLVSFDVDTLYIPPLTTQ 120
           HFKSLTACKLGISRFPDF+YNAEGGTGTGSVKIHDDN S+SRLLVSFDVDTLYIPPLTTQ
Sbjct: 61  HFKSLTACKLGISRFPDFRYNAEGGTGTGSVKIHDDNSSSSRLLVSFDVDTLYIPPLTTQ 120

Query: 121 TTKFLGLPLPPFLKIDVLPEFFQGSINQESGKVELEFESKFIFSIGSLYRAPPLLVKTVL 180
           TTKFLGLPLPPFLKID+LPEFFQGSINQESGKVELEFESKFIFSIGSLY+APPLLVKTVL
Sbjct: 121 TTKFLGLPLPPFLKIDILPEFFQGSINQESGKVELEFESKFIFSIGSLYKAPPLLVKTVL 180

Query: 181 SSEESRGIIRSGKGERLDDDGNCRLVGVATVDPIDDLFLNSFLSLPTECIANLNAIITFS 240
           SSEESRGIIRSGKGERLDD G CRLVGVATVDPIDDLFLNSFLSLPTECIANLNAIITFS
Sbjct: 181 SSEESRGIIRSGKGERLDDKGKCRLVGVATVDPIDDLFLNSFLSLPTECIANLNAIITFS 235

[Close]

BLAST of CsGy3G016640 vs. TrEMBL
Match: tr|A0A2N9FUW5|A0A2N9FUW5_FAGSY (Uncharacterized protein OS=Fagus sylvatica OX=28930 GN=FSB_LOCUS18845 PE=4 SV=1)

HSP 1 Score: 305.1 bits (780), Expect = 1.4e-79
Identity = 154/240 (64.17%), Postives = 188/240 (78.33%), Query Frame = 0


Query: 1   MGCKLNSPNTPILFKFSTKRSNLGGKSIKFSPTSCLNSQNQETPTIPTTTKIPKSNISTV 60
           M CK+NS N P+L KF TK   LG K+I FS  S    Q   + T  T  ++P+SN   +
Sbjct: 1   MWCKINSSN-PVLCKFPTKNPKLGPKTITFSSFSNNKKQEFISSTAVTQVQVPESNAYNL 60

Query: 61  HFKSLTACKLGISRFPDFQYNAEGGTGTGSVKIHDDNGSNSRLLVSFDVDTLYIPPLTTQ 120
            FK+L  CKLGISR+PDF+Y+AEGG GTGS     D+  N  + VSFD+ +LYIPPLT+ 
Sbjct: 61  KFKTLGGCKLGISRYPDFEYDAEGGIGTGSGTKVPDSELNDEISVSFDIKSLYIPPLTSA 120

Query: 121 TTKFLGLPLPPFLKIDVLPEFFQGSINQESGKVELEFESKFIFSIGSLYRAPPLLVKTVL 180
           TTKFLGLPLPPFLKID++PEFFQGSI++ESGKV+LEF +KF FS+GS+YRAPPLLVKTVL
Sbjct: 121 TTKFLGLPLPPFLKIDIVPEFFQGSIDRESGKVDLEFMAKFWFSVGSIYRAPPLLVKTVL 180

Query: 181 SSEESRGIIRSGKGERLDDDGNCRLVGVATVDPIDDLFLNSFLSLPTECIANLNAIITFS 240
           +SEES G IRSG+G+RLD +GNC LVGVATVDPIDD  +N+FL LPTEC+ANLNA+I+FS
Sbjct: 181 TSEESNGTIRSGRGKRLDKEGNCSLVGVATVDPIDDFLMNTFLGLPTECLANLNAVISFS 239

[Close]

BLAST of CsGy3G016640 vs. TrEMBL
Match: tr|A9PEN1|A9PEN1_POPTR (Uncharacterized protein OS=Populus trichocarpa OX=3694 GN=POPTR_012G134500v3 PE=2 SV=1)

HSP 1 Score: 300.4 bits (768), Expect = 3.5e-78
Identity = 150/240 (62.50%), Postives = 195/240 (81.25%), Query Frame = 0


Query: 1   MGCKLNSPNTPILFKFSTKRSNLGGKSIKFSPTSCLNSQNQETPTIPTTTKIPKSNISTV 60
           MGCK+N+P+ P+LFKFST++ +   K+I FS  S       +  +IP+TT +PK ++ TV
Sbjct: 1   MGCKINTPSPPVLFKFSTRKPSHRIKAIAFSSYS-----PNQPESIPSTT-LPKPDVYTV 60

Query: 61  HFKSLTACKLGISRFPDFQYNAEGGTGTGSVKIHDDNGSNSRLLVSFDVDTLYIPPLTTQ 120
           +FK+L  CKLGISR+PDF+YNA+GGTGTG+     D+   + + VSFD+ TLYIPPLT+ 
Sbjct: 61  NFKTLGGCKLGISRYPDFEYNAQGGTGTGTCTKAKDSSDLNTVSVSFDMKTLYIPPLTSG 120

Query: 121 TTKFLGLPLPPFLKIDVLPEFFQGSINQESGKVELEFESKFIFSIGSLYRAPPLLVKTVL 180
           TTKFLGLPLPPFLKID++PE FQG+I+Q+SGKV+LEF +KF FS+G++YRAPPLLVKT L
Sbjct: 121 TTKFLGLPLPPFLKIDMVPELFQGTIDQDSGKVDLEFMAKFWFSVGTIYRAPPLLVKTRL 180

Query: 181 SSEESRGIIRSGKGERLDDDGNCRLVGVATVDPIDDLFLNSFLSLPTECIANLNAIITFS 240
           +SEES G IRSG+GERLD +G CRLVGVATVDPI+D+F+N+FL LPTEC+A L+A I+FS
Sbjct: 181 TSEESTGTIRSGQGERLDKEGKCRLVGVATVDPINDVFMNTFLGLPTECLAKLSAAISFS 234

[Close]

BLAST of CsGy3G016640 vs. TrEMBL
Match: tr|M5XL39|M5XL39_PRUPE (Uncharacterized protein OS=Prunus persica OX=3760 GN=PRUPE_2G289100 PE=4 SV=1)

HSP 1 Score: 298.5 bits (763), Expect = 1.3e-77
Identity = 157/245 (64.08%), Postives = 197/245 (80.41%), Query Frame = 0


Query: 1   MGCKLNSPN-TPILFKFSTKRSNLGGKSIKFSPTSCLNSQNQE---TPTIPTTTKIPKSN 60
           MGC++N+ N  P+L+KFST+R     K+I FS  S  NSQNQ+     T  T T+ PKS 
Sbjct: 1   MGCRINNSNPPPVLWKFSTQRQRPITKTISFSSPS--NSQNQQELAPITAATQTQHPKSK 60

Query: 61  ISTVHFKSLTACKLGISRFPDFQYNAEGGTGTGS-VKIHDDNGSNSRLLVSFDVDTLYIP 120
           + TV F++L+ACKLGIS +PDF+YNAEGG GTGS  K+ + N S+  + VSFD++TLYIP
Sbjct: 61  LYTVKFRTLSACKLGISIYPDFEYNAEGGKGTGSGAKVAESNLSD-EVSVSFDLETLYIP 120

Query: 121 PLTTQTTKFLGLPLPPFLKIDVLPEFFQGSINQESGKVELEFESKFIFSIGSLYRAPPLL 180
           PL + TT+FLGLPLPPFLKID++PE F GSINQESG+V+LEFE+KF FS+GS+Y+A PLL
Sbjct: 121 PLKSATTRFLGLPLPPFLKIDIVPELFSGSINQESGQVDLEFEAKFWFSVGSIYKAAPLL 180

Query: 181 VKTVLSSEESRGIIRSGKGERLDDDGNCRLVGVATVDPIDDLFLNSFLSLPTECIANLNA 240
           VKTVL+SEES+G I+SGKG+RLD+ G CRLVGVATVDPIDD  +NSFL LPTEC+A+LNA
Sbjct: 181 VKTVLTSEESKGSIKSGKGKRLDEQGKCRLVGVATVDPIDDFLINSFLGLPTECLADLNA 240

The following BLAST results are available for this feature:

BLAST of CsGy3G016640 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_004140796.1	2.4e-131	100.00	PREDICTED: uncharacterized protein LOC101221214 [Cucumis sativus] >KGN57335.1 hy...	[more]
XP_008439159.1	3.9e-121	93.33	PREDICTED: uncharacterized protein LOC103484039 [Cucumis melo]	[more]
XP_022140932.1	5.6e-96	74.18	uncharacterized protein LOC111011473 [Momordica charantia]	[more]
XP_022968031.1	2.2e-92	72.13	uncharacterized protein LOC111467398 [Cucurbita maxima]	[more]
XP_022945057.1	5.5e-91	71.31	uncharacterized protein LOC111449415 [Cucurbita moschata]	[more]

BLAST of CsGy3G016640 vs. TAIR10


Match Name	E-value	Identity	Description
AT5G62140.1	1.3e-62	55.83	unknown protein	[more]

BLAST of CsGy3G016640 vs. Swiss-Prot


Match Name	E-value	Identity	Description

BLAST of CsGy3G016640 vs. TrEMBL


Match Name	E-value	Identity	Description
tr\|A0A0A0L5S5\|A0A0A0L5S5_CUCSA	1.6e-131	100.00	Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_3G180240 PE=4 SV=1	[more]
tr\|A0A1S3AYS2\|A0A1S3AYS2_CUCME	2.6e-121	93.33	uncharacterized protein LOC103484039 OS=Cucumis melo OX=3656 GN=LOC103484039 PE=...	[more]
tr\|A0A2N9FUW5\|A0A2N9FUW5_FAGSY	1.4e-79	64.17	Uncharacterized protein OS=Fagus sylvatica OX=28930 GN=FSB_LOCUS18845 PE=4 SV=1	[more]
tr\|A9PEN1\|A9PEN1_POPTR	3.5e-78	62.50	Uncharacterized protein OS=Populus trichocarpa OX=3694 GN=POPTR_012G134500v3 PE=...	[more]
tr\|M5XL39\|M5XL39_PRUPE	1.3e-77	64.08	Uncharacterized protein OS=Prunus persica OX=3760 GN=PRUPE_2G289100 PE=4 SV=1	[more]

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0008150	biological_process
cellular_component	GO:0005575	cellular_component
molecular_function	GO:0003674	molecular_function

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
CsGy3G016640.1	CsGy3G016640.1	mRNA

InterPro

Analysis Name: InterPro Annotations of cucumber Gy14 genome (v2)
Date Performed: 2018-09-25


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
None	No IPR available	PANTHER	PTHR35320	FAMILY NOT NAMED	coord: 1..240

Synteny

The following gene(s) are orthologous to this gene:


Gene	Orthologue	Organism	Block
CsGy3G016640	Csa3G180240	Cucumber (Chinese Long) v2	cgybcuB109
CsGy3G016640	MELO3C006867	Melon (DHL92) v3.5.1	cgybmeB200
CsGy3G016640	CSPI03G16530	Wild cucumber (PI 183967)	cgybcpiB110
CsGy3G016640	CmaCh18G012160	Cucurbita maxima (Rimu)	cgybcmaB352
CsGy3G016640	Cp4.1LG09g01190	Cucurbita pepo (Zucchini)	cgybcpeB287
CsGy3G016640	MELO3C006867.2	Melon (DHL92) v3.6.1	cgybmedB201
CsGy3G016640	CsaV3_3G016740	Cucumber (Chinese Long) v3	cgybcucB117
CsGy3G016640	Cla97C05G089710	Watermelon (97103) v2	cgybwmbB196
CsGy3G016640	Carg26812	Silver-seed gourd	carcgybB0006

The following gene(s) are paralogous to this gene:

None

The following block(s) are covering this gene:


Gene	Organism	Block
CsGy3G016640	Cucumber (Chinese Long) v3	cgybcucB135
CsGy3G016640	Watermelon (97103) v2	cgybwmbB172
CsGy3G016640	Watermelon (97103) v2	cgybwmbB216
CsGy3G016640	Wax gourd	cgybwgoB274
CsGy3G016640	Cucumber (Gy14) v2	cgybcgybB087
CsGy3G016640	Cucumber (Gy14) v2	cgybcgybB091
CsGy3G016640	Cucurbita maxima (Rimu)	cgybcmaB325
CsGy3G016640	Cucurbita maxima (Rimu)	cgybcmaB342
CsGy3G016640	Cucurbita maxima (Rimu)	cgybcmaB394
CsGy3G016640	Cucurbita maxima (Rimu)	cgybcmaB399
CsGy3G016640	Cucurbita maxima (Rimu)	cgybcmaB463
CsGy3G016640	Cucurbita moschata (Rifu)	cgybcmoB296
CsGy3G016640	Cucurbita moschata (Rifu)	cgybcmoB312
CsGy3G016640	Cucurbita moschata (Rifu)	cgybcmoB324
CsGy3G016640	Cucurbita moschata (Rifu)	cgybcmoB365
CsGy3G016640	Cucurbita moschata (Rifu)	cgybcmoB371
CsGy3G016640	Cucurbita moschata (Rifu)	cgybcmoB432
CsGy3G016640	Cucurbita pepo (Zucchini)	cgybcpeB314
CsGy3G016640	Cucurbita pepo (Zucchini)	cgybcpeB327
CsGy3G016640	Cucurbita pepo (Zucchini)	cgybcpeB427
CsGy3G016640	Cucumber (Chinese Long) v2	cgybcuB127
CsGy3G016640	Cucumber (Chinese Long) v2	cgybcuB128
CsGy3G016640	Bottle gourd (USVL1VR-Ls)	cgyblsiB141
CsGy3G016640	Bottle gourd (USVL1VR-Ls)	cgyblsiB197
CsGy3G016640	Melon (DHL92) v3.5.1	cgybmeB141
CsGy3G016640	Melon (DHL92) v3.6.1	cgybmedB137
CsGy3G016640	Watermelon (Charleston Gray)	cgybwcgB191
CsGy3G016640	Watermelon (Charleston Gray)	cgybwcgB203
CsGy3G016640	Watermelon (97103) v1	cgybwmB217
CsGy3G016640	Watermelon (97103) v1	cgybwmB246
CsGy3G016640	Wild cucumber (PI 183967)	cgybcpiB129
CsGy3G016640	Wild cucumber (PI 183967)	cgybcpiB130
CsGy3G016640	Silver-seed gourd	carcgybB0707
CsGy3G016640	Silver-seed gourd	carcgybB0859
CsGy3G016640	Silver-seed gourd	carcgybB0906
CsGy3G016640	Silver-seed gourd	carcgybB0926