CsGy3G010730 (gene) Cucumber (Gy14) v2

Overview
NameCsGy3G010730
Typegene
OrganismCucumis sativus (Cucumber (Gy14) v2)
DescriptionUncharacterized protein
LocationChr3 : 8418883 .. 8419703 (+)
Genome Viewer
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
ATGTTGGTCTGCTTTAAGCGTTTGAAGTATTGCTGTCCTTTTGTCTACGAGACAAGACACCCTGAATCTGTATCGAGCTTCTTTTACTACTTGATGTATGTTTAACTATGACCTTCTTTTACATGGTGAATTTTCGATAGAATTGTCTATTTGAACGAGAATTGTTAACTTAGGAATCAAAGTATGTTGGTATTTTCTCTTTTATATTTTGTTTTTTGTTTTTGGGTGCTGAAAGGCTAACCATGGTTGGGACTAAAGAGTTGATCTCATTTTGAGTTCCAAGTTAATATTTCCTAGGGTTCCTCCTATACACAATCAAAATACCTCTTGTTTTAGGCTAGAATTTTTAGTGCTCACACTAGAAGTTCTTTTGATGTAGCCGCTGCATGGGTTTCATTTTAATATCCATTTGAATGGGCGTTGGACCTGTTCTATCCAATATACATGCAGGTTATTCGGGGTGATTGTCATTGGAGGTTTGTCAGGGTTGATTTTCTCTTGTTTACACGAAGGTATGCTTTTGCAGTGGGAAGTTATTAACAGCAACCTTCCATTTAACTCCTGGATCATTTACACGATGATTAGTATATTTGGAACATTATTCTTTTTTTTACGCAGTACAATTTGCTCTGGTGCTGTTGTCTTCTTCCCTCATATCTCTTCTTTCTTCTTTCTTTTTTTTTTTTTCCTTTTTTTCCTCTTTCCTCTTTTCCTCCAATCTCCAAAATTTTATTTCGTTAGGCAAAGGTATCATTAAAGGTCGGTTGAAACCAGATGTTGCTGAGATAAATTGCATCAAAATTTCCTCCTTCTGGGTATGA

mRNA sequence

ATGTTGGTCTGCTTTAAGCGTTTGAAGTATTGCTGTCCTTTTGTCTACGAGACAAGACACCCTGAATCTGTATCGAGCTTCTTTTACTACTTGATGTTATTCGGGGTGATTGTCATTGGAGGTTTGTCAGGGTTGATTTTCTCTTGTTTACACGAAGGCAAAGGTATCATTAAAGGTCGGTTGAAACCAGATGTTGCTGAGATAAATTGCATCAAAATTTCCTCCTTCTGGGTATGA

Coding sequence (CDS)

ATGTTGGTCTGCTTTAAGCGTTTGAAGTATTGCTGTCCTTTTGTCTACGAGACAAGACACCCTGAATCTGTATCGAGCTTCTTTTACTACTTGATGTTATTCGGGGTGATTGTCATTGGAGGTTTGTCAGGGTTGATTTTCTCTTGTTTACACGAAGGCAAAGGTATCATTAAAGGTCGGTTGAAACCAGATGTTGCTGAGATAAATTGCATCAAAATTTCCTCCTTCTGGGTATGA

Protein sequence

MLVCFKRLKYCCPFVYETRHPESVSSFFYYLMLFGVIVIGGLSGLIFSCLHEGKGIIKGRLKPDVAEINCIKISSFWV
Homology
[Close]
BLAST of CsGy3G010730 vs. NCBI nr
Match: KGN56716.1 (hypothetical protein Csa_3G129730 [Cucumis sativus])

HSP 1 Score: 166.8 bits (421), Expect = 3.0e-38
Identity = 78/78 (100.00%), Postives = 78/78 (100.00%), Query Frame = 0 

Query: 1  MLVCFKRLKYCCPFVYETRHPESVSSFFYYLMLFGVIVIGGLSGLIFSCLHEGKGIIKGR 60
          MLVCFKRLKYCCPFVYETRHPESVSSFFYYLMLFGVIVIGGLSGLIFSCLHEGKGIIKGR
Sbjct: 1  MLVCFKRLKYCCPFVYETRHPESVSSFFYYLMLFGVIVIGGLSGLIFSCLHEGKGIIKGR 60

Query: 61 LKPDVAEINCIKISSFWV 79
          LKPDVAEINCIKISSFWV
Sbjct: 61 LKPDVAEINCIKISSFWV 78

[Close]
BLAST of CsGy3G010730 vs. TrEMBL
Match: tr|A0A0A0L9C6|A0A0A0L9C6_CUCSA (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_3G129730 PE=4 SV=1)

HSP 1 Score: 166.8 bits (421), Expect = 2.0e-38
Identity = 78/78 (100.00%), Postives = 78/78 (100.00%), Query Frame = 0 

Query: 1  MLVCFKRLKYCCPFVYETRHPESVSSFFYYLMLFGVIVIGGLSGLIFSCLHEGKGIIKGR 60
          MLVCFKRLKYCCPFVYETRHPESVSSFFYYLMLFGVIVIGGLSGLIFSCLHEGKGIIKGR
Sbjct: 1  MLVCFKRLKYCCPFVYETRHPESVSSFFYYLMLFGVIVIGGLSGLIFSCLHEGKGIIKGR 60

Query: 61 LKPDVAEINCIKISSFWV 79
          LKPDVAEINCIKISSFWV
Sbjct: 61 LKPDVAEINCIKISSFWV 78

The following BLAST results are available for this feature:
BLAST of CsGy3G010730 vs. NCBI nr
Match NameE-valueIdentityDescription
KGN56716.13.0e-38100.00hypothetical protein Csa_3G129730 [Cucumis sativus][more]
BLAST of CsGy3G010730 vs. TAIR10
Match NameE-valueIdentityDescription
BLAST of CsGy3G010730 vs. Swiss-Prot
Match NameE-valueIdentityDescription
BLAST of CsGy3G010730 vs. TrEMBL
Match NameE-valueIdentityDescription
tr|A0A0A0L9C6|A0A0A0L9C6_CUCSA2.0e-38100.00Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_3G129730 PE=4 SV=1[more]
GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
Category Term Accession Term Name
biological_process GO:0008150 biological_process
cellular_component GO:0016021 integral component of membrane
molecular_function GO:0003674 molecular_function
Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
CsGy3G010730.1CsGy3G010730.1mRNA


Synteny
The following gene(s) are orthologous to this gene:
GeneOrthologueOrganismBlock
CsGy3G010730Csa3G129730Cucumber (Chinese Long) v2cgybcuB109
CsGy3G010730Lsi05G018570Bottle gourd (USVL1VR-Ls)cgyblsiB196
CsGy3G010730Cp4.1LG03g17930Cucurbita pepo (Zucchini)cgybcpeB406
The following gene(s) are paralogous to this gene:

None

The following block(s) are covering this gene:
GeneOrganismBlock
CsGy3G010730Cucumber (Chinese Long) v3cgybcucB117
CsGy3G010730Watermelon (97103) v2cgybwmbB196
CsGy3G010730Watermelon (97103) v2cgybwmbB222
CsGy3G010730Wax gourdcgybwgoB242
CsGy3G010730Wax gourdcgybwgoB258
CsGy3G010730Cucumber (Gy14) v2cgybcgybB054
CsGy3G010730Cucurbita maxima (Rimu)cgybcmaB318
CsGy3G010730Cucurbita maxima (Rimu)cgybcmaB345
CsGy3G010730Cucurbita maxima (Rimu)cgybcmaB427
CsGy3G010730Cucurbita moschata (Rifu)cgybcmoB290
CsGy3G010730Cucurbita moschata (Rifu)cgybcmoB317
CsGy3G010730Cucurbita moschata (Rifu)cgybcmoB401
CsGy3G010730Cucurbita pepo (Zucchini)cgybcpeB454
CsGy3G010730Bottle gourd (USVL1VR-Ls)cgyblsiB136
CsGy3G010730Melon (DHL92) v3.5.1cgybmeB195
CsGy3G010730Melon (DHL92) v3.5.1cgybmeB200
CsGy3G010730Melon (DHL92) v3.6.1cgybmedB201
CsGy3G010730Watermelon (Charleston Gray)cgybwcgB203
CsGy3G010730Watermelon (Charleston Gray)cgybwcgB230
CsGy3G010730Watermelon (97103) v1cgybwmB217
CsGy3G010730Wild cucumber (PI 183967)cgybcpiB109
CsGy3G010730Wild cucumber (PI 183967)cgybcpiB110
CsGy3G010730Silver-seed gourdcarcgybB0187
CsGy3G010730Silver-seed gourdcarcgybB0245
CsGy3G010730Silver-seed gourdcarcgybB0948
CsGy3G010730Silver-seed gourdcarcgybB1059