CsGy3G010730.1 (mRNA) Cucumber (Gy14) v2

Overview
NameCsGy3G010730.1
TypemRNA
OrganismCucumis sativus (Cucumber (Gy14) v2)
DescriptionUncharacterized protein
LocationChr3 : 8418883 .. 8419703 (+)
Sequence length237
Genome Viewer
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
ATGTTGGTCTGCTTTAAGCGTTTGAAGTATTGCTGTCCTTTTGTCTACGAGACAAGACACCCTGAATCTGTATCGAGCTTCTTTTACTACTTGATGTATGTTTAACTATGACCTTCTTTTACATGGTGAATTTTCGATAGAATTGTCTATTTGAACGAGAATTGTTAACTTAGGAATCAAAGTATGTTGGTATTTTCTCTTTTATATTTTGTTTTTTGTTTTTGGGTGCTGAAAGGCTAACCATGGTTGGGACTAAAGAGTTGATCTCATTTTGAGTTCCAAGTTAATATTTCCTAGGGTTCCTCCTATACACAATCAAAATACCTCTTGTTTTAGGCTAGAATTTTTAGTGCTCACACTAGAAGTTCTTTTGATGTAGCCGCTGCATGGGTTTCATTTTAATATCCATTTGAATGGGCGTTGGACCTGTTCTATCCAATATACATGCAGGTTATTCGGGGTGATTGTCATTGGAGGTTTGTCAGGGTTGATTTTCTCTTGTTTACACGAAGGTATGCTTTTGCAGTGGGAAGTTATTAACAGCAACCTTCCATTTAACTCCTGGATCATTTACACGATGATTAGTATATTTGGAACATTATTCTTTTTTTTACGCAGTACAATTTGCTCTGGTGCTGTTGTCTTCTTCCCTCATATCTCTTCTTTCTTCTTTCTTTTTTTTTTTTTCCTTTTTTTCCTCTTTCCTCTTTTCCTCCAATCTCCAAAATTTTATTTCGTTAGGCAAAGGTATCATTAAAGGTCGGTTGAAACCAGATGTTGCTGAGATAAATTGCATCAAAATTTCCTCCTTCTGGGTATGA

mRNA sequence

ATGTTGGTCTGCTTTAAGCGTTTGAAGTATTGCTGTCCTTTTGTCTACGAGACAAGACACCCTGAATCTGTATCGAGCTTCTTTTACTACTTGATGTTATTCGGGGTGATTGTCATTGGAGGTTTGTCAGGGTTGATTTTCTCTTGTTTACACGAAGGCAAAGGTATCATTAAAGGTCGGTTGAAACCAGATGTTGCTGAGATAAATTGCATCAAAATTTCCTCCTTCTGGGTATGA

Coding sequence (CDS)

ATGTTGGTCTGCTTTAAGCGTTTGAAGTATTGCTGTCCTTTTGTCTACGAGACAAGACACCCTGAATCTGTATCGAGCTTCTTTTACTACTTGATGTTATTCGGGGTGATTGTCATTGGAGGTTTGTCAGGGTTGATTTTCTCTTGTTTACACGAAGGCAAAGGTATCATTAAAGGTCGGTTGAAACCAGATGTTGCTGAGATAAATTGCATCAAAATTTCCTCCTTCTGGGTATGA

Protein sequence

MLVCFKRLKYCCPFVYETRHPESVSSFFYYLMLFGVIVIGGLSGLIFSCLHEGKGIIKGRLKPDVAEINCIKISSFWV
Homology
[Close]
BLAST of CsGy3G010730.1 vs. NCBI nr
Match: KGN56716.1 (hypothetical protein Csa_3G129730 [Cucumis sativus])

HSP 1 Score: 166.8 bits (421), Expect = 3.0e-38
Identity = 78/78 (100.00%), Postives = 78/78 (100.00%), Query Frame = 0 

Query: 1  MLVCFKRLKYCCPFVYETRHPESVSSFFYYLMLFGVIVIGGLSGLIFSCLHEGKGIIKGR 60
          MLVCFKRLKYCCPFVYETRHPESVSSFFYYLMLFGVIVIGGLSGLIFSCLHEGKGIIKGR
Sbjct: 1  MLVCFKRLKYCCPFVYETRHPESVSSFFYYLMLFGVIVIGGLSGLIFSCLHEGKGIIKGR 60

Query: 61 LKPDVAEINCIKISSFWV 79
          LKPDVAEINCIKISSFWV
Sbjct: 61 LKPDVAEINCIKISSFWV 78

[Close]
BLAST of CsGy3G010730.1 vs. TrEMBL
Match: tr|A0A0A0L9C6|A0A0A0L9C6_CUCSA (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_3G129730 PE=4 SV=1)

HSP 1 Score: 166.8 bits (421), Expect = 2.0e-38
Identity = 78/78 (100.00%), Postives = 78/78 (100.00%), Query Frame = 0 

Query: 1  MLVCFKRLKYCCPFVYETRHPESVSSFFYYLMLFGVIVIGGLSGLIFSCLHEGKGIIKGR 60
          MLVCFKRLKYCCPFVYETRHPESVSSFFYYLMLFGVIVIGGLSGLIFSCLHEGKGIIKGR
Sbjct: 1  MLVCFKRLKYCCPFVYETRHPESVSSFFYYLMLFGVIVIGGLSGLIFSCLHEGKGIIKGR 60

Query: 61 LKPDVAEINCIKISSFWV 79
          LKPDVAEINCIKISSFWV
Sbjct: 61 LKPDVAEINCIKISSFWV 78

The following BLAST results are available for this feature:
BLAST of CsGy3G010730.1 vs. NCBI nr
Match NameE-valueIdentityDescription
KGN56716.13.0e-38100.00hypothetical protein Csa_3G129730 [Cucumis sativus][more]
BLAST of CsGy3G010730.1 vs. TAIR10
Match NameE-valueIdentityDescription
BLAST of CsGy3G010730.1 vs. Swiss-Prot
Match NameE-valueIdentityDescription
BLAST of CsGy3G010730.1 vs. TrEMBL
Match NameE-valueIdentityDescription
tr|A0A0A0L9C6|A0A0A0L9C6_CUCSA2.0e-38100.00Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_3G129730 PE=4 SV=1[more]
GO Annotation
GO Assignments
This mRNA is annotated with the following GO terms.
Category Term Accession Term Name
biological_process GO:0008150 biological_process
cellular_component GO:0016021 integral component of membrane
molecular_function GO:0003674 molecular_function
Relationships

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameType
CsGy3G010730CsGy3G010730gene


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameType
CsGy3G010730.1CsGy3G010730.1-proteinpolypeptide


The following exon feature(s) are a part of this mRNA:

Feature NameUnique NameType
CsGy3G010730.1.exon.1CsGy3G010730.1.exon.1exon
CsGy3G010730.1.exon.2CsGy3G010730.1.exon.2exon
CsGy3G010730.1.exon.3CsGy3G010730.1.exon.3exon


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameType
CsGy3G010730.1.CDS.1CsGy3G010730.1.CDS.1CDS
CsGy3G010730.1.CDS.2CsGy3G010730.1.CDS.2CDS
CsGy3G010730.1.CDS.3CsGy3G010730.1.CDS.3CDS