CsGy3G009570 (gene) Cucumber (Gy14) v2

Overview
NameCsGy3G009570
Typegene
OrganismCucumis sativus (Cucumber (Gy14) v2)
DescriptionTetratricopeptide repeat (TPR)-like superfamily protein
LocationChr3 : 7698067 .. 7701670 (+)
Genome Viewer
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: five_prime_UTRexonCDSthree_prime_UTR
Hold the cursor over a type above to highlight its positions in the sequence below.
GGAAGATGTAGAGCAGCGGACAGTCACGAAAGAGGGAAACAGAGAGAGTGAAGCGGCGTTCGACGGCGAGTTCCAAACGGAGTTCGACGGAGCACGTTCGTCGGTGAGTTTTCGTATAATACCGACAGCAAACGGTGCTTCTTTGCGGCATTATTTGGGCAGAAGCAGATTTTCTTCAGAGTTCGCATTTTCATTTCCCAATTCTCTCCACCGCTTAATCGAATCGTGGAATTGGAACAACACACTTTCCTTTTTTTTTTTTGAATTTTTTCTCGTTGAGTACGATGCAAATCTCCACCAGTAACATTCTCTATCAACTTCATCTTCCTCTTGTTAATGGAACTTCAAATACTTCGTATTCTCGTTACTGGAGGGATTCAATAGTCTTGAGCTCTCGCCGAAGATGCTCTCAAATGGCTACTGCTACGGCCATTGTTGATGAAATTCACAAATTAGAAAGTGAAAGAGAGAAACCGAGGTTTCGGTGGGTCGAGGTTGGGTATGATATTACTGAAACGCAGAAGCAGGCTATATCTCAGCTTCCTCCCAAGATGACTAAAAGATGTAAGGCTGTGATGAAGCAAATTATATGTTTCTCACCTCAAAAGGGTGAGTTATCAGATATGTTGGCGGCTTGGGTGAGGATTATGAAGCCTGAAAGAGCTGACTGGCTTTTGGTTCTTAAGCATTTGAGGATTTTGAATCATCCTCTCTATATCCAGGTATGTTAAATCTCCTATAGTTTCAAGAACAAGCTTAGTCCATCAACATTAAGTTTGTTTGTTTATAAATTTTATAAATTAATTCATCTACTGAAATCAATTCGAATTCTATGTTCATGAAACACTAAACTTCCGATTTTGTGTCTGTTGGCCAAAACACTCGTGGATAAAAGAAAGACATGGGTTCAACTTAACGGAAACTTATCAGTTGAGCAACCAAATATTATAAGTTCAAACAATCAAATAGTTGCATTTACTCAATTTGGATACTGAATTTGAAAACTATATATAATTTTTCAATTACTGTACGTAATTTCTAAAAGCTGGTTTTTTTATATAAAAAAATTGCTAAGAGTTCAAATGCTTCCTTAAGAAACGTAAAAATGTGAAAAAACGATAGTACATTTCACAAGTTAAATGGTTATCAAACGGGATCTAAGGAATTGGTGATATCTCATGGCTAAGGTAATGTGCCATTGCTCTTAGGTGGCAGAAGCTGCTCTTGAAGAGATAACATTTGAAGCCAATACTCGAGACTACACGAAGATTATTCATCACTATGGGAAGCAAAACCAACTCGAGGATGCTGAAAAAGTTCTCTTAAGCATGAGAGAAAGGGGTTTTGTTTGTGATCAGATAACATTAACCACAATGATCCACATATATAGCAAGGCTGACAAACTTAATCTAGCCAAACAAACTTTTGAAGAGCTCAAACTGCTTGAGCAACCGTTGGATAAAAGATCGTTTGGTGCAATGATTATGGCATATGTCAGGGCTGGGTTTCCCGAGGAAGGAGAAAAAATTCTGAAAGAAATGGATGCAAAAGATATTTATGCAGGAAGCGAAGTCTACAAGGCTTTGTTAAGAGCATACTCCATGGTAGGCAATGCTGAAGGAGCCCAAAGAGTATTCGATGCAATTCAATTGGCTGCTATTACTCCTGATGAAAAGCTATGCGGTCTTTTGATCAATGCCTATCTGATGGCCGGTCAAAGCCGAGAGGCACAAATTGCTTTTGACAACATGAGGAGGGCAGGCATTGAACCTAGTGACAAATGCATAGCTTTGGCATTAAGTGCATATGAAAAGGAGAACAGGCTAAATTCAGCGTTGGAACTTCTAATAGATTTGGAGAAGGATAACGTTATGGTCGGGAAGGAAGCTTCAAAAATATTAGCAGCTTGGCTTAAACGATTAGGGGTGGTGGAAGAGGTTGAAATTGTGTTGAGAGAATACACTGAAAAAGAAGTGAACCGCTAAGGTACATACACACCCTTGCGAAAATTCTCGTTTCTTATTGAATTGATGTATAAAAGAACACAAATTTTCCGCTTTCATTTCTTTTTCAAGGGTAGTGGTTGCATAATTTTCAAACTGAAAAAGTACACACAATAAGAATTTAACAAGCCCGTTATTGAAACTTTCAAGTTGACGTTTAATTTATTGATCAGCAGGAGAAACCATGAGATTAGCAGTCCAATTAGCCATTAAGCTCGTTTAGGGATGTTTGGAAATAGAGAGGCACCAATGCGTTGCATCGAAGACAGTTGTTTTTGGACAACTTGTTGATCAATGCTGCCCATGGATGGGAAATTGTTGCTTCCAATTTGGTATGATTCCAATGGAGACTGCAATTTTTCCTGTGAAACTTGCTCGACAGGATCGAGAAGTAGAGAAAGATCTGATTCAGCAGGAAAAGAAGGGCAATCTGATGGAAGGCTTATAATTGAGGATAGAGTTGGCTTCTTGACCAGAGCTGGTGGTTGTGCCTGAAGATGGGGTGCGGATCTTGGAAGCTCAGATGTTGCTAGGTACGCTTGCAAATATGAGATCTCTATTTGCAACCTTGCAGCCTAAAAAGAAATGTATATCACTCAAATTCTGGCATTTATGTGAAACTGAAATTGAAAACTAAACATCGAATCCGTACTAGTCTGTTTCTCATATGTAGATGATATATGATAATAAGTTCACAATTAAGGCTCCATTTGATAATTGTTTAGTCTTTTAAAATTGTGCCAGTTTTCATAAGAAGCATTTGGATTTCCATAAGCTTAACCTTTTGGCAACCAACAATCAGAAGTCAAATGTTTGTTTTCACCTGTTGTTGAAGGGCAAAGATATGAGAAACACAGCCCAAAACTGGCTCTCTGACTCGAGCTTGTGCTTCGTAACATATAGTTATAGCTGCATCAAGCCGTTTATGTTCAGGAATATGTAGAAGCATCTTTGACACATTGCTTGCTCCAAACACCTTGTGCACAGCTGCAAAATGAGTTGAACCTTGTTCGGAGTCAAAGTAGGGTGCAAATATACACTCTGGCATACACTTCCTCCGCAGAAACTTGCACGCCCCACACGGTCCACCACTACCGTTGCTGCCACCACCCTTGCCTTTTGTGCAACTTCCACCACTCCGCCTCGAGCTCATCTCAACCTTGCTTGCTTGAGTTCTTTCAGGAAAACCTAAGCAAAGCTTACTGGAAGACAAGACAAATATGTATACACACACACATATATATGTGTGGAGCTGACTTTGAGGTTTGTGGATCACAAGGTATATAATTCTTCTTTTCTTTCCATTTACATTTCTCTCTCTCTCTCTCTTAGTTTGATGGGATTTGCAAATTAGAAGGAAATGTAGGTTTTGGAAGATTGAAACATAGTTTTATTATTGAAATAACAATAATAATTATTATTATTTTGGAATAGCATAGGTCTCTTTTTGTAGTAATATTATGAAATTCCGCCAAACTGCTTGTGTTTTTAAAGCTGCGTGGAGTGAGGGGTACGAGGACCTCGAATAATGTTTCTTTTTTTTAAATAAAATAAAAACTTATTATCGATAATTTTGTAACTTTAGAAAATATAGAAAATGT

mRNA sequence

GGAAGATGTAGAGCAGCGGACAGTCACGAAAGAGGGAAACAGAGAGAGTGAAGCGGCGTTCGACGGCGAGTTCCAAACGGAGTTCGACGGAGCACGTTCGTCGGTGAGTTTTCGTATAATACCGACAGCAAACGGTGCTTCTTTGCGGCATTATTTGGGCAGAAGCAGATTTTCTTCAGAGTTCGCATTTTCATTTCCCAATTCTCTCCACCGCTTAATCGAATCGTGGAATTGGAACAACACACTTTCCTTTTTTTTTTTTGAATTTTTTCTCGTTGAGTACGATGCAAATCTCCACCAGTAACATTCTCTATCAACTTCATCTTCCTCTTGTTAATGGAACTTCAAATACTTCGTATTCTCGTTACTGGAGGGATTCAATAGTCTTGAGCTCTCGCCGAAGATGCTCTCAAATGGCTACTGCTACGGCCATTGTTGATGAAATTCACAAATTAGAAAGTGAAAGAGAGAAACCGAGGTTTCGGTGGGTCGAGGTTGGGTATGATATTACTGAAACGCAGAAGCAGGCTATATCTCAGCTTCCTCCCAAGATGACTAAAAGATGTAAGGCTGTGATGAAGCAAATTATATGTTTCTCACCTCAAAAGGGTGAGTTATCAGATATGTTGGCGGCTTGGGTGAGGATTATGAAGCCTGAAAGAGCTGACTGGCTTTTGGTTCTTAAGCATTTGAGGATTTTGAATCATCCTCTCTATATCCAGGTGGCAGAAGCTGCTCTTGAAGAGATAACATTTGAAGCCAATACTCGAGACTACACGAAGATTATTCATCACTATGGGAAGCAAAACCAACTCGAGGATGCTGAAAAAGTTCTCTTAAGCATGAGAGAAAGGGGTTTTGTTTGTGATCAGATAACATTAACCACAATGATCCACATATATAGCAAGGCTGACAAACTTAATCTAGCCAAACAAACTTTTGAAGAGCTCAAACTGCTTGAGCAACCGTTGGATAAAAGATCGTTTGGTGCAATGATTATGGCATATGTCAGGGCTGGGTTTCCCGAGGAAGGAGAAAAAATTCTGAAAGAAATGGATGCAAAAGATATTTATGCAGGAAGCGAAGTCTACAAGGCTTTGTTAAGAGCATACTCCATGGTAGGCAATGCTGAAGGAGCCCAAAGAGTATTCGATGCAATTCAATTGGCTGCTATTACTCCTGATGAAAAGCTATGCGGTCTTTTGATCAATGCCTATCTGATGGCCGGTCAAAGCCGAGAGGCACAAATTGCTTTTGACAACATGAGGAGGGCAGGCATTGAACCTAGTGACAAATGCATAGCTTTGGCATTAAGTGCATATGAAAAGGAGAACAGGCTAAATTCAGCGTTGGAACTTCTAATAGATTTGGAGAAGGATAACGTTATGGTCGGGAAGGAAGCTTCAAAAATATTAGCAGCTTGGCTTAAACGATTAGGGGTGGTGGAAGAGGTTGAAATTGTGTTGAGAGAATACACTGAAAAAGAAGTGAACCGCTAAGCAGGAGAAACCATGAGATTAGCAGTCCAATTAGCCATTAAGCTCGTTTAGGGATGTTTGGAAATAGAGAGGCACCAATGCGTTGCATCGAAGACAGTTGTTTTTGGACAACTTGTTGATCAATGCTGCCCATGGATGGGAAATTGTTGCTTCCAATTTGGTATGATTCCAATGGAGACTGCAATTTTTCCTGTGAAACTTGCTCGACAGGATCGAGAAGTAGAGAAAGATCTGATTCAGCAGGAAAAGAAGGGCAATCTGATGGAAGGCTTATAATTGAGGATAGAGTTGGCTTCTTGACCAGAGCTGGTGGTTGTGCCTGAAGATGGGGTGCGGATCTTGGAAGCTCAGATGTTGCTAGGTACGCTTGCAAATATGAGATCTCTATTTGCAACCTTGCAGCCTAAAAAGAAATGTATATCACTCAAATTCTGGCATTTATGTGAAACTGAAATTGAAAACTAAACATCGAATCCGTACTAGTCTGTTTCTCATATGTAGATGATATATGATAATAAGTTCACAATTAAGGCTCCATTTGATAATTGTTTAGTCTTTTAAAATTGTGCCAGTTTTCATAAGAAGCATTTGGATTTCCATAAGCTTAACCTTTTGGCAACCAACAATCAGAAGTCAAATGTTTGTTTTCACCTGTTGTTGAAGGGCAAAGATATGAGAAACACAGCCCAAAACTGGCTCTCTGACTCGAGCTTGTGCTTCGTAACATATAGTTATAGCTGCATCAAGCCGTTTATGTTCAGGAATATGTAGAAGCATCTTTGACACATTGCTTGCTCCAAACACCTTGTGCACAGCTGCAAAATGAGTTGAACCTTGTTCGGAGTCAAAGTAGGGTGCAAATATACACTCTGGCATACACTTCCTCCGCAGAAACTTGCACGCCCCACACGGTCCACCACTACCGTTGCTGCCACCACCCTTGCCTTTTGTGCAACTTCCACCACTCCGCCTCGAGCTCATCTCAACCTTGCTTGCTTGAGTTCTTTCAGGAAAACCTAAGCAAAGCTTACTGGAAGACAAGACAAATATGTATACACACACACATATATATGTGTGGAGCTGACTTTGAGGTTTGTGGATCACAAGGTATATAATTCTTCTTTTCTTTCCATTTACATTTCTCTCTCTCTCTCTCTTAGTTTGATGGGATTTGCAAATTAGAAGGAAATGTAGGTTTTGGAAGATTGAAACATAGTTTTATTATTGAAATAACAATAATAATTATTATTATTTTGGAATAGCATAGGTCTCTTTTTGTAGTAATATTATGAAATTCCGCCAAACTGCTTGTGTTTTTAAAGCTGCGTGGAGTGAGGGGTACGAGGACCTCGAATAATGTTTCTTTTTTTTAAATAAAATAAAAACTTATTATCGATAATTTTGTAACTTTAGAAAATATAGAAAATGT

Coding sequence (CDS)

ATGCAAATCTCCACCAGTAACATTCTCTATCAACTTCATCTTCCTCTTGTTAATGGAACTTCAAATACTTCGTATTCTCGTTACTGGAGGGATTCAATAGTCTTGAGCTCTCGCCGAAGATGCTCTCAAATGGCTACTGCTACGGCCATTGTTGATGAAATTCACAAATTAGAAAGTGAAAGAGAGAAACCGAGGTTTCGGTGGGTCGAGGTTGGGTATGATATTACTGAAACGCAGAAGCAGGCTATATCTCAGCTTCCTCCCAAGATGACTAAAAGATGTAAGGCTGTGATGAAGCAAATTATATGTTTCTCACCTCAAAAGGGTGAGTTATCAGATATGTTGGCGGCTTGGGTGAGGATTATGAAGCCTGAAAGAGCTGACTGGCTTTTGGTTCTTAAGCATTTGAGGATTTTGAATCATCCTCTCTATATCCAGGTGGCAGAAGCTGCTCTTGAAGAGATAACATTTGAAGCCAATACTCGAGACTACACGAAGATTATTCATCACTATGGGAAGCAAAACCAACTCGAGGATGCTGAAAAAGTTCTCTTAAGCATGAGAGAAAGGGGTTTTGTTTGTGATCAGATAACATTAACCACAATGATCCACATATATAGCAAGGCTGACAAACTTAATCTAGCCAAACAAACTTTTGAAGAGCTCAAACTGCTTGAGCAACCGTTGGATAAAAGATCGTTTGGTGCAATGATTATGGCATATGTCAGGGCTGGGTTTCCCGAGGAAGGAGAAAAAATTCTGAAAGAAATGGATGCAAAAGATATTTATGCAGGAAGCGAAGTCTACAAGGCTTTGTTAAGAGCATACTCCATGGTAGGCAATGCTGAAGGAGCCCAAAGAGTATTCGATGCAATTCAATTGGCTGCTATTACTCCTGATGAAAAGCTATGCGGTCTTTTGATCAATGCCTATCTGATGGCCGGTCAAAGCCGAGAGGCACAAATTGCTTTTGACAACATGAGGAGGGCAGGCATTGAACCTAGTGACAAATGCATAGCTTTGGCATTAAGTGCATATGAAAAGGAGAACAGGCTAAATTCAGCGTTGGAACTTCTAATAGATTTGGAGAAGGATAACGTTATGGTCGGGAAGGAAGCTTCAAAAATATTAGCAGCTTGGCTTAAACGATTAGGGGTGGTGGAAGAGGTTGAAATTGTGTTGAGAGAATACACTGAAAAAGAAGTGAACCGCTAA

Protein sequence

MQISTSNILYQLHLPLVNGTSNTSYSRYWRDSIVLSSRRRCSQMATATAIVDEIHKLESEREKPRFRWVEVGYDITETQKQAISQLPPKMTKRCKAVMKQIICFSPQKGELSDMLAAWVRIMKPERADWLLVLKHLRILNHPLYIQVAEAALEEITFEANTRDYTKIIHHYGKQNQLEDAEKVLLSMRERGFVCDQITLTTMIHIYSKADKLNLAKQTFEELKLLEQPLDKRSFGAMIMAYVRAGFPEEGEKILKEMDAKDIYAGSEVYKALLRAYSMVGNAEGAQRVFDAIQLAAITPDEKLCGLLINAYLMAGQSREAQIAFDNMRRAGIEPSDKCIALALSAYEKENRLNSALELLIDLEKDNVMVGKEASKILAAWLKRLGVVEEVEIVLREYTEKEVNR
Homology
[Close]
BLAST of CsGy3G009570 vs. NCBI nr
Match: XP_004134345.1 (PREDICTED: pentatricopeptide repeat-containing protein At1g01970 [Cucumis sativus] >XP_011650789.1 PREDICTED: pentatricopeptide repeat-containing protein At1g01970 [Cucumis sativus] >KGN56592.1 hypothetical protein Csa_3G126080 [Cucumis sativus])

HSP 1 Score: 409.1 bits (1050), Expect = 1.8e-110
Identity = 404/404 (100.00%), Postives = 404/404 (100.00%), Query Frame = 0 

Query: 1   MQISTSNILYQLHLPLVNGTSNTSYSRYWRDSIVLSSRRRCSQMATATAIVDEIHKLESE 60
           MQISTSNILYQLHLPLVNGTSNTSYSRYWRDSIVLSSRRRCSQMATATAIVDEIHKLESE
Sbjct: 1   MQISTSNILYQLHLPLVNGTSNTSYSRYWRDSIVLSSRRRCSQMATATAIVDEIHKLESE 60

Query: 61  REKPRFRWVEVGYDITETQKQAISQLPPKMTKRCKAVMKQIICFSPQKGELSDMLAAWVR 120
           REKPRFRWVEVGYDITETQKQAISQLPPKMTKRCKAVMKQIICFSPQKGELSDMLAAWVR
Sbjct: 61  REKPRFRWVEVGYDITETQKQAISQLPPKMTKRCKAVMKQIICFSPQKGELSDMLAAWVR 120

Query: 121 IMKPERADWLLVLKHLRILNHPLYIQVAEAALEEITFEANTRDYTKIIHHYGKQNQLEDA 180
           IMKPERADWLLVLKHLRILNHPLYIQVAEAALEEITFEANTRDYTKIIHHYGKQNQLEDA
Sbjct: 121 IMKPERADWLLVLKHLRILNHPLYIQVAEAALEEITFEANTRDYTKIIHHYGKQNQLEDA 180

Query: 181 EKVLLSMXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX 240
           EKVLLSMXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX
Sbjct: 181 EKVLLSMXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX 240

Query: 241 XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX 300
           XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX
Sbjct: 241 XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX 300

Query: 301 XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXRLNSALELLI 360
           XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXRLNSALELLI
Sbjct: 301 XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXRLNSALELLI 360

Query: 361 DLEKDNVMVGKEASKILAAWLKRLGVVEEVEIVLREYTEKEVNR 405
           DLEKDNVMVGKEASKILAAWLKRLGVVEEVEIVLREYTEKEVNR
Sbjct: 361 DLEKDNVMVGKEASKILAAWLKRLGVVEEVEIVLREYTEKEVNR 404

[Close]
BLAST of CsGy3G009570 vs. NCBI nr
Match: XP_008438151.1 (PREDICTED: pentatricopeptide repeat-containing protein At1g01970 [Cucumis melo] >XP_008438152.1 PREDICTED: pentatricopeptide repeat-containing protein At1g01970 [Cucumis melo])

HSP 1 Score: 384.4 bits (986), Expect = 4.7e-103
Identity = 384/404 (95.05%), Postives = 393/404 (97.28%), Query Frame = 0 

Query: 1   MQISTSNILYQLHLPLVNGTSNTSYSRYWRDSIVLSSRRRCSQMATATAIVDEIHKLESE 60
           M ISTSNILYQLHLPLVNGTSNTS SRYW+DSIVL+SRRRCSQMAT TAIVDE+HKLESE
Sbjct: 1   MHISTSNILYQLHLPLVNGTSNTSSSRYWKDSIVLNSRRRCSQMATVTAIVDELHKLESE 60

Query: 61  REKPRFRWVEVGYDITETQKQAISQLPPKMTKRCKAVMKQIICFSPQKGELSDMLAAWVR 120
           REKPRFRWVEVGY+ITETQKQAISQLPPKMTK+CKAVMKQIICFSPQKGELSDMLAAWVR
Sbjct: 61  REKPRFRWVEVGYNITETQKQAISQLPPKMTKKCKAVMKQIICFSPQKGELSDMLAAWVR 120

Query: 121 IMKPERADWLLVLKHLRILNHPLYIQVAEAALEEITFEANTRDYTKIIHHYGKQNQLEDA 180
           IMKPERADWL VLKHLRILNHPLYIQVAEAAL EITFEANTRDYTKIIHHYGKQNQLEDA
Sbjct: 121 IMKPERADWLSVLKHLRILNHPLYIQVAEAALVEITFEANTRDYTKIIHHYGKQNQLEDA 180

Query: 181 EKVLLSMXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX 240
           EKVLL+M    XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX
Sbjct: 181 EKVLLTMRERGXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX 240

Query: 241 XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX 300
           XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX
Sbjct: 241 XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX 300

Query: 301 XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXRLNSALELLI 360
           XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX RLN+ALELLI
Sbjct: 301 XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXNRLNAALELLI 360

Query: 361 DLEKDNVMVGKEASKILAAWLKRLGVVEEVEIVLREYTEKEVNR 405
           DLEKDNVMVGKEAS+ILAAWLKRLGVVEE+EIVLREYT KEVNR
Sbjct: 361 DLEKDNVMVGKEASQILAAWLKRLGVVEEIEIVLREYTAKEVNR 404

[Close]
BLAST of CsGy3G009570 vs. NCBI nr
Match: XP_023526280.1 (pentatricopeptide repeat-containing protein At1g01970 isoform X1 [Cucurbita pepo subsp. pepo] >XP_023526281.1 pentatricopeptide repeat-containing protein At1g01970 isoform X1 [Cucurbita pepo subsp. pepo])

HSP 1 Score: 300.1 bits (767), Expect = 1.2e-77
Identity = 352/410 (85.85%), Postives = 373/410 (90.98%), Query Frame = 0 

Query: 1   MQISTSNILYQLH--LPLVNGTSNTSYSRYWRDSI-----VLSSRRRCSQMATATAIVDE 60
           M  S  NILYQ+H   PLVNGT+ +SYS Y R        VLS RRRC Q+AT  AIV+E
Sbjct: 1   MGTSVCNILYQIHPKQPLVNGTARSSYSCYCRGLTGRRLRVLSPRRRCYQLATVAAIVEE 60

Query: 61  IHKLESEREKPRFRWVEVGYDITETQKQAISQLPPKMTKRCKAVMKQIICFSPQKGELSD 120
           +H LES REKPRFRWVEVG DITE QKQAISQLPPKMTKRCKAVMKQIICFSPQ G LSD
Sbjct: 61  VHTLESGREKPRFRWVEVGSDITEMQKQAISQLPPKMTKRCKAVMKQIICFSPQNGNLSD 120

Query: 121 MLAAWVRIMKPERADWLLVLKHLRILNHPLYIQVAEAALEEITFEANTRDYTKIIHHYGK 180
           MLAAWVRIMKP+RADWL VLKHLRIL+HPLYI+VAEAAL E TFEA+TRDYTKIIH+YGK
Sbjct: 121 MLAAWVRIMKPKRADWLSVLKHLRILDHPLYIEVAEAALVERTFEASTRDYTKIIHYYGK 180

Query: 181 QNQLEDAEKVLLSMXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX 240
           +NQLEDAE++LLS XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX
Sbjct: 181 RNQLEDAERILLSXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX 240

Query: 241 XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX 300
           XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX
Sbjct: 241 XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX 300

Query: 301 XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXRLN 360
           XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX RLN
Sbjct: 301 XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXNRLN 360

Query: 361 SALELLIDLEKDNVMVGKEASKILAAWLKRLGVVEEVEIVLREYTEKEVN 404
           +ALELLIDLEK+ +MVGKEAS++LAAWLKRLGVVEEVE+VLREY  KE +
Sbjct: 361 AALELLIDLEKEKLMVGKEASEVLAAWLKRLGVVEEVELVLREYAVKEAS 410

[Close]
BLAST of CsGy3G009570 vs. NCBI nr
Match: XP_022980308.1 (pentatricopeptide repeat-containing protein At1g01970 [Cucurbita maxima] >XP_022980309.1 pentatricopeptide repeat-containing protein At1g01970 [Cucurbita maxima] >XP_022980310.1 pentatricopeptide repeat-containing protein At1g01970 [Cucurbita maxima] >XP_022980311.1 pentatricopeptide repeat-containing protein At1g01970 [Cucurbita maxima] >XP_022980312.1 pentatricopeptide repeat-containing protein At1g01970 [Cucurbita maxima] >XP_022980313.1 pentatricopeptide repeat-containing protein At1g01970 [Cucurbita maxima])

HSP 1 Score: 299.3 bits (765), Expect = 2.0e-77
Identity = 352/410 (85.85%), Postives = 372/410 (90.73%), Query Frame = 0 

Query: 1   MQISTSNILYQLH--LPLVNGTSNTSYSRYWRDSI-----VLSSRRRCSQMATATAIVDE 60
           M  S  NILYQ+H   PLVNGT+ +SYS Y R        VLS RR C Q+AT  AIV+E
Sbjct: 1   MGTSVCNILYQIHPKQPLVNGTARSSYSCYCRGLTGRRLRVLSPRRTCYQLATVAAIVEE 60

Query: 61  IHKLESEREKPRFRWVEVGYDITETQKQAISQLPPKMTKRCKAVMKQIICFSPQKGELSD 120
           +HKLES REKPRFRWVEVG DITE QKQAISQLPPKMTKRCKAVMKQIICF PQ G LSD
Sbjct: 61  VHKLESGREKPRFRWVEVGSDITEMQKQAISQLPPKMTKRCKAVMKQIICFLPQNGHLSD 120

Query: 121 MLAAWVRIMKPERADWLLVLKHLRILNHPLYIQVAEAALEEITFEANTRDYTKIIHHYGK 180
           MLAAWVRIMKP+RADWL VLKHLRIL+HPLYI+VAEAAL E TFEA+TRDYTKIIH+YGK
Sbjct: 121 MLAAWVRIMKPKRADWLSVLKHLRILDHPLYIEVAEAALVERTFEASTRDYTKIIHYYGK 180

Query: 181 QNQLEDAEKVLLSMXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX 240
           QNQLEDAE++LLS XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX
Sbjct: 181 QNQLEDAERILLSXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX 240

Query: 241 XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX 300
           XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX
Sbjct: 241 XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX 300

Query: 301 XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXRLN 360
           XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX RLN
Sbjct: 301 XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXNRLN 360

Query: 361 SALELLIDLEKDNVMVGKEASKILAAWLKRLGVVEEVEIVLREYTEKEVN 404
           +ALELLIDLEK+ +MVGKEAS++LAAWLKRLGVVEEVE+VLREY  KE +
Sbjct: 361 AALELLIDLEKEKLMVGKEASEVLAAWLKRLGVVEEVELVLREYAVKEAS 410

[Close]
BLAST of CsGy3G009570 vs. NCBI nr
Match: XP_023526282.1 (pentatricopeptide repeat-containing protein At1g01970 isoform X2 [Cucurbita pepo subsp. pepo])

HSP 1 Score: 298.1 bits (762), Expect = 4.4e-77
Identity = 217/410 (52.93%), Postives = 238/410 (58.05%), Query Frame = 0 

Query: 1   MQISTSNILYQLH--LPLVNGTSNTSYSRYWRDSI-----VLSSRRRCSQMATATAIVDE 60
           M  S  NILYQ+H   PLVNGT+ +SYS Y R        VLS RRRC Q+AT  AIV+E
Sbjct: 1   MGTSVCNILYQIHPKQPLVNGTARSSYSCYCRGLTGRRLRVLSPRRRCYQLATVAAIVEE 60

Query: 61  IHKLESEREKPRFRWVEVGYDITETQKQAISQLPPKMTKRCKAVMKQIICFSPQKGELSD 120
           +H LES REKPRFRWVEVG DITE QKQAISQLPPKMTKRCKAVMKQIICFSPQ G LSD
Sbjct: 61  VHTLESGREKPRFRWVEVGSDITEMQKQAISQLPPKMTKRCKAVMKQIICFSPQNGNLSD 120

Query: 121 MLAAWVRIMKPERADWLLVLKHLRILNHPLYIQVAEAALEEITFEANTRDYTKIIHHYGK 180
           MLAAWVRIMKP+RADWL VLKHLRIL+HPLYI+VAEAAL E TFEA+TRDYTKIIH+YGK
Sbjct: 121 MLAAWVRIMKPKRADWLSVLKHLRILDHPLYIEVAEAALVERTFEASTRDYTKIIHYYGK 180

Query: 181 QNQLEDAEKVLLSMXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX 240
           +NQLEDAE++LLSM                                              
Sbjct: 181 RNQLEDAERILLSM---------------------------------------------- 240

Query: 241 XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX 300
                                XXXXXXXXXXXXXXXXXXXXXXXXXX             
Sbjct: 241 -------------------REXXXXXXXXXXXXXXXXXXXXXXXXXXKQTFEELKLLEEP 300

Query: 301 XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXRLN 360
                                                                    RLN
Sbjct: 301 LDRRSYDAMIMAFIRAGMPEEGQSQKAQIAFDNMRRAGLEPSDKCIALVLSAYEKENRLN 345

Query: 361 SALELLIDLEKDNVMVGKEASKILAAWLKRLGVVEEVEIVLREYTEKEVN 404
           +ALELLIDLEK+ +MVGKEAS++LAAWLKRLGVVEEVE+VLREY  KE +
Sbjct: 361 AALELLIDLEKEKLMVGKEASEVLAAWLKRLGVVEEVELVLREYAVKEAS 345

[Close]
BLAST of CsGy3G009570 vs. TAIR10
Match: AT1G01970.1 (Tetratricopeptide repeat (TPR)-like superfamily protein)

HSP 1 Score: 172.9 bits (437), Expect = 3.9e-43
Identity = 86/180 (47.78%), Postives = 122/180 (67.78%), Query Frame = 0 

Query: 10  YQLHLPLVNGTSNTSYSRYWRDSIVLSS--RRRCSQMATATAIVDEIHKLESEREKPRFR 69
           + L  PLV       +  + R+ +++ S   R CS    A+  + E+ + E   +   F 
Sbjct: 12  FGLKCPLVIARHRLYHRMFRRNPLLVESHLNRLCSCKCNASLAIGEVVEKEDAEQSRSFN 71

Query: 70  WVEVGYDITETQKQAISQLPPKMTKRCKAVMKQIICFSPQKGELSDMLAAWVRIMKPERA 129
           W +VG ++TE Q +AI+++P KM+KRC+A+M+QIICFSP+KG   D+L AW+R M P RA
Sbjct: 72  WADVGLNLTEEQDEAITRIPIKMSKRCQALMRQIICFSPEKGSFCDLLGAWLRRMNPIRA 131

Query: 130 DWLLVLKHLRILNHPLYIQVAEAALEEITFEANTRDYTKIIHHYGKQNQLEDAEKVLLSM 188
           DWL +LK L+ L+ P YI+VAE +L + +FEAN RDYTKIIH+YGK NQ+EDAE+ LLSM
Sbjct: 132 DWLSILKELKNLDSPFYIKVAEFSLLQDSFEANARDYTKIIHYYGKLNQVEDAERTLLSM 191

[Close]
BLAST of CsGy3G009570 vs. TAIR10
Match: AT1G19520.1 (pentatricopeptide (PPR) repeat-containing protein)

HSP 1 Score: 92.0 bits (227), Expect = 8.8e-19
Identity = 46/122 (37.70%), Postives = 78/122 (63.93%), Query Frame = 0 

Query: 67  RWVEVGYDITETQKQAISQLPPKMTKRCKAVMKQIICFSPQKG-ELSDMLAAWVRIMKPE 126
           +WVE+   I E +++A  + P  +T +CK VM+++   S Q+G + S +LA W  +++P 
Sbjct: 291 KWVEMADKIHEAEEEADWREPKPVTGKCKLVMEKL--ESLQEGDDPSGLLAEWAELLEPN 350

Query: 127 RADWLLVLKHLRILNHPLYIQVAEAALEEITFEANTRDYTKIIHHYGKQNQLEDAEKVLL 186
           R DW+ ++  LR  N   Y++VAE  L+E +F A+  DY+K+IH + K+N +ED E++L 
Sbjct: 351 RVDWIALINQLREGNTHAYLKVAEGVLDEKSFNASISDYSKLIHIHAKENHIEDVERILK 410

Query: 187 SM 188
            M
Sbjct: 411 KM 410

[Close]
BLAST of CsGy3G009570 vs. Swiss-Prot
Match: sp|Q9LPC4|PPR1_ARATH (Pentatricopeptide repeat-containing protein At1g01970 OS=Arabidopsis thaliana OX=3702 GN=At1g01970 PE=2 SV=1)

HSP 1 Score: 172.9 bits (437), Expect = 7.0e-42
Identity = 86/180 (47.78%), Postives = 122/180 (67.78%), Query Frame = 0 

Query: 10  YQLHLPLVNGTSNTSYSRYWRDSIVLSS--RRRCSQMATATAIVDEIHKLESEREKPRFR 69
           + L  PLV       +  + R+ +++ S   R CS    A+  + E+ + E   +   F 
Sbjct: 12  FGLKCPLVIARHRLYHRMFRRNPLLVESHLNRLCSCKCNASLAIGEVVEKEDAEQSRSFN 71

Query: 70  WVEVGYDITETQKQAISQLPPKMTKRCKAVMKQIICFSPQKGELSDMLAAWVRIMKPERA 129
           W +VG ++TE Q +AI+++P KM+KRC+A+M+QIICFSP+KG   D+L AW+R M P RA
Sbjct: 72  WADVGLNLTEEQDEAITRIPIKMSKRCQALMRQIICFSPEKGSFCDLLGAWLRRMNPIRA 131

Query: 130 DWLLVLKHLRILNHPLYIQVAEAALEEITFEANTRDYTKIIHHYGKQNQLEDAEKVLLSM 188
           DWL +LK L+ L+ P YI+VAE +L + +FEAN RDYTKIIH+YGK NQ+EDAE+ LLSM
Sbjct: 132 DWLSILKELKNLDSPFYIKVAEFSLLQDSFEANARDYTKIIHYYGKLNQVEDAERTLLSM 191

[Close]
BLAST of CsGy3G009570 vs. Swiss-Prot
Match: sp|Q8LEZ4|NFD5_ARATH (Protein NUCLEAR FUSION DEFECTIVE 5, mitochondrial OS=Arabidopsis thaliana OX=3702 GN=NFD5 PE=2 SV=1)

HSP 1 Score: 52.0 bits (123), Expect = 1.8e-05
Identity = 28/82 (34.15%), Postives = 50/82 (60.98%), Query Frame = 0 

Query: 67  RWVEVGYDITETQKQAISQLPPKMTKRCKAVMKQIICFSPQKG-ELSDMLAAWVRIMKPE 126
           +WVE+   I E +++A  + P  +T +CK VM+++   S Q+G + S +LA W  +++P 
Sbjct: 291 KWVEMADKIHEAEEEADWREPKPVTGKCKLVMEKL--ESLQEGDDPSGLLAEWAELLEPN 350

Query: 127 RADWLLVLKHLRILNHPLYIQV 148
           R DW+ ++  LR  N   Y++V
Sbjct: 351 RVDWIALINQLREGNTHAYLKV 370

[Close]
BLAST of CsGy3G009570 vs. TrEMBL
Match: tr|A0A0A0L7L8|A0A0A0L7L8_CUCSA (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_3G126080 PE=4 SV=1)

HSP 1 Score: 409.1 bits (1050), Expect = 1.2e-110
Identity = 404/404 (100.00%), Postives = 404/404 (100.00%), Query Frame = 0 

Query: 1   MQISTSNILYQLHLPLVNGTSNTSYSRYWRDSIVLSSRRRCSQMATATAIVDEIHKLESE 60
           MQISTSNILYQLHLPLVNGTSNTSYSRYWRDSIVLSSRRRCSQMATATAIVDEIHKLESE
Sbjct: 1   MQISTSNILYQLHLPLVNGTSNTSYSRYWRDSIVLSSRRRCSQMATATAIVDEIHKLESE 60

Query: 61  REKPRFRWVEVGYDITETQKQAISQLPPKMTKRCKAVMKQIICFSPQKGELSDMLAAWVR 120
           REKPRFRWVEVGYDITETQKQAISQLPPKMTKRCKAVMKQIICFSPQKGELSDMLAAWVR
Sbjct: 61  REKPRFRWVEVGYDITETQKQAISQLPPKMTKRCKAVMKQIICFSPQKGELSDMLAAWVR 120

Query: 121 IMKPERADWLLVLKHLRILNHPLYIQVAEAALEEITFEANTRDYTKIIHHYGKQNQLEDA 180
           IMKPERADWLLVLKHLRILNHPLYIQVAEAALEEITFEANTRDYTKIIHHYGKQNQLEDA
Sbjct: 121 IMKPERADWLLVLKHLRILNHPLYIQVAEAALEEITFEANTRDYTKIIHHYGKQNQLEDA 180

Query: 181 EKVLLSMXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX 240
           EKVLLSMXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX
Sbjct: 181 EKVLLSMXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX 240

Query: 241 XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX 300
           XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX
Sbjct: 241 XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX 300

Query: 301 XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXRLNSALELLI 360
           XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXRLNSALELLI
Sbjct: 301 XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXRLNSALELLI 360

Query: 361 DLEKDNVMVGKEASKILAAWLKRLGVVEEVEIVLREYTEKEVNR 405
           DLEKDNVMVGKEASKILAAWLKRLGVVEEVEIVLREYTEKEVNR
Sbjct: 361 DLEKDNVMVGKEASKILAAWLKRLGVVEEVEIVLREYTEKEVNR 404

[Close]
BLAST of CsGy3G009570 vs. TrEMBL
Match: tr|A0A1S3AWA7|A0A1S3AWA7_CUCME (pentatricopeptide repeat-containing protein At1g01970 OS=Cucumis melo OX=3656 GN=LOC103483346 PE=4 SV=1)

HSP 1 Score: 384.4 bits (986), Expect = 3.1e-103
Identity = 384/404 (95.05%), Postives = 393/404 (97.28%), Query Frame = 0 

Query: 1   MQISTSNILYQLHLPLVNGTSNTSYSRYWRDSIVLSSRRRCSQMATATAIVDEIHKLESE 60
           M ISTSNILYQLHLPLVNGTSNTS SRYW+DSIVL+SRRRCSQMAT TAIVDE+HKLESE
Sbjct: 1   MHISTSNILYQLHLPLVNGTSNTSSSRYWKDSIVLNSRRRCSQMATVTAIVDELHKLESE 60

Query: 61  REKPRFRWVEVGYDITETQKQAISQLPPKMTKRCKAVMKQIICFSPQKGELSDMLAAWVR 120
           REKPRFRWVEVGY+ITETQKQAISQLPPKMTK+CKAVMKQIICFSPQKGELSDMLAAWVR
Sbjct: 61  REKPRFRWVEVGYNITETQKQAISQLPPKMTKKCKAVMKQIICFSPQKGELSDMLAAWVR 120

Query: 121 IMKPERADWLLVLKHLRILNHPLYIQVAEAALEEITFEANTRDYTKIIHHYGKQNQLEDA 180
           IMKPERADWL VLKHLRILNHPLYIQVAEAAL EITFEANTRDYTKIIHHYGKQNQLEDA
Sbjct: 121 IMKPERADWLSVLKHLRILNHPLYIQVAEAALVEITFEANTRDYTKIIHHYGKQNQLEDA 180

Query: 181 EKVLLSMXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX 240
           EKVLL+M    XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX
Sbjct: 181 EKVLLTMRERGXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX 240

Query: 241 XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX 300
           XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX
Sbjct: 241 XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX 300

Query: 301 XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXRLNSALELLI 360
           XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX RLN+ALELLI
Sbjct: 301 XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXNRLNAALELLI 360

Query: 361 DLEKDNVMVGKEASKILAAWLKRLGVVEEVEIVLREYTEKEVNR 405
           DLEKDNVMVGKEAS+ILAAWLKRLGVVEE+EIVLREYT KEVNR
Sbjct: 361 DLEKDNVMVGKEASQILAAWLKRLGVVEEIEIVLREYTAKEVNR 404

[Close]
BLAST of CsGy3G009570 vs. TrEMBL
Match: tr|W9QSE5|W9QSE5_9ROSA (Uncharacterized protein OS=Morus notabilis OX=981085 GN=L484_022440 PE=4 SV=1)

HSP 1 Score: 197.6 bits (501), Expect = 5.4e-47
Identity = 94/137 (68.61%), Postives = 115/137 (83.94%), Query Frame = 0 

Query: 51  VDEIHKLESEREKPRFRWVEVGYDITETQKQAISQLPPKMTKRCKAVMKQIICFSPQKGE 110
           V+E  K E+   KP+F+WVEVG  ITE+QK+AISQL PKMTKRC+A+MKQ+ICFS  K  
Sbjct: 48  VEETEKAENGGGKPKFKWVEVGPGITESQKEAISQLSPKMTKRCRALMKQLICFSAHKAS 107

Query: 111 LSDMLAAWVRIMKPERADWLLVLKHLRILNHPLYIQVAEAALEEITFEANTRDYTKIIHH 170
           L+++LAAWVRIMKP+RADWL ++K L+I++HPLY QVAE AL E +FEAN RDYTKIIH 
Sbjct: 108 LNELLAAWVRIMKPQRADWLAIIKQLKIMDHPLYFQVAEVALLEESFEANIRDYTKIIHC 167

Query: 171 YGKQNQLEDAEKVLLSM 188
           YGKQN+LEDAEK LL+M
Sbjct: 168 YGKQNRLEDAEKTLLAM 184

[Close]
BLAST of CsGy3G009570 vs. TrEMBL
Match: tr|A0A2I4GRZ8|A0A2I4GRZ8_9ROSI (pentatricopeptide repeat-containing protein At1g01970 OS=Juglans regia OX=51240 GN=LOC109010321 PE=4 SV=1)

HSP 1 Score: 195.3 bits (495), Expect = 2.7e-46
Identity = 104/181 (57.46%), Postives = 132/181 (72.93%), Query Frame = 0 

Query: 15  PLVNGTSNTSYSRYWRDSIVLSSRR-------RCSQMATATAIVDEIHKLESER-EKPRF 74
           PL N +  T YS     + +L + R       RC  +A     V++I K   ++ EKPRF
Sbjct: 19  PLTNDSRKTIYSPL--VNFILKTPRNIGFGKLRCRLIAPD---VEQIEKTVIDQIEKPRF 78

Query: 75  RWVEVGYDITETQKQAISQLPPKMTKRCKAVMKQIICFSPQKGELSDMLAAWVRIMKPER 134
           +WVE+G +I+E QK+AI++LPPKMTKRCKA+M+QIICF+PQKG  SD+L AWV IMKP R
Sbjct: 79  KWVEIGRNISEAQKKAIAELPPKMTKRCKALMRQIICFTPQKGSFSDLLVAWVWIMKPRR 138

Query: 135 ADWLLVLKHLRILNHPLYIQVAEAALEEITFEANTRDYTKIIHHYGKQNQLEDAEKVLLS 188
           ADWL VLK LR ++HPLY++VAE AL E +FEAN RDYTKIIH YGKQNQL+DAE+ L +
Sbjct: 139 ADWLTVLKELRTMDHPLYLKVAELALLEESFEANIRDYTKIIHAYGKQNQLQDAERTLSA 194

[Close]
BLAST of CsGy3G009570 vs. TrEMBL
Match: tr|A0A061DV02|A0A061DV02_THECC (Tetratricopeptide repeat (TPR)-like superfamily protein, putative OS=Theobroma cacao OX=3641 GN=TCM_005495 PE=4 SV=1)

HSP 1 Score: 193.7 bits (491), Expect = 7.8e-46
Identity = 103/198 (52.02%), Postives = 136/198 (68.69%), Query Frame = 0 

Query: 1   MQISTSNILYQLH--LPLVNGTSNTSYSRYW---------RDSIVLSSRRRCSQMATATA 60
           M  S  NI Y  +   P +N T    + + W         +     SS +  +Q   A++
Sbjct: 1   MVTSACNIPYCSYSTYPFINKTKKQIHPQSWGNRNPLLFQKKGAKFSSCKVNNQPEIASS 60

Query: 61  IVDEIHKLESEREKPRFRWVEVGYDITETQKQAISQLPPKMTKRCKAVMKQIICFSPQKG 120
            V+E  K E+  EK R++WVE+G DI E QKQAI++LP KMTKRCKA+MKQIICF P+KG
Sbjct: 61  NVEEKGKPETNEEKRRYKWVEIGPDIAEEQKQAITELPFKMTKRCKALMKQIICFCPEKG 120

Query: 121 ELSDMLAAWVRIMKPERADWLLVLKHLRILNHPLYIQVAEAALEEITFEANTRDYTKIIH 180
            L+D+LAAWV+IMKP RADWL+VLK L+I+ HPLY +VAE AL E +FEAN RD+TKIIH
Sbjct: 121 SLADLLAAWVKIMKPRRADWLVVLKELKIMEHPLYFEVAELALLEESFEANIRDFTKIIH 180

Query: 181 HYGKQNQLEDAEKVLLSM 188
            YGKQ +L++AE +L++M
Sbjct: 181 GYGKQKRLQEAENILVAM 198

The following BLAST results are available for this feature:
BLAST of CsGy3G009570 vs. NCBI nr
Match NameE-valueIdentityDescription
XP_004134345.11.8e-110100.00PREDICTED: pentatricopeptide repeat-containing protein At1g01970 [Cucumis sativu... [more]
XP_008438151.14.7e-10395.05PREDICTED: pentatricopeptide repeat-containing protein At1g01970 [Cucumis melo] ... [more]
XP_023526280.11.2e-7785.85pentatricopeptide repeat-containing protein At1g01970 isoform X1 [Cucurbita pepo... [more]
XP_022980308.12.0e-7785.85pentatricopeptide repeat-containing protein At1g01970 [Cucurbita maxima] >XP_022... [more]
XP_023526282.14.4e-7752.93pentatricopeptide repeat-containing protein At1g01970 isoform X2 [Cucurbita pepo... [more]
BLAST of CsGy3G009570 vs. TAIR10
Match NameE-valueIdentityDescription
AT1G01970.13.9e-4347.78Tetratricopeptide repeat (TPR)-like superfamily protein[more]
AT1G19520.18.8e-1937.70pentatricopeptide (PPR) repeat-containing protein[more]
BLAST of CsGy3G009570 vs. Swiss-Prot
Match NameE-valueIdentityDescription
sp|Q9LPC4|PPR1_ARATH7.0e-4247.78Pentatricopeptide repeat-containing protein At1g01970 OS=Arabidopsis thaliana OX... [more]
sp|Q8LEZ4|NFD5_ARATH1.8e-0534.15Protein NUCLEAR FUSION DEFECTIVE 5, mitochondrial OS=Arabidopsis thaliana OX=370... [more]
BLAST of CsGy3G009570 vs. TrEMBL
Match NameE-valueIdentityDescription
tr|A0A0A0L7L8|A0A0A0L7L8_CUCSA1.2e-110100.00Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_3G126080 PE=4 SV=1[more]
tr|A0A1S3AWA7|A0A1S3AWA7_CUCME3.1e-10395.05pentatricopeptide repeat-containing protein At1g01970 OS=Cucumis melo OX=3656 GN... [more]
tr|W9QSE5|W9QSE5_9ROSA5.4e-4768.61Uncharacterized protein OS=Morus notabilis OX=981085 GN=L484_022440 PE=4 SV=1[more]
tr|A0A2I4GRZ8|A0A2I4GRZ8_9ROSI2.7e-4657.46pentatricopeptide repeat-containing protein At1g01970 OS=Juglans regia OX=51240 ... [more]
tr|A0A061DV02|A0A061DV02_THECC7.8e-4652.02Tetratricopeptide repeat (TPR)-like superfamily protein, putative OS=Theobroma c... [more]
Annotated Terms
The following terms have been associated with this gene:
Vocabulary: Molecular Function
TermDefinition
GO:0005515protein binding
Vocabulary: INTERPRO
TermDefinition
IPR011990TPR-like_helical_dom_sf
IPR002885Pentatricopeptide_repeat
GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
Category Term Accession Term Name
biological_process GO:0008150 biological_process
cellular_component GO:0005575 cellular_component
molecular_function GO:0003674 molecular_function
molecular_function GO:0005515 protein binding
Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
CsGy3G009570.1CsGy3G009570.1mRNA


InterPro
Analysis Name: InterPro Annotations of cucumber Gy14 genome (v2)
Date Performed: 2018-09-25
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR002885Pentatricopeptide repeatPFAMPF13041PPR_2coord: 164..206
e-value: 6.2E-8
score: 32.6
IPR002885Pentatricopeptide repeatPFAMPF01535PPRcoord: 233..261
e-value: 8.7E-6
score: 25.6
coord: 306..332
e-value: 0.033
score: 14.3
coord: 268..291
e-value: 0.56
score: 10.5
IPR002885Pentatricopeptide repeatTIGRFAMTIGR00756TIGR00756coord: 164..195
e-value: 4.3E-7
score: 27.7
coord: 233..263
e-value: 1.2E-4
score: 20.0
IPR002885Pentatricopeptide repeatPROSITEPS51375PPRcoord: 230..264
score: 9.723
IPR002885Pentatricopeptide repeatPROSITEPS51375PPRcoord: 300..334
score: 10.041
IPR002885Pentatricopeptide repeatPROSITEPS51375PPRcoord: 335..369
score: 5.766
IPR002885Pentatricopeptide repeatPROSITEPS51375PPRcoord: 195..229
score: 7.75
IPR002885Pentatricopeptide repeatPROSITEPS51375PPRcoord: 160..194
score: 9.81
IPR002885Pentatricopeptide repeatPROSITEPS51375PPRcoord: 265..299
score: 8.21
IPR011990Tetratricopeptide-like helical domain superfamilyGENE3DG3DSA:1.25.40.10coord: 144..295
e-value: 1.9E-28
score: 101.7
IPR011990Tetratricopeptide-like helical domain superfamilyGENE3DG3DSA:1.25.40.10coord: 296..401
e-value: 6.1E-9
score: 37.4
NoneNo IPR availablePANTHERPTHR24015:SF457SUBFAMILY NOT NAMEDcoord: 26..401
NoneNo IPR availablePANTHERPTHR24015FAMILY NOT NAMEDcoord: 26..401

Synteny
The following gene(s) are orthologous to this gene:
GeneOrthologueOrganismBlock
CsGy3G009570Cla021304Watermelon (97103) v1cgybwmB217
CsGy3G009570Csa3G126080Cucumber (Chinese Long) v2cgybcuB109
CsGy3G009570MELO3C006182Melon (DHL92) v3.5.1cgybmeB200
CsGy3G009570ClCG05G002180Watermelon (Charleston Gray)cgybwcgB203
CsGy3G009570CSPI03G09500Wild cucumber (PI 183967)cgybcpiB110
CsGy3G009570Lsi05G019650Bottle gourd (USVL1VR-Ls)cgyblsiB196
CsGy3G009570MELO3C006182.2Melon (DHL92) v3.6.1cgybmedB201
CsGy3G009570CsaV3_3G009620Cucumber (Chinese Long) v3cgybcucB117
CsGy3G009570Cla97C05G082700Watermelon (97103) v2cgybwmbB196
CsGy3G009570Bhi01G000192Wax gourdcgybwgoB275
CsGy3G009570Carg14830Silver-seed gourdcarcgybB0617
The following gene(s) are paralogous to this gene:

None

The following block(s) are covering this gene:
GeneOrganismBlock
CsGy3G009570Cucumber (Gy14) v2cgybcgybB086
CsGy3G009570Cucumber (Gy14) v2cgybcgybB101
CsGy3G009570Cucurbita maxima (Rimu)cgybcmaB318
CsGy3G009570Cucurbita maxima (Rimu)cgybcmaB330
CsGy3G009570Cucurbita maxima (Rimu)cgybcmaB345
CsGy3G009570Cucurbita maxima (Rimu)cgybcmaB427
CsGy3G009570Cucurbita maxima (Rimu)cgybcmaB459
CsGy3G009570Cucurbita moschata (Rifu)cgybcmoB290
CsGy3G009570Cucurbita moschata (Rifu)cgybcmoB300
CsGy3G009570Cucurbita moschata (Rifu)cgybcmoB317
CsGy3G009570Cucurbita moschata (Rifu)cgybcmoB375
CsGy3G009570Cucurbita moschata (Rifu)cgybcmoB401
CsGy3G009570Cucurbita moschata (Rifu)cgybcmoB426
CsGy3G009570Cucurbita pepo (Zucchini)cgybcpeB304
CsGy3G009570Cucurbita pepo (Zucchini)cgybcpeB357
CsGy3G009570Cucurbita pepo (Zucchini)cgybcpeB406
CsGy3G009570Cucurbita pepo (Zucchini)cgybcpeB454
CsGy3G009570Cucumber (Chinese Long) v2cgybcuB138
CsGy3G009570Bottle gourd (USVL1VR-Ls)cgyblsiB140
CsGy3G009570Melon (DHL92) v3.5.1cgybmeB143
CsGy3G009570Melon (DHL92) v3.5.1cgybmeB152
CsGy3G009570Melon (DHL92) v3.6.1cgybmedB140
CsGy3G009570Melon (DHL92) v3.6.1cgybmedB151
CsGy3G009570Watermelon (Charleston Gray)cgybwcgB226
CsGy3G009570Watermelon (97103) v1cgybwmB244
CsGy3G009570Watermelon (97103) v1cgybwmB259
CsGy3G009570Wild cucumber (PI 183967)cgybcpiB127
CsGy3G009570Wild cucumber (PI 183967)cgybcpiB141
CsGy3G009570Silver-seed gourdcarcgybB0245
CsGy3G009570Silver-seed gourdcarcgybB0495
CsGy3G009570Silver-seed gourdcarcgybB0907
CsGy3G009570Silver-seed gourdcarcgybB0924
CsGy3G009570Cucumber (Chinese Long) v3cgybcucB131
CsGy3G009570Cucumber (Chinese Long) v3cgybcucB142
CsGy3G009570Watermelon (97103) v2cgybwmbB167
CsGy3G009570Watermelon (97103) v2cgybwmbB218
CsGy3G009570Wax gourdcgybwgoB243
CsGy3G009570Wax gourdcgybwgoB247