CsGy3G007960 (gene) Cucumber (Gy14) v2

Overview
NameCsGy3G007960
Typegene
OrganismCucumis sativus (Cucumber (Gy14) v2)
Descriptionpyridoxine/pyridoxamine 5'-phosphate oxidase 2
LocationChr3 : 6726845 .. 6729314 (-)
Genome Viewer
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: five_prime_UTRexonCDSthree_prime_UTR
Hold the cursor over a type above to highlight its positions in the sequence below.
ATCTCTTCCTTCCCTTCCATGTCACCTTTATTTTCTCCATCCATCCACACATTATTCTTCTCACAAACATAAATGAAACGTGCAAGTTTGAAATGTACGAGACATGGACGAGATGCGGGTGAAATAAAACATCCGACCTAATAAACTTACTAAACATGCACAAAATCACTTAGAAGGGGTATCAACTTGATTGTGAAACTCCGGCCTAATAAATTTTATGATCAAATTGCTACTCCTCTTAAGTCATTTAGAGTGATTTTGTGCATGTTTAATAAGTTTATTAGACCGAATGTTTTATTTCATACGCATATTGCACGTTTCAAACTTGCACTATTAGTTTCAAAATCAGAAAAAGAGATAGAGACATGATAGAGAATGATGAAAAAAATAAAGAATAGAGTAGAAGAGGAATGTGTTGATGGAGGGAGAAAATAAAGGTGAGAGAGGAAATAGTAGGGAAGATAAAGGAAAAATTAAATTCATCCTTAAAAAATCATATTTTTCGAAACCAATCATAAAAATCTTTTATCCCTCAATTTTTAACCTATTTTTTACGATTTCCCTAAATTATTCGCTCCATATTGGATATAAAGACCGATACCGTTGAATTTGGCTCCAGAATGCTCTATTTCAAACCTGTAGGAAATGGGATCGGCAGTGGCGCCATGGAAGTCCCTTCTTCTTAGTGCTTTGGAATCAAATGGCCATTTCAAGCATTCCAAATTCTTGCAGCTGGTACATTTCCCTCTCTATTTCTCTCAAGTTCAAGTTTCCTTTTATATATCTTCTTCACGGTCGATTTCTATGTCGAATTTGTTTTCAGGCAACGATAGGAACTAATGGAAGGCCCTCAAATCGAACAGTCGTTTTCAGAGGATTTGAAGAAGGCACCGACAGGATCCATATTTACACAGATTCTCGAAATCGCAAGGTTTCATTTAAATTCTTTTATTTAGGGGGAAGCTCTATATTTCGTCTTAGATCGTTCAATTCATGAGGCCATTGCTGTTTTTCTATGTATTTTGATGTAATGGTTATATGGGTTTCTTGATTTTGAGGGCTGTGTTGTGTTGGTGTTTTCAATTACGTAATTCATGTGTCTGGGAACAAGACAAGCGATAAAATAAGCTCAGGGGAATTGTTTGTGATGGATTAGGTCAGAATTTTTTATATTAAGCATCTGGGTTTTGTACTGCAAATGAAATTCACTTTTGGTTGATTCTGCAGATTGAAGAGCTTAAGAATTGTCCATTTGCTGAGGTAACTATTCTCGCCTCCCCCTGGCTCTTAACACAGTTTTTTCATGCCAGTTTTTGTACCTTATAATCTTTAGATTACTACTGAAATATGCTCCAATTCGAGTCAAATTTTCGATTTTGTATGCTTTGTTCTGTAAGATTTGTTGGTATTTCACCGAATCATGGGAGCAATTTCGTATCAGTGGGAGAATGGAGGTTGTCGATGCATCATGTGTTGATGCTACAAAGTTTAAGGTTGTGGCCATGGCCCTTTCTTCTTATGACTTAAAGCTTGTTCTAAATTTTCAACAGTTCACTTACTCAATTGGTTATGGTCTTATATATCTTATTATGGTCATTTGGATTCTGAATGCAGCAAAGAGCAGAAGCCTGGTCCTCCATTTCTCCAAAGTCAAGAATGCAGTATTTGGGGCCTAGTCCAGGTCTTCCTCACCTTGCTGAACAACCAGCCAAGGAACCTTTTCTAGATTCTTGTTCAGGTCCTGTTGATACATTTTGTTTGCTGGTCTTCGATCCTGATAAGGTTTGTAATGGTTTCTTTCTAGATTAGCACACAATTCTTGCATTTCCATCTTGTTATTTTCCTTTATGATACCTTTTATCCTTTTTCGTTCGCAGGTTGATTATCTGAATGTGAGGAGTGATGAAAGGAATTCGTTTAGAGCTATTACAAGTTTTGGAGGGGAGAAATTATGGGAAACGGAGAGGATAAATCTCTAACAGTCACACCCGGATCTGCACATATACATCTTGATAAGAAGCTGCTATCTTCAAATCAACTGATGCAAGTTGAAGTTGCTCACGTGTTCACAAAAATCCAAATCCTTTAGTTTGTTTTTTTTAAATGGAGACAAACTTCTTTATTAATAATAGAAACTCAAAGGACAAGAGAGATACAATGAGCGAACTCCTTCTGTTTGTTAGTACTGATGTTATTGATCAGTAACAGTTTCTTGTGCGACACATTGTTATTTTTGAACACGTTCATTAATCATTCCCAATGAAATTTGGTAGCTTTATTCATTTGAACTCGGATAGAGATGTGGCTGAGCAGCAGCAACAACAATAAAAAAGTGTCCAAACTCAAAAGGAGTATCCATTTCAACAAAGCAGATAGCAATTGGACTTGAAAGTAATTTTTCTCTTGGTGTGAGCTTTTTAGATTGGAGCATGTTCTTGAAACGATTCTTAAAAAGTTTTTGAAGACTTCG

mRNA sequence

ATCTCTTCCTTCCCTTCCATGTCACCTTTATTTTCTCCATCCATCCACACATTATTCTTCTCACAAACATAAATGAAACGTGCAAGTTTGAAATGTACGAGACATGGACGAGATGCGGGTGAAATAAAACATCCGACCTAATAAACTTACTAAACATGCACAAAATCACTTAGAAGGGGTATCAACTTGATTGTGAAACTCCGGCCTAATAAATTTTATGATCAAATTGCTACTCCTCTTAAGTCATTTAGAGTGATTTTGTGCATGTTTAATAAGTTTATTAGACCGAATGTTTTATTTCATACGCATATTGCACGTTTCAAACTTGCACTATTAGTTTCAAAATCAGAAAAAGAGATAGAGACATGATAGAGAATGATGAAAAAAATAAAGAATAGAGTAGAAGAGGAATGTGTTGATGGAGGGAGAAAATAAAGGTGAGAGAGGAAATAGTAGGGAAGATAAAGGAAAAATTAAATTCATCCTTAAAAAATCATATTTTTCGAAACCAATCATAAAAATCTTTTATCCCTCAATTTTTAACCTATTTTTTACGATTTCCCTAAATTATTCGCTCCATATTGGATATAAAGACCGATACCGTTGAATTTGGCTCCAGAATGCTCTATTTCAAACCTGTAGGAAATGGGATCGGCAGTGGCGCCATGGAAGTCCCTTCTTCTTAGTGCTTTGGAATCAAATGGCCATTTCAAGCATTCCAAATTCTTGCAGCTGGCAACGATAGGAACTAATGGAAGGCCCTCAAATCGAACAGTCGTTTTCAGAGGATTTGAAGAAGGCACCGACAGGATCCATATTTACACAGATTCTCGAAATCGCAAGATTGAAGAGCTTAAGAATTGTCCATTTGCTGAGATTTGTTGGTATTTCACCGAATCATGGGAGCAATTTCGTATCAGTGGGAGAATGGAGGTTGTCGATGCATCATGTGTTGATGCTACAAAGTTTAAGCAAAGAGCAGAAGCCTGGTCCTCCATTTCTCCAAAGTCAAGAATGCAGTATTTGGGGCCTAGTCCAGGTCTTCCTCACCTTGCTGAACAACCAGCCAAGGAACCTTTTCTAGATTCTTGTTCAGGTCCTGTTGATACATTTTGTTTGCTGGTCTTCGATCCTGATAAGGTTGATTATCTGAATGTGAGGAGTGATGAAAGGAATTCGTTTAGAGCTATTACAAGTTTTGGAGGGGAGAAATTATGGGAAACGGAGAGGATAAATCTCTAACAGTCACACCCGGATCTGCACATATACATCTTGATAAGAAGCTGCTATCTTCAAATCAACTGATGCAAGTTGAAGTTGCTCACGTGTTCACAAAAATCCAAATCCTTTAGTTTGTTTTTTTTAAATGGAGACAAACTTCTTTATTAATAATAGAAACTCAAAGGACAAGAGAGATACAATGAGCGAACTCCTTCTGTTTGTTAGTACTGATGTTATTGATCAGTAACAGTTTCTTGTGCGACACATTGTTATTTTTGAACACGTTCATTAATCATTCCCAATGAAATTTGGTAGCTTTATTCATTTGAACTCGGATAGAGATGTGGCTGAGCAGCAGCAACAACAATAAAAAAGTGTCCAAACTCAAAAGGAGTATCCATTTCAACAAAGCAGATAGCAATTGGACTTGAAAGTAATTTTTCTCTTGGTGTGAGCTTTTTAGATTGGAGCATGTTCTTGAAACGATTCTTAAAAAGTTTTTGAAGACTTCG

Coding sequence (CDS)

ATGGGATCGGCAGTGGCGCCATGGAAGTCCCTTCTTCTTAGTGCTTTGGAATCAAATGGCCATTTCAAGCATTCCAAATTCTTGCAGCTGGCAACGATAGGAACTAATGGAAGGCCCTCAAATCGAACAGTCGTTTTCAGAGGATTTGAAGAAGGCACCGACAGGATCCATATTTACACAGATTCTCGAAATCGCAAGATTGAAGAGCTTAAGAATTGTCCATTTGCTGAGATTTGTTGGTATTTCACCGAATCATGGGAGCAATTTCGTATCAGTGGGAGAATGGAGGTTGTCGATGCATCATGTGTTGATGCTACAAAGTTTAAGCAAAGAGCAGAAGCCTGGTCCTCCATTTCTCCAAAGTCAAGAATGCAGTATTTGGGGCCTAGTCCAGGTCTTCCTCACCTTGCTGAACAACCAGCCAAGGAACCTTTTCTAGATTCTTGTTCAGGTCCTGTTGATACATTTTGTTTGCTGGTCTTCGATCCTGATAAGGTTGATTATCTGAATGTGAGGAGTGATGAAAGGAATTCGTTTAGAGCTATTACAAGTTTTGGAGGGGAGAAATTATGGGAAACGGAGAGGATAAATCTCTAA

Protein sequence

MGSAVAPWKSLLLSALESNGHFKHSKFLQLATIGTNGRPSNRTVVFRGFEEGTDRIHIYTDSRNRKIEELKNCPFAEICWYFTESWEQFRISGRMEVVDASCVDATKFKQRAEAWSSISPKSRMQYLGPSPGLPHLAEQPAKEPFLDSCSGPVDTFCLLVFDPDKVDYLNVRSDERNSFRAITSFGGEKLWETERINL
Homology
[Close]
BLAST of CsGy3G007960 vs. NCBI nr
Match: XP_004133803.1 (PREDICTED: pyridoxine/pyridoxamine 5'-phosphate oxidase 2 [Cucumis sativus] >KGN56412.1 hypothetical protein Csa_3G119450 [Cucumis sativus])

HSP 1 Score: 413.7 bits (1062), Expect = 3.6e-112
Identity = 196/198 (98.99%), Postives = 198/198 (100.00%), Query Frame = 0 

Query: 1   MGSAVAPWKSLLLSALESNGHFKHSKFLQLATIGTNGRPSNRTVVFRGFEEGTDRIHIYT 60
           MGSAVAPWKSLLLSALESNGHFKHSKFLQLATIGTNGRPSNRTVVFRGFEEGTDRIHIYT
Sbjct: 1   MGSAVAPWKSLLLSALESNGHFKHSKFLQLATIGTNGRPSNRTVVFRGFEEGTDRIHIYT 60

Query: 61  DSRNRKIEELKNCPFAEICWYFTESWEQFRISGRMEVVDASCVDATKFKQRAEAWSSISP 120
           DSRNRKIEELKNCPFAEICWYFTESWEQFRISGRMEVVDASCVDATKFKQRAEAWSSISP
Sbjct: 61  DSRNRKIEELKNCPFAEICWYFTESWEQFRISGRMEVVDASCVDATKFKQRAEAWSSISP 120

Query: 121 KSRMQYLGPSPGLPHLAEQPAKEPFLDSCSGPVDTFCLLVFDPDKVDYLNVRSDERNSFR 180
           KSRMQYLGPSPGLPHLAEQPAKEPFLDSCSGPVDTFCLLVFDPD+VDYLNVRSDERNSF+
Sbjct: 121 KSRMQYLGPSPGLPHLAEQPAKEPFLDSCSGPVDTFCLLVFDPDQVDYLNVRSDERNSFK 180

Query: 181 AITSFGGEKLWETERINL 199
           AITSFGGEKLWETERINL
Sbjct: 181 AITSFGGEKLWETERINL 198

[Close]
BLAST of CsGy3G007960 vs. NCBI nr
Match: XP_008437871.1 (PREDICTED: pyridoxine/pyridoxamine 5'-phosphate oxidase 2 [Cucumis melo] >XP_016898998.1 PREDICTED: pyridoxine/pyridoxamine 5'-phosphate oxidase 2 [Cucumis melo])

HSP 1 Score: 382.5 bits (981), Expect = 8.8e-103
Identity = 180/197 (91.37%), Postives = 189/197 (95.94%), Query Frame = 0 

Query: 1   MGSAVAPWKSLLLSALESNGHFKHSKFLQLATIGTNGRPSNRTVVFRGFEEGTDRIHIYT 60
           MGSAVAPWKSLLL ALESNG  KHSKFLQLATIGTNGRPSNRTVVFR FEEGTDRIHIYT
Sbjct: 1   MGSAVAPWKSLLLRALESNGQIKHSKFLQLATIGTNGRPSNRTVVFREFEEGTDRIHIYT 60

Query: 61  DSRNRKIEELKNCPFAEICWYFTESWEQFRISGRMEVVDASCVDATKFKQRAEAWSSISP 120
           DSR+RKIEELKNCPFAE+CWYFT++WEQFRISGRMEVVDASC+DATKFKQRAEAWSSISP
Sbjct: 61  DSRSRKIEELKNCPFAEVCWYFTDTWEQFRISGRMEVVDASCLDATKFKQRAEAWSSISP 120

Query: 121 KSRMQYLGPSPGLPHLAEQPAKEPFLDSCSGPVDTFCLLVFDPDKVDYLNVRSDERNSFR 180
           KSRMQYLGPSPGLPHLAEQPAKEPFLDS SGPVD FCLLVFDPD+VDYLN++S+ERN FR
Sbjct: 121 KSRMQYLGPSPGLPHLAEQPAKEPFLDSYSGPVDAFCLLVFDPDQVDYLNLKSEERNLFR 180

Query: 181 AITSFGGEKLWETERIN 198
           AI SFGGEKLWETERIN
Sbjct: 181 AIPSFGGEKLWETERIN 197

[Close]
BLAST of CsGy3G007960 vs. NCBI nr
Match: XP_022924710.1 (pyridoxine/pyridoxamine 5'-phosphate oxidase 2 isoform X1 [Cucurbita moschata])

HSP 1 Score: 348.2 bits (892), Expect = 1.8e-92
Identity = 165/197 (83.76%), Postives = 176/197 (89.34%), Query Frame = 0 

Query: 1   MGSAVAPWKSLLLSALESNGHFKHSKFLQLATIGTNGRPSNRTVVFRGFEEGTDRIHIYT 60
           MGSA APWKSLLLSALESN   KHS FL LATIG NGRPSNRTVVFRGFEEGTDRIHIYT
Sbjct: 24  MGSAAAPWKSLLLSALESNAQIKHSTFLHLATIGANGRPSNRTVVFRGFEEGTDRIHIYT 83

Query: 61  DSRNRKIEELKNCPFAEICWYFTESWEQFRISGRMEVVDASCVDATKFKQRAEAWSSISP 120
           DSR+RKIEELK CPFAEI WYFTESWEQFRISGR+EVVDASC+DATKFK+RAEAWSSISP
Sbjct: 84  DSRSRKIEELKTCPFAEISWYFTESWEQFRISGRIEVVDASCLDATKFKKRAEAWSSISP 143

Query: 121 KSRMQYLGPSPGLPHLAEQPAKEPFLDSCSGPVDTFCLLVFDPDKVDYLNVRSDERNSFR 180
           KSRMQYLGPSP LP++AEQPAKEP LDSCSGPVD FCLLV DPD+VDYLN++S ER  F+
Sbjct: 144 KSRMQYLGPSPNLPYIAEQPAKEPVLDSCSGPVDAFCLLVLDPDQVDYLNLKSAERKLFK 203

Query: 181 AITSFGGEKLWETERIN 198
           AI   G E LWE+ERIN
Sbjct: 204 AIPCVGRETLWESERIN 220

[Close]
BLAST of CsGy3G007960 vs. NCBI nr
Match: XP_023527386.1 (pyridoxine/pyridoxamine 5'-phosphate oxidase 2 isoform X1 [Cucurbita pepo subsp. pepo] >XP_023527387.1 pyridoxine/pyridoxamine 5'-phosphate oxidase 2 isoform X1 [Cucurbita pepo subsp. pepo])

HSP 1 Score: 341.3 bits (874), Expect = 2.2e-90
Identity = 162/197 (82.23%), Postives = 175/197 (88.83%), Query Frame = 0 

Query: 1   MGSAVAPWKSLLLSALESNGHFKHSKFLQLATIGTNGRPSNRTVVFRGFEEGTDRIHIYT 60
           MGSA APWKSLLLSALESN   KHS+FL LATIG NGRPSNRTVVFRGFEEGTD IHIYT
Sbjct: 1   MGSAAAPWKSLLLSALESNAQIKHSRFLHLATIGGNGRPSNRTVVFRGFEEGTDGIHIYT 60

Query: 61  DSRNRKIEELKNCPFAEICWYFTESWEQFRISGRMEVVDASCVDATKFKQRAEAWSSISP 120
           DSR+RKIEELK CPFAEI WYFTESWEQFRISGR+EVVDASC+DATKFK+RAEAWSSIS 
Sbjct: 61  DSRSRKIEELKACPFAEISWYFTESWEQFRISGRIEVVDASCLDATKFKKRAEAWSSISL 120

Query: 121 KSRMQYLGPSPGLPHLAEQPAKEPFLDSCSGPVDTFCLLVFDPDKVDYLNVRSDERNSFR 180
           KSRMQYLGPSP LP++AEQPAKEP LD CSGPVD FCLLV DPD+VDYLN++S+ER  F+
Sbjct: 121 KSRMQYLGPSPNLPYIAEQPAKEPVLDPCSGPVDAFCLLVLDPDQVDYLNLKSEERKLFK 180

Query: 181 AITSFGGEKLWETERIN 198
           AI   G E LWE+ERIN
Sbjct: 181 AIPCLGRETLWESERIN 197

[Close]
BLAST of CsGy3G007960 vs. NCBI nr
Match: XP_022980848.1 (pyridoxine/pyridoxamine 5'-phosphate oxidase 2 isoform X1 [Cucurbita maxima])

HSP 1 Score: 340.9 bits (873), Expect = 2.9e-90
Identity = 162/197 (82.23%), Postives = 174/197 (88.32%), Query Frame = 0 

Query: 1   MGSAVAPWKSLLLSALESNGHFKHSKFLQLATIGTNGRPSNRTVVFRGFEEGTDRIHIYT 60
           MGSA APWKSLLLSALESN    HS+FL LATIG NGRPSNRTVVFRGFEEGTD I IYT
Sbjct: 1   MGSAAAPWKSLLLSALESNAQITHSRFLHLATIGGNGRPSNRTVVFRGFEEGTDGIRIYT 60

Query: 61  DSRNRKIEELKNCPFAEICWYFTESWEQFRISGRMEVVDASCVDATKFKQRAEAWSSISP 120
           DSR+RKIEELK CPFAEI WYFTESWEQFRISGR+EVVDASC+DATKFK+RAEAWSSISP
Sbjct: 61  DSRSRKIEELKTCPFAEISWYFTESWEQFRISGRIEVVDASCLDATKFKKRAEAWSSISP 120

Query: 121 KSRMQYLGPSPGLPHLAEQPAKEPFLDSCSGPVDTFCLLVFDPDKVDYLNVRSDERNSFR 180
           KSRMQYLGPSP LP++AEQPAKEP LDSCSGPVD FCLLV DPD+VDYLN++S ER  F+
Sbjct: 121 KSRMQYLGPSPNLPYIAEQPAKEPVLDSCSGPVDAFCLLVLDPDQVDYLNLKSAERKLFK 180

Query: 181 AITSFGGEKLWETERIN 198
           AI   G E LWE+ERIN
Sbjct: 181 AIPCLGRETLWESERIN 197

[Close]
BLAST of CsGy3G007960 vs. TAIR10
Match: AT2G46580.1 (Pyridoxamine 5'-phosphate oxidase family protein)

HSP 1 Score: 251.9 bits (642), Expect = 3.2e-67
Identity = 113/197 (57.36%), Postives = 155/197 (78.68%), Query Frame = 0 

Query: 1   MGSAVAPWKSLLLSALESNGHFKHSKFLQLATIGTNGRPSNRTVVFRGFEEGTDRIHIYT 60
           MG+ VAPWK LL  A+E+N H  HS ++QLATIG NGRPSNRTVVFRGFEE +DRI I T
Sbjct: 1   MGTHVAPWKQLLFGAIEANSHLSHSSYVQLATIGLNGRPSNRTVVFRGFEENSDRIQINT 60

Query: 61  DSRNRKIEELKNCPFAEICWYFTESWEQFRISGRMEVVDASCVDATKFKQRAEAWSSISP 120
           D R+RKIEELK+CPF+E+CWYF+++WEQFRI+GR+EV+DAS  D TK +QR +AW + S 
Sbjct: 61  DLRSRKIEELKHCPFSEMCWYFSDTWEQFRINGRIEVIDASNPDQTKLQQREKAWFANSL 120

Query: 121 KSRMQYLGPSPGLPHLAEQPAKEPFLDSCSGPVDTFCLLVFDPDKVDYLNVRSDERNSFR 180
           +SR+ Y+ P+PG P  +EQ +++  LD  SGPV  +CLL+ +P+KVDYLN+++++R  F 
Sbjct: 121 RSRLIYVCPTPGSPCNSEQSSQQVKLDPSSGPVPEYCLLLLEPEKVDYLNLKTNQRLFFS 180

Query: 181 AITSFGGEKLWETERIN 198
           ++ +  GEK W +E++N
Sbjct: 181 SMATGTGEKCWTSEKVN 197

[Close]
BLAST of CsGy3G007960 vs. Swiss-Prot
Match: sp|Q9ZPY1|PPOX2_ARATH (Pyridoxine/pyridoxamine 5'-phosphate oxidase 2 OS=Arabidopsis thaliana OX=3702 GN=PPOX2 PE=1 SV=2)

HSP 1 Score: 251.9 bits (642), Expect = 5.8e-66
Identity = 113/197 (57.36%), Postives = 155/197 (78.68%), Query Frame = 0 

Query: 1   MGSAVAPWKSLLLSALESNGHFKHSKFLQLATIGTNGRPSNRTVVFRGFEEGTDRIHIYT 60
           MG+ VAPWK LL  A+E+N H  HS ++QLATIG NGRPSNRTVVFRGFEE +DRI I T
Sbjct: 1   MGTHVAPWKQLLFGAIEANSHLSHSSYVQLATIGLNGRPSNRTVVFRGFEENSDRIQINT 60

Query: 61  DSRNRKIEELKNCPFAEICWYFTESWEQFRISGRMEVVDASCVDATKFKQRAEAWSSISP 120
           D R+RKIEELK+CPF+E+CWYF+++WEQFRI+GR+EV+DAS  D TK +QR +AW + S 
Sbjct: 61  DLRSRKIEELKHCPFSEMCWYFSDTWEQFRINGRIEVIDASNPDQTKLQQREKAWFANSL 120

Query: 121 KSRMQYLGPSPGLPHLAEQPAKEPFLDSCSGPVDTFCLLVFDPDKVDYLNVRSDERNSFR 180
           +SR+ Y+ P+PG P  +EQ +++  LD  SGPV  +CLL+ +P+KVDYLN+++++R  F 
Sbjct: 121 RSRLIYVCPTPGSPCNSEQSSQQVKLDPSSGPVPEYCLLLLEPEKVDYLNLKTNQRLFFS 180

Query: 181 AITSFGGEKLWETERIN 198
           ++ +  GEK W +E++N
Sbjct: 181 SMATGTGEKCWTSEKVN 197

[Close]
BLAST of CsGy3G007960 vs. Swiss-Prot
Match: sp|P21159|PDXH_MYXXA (Pyridoxine/pyridoxamine 5'-phosphate oxidase OS=Myxococcus xanthus OX=34 GN=pdxH PE=1 SV=2)

HSP 1 Score: 57.0 bits (136), Expect = 2.8e-07
Identity = 34/94 (36.17%), Postives = 53/94 (56.38%), Query Frame = 0 

Query: 30  LATIGTNGRPSNRTVVFRGFEEGTDRIHIYTDSRNRKIEELKNCPFAEICWYFTESWEQF 89
           +AT+G +GRPS R V+ + F+        YT+  +RK  E +  P+A +C+Y+    EQ 
Sbjct: 57  VATVGDDGRPSARVVLLKDFD--ARGFVFYTNHESRKGREARAHPYAALCFYWQPLNEQV 116

Query: 90  RISGRMEVVDASCVDATKFKQRAE-----AWSSI 119
           R+ GR+E V  +  DA  F+ RA      AW+S+
Sbjct: 117 RVEGRVERVTDAEADA-YFQSRARGSQVGAWASL 147

[Close]
BLAST of CsGy3G007960 vs. Swiss-Prot
Match: sp|Q1DCS1|PDXH_MYXXD (Pyridoxine/pyridoxamine 5'-phosphate oxidase OS=Myxococcus xanthus (strain DK 1622) OX=246197 GN=pdxH PE=3 SV=2)

HSP 1 Score: 57.0 bits (136), Expect = 2.8e-07
Identity = 34/94 (36.17%), Postives = 53/94 (56.38%), Query Frame = 0 

Query: 30  LATIGTNGRPSNRTVVFRGFEEGTDRIHIYTDSRNRKIEELKNCPFAEICWYFTESWEQF 89
           +AT+G +GRPS R V+ + F+        YT+  +RK  E +  P+A +C+Y+    EQ 
Sbjct: 43  VATVGDDGRPSARVVLLKDFD--ARGFVFYTNHESRKGREARAHPYAALCFYWQPLNEQV 102

Query: 90  RISGRMEVVDASCVDATKFKQRAE-----AWSSI 119
           R+ GR+E V  +  DA  F+ RA      AW+S+
Sbjct: 103 RVEGRVERVTDAEADA-YFQSRARGSQVGAWASL 133

[Close]
BLAST of CsGy3G007960 vs. Swiss-Prot
Match: sp|P53210|YG1B_YEAST (Uncharacterized protein YGR017W OS=Saccharomyces cerevisiae (strain ATCC 204508 / S288c) OX=559292 GN=YGR017W PE=1 SV=1)

HSP 1 Score: 57.0 bits (136), Expect = 2.8e-07
Identity = 39/112 (34.82%), Postives = 56/112 (50.00%), Query Frame = 0 

Query: 1   MGSAVAPWKSLLLSALESNGHFKHSKFLQLATIG-TNGRPSNRTVVFRGF---EEGTDRI 60
           M   +APW  + + + ++N     S   Q AT+     +P  RTVVFR F   ++ T+ +
Sbjct: 1   MSHQMAPWIPMFIQSCKNNTEPFVS--FQFATVDELTNKPRCRTVVFRDFLFHDKRTNVL 60

Query: 61  HIYTDSRNRKIEE------------LKNC--PFAEICWYFTESWEQFRISGR 95
              TD R+ KI E             K C  PF E C+YF E+WEQ+R SG+
Sbjct: 61  TFNTDMRSSKITESFITPNSNNSSDSKRCETPFFEACFYFPETWEQYRFSGQ 110

[Close]
BLAST of CsGy3G007960 vs. Swiss-Prot
Match: sp|Q7P203|PDXH_CHRVO (Pyridoxine/pyridoxamine 5'-phosphate oxidase OS=Chromobacterium violaceum (strain ATCC 12472 / DSM 30191 / JCM 1249 / NBRC 12614 / NCIMB 9131 / NCTC 9757) OX=243365 GN=pdxH PE=3 SV=1)

HSP 1 Score: 54.3 bits (129), Expect = 1.8e-06
Identity = 31/94 (32.98%), Postives = 52/94 (55.32%), Query Frame = 0 

Query: 28  LQLATIGTNGRPSNRTVVFRGFEEGTDRIHIYTDSRNRKIEELKNCPFAEICWYFTESWE 87
           + LA IG +GRPS+R V+ +G E+G  ++  YT+ ++RK + L+  P+  + +++ E   
Sbjct: 48  MNLAAIGADGRPSSRIVLLKGVEDG--QLLFYTNYQSRKGQALEANPYVALNFFWPELER 107

Query: 88  QFRISGRMEVVDASCVDA----TKFKQRAEAWSS 118
           Q RI G+   V     DA      +  R  AW+S
Sbjct: 108 QVRIEGKAARVAPEVSDAYFASRPYTSRLGAWAS 139

[Close]
BLAST of CsGy3G007960 vs. TrEMBL
Match: tr|A0A0A0L745|A0A0A0L745_CUCSA (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_3G119450 PE=4 SV=1)

HSP 1 Score: 413.7 bits (1062), Expect = 2.3e-112
Identity = 196/198 (98.99%), Postives = 198/198 (100.00%), Query Frame = 0 

Query: 1   MGSAVAPWKSLLLSALESNGHFKHSKFLQLATIGTNGRPSNRTVVFRGFEEGTDRIHIYT 60
           MGSAVAPWKSLLLSALESNGHFKHSKFLQLATIGTNGRPSNRTVVFRGFEEGTDRIHIYT
Sbjct: 1   MGSAVAPWKSLLLSALESNGHFKHSKFLQLATIGTNGRPSNRTVVFRGFEEGTDRIHIYT 60

Query: 61  DSRNRKIEELKNCPFAEICWYFTESWEQFRISGRMEVVDASCVDATKFKQRAEAWSSISP 120
           DSRNRKIEELKNCPFAEICWYFTESWEQFRISGRMEVVDASCVDATKFKQRAEAWSSISP
Sbjct: 61  DSRNRKIEELKNCPFAEICWYFTESWEQFRISGRMEVVDASCVDATKFKQRAEAWSSISP 120

Query: 121 KSRMQYLGPSPGLPHLAEQPAKEPFLDSCSGPVDTFCLLVFDPDKVDYLNVRSDERNSFR 180
           KSRMQYLGPSPGLPHLAEQPAKEPFLDSCSGPVDTFCLLVFDPD+VDYLNVRSDERNSF+
Sbjct: 121 KSRMQYLGPSPGLPHLAEQPAKEPFLDSCSGPVDTFCLLVFDPDQVDYLNVRSDERNSFK 180

Query: 181 AITSFGGEKLWETERINL 199
           AITSFGGEKLWETERINL
Sbjct: 181 AITSFGGEKLWETERINL 198

[Close]
BLAST of CsGy3G007960 vs. TrEMBL
Match: tr|A0A1S4DSQ7|A0A1S4DSQ7_CUCME (pyridoxine/pyridoxamine 5'-phosphate oxidase 2 OS=Cucumis melo OX=3656 GN=LOC103483173 PE=4 SV=1)

HSP 1 Score: 382.5 bits (981), Expect = 5.8e-103
Identity = 180/197 (91.37%), Postives = 189/197 (95.94%), Query Frame = 0 

Query: 1   MGSAVAPWKSLLLSALESNGHFKHSKFLQLATIGTNGRPSNRTVVFRGFEEGTDRIHIYT 60
           MGSAVAPWKSLLL ALESNG  KHSKFLQLATIGTNGRPSNRTVVFR FEEGTDRIHIYT
Sbjct: 1   MGSAVAPWKSLLLRALESNGQIKHSKFLQLATIGTNGRPSNRTVVFREFEEGTDRIHIYT 60

Query: 61  DSRNRKIEELKNCPFAEICWYFTESWEQFRISGRMEVVDASCVDATKFKQRAEAWSSISP 120
           DSR+RKIEELKNCPFAE+CWYFT++WEQFRISGRMEVVDASC+DATKFKQRAEAWSSISP
Sbjct: 61  DSRSRKIEELKNCPFAEVCWYFTDTWEQFRISGRMEVVDASCLDATKFKQRAEAWSSISP 120

Query: 121 KSRMQYLGPSPGLPHLAEQPAKEPFLDSCSGPVDTFCLLVFDPDKVDYLNVRSDERNSFR 180
           KSRMQYLGPSPGLPHLAEQPAKEPFLDS SGPVD FCLLVFDPD+VDYLN++S+ERN FR
Sbjct: 121 KSRMQYLGPSPGLPHLAEQPAKEPFLDSYSGPVDAFCLLVFDPDQVDYLNLKSEERNLFR 180

Query: 181 AITSFGGEKLWETERIN 198
           AI SFGGEKLWETERIN
Sbjct: 181 AIPSFGGEKLWETERIN 197

[Close]
BLAST of CsGy3G007960 vs. TrEMBL
Match: tr|W9RLI8|W9RLI8_9ROSA (Uncharacterized protein OS=Morus notabilis OX=981085 GN=L484_023479 PE=4 SV=1)

HSP 1 Score: 270.4 bits (690), Expect = 3.2e-69
Identity = 123/197 (62.44%), Postives = 154/197 (78.17%), Query Frame = 0 

Query: 1   MGSAVAPWKSLLLSALESNGHFKHSKFLQLATIGTNGRPSNRTVVFRGFEEGTDRIHIYT 60
           M +  APWK LLL A+E+N H KHS F QLAT+G NGRP+NRTVVFRGF+E TD+I I T
Sbjct: 1   METVKAPWKQLLLDAVEANAHLKHSSFFQLATVGCNGRPANRTVVFRGFQEDTDKIQINT 60

Query: 61  DSRNRKIEELKNCPFAEICWYFTESWEQFRISGRMEVVDASCVDATKFKQRAEAWSSISP 120
           D R+RK+EELK  PFAEICWYFTESWEQFRI+  ++++D +  D  K +QR +AW + S 
Sbjct: 61  DFRSRKVEELKRSPFAEICWYFTESWEQFRINATVDIIDGTIHDPLKLQQREKAWFASSQ 120

Query: 121 KSRMQYLGPSPGLPHLAEQPAKEPFLDSCSGPVDTFCLLVFDPDKVDYLNVRSDERNSFR 180
           KSR+QYLGPSPGLP L EQP+KE FLDS  GPVD +CLLV DPD+VDY+N++S++R SF 
Sbjct: 121 KSRLQYLGPSPGLPSLDEQPSKEIFLDSLEGPVDGYCLLVLDPDQVDYVNLKSNQRLSFT 180

Query: 181 AITSFGGEKLWETERIN 198
           +  +  GEK W ++RIN
Sbjct: 181 SGQNANGEKCWTSKRIN 197

[Close]
BLAST of CsGy3G007960 vs. TrEMBL
Match: tr|A0A2R6RCG8|A0A2R6RCG8_ACTCH (Pyridoxine/pyridoxamine 5'-phosphate oxidase OS=Actinidia chinensis var. chinensis OX=1590841 GN=CEY00_Acc07562 PE=4 SV=1)

HSP 1 Score: 269.6 bits (688), Expect = 5.5e-69
Identity = 123/197 (62.44%), Postives = 155/197 (78.68%), Query Frame = 0 

Query: 1   MGSAVAPWKSLLLSALESNGHFKHSKFLQLATIGTNGRPSNRTVVFRGFEEGTDRIHIYT 60
           MG+  APWK LLL+ALESN   KHS F QLATIG+NG+PSNRTVVFRGF+E +D+I I T
Sbjct: 1   MGTVAAPWKQLLLNALESNSTLKHSSFFQLATIGSNGKPSNRTVVFRGFQENSDKIQINT 60

Query: 61  DSRNRKIEELKNCPFAEICWYFTESWEQFRISGRMEVVDASCVDATKFKQRAEAWSSISP 120
           D R  KI++LK+CPFAEICWYFT+SWEQFRI+GR++V+  SC D  K +QR ++W + S 
Sbjct: 61  DYRTHKIDDLKHCPFAEICWYFTDSWEQFRINGRIDVIYESCPDPMKLQQREKSWFASSL 120

Query: 121 KSRMQYLGPSPGLPHLAEQPAKEPFLDSCSGPVDTFCLLVFDPDKVDYLNVRSDERNSFR 180
           KSR+QYLGP+PGLP L E P++E  LD  +GPV+ FCLLV DPD+VDYLN++ +ER +F 
Sbjct: 121 KSRLQYLGPNPGLPLLGELPSQESSLDPSAGPVEAFCLLVLDPDQVDYLNLKINERLTFT 180

Query: 181 AITSFGGEKLWETERIN 198
           +  S  GEK W +ERIN
Sbjct: 181 SRLSTDGEKFWTSERIN 197

[Close]
BLAST of CsGy3G007960 vs. TrEMBL
Match: tr|A0A061DTI4|A0A061DTI4_THECC (Pyridoxamine 5'-phosphate oxidase family protein isoform 1 OS=Theobroma cacao OX=3641 GN=TCM_005113 PE=4 SV=1)

HSP 1 Score: 269.2 bits (687), Expect = 7.2e-69
Identity = 123/197 (62.44%), Postives = 152/197 (77.16%), Query Frame = 0 

Query: 1   MGSAVAPWKSLLLSALESNGHFKHSKFLQLATIGTNGRPSNRTVVFRGFEEGTDRIHIYT 60
           MG+  APWK LLL+ALESN H KHS F QLATIG+NGRPSNRTVVFRGF+E +D+  I T
Sbjct: 1   MGTVTAPWKQLLLNALESNSHIKHSSFFQLATIGSNGRPSNRTVVFRGFQENSDKFQINT 60

Query: 61  DSRNRKIEELKNCPFAEICWYFTESWEQFRISGRMEVVDASCVDATKFKQRAEAWSSISP 120
           DSR+ KIEELK+CPFAEICWYFT+SWEQFR SGR++V+D S  +A K +QR ++W + S 
Sbjct: 61  DSRSHKIEELKHCPFAEICWYFTDSWEQFRFSGRIDVIDGSNPEALKLQQREKSWFASSV 120

Query: 121 KSRMQYLGPSPGLPHLAEQPAKEPFLDSCSGPVDTFCLLVFDPDKVDYLNVRSDERNSFR 180
           KSR+QYLGP PG P ++E P +E  LD  +GPV  FCLLV DPD+VDYLN++S++R  F 
Sbjct: 121 KSRLQYLGPIPGFPCISEHPNQEIALDPSTGPVGAFCLLVLDPDQVDYLNLKSNQRLKFI 180

Query: 181 AITSFGGEKLWETERIN 198
           +     G K W +ERIN
Sbjct: 181 STLGLNGVKSWTSERIN 197

The following BLAST results are available for this feature:
BLAST of CsGy3G007960 vs. NCBI nr
Match NameE-valueIdentityDescription
XP_004133803.13.6e-11298.99PREDICTED: pyridoxine/pyridoxamine 5'-phosphate oxidase 2 [Cucumis sativus] >KGN... [more]
XP_008437871.18.8e-10391.37PREDICTED: pyridoxine/pyridoxamine 5'-phosphate oxidase 2 [Cucumis melo] >XP_016... [more]
XP_022924710.11.8e-9283.76pyridoxine/pyridoxamine 5'-phosphate oxidase 2 isoform X1 [Cucurbita moschata][more]
XP_023527386.12.2e-9082.23pyridoxine/pyridoxamine 5'-phosphate oxidase 2 isoform X1 [Cucurbita pepo subsp.... [more]
XP_022980848.12.9e-9082.23pyridoxine/pyridoxamine 5'-phosphate oxidase 2 isoform X1 [Cucurbita maxima][more]
BLAST of CsGy3G007960 vs. TAIR10
Match NameE-valueIdentityDescription
AT2G46580.13.2e-6757.36Pyridoxamine 5'-phosphate oxidase family protein[more]
BLAST of CsGy3G007960 vs. Swiss-Prot
Match NameE-valueIdentityDescription
sp|Q9ZPY1|PPOX2_ARATH5.8e-6657.36Pyridoxine/pyridoxamine 5'-phosphate oxidase 2 OS=Arabidopsis thaliana OX=3702 G... [more]
sp|P21159|PDXH_MYXXA2.8e-0736.17Pyridoxine/pyridoxamine 5'-phosphate oxidase OS=Myxococcus xanthus OX=34 GN=pdxH... [more]
sp|Q1DCS1|PDXH_MYXXD2.8e-0736.17Pyridoxine/pyridoxamine 5'-phosphate oxidase OS=Myxococcus xanthus (strain DK 16... [more]
sp|P53210|YG1B_YEAST2.8e-0734.82Uncharacterized protein YGR017W OS=Saccharomyces cerevisiae (strain ATCC 204508 ... [more]
sp|Q7P203|PDXH_CHRVO1.8e-0632.98Pyridoxine/pyridoxamine 5'-phosphate oxidase OS=Chromobacterium violaceum (strai... [more]
BLAST of CsGy3G007960 vs. TrEMBL
Match NameE-valueIdentityDescription
tr|A0A0A0L745|A0A0A0L745_CUCSA2.3e-11298.99Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_3G119450 PE=4 SV=1[more]
tr|A0A1S4DSQ7|A0A1S4DSQ7_CUCME5.8e-10391.37pyridoxine/pyridoxamine 5'-phosphate oxidase 2 OS=Cucumis melo OX=3656 GN=LOC103... [more]
tr|W9RLI8|W9RLI8_9ROSA3.2e-6962.44Uncharacterized protein OS=Morus notabilis OX=981085 GN=L484_023479 PE=4 SV=1[more]
tr|A0A2R6RCG8|A0A2R6RCG8_ACTCH5.5e-6962.44Pyridoxine/pyridoxamine 5'-phosphate oxidase OS=Actinidia chinensis var. chinens... [more]
tr|A0A061DTI4|A0A061DTI4_THECC7.2e-6962.44Pyridoxamine 5'-phosphate oxidase family protein isoform 1 OS=Theobroma cacao OX... [more]
Annotated Terms
The following terms have been associated with this gene:
Vocabulary: Molecular Function
TermDefinition
GO:0048037cofactor binding
GO:0010181FMN binding
Vocabulary: INTERPRO
TermDefinition
IPR024015Pyridox_Oxase_FMN-dep_Alr4036
IPR012349Split_barrel_FMN-bd
IPR024624Pyridox_Oxase_Alr4036_FMN-bd
GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
Category Term Accession Term Name
biological_process GO:0009443 pyridoxal 5'-phosphate salvage
biological_process GO:0008150 biological_process
cellular_component GO:0005575 cellular_component
molecular_function GO:0010181 FMN binding
molecular_function GO:0004733 pyridoxamine-phosphate oxidase activity
molecular_function GO:0048037 cofactor binding
Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
CsGy3G007960.1CsGy3G007960.1mRNA


InterPro
Analysis Name: InterPro Annotations of cucumber Gy14 genome (v2)
Date Performed: 2018-09-25
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR024624Pyridoxamine 5'-phosphate oxidase, Alr4036 family, FMN-binding domainPFAMPF12766Pyridox_oxase_2coord: 6..98
e-value: 5.3E-28
score: 97.4
IPR012349FMN-binding split barrelGENE3DG3DSA:2.30.110.10coord: 3..197
e-value: 1.4E-57
score: 196.7
IPR024015Pyridoxamine 5'-phosphate oxidase, probable FMN-dependent, Alr4036 familyTIGRFAMTIGR04026TIGR04026coord: 6..197
e-value: 1.0E-49
score: 167.0
NoneNo IPR availablePANTHERPTHR10851PYRIDOXINE-5-PHOSPHATE OXIDASEcoord: 1..197
NoneNo IPR availablePANTHERPTHR10851:SF3SUBFAMILY NOT NAMEDcoord: 1..197
NoneNo IPR availableSUPERFAMILYSSF50475FMN-binding split barrelcoord: 2..196

Synteny
The following gene(s) are orthologous to this gene:
GeneOrthologueOrganismBlock
CsGy3G007960Cla021143Watermelon (97103) v1cgybwmB217
CsGy3G007960Csa3G119450Cucumber (Chinese Long) v2cgybcuB109
CsGy3G007960MELO3C006011Melon (DHL92) v3.5.1cgybmeB200
CsGy3G007960ClCG05G000710Watermelon (Charleston Gray)cgybwcgB203
CsGy3G007960CSPI03G07810Wild cucumber (PI 183967)cgybcpiB110
CsGy3G007960CmaCh14G021190Cucurbita maxima (Rimu)cgybcmaB318
CsGy3G007960CmoCh14G021800Cucurbita moschata (Rifu)cgybcmoB290
CsGy3G007960Lsi05G021350Bottle gourd (USVL1VR-Ls)cgyblsiB196
CsGy3G007960Cp4.1LG03g15960Cucurbita pepo (Zucchini)cgybcpeB406
CsGy3G007960MELO3C006011.2Melon (DHL92) v3.6.1cgybmedB201
CsGy3G007960CsaV3_3G007930Cucumber (Chinese Long) v3cgybcucB117
CsGy3G007960Cla97C05G080820Watermelon (97103) v2cgybwmbB196
CsGy3G007960Bhi01G000367Wax gourdcgybwgoB272
CsGy3G007960Carg25704Silver-seed gourdcarcgybB0131
The following gene(s) are paralogous to this gene:

None

The following block(s) are covering this gene:
GeneOrganismBlock
CsGy3G007960Cucumber (Gy14) v2cgybcgybB085
CsGy3G007960Cucurbita maxima (Rimu)cgybcmaB401
CsGy3G007960Cucurbita maxima (Rimu)cgybcmaB430
CsGy3G007960Cucurbita maxima (Rimu)cgybcmaB464
CsGy3G007960Cucurbita moschata (Rifu)cgybcmoB372
CsGy3G007960Cucurbita moschata (Rifu)cgybcmoB401
CsGy3G007960Cucurbita moschata (Rifu)cgybcmoB430
CsGy3G007960Cucurbita pepo (Zucchini)cgybcpeB359
CsGy3G007960Cucurbita pepo (Zucchini)cgybcpeB428
CsGy3G007960Cucurbita pepo (Zucchini)cgybcpeB454
CsGy3G007960Cucumber (Chinese Long) v2cgybcuB125
CsGy3G007960Bottle gourd (USVL1VR-Ls)cgyblsiB137
CsGy3G007960Melon (DHL92) v3.5.1cgybmeB142
CsGy3G007960Melon (DHL92) v3.5.1cgybmeB218
CsGy3G007960Melon (DHL92) v3.6.1cgybmedB139
CsGy3G007960Watermelon (Charleston Gray)cgybwcgB189
CsGy3G007960Watermelon (Charleston Gray)cgybwcgB221
CsGy3G007960Watermelon (97103) v1cgybwmB238
CsGy3G007960Watermelon (97103) v1cgybwmB243
CsGy3G007960Wild cucumber (PI 183967)cgybcpiB126
CsGy3G007960Silver-seed gourdcarcgybB0980
CsGy3G007960Cucumber (Chinese Long) v3cgybcucB130
CsGy3G007960Watermelon (97103) v2cgybwmbB166
CsGy3G007960Watermelon (97103) v2cgybwmbB214
CsGy3G007960Wax gourdcgybwgoB249
CsGy3G007960Wax gourdcgybwgoB282