CsGy3G007310 (gene) Cucumber (Gy14) v2

Overview
NameCsGy3G007310
Typegene
OrganismCucumis sativus (Cucumber (Gy14) v2)
DescriptionUncharacterized protein
LocationChr3 : 6354503 .. 6354742 (+)
Genome Viewer
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
ATGGTCTGTACAAAAACGCAAAATTCAGATAAATTTCTTACACAAAAGAAGGTTGTAGTTGTAACTAACACATTTCTATTGGAAAACAATGGAGATCTGTATTTCCACTGGGAGTGGCTTCAGACCGAAACTCCATTGCCATTGGAATCAGAACTGGCGACGATTGGATTGAAATCGCGAAAGGATGCTCCTCAAGTCCCCAAGGCAGCTGAGCATCCGCCACGAGTTCAGCTGACATGA

mRNA sequence

ATGGTCTGTACAAAAACGCAAAATTCAGATAAATTTCTTACACAAAAGAAGGTTGTAGTTGTAACTAACACATTTCTATTGGAAAACAATGGAGATCTGTATTTCCACTGGGAGTGGCTTCAGACCGAAACTCCATTGCCATTGGAATCAGAACTGGCGACGATTGGATTGAAATCGCGAAAGGATGCTCCTCAAGTCCCCAAGGCAGCTGAGCATCCGCCACGAGTTCAGCTGACATGA

Coding sequence (CDS)

ATGGTCTGTACAAAAACGCAAAATTCAGATAAATTTCTTACACAAAAGAAGGTTGTAGTTGTAACTAACACATTTCTATTGGAAAACAATGGAGATCTGTATTTCCACTGGGAGTGGCTTCAGACCGAAACTCCATTGCCATTGGAATCAGAACTGGCGACGATTGGATTGAAATCGCGAAAGGATGCTCCTCAAGTCCCCAAGGCAGCTGAGCATCCGCCACGAGTTCAGCTGACATGA

Protein sequence

MVCTKTQNSDKFLTQKKVVVVTNTFLLENNGDLYFHWEWLQTETPLPLESELATIGLKSRKDAPQVPKAAEHPPRVQLT
Homology
[Close]
BLAST of CsGy3G007310 vs. NCBI nr
Match: KGN56346.1 (hypothetical protein Csa_3G116830 [Cucumis sativus])

HSP 1 Score: 164.1 bits (414), Expect = 2.0e-37
Identity = 79/79 (100.00%), Postives = 79/79 (100.00%), Query Frame = 0 

Query: 1  MVCTKTQNSDKFLTQKKVVVVTNTFLLENNGDLYFHWEWLQTETPLPLESELATIGLKSR 60
          MVCTKTQNSDKFLTQKKVVVVTNTFLLENNGDLYFHWEWLQTETPLPLESELATIGLKSR
Sbjct: 1  MVCTKTQNSDKFLTQKKVVVVTNTFLLENNGDLYFHWEWLQTETPLPLESELATIGLKSR 60

Query: 61 KDAPQVPKAAEHPPRVQLT 80
          KDAPQVPKAAEHPPRVQLT
Sbjct: 61 KDAPQVPKAAEHPPRVQLT 79

[Close]
BLAST of CsGy3G007310 vs. TrEMBL
Match: tr|A0A0A0L8A3|A0A0A0L8A3_CUCSA (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_3G116830 PE=4 SV=1)

HSP 1 Score: 164.1 bits (414), Expect = 1.3e-37
Identity = 79/79 (100.00%), Postives = 79/79 (100.00%), Query Frame = 0 

Query: 1  MVCTKTQNSDKFLTQKKVVVVTNTFLLENNGDLYFHWEWLQTETPLPLESELATIGLKSR 60
          MVCTKTQNSDKFLTQKKVVVVTNTFLLENNGDLYFHWEWLQTETPLPLESELATIGLKSR
Sbjct: 1  MVCTKTQNSDKFLTQKKVVVVTNTFLLENNGDLYFHWEWLQTETPLPLESELATIGLKSR 60

Query: 61 KDAPQVPKAAEHPPRVQLT 80
          KDAPQVPKAAEHPPRVQLT
Sbjct: 61 KDAPQVPKAAEHPPRVQLT 79

The following BLAST results are available for this feature:
BLAST of CsGy3G007310 vs. NCBI nr
Match NameE-valueIdentityDescription
KGN56346.12.0e-37100.00hypothetical protein Csa_3G116830 [Cucumis sativus][more]
BLAST of CsGy3G007310 vs. TAIR10
Match NameE-valueIdentityDescription
BLAST of CsGy3G007310 vs. Swiss-Prot
Match NameE-valueIdentityDescription
BLAST of CsGy3G007310 vs. TrEMBL
Match NameE-valueIdentityDescription
tr|A0A0A0L8A3|A0A0A0L8A3_CUCSA1.3e-37100.00Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_3G116830 PE=4 SV=1[more]
GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
Category Term Accession Term Name
biological_process GO:0008150 biological_process
cellular_component GO:0005575 cellular_component
molecular_function GO:0003674 molecular_function
Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
CsGy3G007310.1CsGy3G007310.1mRNA


InterPro
Analysis Name: InterPro Annotations of cucumber Gy14 genome (v2)
Date Performed: 2018-09-25
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 59..79