CsGy2G023620 (gene) Cucumber (Gy14) v2

Overview
NameCsGy2G023620
Typegene
OrganismCucumis sativus (Cucumber (Gy14) v2)
DescriptionUncharacterized protein
LocationChr2 : 31514509 .. 31514694 (-)
Genome Viewer
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: CDSexon
Hold the cursor over a type above to highlight its positions in the sequence below.
ATGCGAACGACGTCGTATAAGGGAAAACGACATGGTTTGGGAGGTGTGTGTGAATCCATTCATCATCGTCATGTTGGTGATGATACCGGGATGAAGCAAAATTTAGGGCGGGTCGAAGCGGAGCTCTCATCCCCATTTGTTTGTGTGCTCCATTGCCTCTCCGTCCAACACTTCTCTGCCTTTTAA

mRNA sequence

ATGCGAACGACGTCGTATAAGGGAAAACGACATGGTTTGGGAGGTGTGTGTGAATCCATTCATCATCGTCATGTTGGTGATGATACCGGGATGAAGCAAAATTTAGGGCGGGTCGAAGCGGAGCTCTCATCCCCATTTGTTTGTGTGCTCCATTGCCTCTCCGTCCAACACTTCTCTGCCTTTTAA

Coding sequence (CDS)

ATGCGAACGACGTCGTATAAGGGAAAACGACATGGTTTGGGAGGTGTGTGTGAATCCATTCATCATCGTCATGTTGGTGATGATACCGGGATGAAGCAAAATTTAGGGCGGGTCGAAGCGGAGCTCTCATCCCCATTTGTTTGTGTGCTCCATTGCCTCTCCGTCCAACACTTCTCTGCCTTTTAA

Protein sequence

MRTTSYKGKRHGLGGVCESIHHRHVGDDTGMKQNLGRVEAELSSPFVCVLHCLSVQHFSAF
Homology
[Close]
BLAST of CsGy2G023620 vs. NCBI nr
Match: KGN62987.1 (hypothetical protein Csa_2G382600 [Cucumis sativus])

HSP 1 Score: 133.3 bits (334), Expect = 2.9e-28
Identity = 61/61 (100.00%), Postives = 61/61 (100.00%), Query Frame = 0 

Query: 1  MRTTSYKGKRHGLGGVCESIHHRHVGDDTGMKQNLGRVEAELSSPFVCVLHCLSVQHFSA 60
          MRTTSYKGKRHGLGGVCESIHHRHVGDDTGMKQNLGRVEAELSSPFVCVLHCLSVQHFSA
Sbjct: 1  MRTTSYKGKRHGLGGVCESIHHRHVGDDTGMKQNLGRVEAELSSPFVCVLHCLSVQHFSA 60

Query: 61 F 62
          F
Sbjct: 61 F 61

[Close]
BLAST of CsGy2G023620 vs. TrEMBL
Match: tr|A0A0A0LQD9|A0A0A0LQD9_CUCSA (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_2G382600 PE=4 SV=1)

HSP 1 Score: 133.3 bits (334), Expect = 1.9e-28
Identity = 61/61 (100.00%), Postives = 61/61 (100.00%), Query Frame = 0 

Query: 1  MRTTSYKGKRHGLGGVCESIHHRHVGDDTGMKQNLGRVEAELSSPFVCVLHCLSVQHFSA 60
          MRTTSYKGKRHGLGGVCESIHHRHVGDDTGMKQNLGRVEAELSSPFVCVLHCLSVQHFSA
Sbjct: 1  MRTTSYKGKRHGLGGVCESIHHRHVGDDTGMKQNLGRVEAELSSPFVCVLHCLSVQHFSA 60

Query: 61 F 62
          F
Sbjct: 61 F 61

The following BLAST results are available for this feature:
BLAST of CsGy2G023620 vs. NCBI nr
Match NameE-valueIdentityDescription
KGN62987.12.9e-28100.00hypothetical protein Csa_2G382600 [Cucumis sativus][more]
BLAST of CsGy2G023620 vs. TAIR10
Match NameE-valueIdentityDescription
BLAST of CsGy2G023620 vs. Swiss-Prot
Match NameE-valueIdentityDescription
BLAST of CsGy2G023620 vs. TrEMBL
Match NameE-valueIdentityDescription
tr|A0A0A0LQD9|A0A0A0LQD9_CUCSA1.9e-28100.00Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_2G382600 PE=4 SV=1[more]
GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
Category Term Accession Term Name
biological_process GO:0008150 biological_process
cellular_component GO:0005575 cellular_component
molecular_function GO:0003674 molecular_function
Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
CsGy2G023620.1CsGy2G023620.1mRNA


Synteny
The following gene(s) are orthologous to this gene:
GeneOrthologueOrganismBlock
CsGy2G023620Csa2G382600Cucumber (Chinese Long) v2cgybcuB057
CsGy2G023620CsaV3_2G032420Cucumber (Chinese Long) v3cgybcucB065
The following gene(s) are paralogous to this gene:

None

The following block(s) are covering this gene:
GeneOrganismBlock
CsGy2G023620Cucumber (Gy14) v2cgybcgybB057
CsGy2G023620Cucurbita maxima (Rimu)cgybcmaB149
CsGy2G023620Cucurbita maxima (Rimu)cgybcmaB168
CsGy2G023620Cucurbita maxima (Rimu)cgybcmaB258
CsGy2G023620Cucurbita moschata (Rifu)cgybcmoB140
CsGy2G023620Cucurbita moschata (Rifu)cgybcmoB160
CsGy2G023620Cucurbita moschata (Rifu)cgybcmoB244
CsGy2G023620Cucurbita pepo (Zucchini)cgybcpeB169
CsGy2G023620Cucurbita pepo (Zucchini)cgybcpeB177
CsGy2G023620Cucurbita pepo (Zucchini)cgybcpeB256
CsGy2G023620Cucurbita pepo (Zucchini)cgybcpeB260
CsGy2G023620Cucumber (Chinese Long) v2cgybcuB074
CsGy2G023620Bottle gourd (USVL1VR-Ls)cgyblsiB109
CsGy2G023620Melon (DHL92) v3.6.1cgybmedB101
CsGy2G023620Bottle gourd (USVL1VR-Ls)cgyblsiB126
CsGy2G023620Melon (DHL92) v3.5.1cgybmeB102
CsGy2G023620Melon (DHL92) v3.5.1cgybmeB129
CsGy2G023620Melon (DHL92) v3.6.1cgybmedB128
CsGy2G023620Watermelon (Charleston Gray)cgybwcgB132
CsGy2G023620Watermelon (Charleston Gray)cgybwcgB152
CsGy2G023620Watermelon (97103) v1cgybwmB105
CsGy2G023620Watermelon (97103) v1cgybwmB121
CsGy2G023620Wild cucumber (PI 183967)cgybcpiB057
CsGy2G023620Wild cucumber (PI 183967)cgybcpiB075
CsGy2G023620Silver-seed gourdcarcgybB0148
CsGy2G023620Silver-seed gourdcarcgybB0631
CsGy2G023620Silver-seed gourdcarcgybB0960
CsGy2G023620Cucumber (Chinese Long) v3cgybcucB082
CsGy2G023620Watermelon (97103) v2cgybwmbB129
CsGy2G023620Watermelon (97103) v2cgybwmbB153
CsGy2G023620Wax gourdcgybwgoB151
CsGy2G023620Wax gourdcgybwgoB191