CsGy2G016230 (gene) Cucumber (Gy14) v2 | Cucurbit Genomics Database (CuGenDB)

Overview


Name	CsGy2G016230
Type	gene
Organism	Cucumis sativus (Cucumber (Gy14) v2)
Description	Ras-related protein Rab-18-B
Location	Chr2 : 16254006 .. 16257226 (+)

Genome Viewer

Gene Expression

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonCDSthree_prime_UTR

Hold the cursor over a type above to highlight its positions in the sequence below.

TTGTTGAATTGGGATTTATATGCTAGAATGCTTTCTGGAATTTCAAGGGCTACAGTGTTGCTGTACTGTGAGCTAGTGGCTTTGAACCAACTTTGTGGTTTAGTAAAATTTGTTCCCATATACTTGTTGTTTAACAAGTATCGAGATGATTAAATTTACCACAACGCATTTGGGCTTTTAGGTTCATTGGTGAATTAACATGTACTAGAGCAGGACGTTTTGTGTTTGAAATATTGTCATTTCCACACTATTAATATTAATTTTCATTTGTTGGGTATTTTAGGAATTCTCAAGCCCATATCACAAGTGAGAGAAGTGTTAAAACGTTGATATAATTAAATTTACCATAACCAATCAACTAAGTTTTGAGTTTAGGATCGTTTAGCAATTCATGACTTAGGAGGGCTATTGTGTCCTTCGAAAGAGCAGATTATACTTGGTGATGCAGGTGCAGGGTGCCCTTAAGGTTTTCATCATTGAGGAGTTTGTAGTGACAATTAAAAGGTCGCCTAGAGAGAGTAGTTTTTTTTTTCTTTCTTTCTCAAACAATTAATTTTTGTGAGAGAAGCTTGTGATTATCATGGTTTATGGATTGGACTGTAAATTGTGCATCGCAAATGTTTGTAATGCATCACTCCCCATTTTAATCACTACTGCACAAAGTTCCATGTCCCATTTAAGTTTAAAATACTGTTGCAACAAAAAGCAAGAATATTATGTAAGATGGATTGGATGGTTGATACTATTTTAACCTTACAACTCCTCCCTTCCTCTGTTTAAGTGTGCTGCGGAGAAGCAGCCTTCTTTAACTTCCCGTTGCTCTCGTGTAATCTCCATTTTGTGCATTGCTCCAGGTGTGGATTTCAAGATCAAGATGGTAACAGTTGGTGGAAAAAAATTGAAGCTAACAATTTGGGATACAGGTAACTGGATGATTGACTAGTTCTTTCTGGTTACATTTTTACTATTTTACTTGTCCCAGCTTATCTACATAGGATATTTTATGAAGTTTTCTTTTTCCCATCCAACGTGAGAAAATAACAGTTGTTCAGGTGTTATAAAAAACTAATGTGATTCAATGCTCTTTGTCGAGGGTTTTCTTTTCCCCATTTCGTTTACGACACTTGCCAGTTTGATGCTTTCGAGCATGTCTTTATCCTATGTTCTTGTATGCAGCTGGACAAGAGAGATTTGGAACATTGACAAGCTCTTACTACAGAGGCGCACATGGAATCATCCTAGGTATGATAGAAAGGAGACAAAAATTCTCTTTCCACAATTGTCCTGAAAATAAACTTCGAAAGTTTAATCAAGACTCTGTTCAATGATATTAAATGAAAAACAATCAGAATTTGAGAGCATATGGAGACTTTTTTCTTGGTAACTGAGACAACTAGAATTGCGAATTGACATTAGAAATAGACTAAAGAGACTGAGAATCATGCTTCACCTTCATCTTTTATATTCTCTCATACAGACAGTTAATAGAAGTTGAGGCATTTGTTTGCCTGTCCGAGTTAAGCAGTATTGAAAACAAACGCTCCATTCAAAGCAGTTGGCTGTTTTATTTTCCGTCATGCCAACAACATCTGACACCTTTTTTCTCCTCATTTATGTTGTGTTCTTTTTCCATGTTTTCTTTCTTGCGTTTTATAAGTATCCGATATCTTTCTATTTTGGAAACTATCTCTCATGCCATGTTTTCTCACCATTGAATGTTTTGAATTTAGTTTGAACTTCATGAGGCCTGACACTGATCTATGTTTCACCATTAGTGTACGATGTTACCCGGCGGGAGACGTTTACAAACTTGATAAATGTATGGGCAAAGGAAGTAGAGCTGTACTTAACCAATCGTGAGTGCATAAAGATTCTAGTAGGAAATAAAGTCGATCGGGTAAGTTTGTACTACTATTCCACATCCATCCTTTGTCAACATTCTGTTTCCATACTGTCTTAACTATCATGCATTGGACAACATTGATAATAGTCAAACCTTTAATCCTTCATTCCAACTTACATTACATTAGGAGAGAATTTTTAAATCATGTTTTTAAGTGTGGCTGCCATGTTCACTGAATATTATTGACAGGGTAGTGACAGAGCAGTAACAACAGAAGAAGGCATGGAAGTTGCCAAGAAGCATAAAAGTTTATTTCTTGAGTGCAGTGCTCGAACTCGAGAAAATGTCGACAGATGCTTTAAAGAACTCTCTTCAAAGGTAACACTCTTAATTGTTATAGTGGAACTAAATGTCGACAGTGCTCCTAAGTATGGTCACTGCACAGCGTACACCGGGTGATTTGAAAAATTGGGAAAAAGAGGTGTGTTCAAAACTATTGAGGGAGAAGGGGTGTCTTTTTTATGTCATTTTGTGGAGTGGGTCCCACTAGCTATAAATTATTATTATTACTATTAGTACTACTACTGAAAACTTTCATTTATTTTCCATGTTGGGTTGGCTGTAAAGAACGATCGAAACCCGATCTTCAATGCCAAATATATTTTATTTCATGGCCTTTGGGCATGGTCTAAGTGGTTTATCGTATATAATCCAGATGATGGAAGTTCCAAGTCTACTGGAAAATGGATCTGTTGTTGTGAAACAGAAAATTTTGGACAAAACACAAGCACGCAAAGAAGTGGAAGTGAACGACAGGGGTTGTTGCCACTGAGAAAACCGTGTAACGGCACAAAACAGAACTTACAGAAACAGATTTAGAAGATCTTAGATACTGCTGGTAGAAAATGTTGATCAGAACAGACCCAAGAAAATACACCAAGGGGAAGATTCCATGATCTTTTGCAATTCCATTTTGGCTACCACTGTTTCCAGCAGTTTTCTTTTTCTATCTTAAAAATGCATTTCAATAGTATCTTTAGGATCTCTGTATATGGTTGGTTATATTTTGGGCAAAAATGAGTTGCTGAATTTTGTTGAGACAGATTTTGAGTGAAAATATGTAATAAAAAATATGTAGATAATGTGAATACAGTTTGTTTATTTATTTTTTGTTTTAGTTTTATATATTGATAAGGGCTATTATGCTGTAGAAGCTTCCTTATACTTTGGTCTTAAATCTATAGAATGCTTTAAATAATTCTCCTAAAGTGATGAAGTGGAGAACTTTGATCATTAATTGTCTATTGATATATATATTTGTAAGATATATCAAGAAATTCATTTTGTTGTTAAATTTTAAATTTTATTAAATAGCTCG

mRNA sequence

TTGTTGAATTGGGATTTATATGCTAGAATGCTTTCTGGAATTTCAAGGGCTACAGTGTTGCTGTACTGTGTGGATTTCAAGATCAAGATGGTAACAGTTGGTGGAAAAAAATTGAAGCTAACAATTTGGGATACAGCTGGACAAGAGAGATTTGGAACATTGACAAGCTCTTACTACAGAGGCGCACATGGAATCATCCTAGTGTACGATGTTACCCGGCGGGAGACGTTTACAAACTTGATAAATGTATGGGCAAAGGAAGTAGAGCTGTACTTAACCAATCGTGAGTGCATAAAGATTCTAGTAGGAAATAAAGTCGATCGGGGTAGTGACAGAGCAGTAACAACAGAAGAAGGCATGGAAGTTGCCAAGAAGCATAAAAGTTTATTTCTTGAGTGCAGTGCTCGAACTCGAGAAAATGTCGACAGATGCTTTAAAGAACTCTCTTCAAAGATGATGGAAGTTCCAAGTCTACTGGAAAATGGATCTGTTGTTGTGAAACAGAAAATTTTGGACAAAACACAAGCACGCAAAGAAGTGGAAGTGAACGACAGGGGTTGTTGCCACTGAGAAAACCGTGTAACGGCACAAAACAGAACTTACAGAAACAGATTTAGAAGATCTTAGATACTGCTGGTAGAAAATGTTGATCAGAACAGACCCAAGAAAATACACCAAGGGGAAGATTCCATGATCTTTTGCAATTCCATTTTGGCTACCACTGTTTCCAGCAGTTTTCTTTTTCTATCTTAAAAATGCATTTCAATAGTATCTTTAGGATCTCTGTATATGGTTGGTTATATTTTGGGCAAAAATGAGTTGCTGAATTTTGTTGAGACAGATTTTGAGTGAAAATATGTAATAAAAAATATGTAGATAATGTGAATACAGTTTGTTTATTTATTTTTTGTTTTAGTTTTATATATTGATAAGGGCTATTATGCTGTAGAAGCTTCCTTATACTTTGGTCTTAAATCTATAGAATGCTTTAAATAATTCTCCTAAAGTGATGAAGTGGAGAACTTTGATCATTAATTGTCTATTGATATATATATTTGTAAGATATATCAAGAAATTCATTTTGTTGTTAAATTTTAAATTTTATTAAATAGCTCG

Coding sequence (CDS)

TTGTTGAATTGGGATTTATATGCTAGAATGCTTTCTGGAATTTCAAGGGCTACAGTGTTGCTGTACTGTGTGGATTTCAAGATCAAGATGGTAACAGTTGGTGGAAAAAAATTGAAGCTAACAATTTGGGATACAGCTGGACAAGAGAGATTTGGAACATTGACAAGCTCTTACTACAGAGGCGCACATGGAATCATCCTAGTGTACGATGTTACCCGGCGGGAGACGTTTACAAACTTGATAAATGTATGGGCAAAGGAAGTAGAGCTGTACTTAACCAATCGTGAGTGCATAAAGATTCTAGTAGGAAATAAAGTCGATCGGGGTAGTGACAGAGCAGTAACAACAGAAGAAGGCATGGAAGTTGCCAAGAAGCATAAAAGTTTATTTCTTGAGTGCAGTGCTCGAACTCGAGAAAATGTCGACAGATGCTTTAAAGAACTCTCTTCAAAGATGATGGAAGTTCCAAGTCTACTGGAAAATGGATCTGTTGTTGTGAAACAGAAAATTTTGGACAAAACACAAGCACGCAAAGAAGTGGAAGTGAACGACAGGGGTTGTTGCCACTGA

Protein sequence

LLNWDLYARMLSGISRATVLLYCVDFKIKMVTVGGKKLKLTIWDTAGQERFGTLTSSYYRGAHGIILVYDVTRRETFTNLINVWAKEVELYLTNRECIKILVGNKVDRGSDRAVTTEEGMEVAKKHKSLFLECSARTRENVDRCFKELSSKMMEVPSLLENGSVVVKQKILDKTQARKEVEVNDRGCCH

Homology

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BLAST of CsGy2G016230 vs. NCBI nr
Match: XP_004150373.1 (PREDICTED: ras-related protein RABC2a-like [Cucumis sativus] >KGN62197.1 hypothetical protein Csa_2G326500 [Cucumis sativus])

HSP 1 Score: 334.7 bits (857), Expect = 2.0e-88
Identity = 166/166 (100.00%), Postives = 166/166 (100.00%), Query Frame = 0


Query: 24  VDFKIKMVTVGGKKLKLTIWDTAGQERFGTLTSSYYRGAHGIILVYDVTRRETFTNLINV 83
           VDFKIKMVTVGGKKLKLTIWDTAGQERFGTLTSSYYRGAHGIILVYDVTRRETFTNLINV
Sbjct: 50  VDFKIKMVTVGGKKLKLTIWDTAGQERFGTLTSSYYRGAHGIILVYDVTRRETFTNLINV 109

Query: 84  WAKEVELYLTNRECIKILVGNKVDRGSDRAVTTEEGMEVAKKHKSLFLECSARTRENVDR 143
           WAKEVELYLTNRECIKILVGNKVDRGSDRAVTTEEGMEVAKKHKSLFLECSARTRENVDR
Sbjct: 110 WAKEVELYLTNRECIKILVGNKVDRGSDRAVTTEEGMEVAKKHKSLFLECSARTRENVDR 169

Query: 144 CFKELSSKMMEVPSLLENGSVVVKQKILDKTQARKEVEVNDRGCCH 190
           CFKELSSKMMEVPSLLENGSVVVKQKILDKTQARKEVEVNDRGCCH
Sbjct: 170 CFKELSSKMMEVPSLLENGSVVVKQKILDKTQARKEVEVNDRGCCH 215

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BLAST of CsGy2G016230 vs. NCBI nr
Match: XP_008456546.1 (PREDICTED: ras-related protein RABC2a-like [Cucumis melo])

HSP 1 Score: 322.0 bits (824), Expect = 1.3e-84
Identity = 155/166 (93.37%), Postives = 165/166 (99.40%), Query Frame = 0


Query: 24  VDFKIKMVTVGGKKLKLTIWDTAGQERFGTLTSSYYRGAHGIILVYDVTRRETFTNLINV 83
           VDFKIKMVTVGGK+LKLTIWDTAGQERFGTLTSSYYRGAHGIILVYDVTRRETFTNLIN+
Sbjct: 50  VDFKIKMVTVGGKRLKLTIWDTAGQERFGTLTSSYYRGAHGIILVYDVTRRETFTNLINI 109

Query: 84  WAKEVELYLTNRECIKILVGNKVDRGSDRAVTTEEGMEVAKKHKSLFLECSARTRENVDR 143
           WAKEVELYLTNRECIKILVGNKVDRGS+RAVTTEEGME+AK+HKSLFLECSARTRENVDR
Sbjct: 110 WAKEVELYLTNRECIKILVGNKVDRGSERAVTTEEGMEIAKEHKSLFLECSARTRENVDR 169

Query: 144 CFKELSSKMMEVPSLLENGSVVVKQKILDKTQARKEVEVNDRGCCH 190
           CF+ELSSK++EVPSLLENGS+VVKQKILDKT+A KEVEVNDRGCCH
Sbjct: 170 CFRELSSKILEVPSLLENGSIVVKQKILDKTRAHKEVEVNDRGCCH 215

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BLAST of CsGy2G016230 vs. NCBI nr
Match: XP_022952871.1 (ras-related protein RABC2a-like [Cucurbita moschata] >XP_022952881.1 ras-related protein RABC2a-like [Cucurbita moschata] >XP_023514704.1 ras-related protein RABC2a-like [Cucurbita pepo subsp. pepo] >XP_023514780.1 ras-related protein RABC2a-like [Cucurbita pepo subsp. pepo])

HSP 1 Score: 299.3 bits (765), Expect = 9.3e-78
Identity = 148/165 (89.70%), Postives = 159/165 (96.36%), Query Frame = 0


Query: 24  VDFKIKMVTVGGKKLKLTIWDTAGQERFGTLTSSYYRGAHGIILVYDVTRRETFTNLINV 83
           VDFKIKMVTVGGK+LKLTIWDTAGQERFGTLTSSYYRGAHGIILVYDVTRRETFTNL++V
Sbjct: 50  VDFKIKMVTVGGKRLKLTIWDTAGQERFGTLTSSYYRGAHGIILVYDVTRRETFTNLMDV 109

Query: 84  WAKEVELYLTNRECIKILVGNKVDRGSDRAVTTEEGMEVAKKHKSLFLECSARTRENVDR 143
           WAKEVE+YLTN ECIKILVGNKVDRGS+RAV+TEEGM VAK+H+SLFLECSARTRENVDR
Sbjct: 110 WAKEVEMYLTNHECIKILVGNKVDRGSERAVSTEEGMAVAKEHQSLFLECSARTRENVDR 169

Query: 144 CFKELSSKMMEVPSLLENGSVVVKQKILDKTQARKEVEVNDRGCC 189
           CFKELSSK++EVPSLLENGSVVVKQKILDKT+ARK  E ND GCC
Sbjct: 170 CFKELSSKILEVPSLLENGSVVVKQKILDKTRARK--EANDGGCC 212

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BLAST of CsGy2G016230 vs. NCBI nr
Match: XP_022990456.1 (ras-related protein RABC2a-like [Cucurbita maxima])

HSP 1 Score: 296.2 bits (757), Expect = 7.9e-77
Identity = 147/165 (89.09%), Postives = 157/165 (95.15%), Query Frame = 0


Query: 24  VDFKIKMVTVGGKKLKLTIWDTAGQERFGTLTSSYYRGAHGIILVYDVTRRETFTNLINV 83
           VDFKIKMVTVGGK+LKLTIWDTAGQERFGTLTSSYYRGAHGIILVYDVTRRETFTNL+ V
Sbjct: 50  VDFKIKMVTVGGKRLKLTIWDTAGQERFGTLTSSYYRGAHGIILVYDVTRRETFTNLMGV 109

Query: 84  WAKEVELYLTNRECIKILVGNKVDRGSDRAVTTEEGMEVAKKHKSLFLECSARTRENVDR 143
           WAKEVE+YLTN ECIKILVGNKVDRGS+RAV+TEEGM VAK+H+SLFLECSARTRENVDR
Sbjct: 110 WAKEVEMYLTNHECIKILVGNKVDRGSERAVSTEEGMAVAKEHQSLFLECSARTRENVDR 169

Query: 144 CFKELSSKMMEVPSLLENGSVVVKQKILDKTQARKEVEVNDRGCC 189
           CFKELSSK++EVPSLLENGSVVVKQKILDKT+A K  E ND GCC
Sbjct: 170 CFKELSSKILEVPSLLENGSVVVKQKILDKTRALK--EANDGGCC 212

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BLAST of CsGy2G016230 vs. NCBI nr
Match: XP_022133444.1 (ras-related protein RABC2a-like [Momordica charantia])

HSP 1 Score: 281.2 bits (718), Expect = 2.6e-72
Identity = 136/166 (81.93%), Postives = 152/166 (91.57%), Query Frame = 0


Query: 24  VDFKIKMVTVGGKKLKLTIWDTAGQERFGTLTSSYYRGAHGIILVYDVTRRETFTNLINV 83
           VDFKIK VTVGGK+LKLTIWDTAGQERFG LTSSYYRGAHGIILVYDVTRRETFTNL+N+
Sbjct: 50  VDFKIKTVTVGGKRLKLTIWDTAGQERFGMLTSSYYRGAHGIILVYDVTRRETFTNLLNI 109

Query: 84  WAKEVELYLTNRECIKILVGNKVDRGSDRAVTTEEGMEVAKKHKSLFLECSARTRENVDR 143
           WAKEVELYLTN ECIKILVGNKVDRGS+R V+TEEGM VA +HKS+FLECSA+TRENVDR
Sbjct: 110 WAKEVELYLTNHECIKILVGNKVDRGSERVVSTEEGMAVAAEHKSMFLECSAKTRENVDR 169

Query: 144 CFKELSSKMMEVPSLLENGSVVVKQKILDKTQARKEVEVNDRGCCH 190
           CF++L  K+++VPSLLENGSV +KQ+ILDKT+ARK  E  D GCCH
Sbjct: 170 CFRDLCLKILKVPSLLENGSVAMKQQILDKTRARKAAE--DGGCCH 213

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BLAST of CsGy2G016230 vs. TAIR10
Match: AT5G03530.1 (RAB GTPase homolog C2A)

HSP 1 Score: 231.9 bits (590), Expect = 3.3e-61
Identity = 114/166 (68.67%), Postives = 140/166 (84.34%), Query Frame = 0


Query: 24  VDFKIKMVTVGGKKLKLTIWDTAGQERFGTLTSSYYRGAHGIILVYDVTRRETFTNLINV 83
           VDFKIK +TVGGK+LKLTIWDTAGQERF TLTSSYYRGA GIILVYDVTRRETFTNL++V
Sbjct: 47  VDFKIKQLTVGGKRLKLTIWDTAGQERFRTLTSSYYRGAQGIILVYDVTRRETFTNLVDV 106

Query: 84  WAKEVELYLTNRECIKILVGNKVDRGSDRAVTTEEGMEVAKKHKSLFLECSARTRENVDR 143
           W KE+ELY TN+EC+++LVGNKVDR S+R V+ EEG+ +AK+   +FLECSARTR+NV++
Sbjct: 107 WGKEIELYSTNQECVRMLVGNKVDRESERGVSREEGIALAKELNCMFLECSARTRQNVEQ 166

Query: 144 CFKELSSKMMEVPSLLENGSVVVKQKILDKTQARKEVEVNDR-GCC 189
           CF+EL+ K+MEVPSLLE GS  VK+ IL   + + E + N + GCC
Sbjct: 167 CFEELALKIMEVPSLLEEGSSAVKRNIL---KQKPEHQTNTQSGCC 209

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BLAST of CsGy2G016230 vs. TAIR10
Match: AT3G09910.1 (RAB GTPase homolog C2B)

HSP 1 Score: 211.5 bits (537), Expect = 4.6e-55
Identity = 104/146 (71.23%), Postives = 123/146 (84.25%), Query Frame = 0


Query: 24  VDFKIKMVTVGGKKLKLTIWDTAGQERFGTLTSSYYRGAHGIILVYDVTRRETFTNLINV 83
           VDFKIK + V GK+LKLTIWDTAGQE+F TLTSSY+RG+ GIILVYDVT+RETF NL ++
Sbjct: 47  VDFKIKQMKVRGKRLKLTIWDTAGQEKFRTLTSSYFRGSQGIILVYDVTKRETFLNLADI 106

Query: 84  WAKEVELYLTNRECIKILVGNKVDRGSDRAVTTEEGMEVAKKHKSLFLECSARTRENVDR 143
           WAKE+ELY TN +CIK+LVGNKVDR S+R V+ EEGM +AK    LF ECSARTRENV+ 
Sbjct: 107 WAKEIELYSTNHDCIKMLVGNKVDRESERKVSREEGMALAKDLNCLFHECSARTRENVNG 166

Query: 144 CFKELSSKMMEVPSLLENGSVVVKQK 170
           CF+EL+ K+MEVPSLLE GS  VK+K
Sbjct: 167 CFEELALKIMEVPSLLEEGSSSVKRK 192

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BLAST of CsGy2G016230 vs. TAIR10
Match: AT1G43890.1 (RAB GTPASE HOMOLOG B18)

HSP 1 Score: 206.1 bits (523), Expect = 1.9e-53
Identity = 99/165 (60.00%), Postives = 130/165 (78.79%), Query Frame = 0


Query: 24  VDFKIKMVTVGGKKLKLTIWDTAGQERFGTLTSSYYRGAHGIILVYDVTRRETFTNLINV 83
           VDFK+K +T+G KKLKL IWDTAGQERF TLTSSYYRGA GII+VYDVTRR+TFTNL ++
Sbjct: 47  VDFKVKYLTIGEKKLKLAIWDTAGQERFRTLTSSYYRGAQGIIMVYDVTRRDTFTNLSDI 106

Query: 84  WAKEVELYLTNRECIKILVGNKVDRGSDRAVTTEEGMEVAKKHKSLFLECSARTRENVDR 143
           WAKE++LY TN++CIK+LVGNKVD+ S+RAV+ +EG++ A+++  LFLECSA+TR NV++
Sbjct: 107 WAKEIDLYSTNQDCIKMLVGNKVDKESERAVSKKEGIDFAREYGCLFLECSAKTRVNVEQ 166

Query: 144 CFKELSSKMMEVPSLLENGSVVVKQKILDKTQARKEVEVNDRGCC 189
           CF+EL  K++E PSL   GS   K+ I  +  A +    +   CC
Sbjct: 167 CFEELVLKILETPSLTAEGSSGGKKNIFKQNPA-QTTSTSSSYCC 210

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BLAST of CsGy2G016230 vs. TAIR10
Match: AT3G11730.1 (Ras-related small GTP-binding family protein)

HSP 1 Score: 124.8 bits (312), Expect = 5.7e-29
Identity = 71/177 (40.11%), Postives = 99/177 (55.93%), Query Frame = 0


Query: 24  VDFKIKMVTVGGKKLKLTIWDTAGQERFGTLTSSYYRGAHGIILVYDVTRRETFTNLINV 83
           VDFKI+ +   GK +KL IWDTAGQERF T+TSSYYRGAHGII+VYD T  E+F N +  
Sbjct: 43  VDFKIRTIEQDGKTIKLQIWDTAGQERFRTITSSYYRGAHGIIIVYDCTEMESFNN-VKQ 102

Query: 84  WAKEVELYLTNRECIKILVGNKVDRGSDRAVTTEEGMEVAKKHKSLFLECSARTRENVDR 143
           W  E++ Y     C K+L+GNK D    + V+TE G  +A +    FLE SA+   NV++
Sbjct: 103 WLSEIDRYANESVC-KLLIGNKNDMVESKVVSTETGRALADELGIPFLETSAKDSINVEQ 162

Query: 144 CFKELSSKMMEVPSLLENGSVVVKQKILDKTQARK------------EVEVNDRGCC 189
            F  ++ +              +K+K+  +T A K             ++ N+ GCC
Sbjct: 163 AFLTIAGE--------------IKKKMGSQTNANKTSGPGTVQMKGQPIQQNNGGCC 203

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BLAST of CsGy2G016230 vs. TAIR10
Match: AT3G09900.1 (RAB GTPase homolog E1E)

HSP 1 Score: 124.4 bits (311), Expect = 7.5e-29
Identity = 69/170 (40.59%), Postives = 105/170 (61.76%), Query Frame = 0


Query: 24  VDFKIKMVTVGGKKLKLTIWDTAGQERFGTLTSSYYRGAHGIILVYDVTRRETFTNLINV 83
           +DFKI+ V + GK++KL IWDTAGQERF T+T++YYRGA GI+LVYDVT   +F N+ N 
Sbjct: 50  IDFKIRTVELDGKRIKLQIWDTAGQERFRTITTAYYRGAMGILLVYDVTDESSFNNIRN- 109

Query: 84  WAKEVELYLTNRECIKILVGNKVDRG-SDRAVTTEEGMEVAKKHKSLFLECSARTRENVD 143
           W K +E + ++    KILVGNK D   S RAV T +G  +A ++   F E SA+T +NV+
Sbjct: 110 WMKNIEQHASD-SVNKILVGNKADMDESKRAVPTSKGQALADEYGIKFFETSAKTNQNVE 169

Query: 144 RCF----KELSSKMMEVPSLLENGSVVVKQKILDKTQARKEVEVNDRGCC 189
           + F    K++  ++ E  +  E   + + ++  +K  +      N++  C
Sbjct: 170 QVFLSIAKDIKQRLTESDTKAEPQGIKITKQDANKASSS---STNEKSAC 214

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BLAST of CsGy2G016230 vs. Swiss-Prot
Match: sp|O49841|RAC2A_ARATH (Ras-related protein RABC2a OS=Arabidopsis thaliana OX=3702 GN=RABC2A PE=1 SV=1)

HSP 1 Score: 231.9 bits (590), Expect = 6.0e-60
Identity = 114/166 (68.67%), Postives = 140/166 (84.34%), Query Frame = 0


Query: 24  VDFKIKMVTVGGKKLKLTIWDTAGQERFGTLTSSYYRGAHGIILVYDVTRRETFTNLINV 83
           VDFKIK +TVGGK+LKLTIWDTAGQERF TLTSSYYRGA GIILVYDVTRRETFTNL++V
Sbjct: 47  VDFKIKQLTVGGKRLKLTIWDTAGQERFRTLTSSYYRGAQGIILVYDVTRRETFTNLVDV 106

Query: 84  WAKEVELYLTNRECIKILVGNKVDRGSDRAVTTEEGMEVAKKHKSLFLECSARTRENVDR 143
           W KE+ELY TN+EC+++LVGNKVDR S+R V+ EEG+ +AK+   +FLECSARTR+NV++
Sbjct: 107 WGKEIELYSTNQECVRMLVGNKVDRESERGVSREEGIALAKELNCMFLECSARTRQNVEQ 166

Query: 144 CFKELSSKMMEVPSLLENGSVVVKQKILDKTQARKEVEVNDR-GCC 189
           CF+EL+ K+MEVPSLLE GS  VK+ IL   + + E + N + GCC
Sbjct: 167 CFEELALKIMEVPSLLEEGSSAVKRNIL---KQKPEHQTNTQSGCC 209

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BLAST of CsGy2G016230 vs. Swiss-Prot
Match: sp|Q9SF92|RAC2B_ARATH (Ras-related protein RABC2b OS=Arabidopsis thaliana OX=3702 GN=RABC2B PE=2 SV=1)

HSP 1 Score: 211.5 bits (537), Expect = 8.4e-54
Identity = 104/146 (71.23%), Postives = 123/146 (84.25%), Query Frame = 0


Query: 24  VDFKIKMVTVGGKKLKLTIWDTAGQERFGTLTSSYYRGAHGIILVYDVTRRETFTNLINV 83
           VDFKIK + V GK+LKLTIWDTAGQE+F TLTSSY+RG+ GIILVYDVT+RETF NL ++
Sbjct: 47  VDFKIKQMKVRGKRLKLTIWDTAGQEKFRTLTSSYFRGSQGIILVYDVTKRETFLNLADI 106

Query: 84  WAKEVELYLTNRECIKILVGNKVDRGSDRAVTTEEGMEVAKKHKSLFLECSARTRENVDR 143
           WAKE+ELY TN +CIK+LVGNKVDR S+R V+ EEGM +AK    LF ECSARTRENV+ 
Sbjct: 107 WAKEIELYSTNHDCIKMLVGNKVDRESERKVSREEGMALAKDLNCLFHECSARTRENVNG 166

Query: 144 CFKELSSKMMEVPSLLENGSVVVKQK 170
           CF+EL+ K+MEVPSLLE GS  VK+K
Sbjct: 167 CFEELALKIMEVPSLLEEGSSSVKRK 192

[Close]

BLAST of CsGy2G016230 vs. Swiss-Prot
Match: sp|O23657|RABC1_ARATH (Ras-related protein RABC1 OS=Arabidopsis thaliana OX=3702 GN=RABC1 PE=1 SV=1)

HSP 1 Score: 206.1 bits (523), Expect = 3.5e-52
Identity = 99/165 (60.00%), Postives = 130/165 (78.79%), Query Frame = 0


Query: 24  VDFKIKMVTVGGKKLKLTIWDTAGQERFGTLTSSYYRGAHGIILVYDVTRRETFTNLINV 83
           VDFK+K +T+G KKLKL IWDTAGQERF TLTSSYYRGA GII+VYDVTRR+TFTNL ++
Sbjct: 47  VDFKVKYLTIGEKKLKLAIWDTAGQERFRTLTSSYYRGAQGIIMVYDVTRRDTFTNLSDI 106

Query: 84  WAKEVELYLTNRECIKILVGNKVDRGSDRAVTTEEGMEVAKKHKSLFLECSARTRENVDR 143
           WAKE++LY TN++CIK+LVGNKVD+ S+RAV+ +EG++ A+++  LFLECSA+TR NV++
Sbjct: 107 WAKEIDLYSTNQDCIKMLVGNKVDKESERAVSKKEGIDFAREYGCLFLECSAKTRVNVEQ 166

Query: 144 CFKELSSKMMEVPSLLENGSVVVKQKILDKTQARKEVEVNDRGCC 189
           CF+EL  K++E PSL   GS   K+ I  +  A +    +   CC
Sbjct: 167 CFEELVLKILETPSLTAEGSSGGKKNIFKQNPA-QTTSTSSSYCC 210

[Close]

BLAST of CsGy2G016230 vs. Swiss-Prot
Match: sp|P36862|YPTV3_VOLCA (GTP-binding protein yptV3 OS=Volvox carteri OX=3067 GN=YPTV3 PE=3 SV=1)

HSP 1 Score: 158.7 bits (400), Expect = 6.4e-38
Identity = 83/160 (51.88%), Postives = 108/160 (67.50%), Query Frame = 0


Query: 6   LYARMLSGI-SRATVLLYCVDFKIKMVTVGGKKLKLTIWDTAGQERFGTLTSSYYRGAHG 65
           +  R  SGI   +T     VDFK+K +T  GK+ KLTIWDTAGQERF TLTSSYYRGA G
Sbjct: 25  ILTRFTSGIFEESTTSTIGVDFKVKYLTADGKRCKLTIWDTAGQERFRTLTSSYYRGAQG 84

Query: 66  IILVYDVTRRETFTNLINVWAKEVELYLTNRECIKILVGNKVDRGSDRAVTTEEGMEVAK 125
           II VYDVTRR+TF +L   W +E ++Y T    IK++V NKVD  + R V++EEG + A+
Sbjct: 85  IIFVYDVTRRDTFESLEANWMREFDIYSTVESAIKMVVANKVDLSAQRQVSSEEGHDFAR 144

Query: 126 KHKSLFLECSARTRENVDRCFKELSSKMMEVPSLLENGSV 165
           +H  LF+E SAR    V + F+EL  K+++ P LLE  +V
Sbjct: 145 RHGCLFVETSARANLAVGQAFEELLLKILDTPLLLETTAV 184

[Close]

BLAST of CsGy2G016230 vs. Swiss-Prot
Match: sp|Q6DHC1|RB18B_DANRE (Ras-related protein Rab-18-B OS=Danio rerio OX=7955 GN=rab18b PE=2 SV=1)

HSP 1 Score: 157.5 bits (397), Expect = 1.4e-37
Identity = 75/138 (54.35%), Postives = 100/138 (72.46%), Query Frame = 0


Query: 24  VDFKIKMVTVGGKKLKLTIWDTAGQERFGTLTSSYYRGAHGIILVYDVTRRETFTNLINV 83
           VDFK+K + + G + KL IWDTAGQERF TLT SYYRGA G+ILVYDVT+R+TFT L N 
Sbjct: 43  VDFKVKTIAIDGNRAKLAIWDTAGQERFRTLTPSYYRGAQGVILVYDVTKRDTFTKLEN- 102

Query: 84  WAKEVELYLTNRECIKILVGNKVDRGSDRAVTTEEGMEVAKKHKSLFLECSARTRENVDR 143
           W  E+E Y T  + +K+LVGNK+D+  +R V   EG++ A+KH  LF+E SA+TR+ V  
Sbjct: 103 WLNELETYCTRNDLVKMLVGNKIDK-DNREVDRNEGLKFARKHSMLFIEASAKTRDGVQC 162

Query: 144 CFKELSSKMMEVPSLLEN 162
            F+EL  K+++ P L E+
Sbjct: 163 AFEELVEKILQTPGLWES 178

[Close]

BLAST of CsGy2G016230 vs. TrEMBL
Match: tr|A0A0A0LN27|A0A0A0LN27_CUCSA (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_2G326500 PE=4 SV=1)

HSP 1 Score: 334.7 bits (857), Expect = 1.3e-88
Identity = 166/166 (100.00%), Postives = 166/166 (100.00%), Query Frame = 0


Query: 24  VDFKIKMVTVGGKKLKLTIWDTAGQERFGTLTSSYYRGAHGIILVYDVTRRETFTNLINV 83
           VDFKIKMVTVGGKKLKLTIWDTAGQERFGTLTSSYYRGAHGIILVYDVTRRETFTNLINV
Sbjct: 50  VDFKIKMVTVGGKKLKLTIWDTAGQERFGTLTSSYYRGAHGIILVYDVTRRETFTNLINV 109

Query: 84  WAKEVELYLTNRECIKILVGNKVDRGSDRAVTTEEGMEVAKKHKSLFLECSARTRENVDR 143
           WAKEVELYLTNRECIKILVGNKVDRGSDRAVTTEEGMEVAKKHKSLFLECSARTRENVDR
Sbjct: 110 WAKEVELYLTNRECIKILVGNKVDRGSDRAVTTEEGMEVAKKHKSLFLECSARTRENVDR 169

Query: 144 CFKELSSKMMEVPSLLENGSVVVKQKILDKTQARKEVEVNDRGCCH 190
           CFKELSSKMMEVPSLLENGSVVVKQKILDKTQARKEVEVNDRGCCH
Sbjct: 170 CFKELSSKMMEVPSLLENGSVVVKQKILDKTQARKEVEVNDRGCCH 215

[Close]

BLAST of CsGy2G016230 vs. TrEMBL
Match: tr|A0A1S3C3K9|A0A1S3C3K9_CUCME (ras-related protein RABC2a-like OS=Cucumis melo OX=3656 GN=LOC103496466 PE=4 SV=1)

HSP 1 Score: 322.0 bits (824), Expect = 8.9e-85
Identity = 155/166 (93.37%), Postives = 165/166 (99.40%), Query Frame = 0


Query: 24  VDFKIKMVTVGGKKLKLTIWDTAGQERFGTLTSSYYRGAHGIILVYDVTRRETFTNLINV 83
           VDFKIKMVTVGGK+LKLTIWDTAGQERFGTLTSSYYRGAHGIILVYDVTRRETFTNLIN+
Sbjct: 50  VDFKIKMVTVGGKRLKLTIWDTAGQERFGTLTSSYYRGAHGIILVYDVTRRETFTNLINI 109

Query: 84  WAKEVELYLTNRECIKILVGNKVDRGSDRAVTTEEGMEVAKKHKSLFLECSARTRENVDR 143
           WAKEVELYLTNRECIKILVGNKVDRGS+RAVTTEEGME+AK+HKSLFLECSARTRENVDR
Sbjct: 110 WAKEVELYLTNRECIKILVGNKVDRGSERAVTTEEGMEIAKEHKSLFLECSARTRENVDR 169

Query: 144 CFKELSSKMMEVPSLLENGSVVVKQKILDKTQARKEVEVNDRGCCH 190
           CF+ELSSK++EVPSLLENGS+VVKQKILDKT+A KEVEVNDRGCCH
Sbjct: 170 CFRELSSKILEVPSLLENGSIVVKQKILDKTRAHKEVEVNDRGCCH 215

[Close]

BLAST of CsGy2G016230 vs. TrEMBL
Match: tr|A0A061FVM1|A0A061FVM1_THECC (Rab gtpase c2a, alpha,atrab,atrab18b,atrabc2a,rabc2a isoform 1 OS=Theobroma cacao OX=3641 GN=TCM_043355 PE=4 SV=1)

HSP 1 Score: 251.9 bits (642), Expect = 1.1e-63
Identity = 125/165 (75.76%), Postives = 141/165 (85.45%), Query Frame = 0


Query: 24  VDFKIKMVTVGGKKLKLTIWDTAGQERFGTLTSSYYRGAHGIILVYDVTRRETFTNLINV 83
           VDFKIKMVTVGGK+LKLTIWDTAGQERFGTLTSSYYRGAHGIILVYDVTRRETFTNL  +
Sbjct: 52  VDFKIKMVTVGGKRLKLTIWDTAGQERFGTLTSSYYRGAHGIILVYDVTRRETFTNLSEI 111

Query: 84  WAKEVELYLTNRECIKILVGNKVDRGSDRAVTTEEGMEVAKKHKSLFLECSARTRENVDR 143
           WAKEVELY TN ECIKILVGNKVDR S+RAVT EEGM +A++HK  FLECSA+TRENV +
Sbjct: 112 WAKEVELYSTNHECIKILVGNKVDRDSERAVTREEGMALAQEHKCSFLECSAKTRENVHQ 171

Query: 144 CFKELSSKMMEVPSLLENGSVVVKQKILDKTQARKEVEVNDRGCC 189
           CFK+L  K++EVP+L E GS VVK++IL + Q  K  + N  GCC
Sbjct: 172 CFKDLILKVLEVPALREKGSAVVKKQILQQKQEHKVPQSN--GCC 214

[Close]

BLAST of CsGy2G016230 vs. TrEMBL
Match: tr|A0A2I4DSM9|A0A2I4DSM9_9ROSI (ras-related protein RABC2a-like isoform X3 OS=Juglans regia OX=51240 GN=LOC108983077 PE=4 SV=1)

HSP 1 Score: 249.2 bits (635), Expect = 7.3e-63
Identity = 118/168 (70.24%), Postives = 148/168 (88.10%), Query Frame = 0


Query: 23  CVDFKIKMVTVGGKKLKLTIWDTAGQERFGTLTSSYYRGAHGIILVYDVTRRETFTNLIN 82
           CVDFK+K +T+GGK+LKLTIWDTAGQERFGT+TSSYYRGAHGIILVYDVTRRETFTNL++
Sbjct: 11  CVDFKVKQLTIGGKRLKLTIWDTAGQERFGTVTSSYYRGAHGIILVYDVTRRETFTNLLD 70

Query: 83  VWAKEVELYLTNRECIKILVGNKVDRGSDRAVTTEEGMEVAKKHKSLFLECSARTRENVD 142
           +WAKEV+LY TN ECIKIL+GNKVDR ++RAVT EEG+ +A++HK LFLECSA+T+ENV 
Sbjct: 71  IWAKEVQLYSTNHECIKILLGNKVDRENERAVTREEGLALAQEHKYLFLECSAKTKENVH 130

Query: 143 RCFKELSSKMMEVPSLLENGSVVVKQKILDKTQARKEVEVNDR--GCC 189
           +CFK+L+ K++EVP+ LENGS VVK++IL+    +K+V+   R  GCC
Sbjct: 131 QCFKDLTLKILEVPNFLENGSTVVKKQILE----QKQVDPTPRGGGCC 174

[Close]

BLAST of CsGy2G016230 vs. TrEMBL
Match: tr|A0A0D2VQU5|A0A0D2VQU5_GOSRA (Uncharacterized protein OS=Gossypium raimondii OX=29730 GN=B456_011G234300 PE=4 SV=1)

HSP 1 Score: 248.4 bits (633), Expect = 1.2e-62
Identity = 124/165 (75.15%), Postives = 140/165 (84.85%), Query Frame = 0


Query: 24  VDFKIKMVTVGGKKLKLTIWDTAGQERFGTLTSSYYRGAHGIILVYDVTRRETFTNLINV 83
           VDFKIKMVT+GGK+LKLTIWDTAGQERFGTLTSSYYRGAHGIILVYDVTRRETFTNL  V
Sbjct: 54  VDFKIKMVTIGGKRLKLTIWDTAGQERFGTLTSSYYRGAHGIILVYDVTRRETFTNLSEV 113

Query: 84  WAKEVELYLTNRECIKILVGNKVDRGSDRAVTTEEGMEVAKKHKSLFLECSARTRENVDR 143
           WAKEVELY TN+ECIK+LVGNKVDR S+RAVT EEGM +A++ K  FLECSARTR NV +
Sbjct: 114 WAKEVELYSTNQECIKVLVGNKVDRDSERAVTQEEGMALAQQLKCSFLECSARTRANVHQ 173

Query: 144 CFKELSSKMMEVPSLLENGSVVVKQKILDKTQARKEVEVNDRGCC 189
           CFK+L  K++EVP+LLE GS  VK++IL + Q RK  E N   CC
Sbjct: 174 CFKDLVLKILEVPTLLEKGSTAVKKQILQQKQVRKPPESNT--CC 216

The following BLAST results are available for this feature:

BLAST of CsGy2G016230 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_004150373.1	2.0e-88	100.00	PREDICTED: ras-related protein RABC2a-like [Cucumis sativus] >KGN62197.1 hypothe...	[more]
XP_008456546.1	1.3e-84	93.37	PREDICTED: ras-related protein RABC2a-like [Cucumis melo]	[more]
XP_022952871.1	9.3e-78	89.70	ras-related protein RABC2a-like [Cucurbita moschata] >XP_022952881.1 ras-related...	[more]
XP_022990456.1	7.9e-77	89.09	ras-related protein RABC2a-like [Cucurbita maxima]	[more]
XP_022133444.1	2.6e-72	81.93	ras-related protein RABC2a-like [Momordica charantia]	[more]

BLAST of CsGy2G016230 vs. TAIR10


Match Name	E-value	Identity	Description
AT5G03530.1	3.3e-61	68.67	RAB GTPase homolog C2A	[more]
AT3G09910.1	4.6e-55	71.23	RAB GTPase homolog C2B	[more]
AT1G43890.1	1.9e-53	60.00	RAB GTPASE HOMOLOG B18	[more]
AT3G11730.1	5.7e-29	40.11	Ras-related small GTP-binding family protein	[more]
AT3G09900.1	7.5e-29	40.59	RAB GTPase homolog E1E	[more]

BLAST of CsGy2G016230 vs. Swiss-Prot


Match Name	E-value	Identity	Description
sp\|O49841\|RAC2A_ARATH	6.0e-60	68.67	Ras-related protein RABC2a OS=Arabidopsis thaliana OX=3702 GN=RABC2A PE=1 SV=1	[more]
sp\|Q9SF92\|RAC2B_ARATH	8.4e-54	71.23	Ras-related protein RABC2b OS=Arabidopsis thaliana OX=3702 GN=RABC2B PE=2 SV=1	[more]
sp\|O23657\|RABC1_ARATH	3.5e-52	60.00	Ras-related protein RABC1 OS=Arabidopsis thaliana OX=3702 GN=RABC1 PE=1 SV=1	[more]
sp\|P36862\|YPTV3_VOLCA	6.4e-38	51.88	GTP-binding protein yptV3 OS=Volvox carteri OX=3067 GN=YPTV3 PE=3 SV=1	[more]
sp\|Q6DHC1\|RB18B_DANRE	1.4e-37	54.35	Ras-related protein Rab-18-B OS=Danio rerio OX=7955 GN=rab18b PE=2 SV=1	[more]

BLAST of CsGy2G016230 vs. TrEMBL


Match Name	E-value	Identity	Description
tr\|A0A0A0LN27\|A0A0A0LN27_CUCSA	1.3e-88	100.00	Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_2G326500 PE=4 SV=1	[more]
tr\|A0A1S3C3K9\|A0A1S3C3K9_CUCME	8.9e-85	93.37	ras-related protein RABC2a-like OS=Cucumis melo OX=3656 GN=LOC103496466 PE=4 SV=...	[more]
tr\|A0A061FVM1\|A0A061FVM1_THECC	1.1e-63	75.76	Rab gtpase c2a, alpha,atrab,atrab18b,atrabc2a,rabc2a isoform 1 OS=Theobroma caca...	[more]
tr\|A0A2I4DSM9\|A0A2I4DSM9_9ROSI	7.3e-63	70.24	ras-related protein RABC2a-like isoform X3 OS=Juglans regia OX=51240 GN=LOC10898...	[more]
tr\|A0A0D2VQU5\|A0A0D2VQU5_GOSRA	1.2e-62	75.15	Uncharacterized protein OS=Gossypium raimondii OX=29730 GN=B456_011G234300 PE=4 ...	[more]

Annotated Terms

The following terms have been associated with this gene:

Vocabulary: **Molecular Function**
Term	Definition
GO:0003924	GTPase activity
GO:0005525	GTP binding

Vocabulary: **INTERPRO**
Term	Definition
IPR027417	P-loop_NTPase
IPR005225	Small_GTP-bd_dom
IPR001806	Small_GTPase

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0008150	biological_process
cellular_component	GO:0005575	cellular_component
molecular_function	GO:0003924	GTPase activity
molecular_function	GO:0005525	GTP binding

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
CsGy2G016230.1	CsGy2G016230.1	mRNA

InterPro

Analysis Name: InterPro Annotations of cucumber Gy14 genome (v2)
Date Performed: 2018-09-25


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
None	No IPR available	PRINTS	PR00449	RASTRNSFRMNG	coord: 31..53 score: 50.88 coord: 130..152 score: 34.38 coord: 95..108 score: 42.24
None	No IPR available	SMART	SM00175	rab_sub_5	coord: 14..155 e-value: 4.8E-55 score: 198.9
None	No IPR available	SMART	SM00173	ras_sub_4	coord: 23..155 e-value: 4.6E-11 score: 40.1
None	No IPR available	SMART	SM00174	rho_sub_3	coord: 18..155 e-value: 8.0E-9 score: -5.7
None	No IPR available	GENE3D	G3DSA:3.40.50.300		coord: 12..161 e-value: 1.6E-45 score: 156.6
None	No IPR available	PANTHER	PTHR24073:SF643	SUBFAMILY NOT NAMED	coord: 23..178
None	No IPR available	PANTHER	PTHR24073	FAMILY NOT NAMED	coord: 23..178
None	No IPR available	PROSITE	PS51419	RAB	coord: 1..188 score: 24.627
IPR001806	Small GTPase superfamily	PFAM	PF00071	Ras	coord: 24..153 e-value: 4.9E-40 score: 136.7
IPR005225	Small GTP-binding protein domain	TIGRFAM	TIGR00231	TIGR00231	coord: 29..148 e-value: 1.1E-19 score: 68.8
IPR027417	P-loop containing nucleoside triphosphate hydrolase	SUPERFAMILY	SSF52540	P-loop containing nucleoside triphosphate hydrolases	coord: 24..188

Synteny

The following gene(s) are orthologous to this gene:


Gene	Orthologue	Organism	Block
CsGy2G016230	Cla013732	Watermelon (97103) v1	cgybwmB111
CsGy2G016230	Csa2G326500	Cucumber (Chinese Long) v2	cgybcuB063
CsGy2G016230	MELO3C019844	Melon (DHL92) v3.5.1	cgybmeB101
CsGy2G016230	ClCG08G007890	Watermelon (Charleston Gray)	cgybwcgB158
CsGy2G016230	CSPI02G16100	Wild cucumber (PI 183967)	cgybcpiB064
CsGy2G016230	CmaCh04G025460	Cucurbita maxima (Rimu)	cgybcmaB245
CsGy2G016230	CmoCh04G026640	Cucurbita moschata (Rifu)	cgybcmoB233
CsGy2G016230	Lsi08G006820	Bottle gourd (USVL1VR-Ls)	cgyblsiB127
CsGy2G016230	Cp4.1LG01g24670	Cucurbita pepo (Zucchini)	cgybcpeB211
CsGy2G016230	MELO3C019844.2	Melon (DHL92) v3.6.1	cgybmedB100
CsGy2G016230	CsaV3_2G021030	Cucumber (Chinese Long) v3	cgybcucB064
CsGy2G016230	Cla97C08G150640	Watermelon (97103) v2	cgybwmbB159
CsGy2G016230	Bhi04G001048	Wax gourd	cgybwgoB153
CsGy2G016230	Carg04590	Silver-seed gourd	carcgybB0682

The following gene(s) are paralogous to this gene:

None

The following block(s) are covering this gene:


Gene	Organism	Block
CsGy2G016230	Cucurbita pepo (Zucchini)	cgybcpeB184
CsGy2G016230	Cucumber (Gy14) v2	cgybcgybB058
CsGy2G016230	Cucurbita maxima (Rimu)	cgybcmaB190
CsGy2G016230	Cucurbita maxima (Rimu)	cgybcmaB219
CsGy2G016230	Cucurbita moschata (Rifu)	cgybcmoB183
CsGy2G016230	Cucurbita moschata (Rifu)	cgybcmoB192
CsGy2G016230	Cucumber (Chinese Long) v2	cgybcuB075
CsGy2G016230	Watermelon (Charleston Gray)	cgybwcgB136
CsGy2G016230	Wild cucumber (PI 183967)	cgybcpiB076