Cp4.1LG01g24670 (gene) Cucurbita pepo (Zucchini)

Overview
NameCp4.1LG01g24670
Typegene
OrganismCucurbita pepo (Cucurbita pepo (Zucchini))
DescriptionRas-related protein Rab-18
LocationCp4.1LG01 : 18799293 .. 18803449 (+)
Genome Viewer
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: five_prime_UTRCDSthree_prime_UTR
Hold the cursor over a type above to highlight its positions in the sequence below.
CGAATGTGGCTCCAACAGATCAAGAACATTGTGTGAGATAAAGAGAAGAGAGAGATGATGAGGTGGGCAGGTAAGAAGTTGTTGAGTGGCAGGAGCATGAAGAACACTTGTTGAGCTTAGGCAATGCCAATCCATTTTCCATGACACCGCTCTCTTGCTTCTAAATTTGTCCCTTCTTTATCATTACTTCATTTCTTTATTTCAACCAAAACCCAGTCAAAATCCAACATGAACAACAACAAAAACCCAAATATTTCATCTAAAAAAACACCCATTTCTTGATTCATTCTCTCTTTCAATAATCCATTCAAATTTCAAACACCCTGTTCTTCATATAAACGTTTGAATCAAATAAAAACCCTCAAAAGCTTGAAAAATTGTGGACAAATTGGAAGAATTTTGAGATGAAATGAGACAAATAATGTTGCAGGCCATAGAATCTACAAAAAGCGGACTCAGCCCATTGAAGGTAAAGGGCAAGTTTGTCCAAACGCTATAATTTACACACGTACACTACCGGCTACTGCCAGCTCCTTCTCTCTGTTACGTTTTCGTTTCTCATAACCTCACCAATTCCATTTCCTTCTTTTGATGGTTTTGATTTCATTCTGTTCTTCTTGTTTATGGAAAAGGGTTTTTGTGAGAGAGAGTTAAAAAGATAGAGAAGAGAAATGATGGGTTCTTCTTCAAAAGCAAGAAGCAGTAGCTATGATTACTCGTTCAAGATACTGTTGATTGGGGATTCTGGCGTTGGGAAAAGCAGTATTCTCCTCAGTTACATATCCAATTTTGTTCAAGATCTGTCTCCCACAATCGGTTTGTTCTATGTCTTTCTCATTATATATGTGCATGTTCTTGTGGATATCATGAAATTGCTACAACCCAGATGCTCTGTTCTGAGTTTTGGTCTTATTTGAATCATCTGAGAAATCTTGATGGTTCTGCTAGTTGGATGAACACATATTGGTTGAATATTTTTGTTTTTTGTTGTTGGTTCTTCTTTGTTCTTAGTCTGCTGATCGTAGTTTTTGGATTGATTTCTGGCGTTTGGAATGTTTTTGAGTTGGGAGTTATATGTTAGAATGGTTTCTCTATCTTCAAGGGATGAAGTGTTGTCGTAGTGGGTAACCGTCGAAGCCCACCGCTAGTGATGTTGGCCGCTTTGGCCTGTTATGTACCGCCGTCAGCCTCATGGCTTTAAAACGTGTCTACATGAGGCTTTACAACGCGTCTACTAGGGAGAGGTTTTCACACCCTTGTAAGGAATGTTTCGTTCAGAGATCTCATAGAGTGAGAGCTACTGGCTTTGAATCAATTTTGTGGCTGAGTAGATTTAGTTTCAAATCATGATTAGTTTAGAACTTTGGAAAGCCACACACACATATATAGAGTTCAACCAGTCTGGATTCGGACCTCTGATTTGTTGGTCGAGGACATATGCTTCACCTAATTGAGCTGTGTGTGTATATATATATATAGAGAGAGAGAGTTCAACAAGTCTGGATTCAAACCTCTGAATTGTTGGTCGAGTACATTGTTTCCCCTAATTGAGCTGTGTGTGTGTGTATATATATAGAGAGAGAGTTCAACAAGTCGGGATTCGAACTTCTGAATTGTTGGGAGAGGACATATGCTTCACCTAATTGAGCTATGTGTGTGTGTGTGTGTGTATATATATATATAGAGAGAGAGAGAGAGCGAGTTCAACAAGTCGGGATTCGGACCTCTGAATTGTTGGTCGAGGACATGTGCTTCACCTAATTGAGCTGTGTGTGTCTTATATGTGTGTGTATATATAGAGAGAGAGAGAGAGTTCAACAAGTCGGGATTCAAACCTCTGAATTGTTGGTCGAGTACATTGCTTCACCTAATTGAGCTATGTGTGTGTGTGTGTGTATATAGAGAGAGAGAGTTCAATAAGTCGGGATTCAAACCTCTGAATTGTTGGTTGAGTACATTGCTTCACCTAATTGAGCTGTGTGTGTGTGTGTGTGTGTATAGAGAGAGGGTTCAACAAGTCGGGATTTGAACCTCTGAATTGTTGGGAGAGGACATATGCTTCACCTAATCGAGTTATGTGTGTGTGTATATATATAGAGAGAGAGTACAACAAGTCGGGATTCGAACCTATGAAGGGTTGGTCGTGGTCATATGCCTCAACTAGTTGATCTATGCTTCCATGAACACTTAGAGAGCCATATTATTCTTTAAAACGAGTCGATTGTACTTGGTGAGGTAGGTGCTCATTGTTAAGGAGTTTGTAGTAGGTTGAAAAGAGGTGTCTGTGGCCAGGCTCCTTATAGTATTGGGTCGGGAATCTTTGGTCTTCTCTTTTGCATTTCTGCTGTCTGCGTTCTTTTTTGTGTCTGTCTGTACCGCAAAAATGGTCGACACCAGCTCTAATGGTTGAAAATAGAGGGCCAACTAAGACCCTGTAATAAAGCTTCGATAAAACAAACGATTCATTCCCACAACTTCAGACCAGGAAGAAACGAAGTTTTTTGAAACATCGGAATGATACATTTAGTCGTTTATATGAATAAATTATTCTAATTCCATTAACTTCTCATTTCGCTCGATTAATTTTCTTTTCATGCATGGCTGCAGGTGTGGATTTCAAGATCAAGATGGTAACAGTTGGTGGAAAAAGATTGAAGCTAACGATTTGGGACACAGGTAACTGGATGATTTACCCGTTCTTCTGGTCTCGTGTTTGCGTTTTTAGCTTGTGCGAGCTGCTCGATACAGAAAGTTTCTTCGTTTTTCTGCTTCGATGCTACGCTTACTCTATGAAGTGTTCGTTCACCCATTTAATATACAATATCTTATCCTTTGTTCTTGTATGCAGCTGGACAGGAGAGGTTTGGAACATTGACAAGCTCTTACTACAGAGGTGCACATGGAATCATCCTAGGTATGACCGAAATTTATCCGTTAAAAAATTCTTTGAAATGATTATTTTTCTAAAAAAAGCGGGAAAATTCCCCTCGGGAACCTCCTTGCCCCGATTCCCACACAAATAAATAGGGAGTTTTGTGGGGATGGGGTTGAAATAGTAGGTGGCGACGTGTCGGTTTTCTACGTTTTATTTTGGGACCTTTCTCTCATGGCACGTTCCGTTGTCACGGTTGAATGTATTGAATTCAGTTTGAACACTTCACGAGGCTGATACTTATGTATGTTTTGCTGATAGTGTACGATGTTACCCGACGGGAGACGTTTACGAACTTGATGGACGTATGGGCAAAGGAAGTAGAGATGTATTTAACCAATCATGAGTGCATAAAAATTCTTGTTGGAAATAAAGTCGATCGAGTAAGTTGTATGATCCTACCGTCGTTCAAACCTCAAACTCTTCATTTTAAGGAATCTTTAATATCGACAGGGTAGCGAAAGAGCTGTTTCGACAGAAGAAGGTATGGCCGTTGCCAAGGAGCATCAAAGTTTGTTTCTCGAGTGCAGTGCTAGAACTCGAGAAAATGTCGATAGATGCTTTAAAGAACTCTCTTCAAAGGTAACGCTCCAACGCTAAGATGCTCGTGTTTTACTTCATTGTGTTGTATTCGAACTAAAAACTCCTCCTAAGAATGGCCACAAGTATTAGTTTAGGAGCTGTAATGCAACGGTTTGCGTACTTACTCGAGCTCGTGATATCTTCTTCATTTCTTTTCGGTGGGGTTAGCTATAAAGCTCAAAACCCAGTCCCCCATGTCGAATGTATTTCATCTCATGATCTAAATCGGTTTATTACATTCCAGATACTGGAAGTTCCGAGTCTACTAGAAAATGGATCTGTCGTGGTGAAACAGAAAATTTTGGACAAAACTCGAGCACGAAAAGAAGCGAACGATGGGGGTTGTTGCCGCTAACCCGACGCAACCCGACGCAACGAATCAGATATGGAAGATCACGAAATTGTTGATTAGAACAGAGGCCAGGAAAGACACAAACGAGGCAACCAAGGTGATTACATTGTTTGTATCAGCTTTTTTCTTTCAAAAGAGAATAAAAAAGAATGCATTGGAATGGTGTCTTTGAGATCACTGTAAAAGTTTTGGGTGAATTTTGTTGGGATAATGACTTTTTGAGTAACAAAATTTAATAAAATCCTTGTAGATAATGTGAATGTATTTTTAATATCATTCACACTTCATCCC

mRNA sequence

CGAATGTGGCTCCAACAGATCAAGAACATTGTGTGAGATAAAGAGAAGAGAGAGATGATGAGGTGGGCAGGTAAGAAGTTGTTGAGTGGCAGGAGCATGAAGAACACTTGTTGAGCTTAGGCAATGCCAATCCATTTTCCATGACACCGCTCTCTTGCTTCTAAATTTGTCCCTTCTTTATCATTACTTCATTTCTTTATTTCAACCAAAACCCAGTCAAAATCCAACATGAACAACAACAAAAACCCAAATATTTCATCTAAAAAAACACCCATTTCTTGATTCATTCTCTCTTTCAATAATCCATTCAAATTTCAAACACCCTGTTCTTCATATAAACGTTTGAATCAAATAAAAACCCTCAAAAGCTTGAAAAATTGTGGACAAATTGGAAGAATTTTGAGATGAAATGAGACAAATAATGTTGCAGGCCATAGAATCTACAAAAAGCGGACTCAGCCCATTGAAGGGTTTTTGTGAGAGAGAGTTAAAAAGATAGAGAAGAGAAATGATGGGTTCTTCTTCAAAAGCAAGAAGCAGTAGCTATGATTACTCGTTCAAGATACTGTTGATTGGGGATTCTGGCGTTGGGAAAAGCAGTATTCTCCTCAGTTACATATCCAATTTTGTTCAAGATCTGTCTCCCACAATCGGTGTGGATTTCAAGATCAAGATGGTAACAGTTGGTGGAAAAAGATTGAAGCTAACGATTTGGGACACAGTGTACGATGTTACCCGACGGGAGACGTTTACGAACTTGATGGACGTATGGGCAAAGGAAGTAGAGATGTATTTAACCAATCATGAGTGCATAAAAATTCTTGTTGGAAATAAAGTCGATCGAGGTAGCGAAAGAGCTGTTTCGACAGAAGAAGGTATGGCCGTTGCCAAGGAGCATCAAAGTTTGTTTCTCGAGTGCAGTGCTAGAACTCGAGAAAATGTCGATAGATGCTTTAAAGAACTCTCTTCAAAGATACTGGAAGTTCCGAGTCTACTAGAAAATGGATCTGTCGTGGTGAAACAGAAAATTTTGGACAAAACTCGAGCACGAAAAGAAGCGAACGATGGGGGTTGTTGCCGCTAACCCGACGCAACCCGACGCAACGAATCAGATATGGAAGATCACGAAATTGTTGATTAGAACAGAGGCCAGGAAAGACACAAACGAGGCAACCAAGGTGATTACATTGTTTGTATCAGCTTTTTTCTTTCAAAAGAGAATAAAAAAGAATGCATTGGAATGGTGTCTTTGAGATCACTGTAAAAGTTTTGGGTGAATTTTGTTGGGATAATGACTTTTTGAGTAACAAAATTTAATAAAATCCTTGTAGATAATGTGAATGTATTTTTAATATCATTCACACTTCATCCC

Coding sequence (CDS)

ATGATGGGTTCTTCTTCAAAAGCAAGAAGCAGTAGCTATGATTACTCGTTCAAGATACTGTTGATTGGGGATTCTGGCGTTGGGAAAAGCAGTATTCTCCTCAGTTACATATCCAATTTTGTTCAAGATCTGTCTCCCACAATCGGTGTGGATTTCAAGATCAAGATGGTAACAGTTGGTGGAAAAAGATTGAAGCTAACGATTTGGGACACAGTGTACGATGTTACCCGACGGGAGACGTTTACGAACTTGATGGACGTATGGGCAAAGGAAGTAGAGATGTATTTAACCAATCATGAGTGCATAAAAATTCTTGTTGGAAATAAAGTCGATCGAGGTAGCGAAAGAGCTGTTTCGACAGAAGAAGGTATGGCCGTTGCCAAGGAGCATCAAAGTTTGTTTCTCGAGTGCAGTGCTAGAACTCGAGAAAATGTCGATAGATGCTTTAAAGAACTCTCTTCAAAGATACTGGAAGTTCCGAGTCTACTAGAAAATGGATCTGTCGTGGTGAAACAGAAAATTTTGGACAAAACTCGAGCACGAAAAGAAGCGAACGATGGGGGTTGTTGCCGCTAA

Protein sequence

MMGSSSKARSSSYDYSFKILLIGDSGVGKSSILLSYISNFVQDLSPTIGVDFKIKMVTVGGKRLKLTIWDTVYDVTRRETFTNLMDVWAKEVEMYLTNHECIKILVGNKVDRGSERAVSTEEGMAVAKEHQSLFLECSARTRENVDRCFKELSSKILEVPSLLENGSVVVKQKILDKTRARKEANDGGCCR
Homology
[Close]
BLAST of Cp4.1LG01g24670 vs. Swiss-Prot
Match: RAC2A_ARATH (Ras-related protein RABC2a OS=Arabidopsis thaliana GN=RABC2A PE=1 SV=1)

HSP 1 Score: 250.0 bits (637), Expect = 2.1e-65
Identity = 132/211 (62.56%), Postives = 157/211 (74.41%), Query Frame = 1 

Query: 2   MGSSSKARSSSYDYSFKILLIGDSGVGKSSILLSYISNFVQDLSPTIGVDFKIKMVTVGG 61
           MGSSS    S YD SFKILLIGDSGVGKSS+L+S+IS+ V+DL+PTIGVDFKIK +TVGG
Sbjct: 1   MGSSSG--QSGYDLSFKILLIGDSGVGKSSLLVSFISSSVEDLAPTIGVDFKIKQLTVGG 60

Query: 62  KRLKLTIWDT----------------------VYDVTRRETFTNLMDVWAKEVEMYLTNH 121
           KRLKLTIWDT                      VYDVTRRETFTNL+DVW KE+E+Y TN 
Sbjct: 61  KRLKLTIWDTAGQERFRTLTSSYYRGAQGIILVYDVTRRETFTNLVDVWGKEIELYSTNQ 120

Query: 122 ECIKILVGNKVDRGSERAVSTEEGMAVAKEHQSLFLECSARTRENVDRCFKELSSKILEV 181
           EC+++LVGNKVDR SER VS EEG+A+AKE   +FLECSARTR+NV++CF+EL+ KI+EV
Sbjct: 121 ECVRMLVGNKVDRESERGVSREEGIALAKELNCMFLECSARTRQNVEQCFEELALKIMEV 180

Query: 182 PSLLENGSVVVKQKILDKTRARKEANDGGCC 191
           PSLLE GS  VK+ IL +    +     GCC
Sbjct: 181 PSLLEEGSSAVKRNILKQKPEHQTNTQSGCC 209

[Close]
BLAST of Cp4.1LG01g24670 vs. Swiss-Prot
Match: RAC2B_ARATH (Ras-related protein RABC2b OS=Arabidopsis thaliana GN=RABC2B PE=2 SV=1)

HSP 1 Score: 236.9 bits (603), Expect = 1.8e-61
Identity = 132/211 (62.56%), Postives = 152/211 (72.04%), Query Frame = 1 

Query: 2   MGSSSKARSSSYDYSFKILLIGDSGVGKSSILLSYISNFVQDLSPTIGVDFKIKMVTVGG 61
           MGSSS    S YD SFKILLIGDSGVGKSS+LLS+IS+ V+DL+PTIGVDFKIK + V G
Sbjct: 1   MGSSSG--QSGYDLSFKILLIGDSGVGKSSLLLSFISSSVEDLAPTIGVDFKIKQMKVRG 60

Query: 62  KRLKLTIWDT----------------------VYDVTRRETFTNLMDVWAKEVEMYLTNH 121
           KRLKLTIWDT                      VYDVT+RETF NL D+WAKE+E+Y TNH
Sbjct: 61  KRLKLTIWDTAGQEKFRTLTSSYFRGSQGIILVYDVTKRETFLNLADIWAKEIELYSTNH 120

Query: 122 ECIKILVGNKVDRGSERAVSTEEGMAVAKEHQSLFLECSARTRENVDRCFKELSSKILEV 181
           +CIK+LVGNKVDR SER VS EEGMA+AK+   LF ECSARTRENV+ CF+EL+ KI+EV
Sbjct: 121 DCIKMLVGNKVDRESERKVSREEGMALAKDLNCLFHECSARTRENVNGCFEELALKIMEV 180

Query: 182 PSLLENGSVVVKQKILDKTRARKEANDGGCC 191
           PSLLE GS  VK+K          A+ G CC
Sbjct: 181 PSLLEEGSSSVKRK------PDYRAHQGRCC 203

[Close]
BLAST of Cp4.1LG01g24670 vs. Swiss-Prot
Match: RABC1_ARATH (Ras-related protein RABC1 OS=Arabidopsis thaliana GN=RABC1 PE=1 SV=1)

HSP 1 Score: 216.5 bits (550), Expect = 2.6e-55
Identity = 116/211 (54.98%), Postives = 144/211 (68.25%), Query Frame = 1 

Query: 2   MGSSSKARSSSYDYSFKILLIGDSGVGKSSILLSYISNFVQDLSPTIGVDFKIKMVTVGG 61
           MGSSS      +DY FK+LLIGDSGVGKSS+LLS+ SN   DLSPTIGVDFK+K +T+G 
Sbjct: 1   MGSSSG--QPEFDYLFKVLLIGDSGVGKSSLLLSFTSNTFDDLSPTIGVDFKVKYLTIGE 60

Query: 62  KRLKLTIWDT----------------------VYDVTRRETFTNLMDVWAKEVEMYLTNH 121
           K+LKL IWDT                      VYDVTRR+TFTNL D+WAKE+++Y TN 
Sbjct: 61  KKLKLAIWDTAGQERFRTLTSSYYRGAQGIIMVYDVTRRDTFTNLSDIWAKEIDLYSTNQ 120

Query: 122 ECIKILVGNKVDRGSERAVSTEEGMAVAKEHQSLFLECSARTRENVDRCFKELSSKILEV 181
           +CIK+LVGNKVD+ SERAVS +EG+  A+E+  LFLECSA+TR NV++CF+EL  KILE 
Sbjct: 121 DCIKMLVGNKVDKESERAVSKKEGIDFAREYGCLFLECSAKTRVNVEQCFEELVLKILET 180

Query: 182 PSLLENGSVVVKQKILDKTRARKEANDGGCC 191
           PSL   GS   K+ I  +  A+  +     C
Sbjct: 181 PSLTAEGSSGGKKNIFKQNPAQTTSTSSSYC 209

[Close]
BLAST of Cp4.1LG01g24670 vs. Swiss-Prot
Match: YPTV3_VOLCA (GTP-binding protein yptV3 OS=Volvox carteri GN=YPTV3 PE=3 SV=1)

HSP 1 Score: 149.4 bits (376), Expect = 3.9e-35
Identity = 85/180 (47.22%), Postives = 110/180 (61.11%), Query Frame = 1 

Query: 12  SYDYSFKILLIGDSGVGKSSILLSYISN-FVQDLSPTIGVDFKIKMVTVGGKRLKLTIWD 71
           S+DY+FK+LL+GDSGVGKS IL  + S  F +  + TIGVDFK+K +T  GKR KLTIWD
Sbjct: 5   SHDYTFKVLLVGDSGVGKSCILTRFTSGIFEESTTSTIGVDFKVKYLTADGKRCKLTIWD 64

Query: 72  T----------------------VYDVTRRETFTNLMDVWAKEVEMYLTNHECIKILVGN 131
           T                      VYDVTRR+TF +L   W +E ++Y T    IK++V N
Sbjct: 65  TAGQERFRTLTSSYYRGAQGIIFVYDVTRRDTFESLEANWMREFDIYSTVESAIKMVVAN 124

Query: 132 KVDRGSERAVSTEEGMAVAKEHQSLFLECSARTRENVDRCFKELSSKILEVPSLLENGSV 169
           KVD  ++R VS+EEG   A+ H  LF+E SAR    V + F+EL  KIL+ P LLE  +V
Sbjct: 125 KVDLSAQRQVSSEEGHDFARRHGCLFVETSARANLAVGQAFEELLLKILDTPLLLETTAV 184

[Close]
BLAST of Cp4.1LG01g24670 vs. Swiss-Prot
Match: RB18B_DANRE (Ras-related protein Rab-18-B OS=Danio rerio GN=rab18b PE=2 SV=1)

HSP 1 Score: 141.4 bits (355), Expect = 1.1e-32
Identity = 82/197 (41.62%), Postives = 116/197 (58.88%), Query Frame = 1 

Query: 16  SFKILLIGDSGVGKSSILLSYISN-FVQDLSPTIGVDFKIKMVTVGGKRLKLTIWDT--- 75
           + KIL+IG+SGVGKSS+LL +  + F  +L+ TIGVDFK+K + + G R KL IWDT   
Sbjct: 8   TLKILIIGESGVGKSSLLLRFTDDTFDPELAATIGVDFKVKTIAIDGNRAKLAIWDTAGQ 67

Query: 76  -------------------VYDVTRRETFTNLMDVWAKEVEMYLTNHECIKILVGNKVDR 135
                              VYDVT+R+TFT L + W  E+E Y T ++ +K+LVGNK+D+
Sbjct: 68  ERFRTLTPSYYRGAQGVILVYDVTKRDTFTKLEN-WLNELETYCTRNDLVKMLVGNKIDK 127

Query: 136 GSERAVSTEEGMAVAKEHQSLFLECSARTRENVDRCFKELSSKILEVPSLLENGSVVVKQ 190
            + R V   EG+  A++H  LF+E SA+TR+ V   F+EL  KIL+ P L E+       
Sbjct: 128 DN-REVDRNEGLKFARKHSMLFIEASAKTRDGVQCAFEELVEKILQTPGLWESSIQNHGV 187

[Close]
BLAST of Cp4.1LG01g24670 vs. TrEMBL
Match: A0A0A0LN27_CUCSA (Uncharacterized protein OS=Cucumis sativus GN=Csa_2G326500 PE=4 SV=1)

HSP 1 Score: 323.2 bits (827), Expect = 2.2e-85
Identity = 171/214 (79.91%), Postives = 182/214 (85.05%), Query Frame = 1 

Query: 1   MMGSSSKARSSSYDYSFKILLIGDSGVGKSSILLSYISNFVQDLSPTIGVDFKIKMVTVG 60
           MMGSSSK R  SYDYSFKILLIGDSGVGKSSILLSYISNFV DLSPTIGVDFKIKMVTVG
Sbjct: 1   MMGSSSKGRCISYDYSFKILLIGDSGVGKSSILLSYISNFVHDLSPTIGVDFKIKMVTVG 60

Query: 61  GKRLKLTIWDT----------------------VYDVTRRETFTNLMDVWAKEVEMYLTN 120
           GK+LKLTIWDT                      VYDVTRRETFTNL++VWAKEVE+YLTN
Sbjct: 61  GKKLKLTIWDTAGQERFGTLTSSYYRGAHGIILVYDVTRRETFTNLINVWAKEVELYLTN 120

Query: 121 HECIKILVGNKVDRGSERAVSTEEGMAVAKEHQSLFLECSARTRENVDRCFKELSSKILE 180
            ECIKILVGNKVDRGS+RAV+TEEGM VAK+H+SLFLECSARTRENVDRCFKELSSK++E
Sbjct: 121 RECIKILVGNKVDRGSDRAVTTEEGMEVAKKHKSLFLECSARTRENVDRCFKELSSKMME 180

Query: 181 VPSLLENGSVVVKQKILDKTRARK--EANDGGCC 191
           VPSLLENGSVVVKQKILDKT+ARK  E ND GCC
Sbjct: 181 VPSLLENGSVVVKQKILDKTQARKEVEVNDRGCC 214

[Close]
BLAST of Cp4.1LG01g24670 vs. TrEMBL
Match: A0A061FNF5_THECC (Rab gtpase c2a, alpha,atrab,atrab18b,atrabc2a,rabc2a isoform 2 OS=Theobroma cacao GN=TCM_043355 PE=4 SV=1)

HSP 1 Score: 285.4 bits (729), Expect = 5.0e-74
Identity = 143/192 (74.48%), Postives = 165/192 (85.94%), Query Frame = 1 

Query: 1   MMGSSSK--ARSSSYDYSFKILLIGDSGVGKSSILLSYISNFVQDLSPTIGVDFKIKMVT 60
           M+GSSS     ++SYDYSFKILLIGDSGVGKSS+L+S+ISNFV DLSPTIGVDFKIKMVT
Sbjct: 1   MLGSSSSKGGGNNSYDYSFKILLIGDSGVGKSSLLVSFISNFVHDLSPTIGVDFKIKMVT 60

Query: 61  VGGKRLKLTIWDTVYDVTRRETFTNLMDVWAKEVEMYLTNHECIKILVGNKVDRGSERAV 120
           VGGKRLKLTIWDTVYDVTRRETFTNL ++WAKEVE+Y TNHECIKILVGNKVDR SERAV
Sbjct: 61  VGGKRLKLTIWDTVYDVTRRETFTNLSEIWAKEVELYSTNHECIKILVGNKVDRDSERAV 120

Query: 121 STEEGMAVAKEHQSLFLECSARTRENVDRCFKELSSKILEVPSLLENGSVVVKQKILDKT 180
           + EEGMA+A+EH+  FLECSA+TRENV +CFK+L  K+LEVP+L E GS VVK++IL + 
Sbjct: 121 TREEGMALAQEHKCSFLECSAKTRENVHQCFKDLILKVLEVPALREKGSAVVKKQILQQK 180

Query: 181 RARKEANDGGCC 191
           +  K     GCC
Sbjct: 181 QEHKVPQSNGCC 192

[Close]
BLAST of Cp4.1LG01g24670 vs. TrEMBL
Match: A0A067K2Q1_JATCU (Uncharacterized protein OS=Jatropha curcas GN=JCGZ_16180 PE=4 SV=1)

HSP 1 Score: 277.7 bits (709), Expect = 1.1e-71
Identity = 147/211 (69.67%), Postives = 163/211 (77.25%), Query Frame = 1 

Query: 2   MGSSSKARSSSYDYSFKILLIGDSGVGKSSILLSYISNFVQDLSPTIGVDFKIKMVTVGG 61
           MGSSSK  ++SYDYSFKILLIGDSGVGKSSILLS+ISN V DLSPTIGVDFKIKM+ VGG
Sbjct: 1   MGSSSKVGNNSYDYSFKILLIGDSGVGKSSILLSFISNSVHDLSPTIGVDFKIKMLNVGG 60

Query: 62  KRLKLTIWDT----------------------VYDVTRRETFTNLMDVWAKEVEMYLTNH 121
           KRLKLTIWDT                      VYDVTRRETFTNL D+WAKEVE+Y TN 
Sbjct: 61  KRLKLTIWDTAGQERFGTLIRSYYRGAHGIILVYDVTRRETFTNLSDMWAKEVELYSTNQ 120

Query: 122 ECIKILVGNKVDRGSERAVSTEEGMAVAKEHQSLFLECSARTRENVDRCFKELSSKILEV 181
           +CIKILVGNKVDR SER VS EEGMA+A EH+  FLECSA+TRENV +CFKEL+ KILEV
Sbjct: 121 DCIKILVGNKVDRDSERVVSREEGMALAAEHKCSFLECSAKTRENVQQCFKELTLKILEV 180

Query: 182 PSLLENGSVVVKQKILDKTRARKEANDGGCC 191
           PSLL+NGSVVVKQ+IL +    +     GCC
Sbjct: 181 PSLLQNGSVVVKQQILKQKPGYQAPRGSGCC 211

[Close]
BLAST of Cp4.1LG01g24670 vs. TrEMBL
Match: A0A061FVM1_THECC (Rab gtpase c2a, alpha,atrab,atrab18b,atrabc2a,rabc2a isoform 1 OS=Theobroma cacao GN=TCM_043355 PE=4 SV=1)

HSP 1 Score: 272.7 bits (696), Expect = 3.4e-70
Identity = 143/214 (66.82%), Postives = 165/214 (77.10%), Query Frame = 1 

Query: 1   MMGSSSK--ARSSSYDYSFKILLIGDSGVGKSSILLSYISNFVQDLSPTIGVDFKIKMVT 60
           M+GSSS     ++SYDYSFKILLIGDSGVGKSS+L+S+ISNFV DLSPTIGVDFKIKMVT
Sbjct: 1   MLGSSSSKGGGNNSYDYSFKILLIGDSGVGKSSLLVSFISNFVHDLSPTIGVDFKIKMVT 60

Query: 61  VGGKRLKLTIWDT----------------------VYDVTRRETFTNLMDVWAKEVEMYL 120
           VGGKRLKLTIWDT                      VYDVTRRETFTNL ++WAKEVE+Y 
Sbjct: 61  VGGKRLKLTIWDTAGQERFGTLTSSYYRGAHGIILVYDVTRRETFTNLSEIWAKEVELYS 120

Query: 121 TNHECIKILVGNKVDRGSERAVSTEEGMAVAKEHQSLFLECSARTRENVDRCFKELSSKI 180
           TNHECIKILVGNKVDR SERAV+ EEGMA+A+EH+  FLECSA+TRENV +CFK+L  K+
Sbjct: 121 TNHECIKILVGNKVDRDSERAVTREEGMALAQEHKCSFLECSAKTRENVHQCFKDLILKV 180

Query: 181 LEVPSLLENGSVVVKQKILDKTRARKEANDGGCC 191
           LEVP+L E GS VVK++IL + +  K     GCC
Sbjct: 181 LEVPALREKGSAVVKKQILQQKQEHKVPQSNGCC 214

[Close]
BLAST of Cp4.1LG01g24670 vs. TrEMBL
Match: A0A0B0PZQ1_GOSAR (Ras-related RABC2a-like protein OS=Gossypium arboreum GN=F383_08692 PE=4 SV=1)

HSP 1 Score: 271.2 bits (692), Expect = 9.8e-70
Identity = 137/194 (70.62%), Postives = 162/194 (83.51%), Query Frame = 1 

Query: 1   MMGSSSKAR----SSSYDYSFKILLIGDSGVGKSSILLSYISNFVQDLSPTIGVDFKIKM 60
           M+GSSS +     +++ DYSFKILLIGDSGVGKSS+L+++ISNFV DLSPTIGVDFKIKM
Sbjct: 1   MLGSSSSSSKGGGNNNCDYSFKILLIGDSGVGKSSLLVTFISNFVHDLSPTIGVDFKIKM 60

Query: 61  VTVGGKRLKLTIWDTVYDVTRRETFTNLMDVWAKEVEMYLTNHECIKILVGNKVDRGSER 120
           VT+GGKRLKLTIWDTVYDVTRRETFTNL +VWAKEVE+Y TN ECIK+LVGNKVDR SER
Sbjct: 61  VTIGGKRLKLTIWDTVYDVTRRETFTNLSEVWAKEVELYSTNQECIKVLVGNKVDRDSER 120

Query: 121 AVSTEEGMAVAKEHQSLFLECSARTRENVDRCFKELSSKILEVPSLLENGSVVVKQKILD 180
           AV+ EEGMA+A++ +  FLECSARTR NV +CFK+L  KILEVP+LLE GS  VK++IL 
Sbjct: 121 AVTQEEGMALAQQLKCSFLECSARTRANVHQCFKDLVLKILEVPTLLEKGSTAVKKQILQ 180

Query: 181 KTRARKEANDGGCC 191
           + + RK      CC
Sbjct: 181 QKQVRKPPESNACC 194

[Close]
BLAST of Cp4.1LG01g24670 vs. TAIR10
Match: AT5G03530.1 (AT5G03530.1 RAB GTPase homolog C2A)

HSP 1 Score: 250.0 bits (637), Expect = 1.2e-66
Identity = 132/211 (62.56%), Postives = 157/211 (74.41%), Query Frame = 1 

Query: 2   MGSSSKARSSSYDYSFKILLIGDSGVGKSSILLSYISNFVQDLSPTIGVDFKIKMVTVGG 61
           MGSSS    S YD SFKILLIGDSGVGKSS+L+S+IS+ V+DL+PTIGVDFKIK +TVGG
Sbjct: 1   MGSSSG--QSGYDLSFKILLIGDSGVGKSSLLVSFISSSVEDLAPTIGVDFKIKQLTVGG 60

Query: 62  KRLKLTIWDT----------------------VYDVTRRETFTNLMDVWAKEVEMYLTNH 121
           KRLKLTIWDT                      VYDVTRRETFTNL+DVW KE+E+Y TN 
Sbjct: 61  KRLKLTIWDTAGQERFRTLTSSYYRGAQGIILVYDVTRRETFTNLVDVWGKEIELYSTNQ 120

Query: 122 ECIKILVGNKVDRGSERAVSTEEGMAVAKEHQSLFLECSARTRENVDRCFKELSSKILEV 181
           EC+++LVGNKVDR SER VS EEG+A+AKE   +FLECSARTR+NV++CF+EL+ KI+EV
Sbjct: 121 ECVRMLVGNKVDRESERGVSREEGIALAKELNCMFLECSARTRQNVEQCFEELALKIMEV 180

Query: 182 PSLLENGSVVVKQKILDKTRARKEANDGGCC 191
           PSLLE GS  VK+ IL +    +     GCC
Sbjct: 181 PSLLEEGSSAVKRNILKQKPEHQTNTQSGCC 209

[Close]
BLAST of Cp4.1LG01g24670 vs. TAIR10
Match: AT3G09910.1 (AT3G09910.1 RAB GTPase homolog C2B)

HSP 1 Score: 236.9 bits (603), Expect = 1.0e-62
Identity = 132/211 (62.56%), Postives = 152/211 (72.04%), Query Frame = 1 

Query: 2   MGSSSKARSSSYDYSFKILLIGDSGVGKSSILLSYISNFVQDLSPTIGVDFKIKMVTVGG 61
           MGSSS    S YD SFKILLIGDSGVGKSS+LLS+IS+ V+DL+PTIGVDFKIK + V G
Sbjct: 1   MGSSSG--QSGYDLSFKILLIGDSGVGKSSLLLSFISSSVEDLAPTIGVDFKIKQMKVRG 60

Query: 62  KRLKLTIWDT----------------------VYDVTRRETFTNLMDVWAKEVEMYLTNH 121
           KRLKLTIWDT                      VYDVT+RETF NL D+WAKE+E+Y TNH
Sbjct: 61  KRLKLTIWDTAGQEKFRTLTSSYFRGSQGIILVYDVTKRETFLNLADIWAKEIELYSTNH 120

Query: 122 ECIKILVGNKVDRGSERAVSTEEGMAVAKEHQSLFLECSARTRENVDRCFKELSSKILEV 181
           +CIK+LVGNKVDR SER VS EEGMA+AK+   LF ECSARTRENV+ CF+EL+ KI+EV
Sbjct: 121 DCIKMLVGNKVDRESERKVSREEGMALAKDLNCLFHECSARTRENVNGCFEELALKIMEV 180

Query: 182 PSLLENGSVVVKQKILDKTRARKEANDGGCC 191
           PSLLE GS  VK+K          A+ G CC
Sbjct: 181 PSLLEEGSSSVKRK------PDYRAHQGRCC 203

[Close]
BLAST of Cp4.1LG01g24670 vs. TAIR10
Match: AT1G43890.1 (AT1G43890.1 RAB GTPASE HOMOLOG B18)

HSP 1 Score: 216.5 bits (550), Expect = 1.5e-56
Identity = 116/211 (54.98%), Postives = 144/211 (68.25%), Query Frame = 1 

Query: 2   MGSSSKARSSSYDYSFKILLIGDSGVGKSSILLSYISNFVQDLSPTIGVDFKIKMVTVGG 61
           MGSSS      +DY FK+LLIGDSGVGKSS+LLS+ SN   DLSPTIGVDFK+K +T+G 
Sbjct: 1   MGSSSG--QPEFDYLFKVLLIGDSGVGKSSLLLSFTSNTFDDLSPTIGVDFKVKYLTIGE 60

Query: 62  KRLKLTIWDT----------------------VYDVTRRETFTNLMDVWAKEVEMYLTNH 121
           K+LKL IWDT                      VYDVTRR+TFTNL D+WAKE+++Y TN 
Sbjct: 61  KKLKLAIWDTAGQERFRTLTSSYYRGAQGIIMVYDVTRRDTFTNLSDIWAKEIDLYSTNQ 120

Query: 122 ECIKILVGNKVDRGSERAVSTEEGMAVAKEHQSLFLECSARTRENVDRCFKELSSKILEV 181
           +CIK+LVGNKVD+ SERAVS +EG+  A+E+  LFLECSA+TR NV++CF+EL  KILE 
Sbjct: 121 DCIKMLVGNKVDKESERAVSKKEGIDFAREYGCLFLECSAKTRVNVEQCFEELVLKILET 180

Query: 182 PSLLENGSVVVKQKILDKTRARKEANDGGCC 191
           PSL   GS   K+ I  +  A+  +     C
Sbjct: 181 PSLTAEGSSGGKKNIFKQNPAQTTSTSSSYC 209

[Close]
BLAST of Cp4.1LG01g24670 vs. TAIR10
Match: AT4G35860.1 (AT4G35860.1 GTP-binding 2)

HSP 1 Score: 127.9 bits (320), Expect = 6.8e-30
Identity = 76/170 (44.71%), Postives = 100/170 (58.82%), Query Frame = 1 

Query: 12  SYDYSFKILLIGDSGVGKSSILLSYISNFVQDLSP-TIGVDFKIKMVTVGGKRLKLTIWD 71
           SYDY FK ++IGD+GVGKS +LL +     Q +   TIGV+F  +MVTV G+ +KL IWD
Sbjct: 2   SYDYLFKYIIIGDTGVGKSCLLLQFTDKRFQPVHDLTIGVEFGARMVTVDGRPIKLQIWD 61

Query: 72  T----------------------VYDVTRRETFTNLMDVWAKEVEMYLTNHECIKILVGN 131
           T                      VYD+TRRETF +L   W ++   +   +  I +L+GN
Sbjct: 62  TAGQESFRSITRSYYRGAAGALLVYDITRRETFNHLAS-WLEDARQHANPNMSI-MLIGN 121

Query: 132 KVDRGSERAVSTEEGMAVAKEHQSLFLECSARTRENVDRCFKELSSKILE 159
           K D   +RAVS EEG   AKEH  LFLE SART +NV+  F E ++KIL+
Sbjct: 122 KCDLAHKRAVSKEEGQQFAKEHGLLFLEASARTAQNVEEAFIETAAKILQ 169

[Close]
BLAST of Cp4.1LG01g24670 vs. TAIR10
Match: AT3G09900.1 (AT3G09900.1 RAB GTPase homolog E1E)

HSP 1 Score: 120.9 bits (302), Expect = 8.3e-28
Identity = 80/218 (36.70%), Postives = 117/218 (53.67%), Query Frame = 1 

Query: 1   MMGSSSKARSSSYDYSFKILLIGDSGVGKSSILLSYISN-FVQDLSPTIGVDFKIKMVTV 60
           M  + ++ARS  YDY  K+LLIGDSGVGKS +LL +  + F      TIG+DFKI+ V +
Sbjct: 1   MAVAPARARSD-YDYLIKLLLIGDSGVGKSCLLLRFSDDTFTTSFITTIGIDFKIRTVEL 60

Query: 61  GGKRLKLTIWDT----------------------VYDVTRRETFTNLMDVWAKEVEMYLT 120
            GKR+KL IWDT                      VYDVT   +F N+ + W K +E + +
Sbjct: 61  DGKRIKLQIWDTAGQERFRTITTAYYRGAMGILLVYDVTDESSFNNIRN-WMKNIEQHAS 120

Query: 121 NHECIKILVGNKVDRG-SERAVSTEEGMAVAKEHQSLFLECSARTRENVDRCF----KEL 180
           +    KILVGNK D   S+RAV T +G A+A E+   F E SA+T +NV++ F    K++
Sbjct: 121 D-SVNKILVGNKADMDESKRAVPTSKGQALADEYGIKFFETSAKTNQNVEQVFLSIAKDI 180

Query: 181 SSKILEVPSLLENGSVVVKQKILDKTRARKEANDGGCC 191
             ++ E  +  E   + + ++  +K  +        CC
Sbjct: 181 KQRLTESDTKAEPQGIKITKQDANKASSSSTNEKSACC 215

[Close]
BLAST of Cp4.1LG01g24670 vs. NCBI nr
Match: gi|659113382|ref|XP_008456546.1| (PREDICTED: ras-related protein RABC2a-like [Cucumis melo])

HSP 1 Score: 326.2 bits (835), Expect = 3.7e-86
Identity = 172/214 (80.37%), Postives = 181/214 (84.58%), Query Frame = 1 

Query: 1   MMGSSSKARSSSYDYSFKILLIGDSGVGKSSILLSYISNFVQDLSPTIGVDFKIKMVTVG 60
           MMGSSSK R  SYDYSFKILLIGDSGVGKSSILLSYISNFV DLSPTIGVDFKIKMVTVG
Sbjct: 1   MMGSSSKGRCISYDYSFKILLIGDSGVGKSSILLSYISNFVHDLSPTIGVDFKIKMVTVG 60

Query: 61  GKRLKLTIWDT----------------------VYDVTRRETFTNLMDVWAKEVEMYLTN 120
           GKRLKLTIWDT                      VYDVTRRETFTNL+++WAKEVE+YLTN
Sbjct: 61  GKRLKLTIWDTAGQERFGTLTSSYYRGAHGIILVYDVTRRETFTNLINIWAKEVELYLTN 120

Query: 121 HECIKILVGNKVDRGSERAVSTEEGMAVAKEHQSLFLECSARTRENVDRCFKELSSKILE 180
            ECIKILVGNKVDRGSERAV+TEEGM +AKEH+SLFLECSARTRENVDRCF+ELSSKILE
Sbjct: 121 RECIKILVGNKVDRGSERAVTTEEGMEIAKEHKSLFLECSARTRENVDRCFRELSSKILE 180

Query: 181 VPSLLENGSVVVKQKILDKTRARK--EANDGGCC 191
           VPSLLENGS+VVKQKILDKTRA K  E ND GCC
Sbjct: 181 VPSLLENGSIVVKQKILDKTRAHKEVEVNDRGCC 214

[Close]
BLAST of Cp4.1LG01g24670 vs. NCBI nr
Match: gi|449465314|ref|XP_004150373.1| (PREDICTED: ras-related protein RABC2a-like [Cucumis sativus])

HSP 1 Score: 323.2 bits (827), Expect = 3.1e-85
Identity = 171/214 (79.91%), Postives = 182/214 (85.05%), Query Frame = 1 

Query: 1   MMGSSSKARSSSYDYSFKILLIGDSGVGKSSILLSYISNFVQDLSPTIGVDFKIKMVTVG 60
           MMGSSSK R  SYDYSFKILLIGDSGVGKSSILLSYISNFV DLSPTIGVDFKIKMVTVG
Sbjct: 1   MMGSSSKGRCISYDYSFKILLIGDSGVGKSSILLSYISNFVHDLSPTIGVDFKIKMVTVG 60

Query: 61  GKRLKLTIWDT----------------------VYDVTRRETFTNLMDVWAKEVEMYLTN 120
           GK+LKLTIWDT                      VYDVTRRETFTNL++VWAKEVE+YLTN
Sbjct: 61  GKKLKLTIWDTAGQERFGTLTSSYYRGAHGIILVYDVTRRETFTNLINVWAKEVELYLTN 120

Query: 121 HECIKILVGNKVDRGSERAVSTEEGMAVAKEHQSLFLECSARTRENVDRCFKELSSKILE 180
            ECIKILVGNKVDRGS+RAV+TEEGM VAK+H+SLFLECSARTRENVDRCFKELSSK++E
Sbjct: 121 RECIKILVGNKVDRGSDRAVTTEEGMEVAKKHKSLFLECSARTRENVDRCFKELSSKMME 180

Query: 181 VPSLLENGSVVVKQKILDKTRARK--EANDGGCC 191
           VPSLLENGSVVVKQKILDKT+ARK  E ND GCC
Sbjct: 181 VPSLLENGSVVVKQKILDKTQARKEVEVNDRGCC 214

[Close]
BLAST of Cp4.1LG01g24670 vs. NCBI nr
Match: gi|590565780|ref|XP_007010045.1| (Rab gtpase c2a, alpha,atrab,atrab18b,atrabc2a,rabc2a isoform 2 [Theobroma cacao])

HSP 1 Score: 285.4 bits (729), Expect = 7.2e-74
Identity = 143/192 (74.48%), Postives = 165/192 (85.94%), Query Frame = 1 

Query: 1   MMGSSSK--ARSSSYDYSFKILLIGDSGVGKSSILLSYISNFVQDLSPTIGVDFKIKMVT 60
           M+GSSS     ++SYDYSFKILLIGDSGVGKSS+L+S+ISNFV DLSPTIGVDFKIKMVT
Sbjct: 1   MLGSSSSKGGGNNSYDYSFKILLIGDSGVGKSSLLVSFISNFVHDLSPTIGVDFKIKMVT 60

Query: 61  VGGKRLKLTIWDTVYDVTRRETFTNLMDVWAKEVEMYLTNHECIKILVGNKVDRGSERAV 120
           VGGKRLKLTIWDTVYDVTRRETFTNL ++WAKEVE+Y TNHECIKILVGNKVDR SERAV
Sbjct: 61  VGGKRLKLTIWDTVYDVTRRETFTNLSEIWAKEVELYSTNHECIKILVGNKVDRDSERAV 120

Query: 121 STEEGMAVAKEHQSLFLECSARTRENVDRCFKELSSKILEVPSLLENGSVVVKQKILDKT 180
           + EEGMA+A+EH+  FLECSA+TRENV +CFK+L  K+LEVP+L E GS VVK++IL + 
Sbjct: 121 TREEGMALAQEHKCSFLECSAKTRENVHQCFKDLILKVLEVPALREKGSAVVKKQILQQK 180

Query: 181 RARKEANDGGCC 191
           +  K     GCC
Sbjct: 181 QEHKVPQSNGCC 192

[Close]
BLAST of Cp4.1LG01g24670 vs. NCBI nr
Match: gi|802661426|ref|XP_012080999.1| (PREDICTED: ras-related protein RABC2a-like isoform X2 [Jatropha curcas])

HSP 1 Score: 279.3 bits (713), Expect = 5.2e-72
Identity = 148/212 (69.81%), Postives = 164/212 (77.36%), Query Frame = 1 

Query: 1   MMGSSSKARSSSYDYSFKILLIGDSGVGKSSILLSYISNFVQDLSPTIGVDFKIKMVTVG 60
           MMGSSSK  ++SYDYSFKILLIGDSGVGKSSILLS+ISN V DLSPTIGVDFKIKM+ VG
Sbjct: 1   MMGSSSKVGNNSYDYSFKILLIGDSGVGKSSILLSFISNSVHDLSPTIGVDFKIKMLNVG 60

Query: 61  GKRLKLTIWDT----------------------VYDVTRRETFTNLMDVWAKEVEMYLTN 120
           GKRLKLTIWDT                      VYDVTRRETFTNL D+WAKEVE+Y TN
Sbjct: 61  GKRLKLTIWDTAGQERFGTLIRSYYRGAHGIILVYDVTRRETFTNLSDMWAKEVELYSTN 120

Query: 121 HECIKILVGNKVDRGSERAVSTEEGMAVAKEHQSLFLECSARTRENVDRCFKELSSKILE 180
            +CIKILVGNKVDR SER VS EEGMA+A EH+  FLECSA+TRENV +CFKEL+ KILE
Sbjct: 121 QDCIKILVGNKVDRDSERVVSREEGMALAAEHKCSFLECSAKTRENVQQCFKELTLKILE 180

Query: 181 VPSLLENGSVVVKQKILDKTRARKEANDGGCC 191
           VPSLL+NGSVVVKQ+IL +    +     GCC
Sbjct: 181 VPSLLQNGSVVVKQQILKQKPGYQAPRGSGCC 212

[Close]
BLAST of Cp4.1LG01g24670 vs. NCBI nr
Match: gi|643719826|gb|KDP30501.1| (hypothetical protein JCGZ_16180 [Jatropha curcas])

HSP 1 Score: 277.7 bits (709), Expect = 1.5e-71
Identity = 147/211 (69.67%), Postives = 163/211 (77.25%), Query Frame = 1 

Query: 2   MGSSSKARSSSYDYSFKILLIGDSGVGKSSILLSYISNFVQDLSPTIGVDFKIKMVTVGG 61
           MGSSSK  ++SYDYSFKILLIGDSGVGKSSILLS+ISN V DLSPTIGVDFKIKM+ VGG
Sbjct: 1   MGSSSKVGNNSYDYSFKILLIGDSGVGKSSILLSFISNSVHDLSPTIGVDFKIKMLNVGG 60

Query: 62  KRLKLTIWDT----------------------VYDVTRRETFTNLMDVWAKEVEMYLTNH 121
           KRLKLTIWDT                      VYDVTRRETFTNL D+WAKEVE+Y TN 
Sbjct: 61  KRLKLTIWDTAGQERFGTLIRSYYRGAHGIILVYDVTRRETFTNLSDMWAKEVELYSTNQ 120

Query: 122 ECIKILVGNKVDRGSERAVSTEEGMAVAKEHQSLFLECSARTRENVDRCFKELSSKILEV 181
           +CIKILVGNKVDR SER VS EEGMA+A EH+  FLECSA+TRENV +CFKEL+ KILEV
Sbjct: 121 DCIKILVGNKVDRDSERVVSREEGMALAAEHKCSFLECSAKTRENVQQCFKELTLKILEV 180

Query: 182 PSLLENGSVVVKQKILDKTRARKEANDGGCC 191
           PSLL+NGSVVVKQ+IL +    +     GCC
Sbjct: 181 PSLLQNGSVVVKQQILKQKPGYQAPRGSGCC 211

The following BLAST results are available for this feature:
BLAST of Cp4.1LG01g24670 vs. Swiss-Prot
Match NameE-valueIdentityDescription
RAC2A_ARATH2.1e-6562.56Ras-related protein RABC2a OS=Arabidopsis thaliana GN=RABC2A PE=1 SV=1[more]
RAC2B_ARATH1.8e-6162.56Ras-related protein RABC2b OS=Arabidopsis thaliana GN=RABC2B PE=2 SV=1[more]
RABC1_ARATH2.6e-5554.98Ras-related protein RABC1 OS=Arabidopsis thaliana GN=RABC1 PE=1 SV=1[more]
YPTV3_VOLCA3.9e-3547.22GTP-binding protein yptV3 OS=Volvox carteri GN=YPTV3 PE=3 SV=1[more]
RB18B_DANRE1.1e-3241.62Ras-related protein Rab-18-B OS=Danio rerio GN=rab18b PE=2 SV=1[more]
BLAST of Cp4.1LG01g24670 vs. TrEMBL
Match NameE-valueIdentityDescription
A0A0A0LN27_CUCSA2.2e-8579.91Uncharacterized protein OS=Cucumis sativus GN=Csa_2G326500 PE=4 SV=1[more]
A0A061FNF5_THECC5.0e-7474.48Rab gtpase c2a, alpha,atrab,atrab18b,atrabc2a,rabc2a isoform 2 OS=Theobroma caca... [more]
A0A067K2Q1_JATCU1.1e-7169.67Uncharacterized protein OS=Jatropha curcas GN=JCGZ_16180 PE=4 SV=1[more]
A0A061FVM1_THECC3.4e-7066.82Rab gtpase c2a, alpha,atrab,atrab18b,atrabc2a,rabc2a isoform 1 OS=Theobroma caca... [more]
A0A0B0PZQ1_GOSAR9.8e-7070.62Ras-related RABC2a-like protein OS=Gossypium arboreum GN=F383_08692 PE=4 SV=1[more]
BLAST of Cp4.1LG01g24670 vs. TAIR10
Match NameE-valueIdentityDescription
AT5G03530.11.2e-6662.56 RAB GTPase homolog C2A[more]
AT3G09910.11.0e-6262.56 RAB GTPase homolog C2B[more]
AT1G43890.11.5e-5654.98 RAB GTPASE HOMOLOG B18[more]
AT4G35860.16.8e-3044.71 GTP-binding 2[more]
AT3G09900.18.3e-2836.70 RAB GTPase homolog E1E[more]
BLAST of Cp4.1LG01g24670 vs. NCBI nr
Match NameE-valueIdentityDescription
gi|659113382|ref|XP_008456546.1|3.7e-8680.37PREDICTED: ras-related protein RABC2a-like [Cucumis melo][more]
gi|449465314|ref|XP_004150373.1|3.1e-8579.91PREDICTED: ras-related protein RABC2a-like [Cucumis sativus][more]
gi|590565780|ref|XP_007010045.1|7.2e-7474.48Rab gtpase c2a, alpha,atrab,atrab18b,atrabc2a,rabc2a isoform 2 [Theobroma cacao][more]
gi|802661426|ref|XP_012080999.1|5.2e-7269.81PREDICTED: ras-related protein RABC2a-like isoform X2 [Jatropha curcas][more]
gi|643719826|gb|KDP30501.1|1.5e-7169.67hypothetical protein JCGZ_16180 [Jatropha curcas][more]
Annotated Terms
The following terms have been associated with this gene:
Vocabulary: Biological Process
TermDefinition
GO:0007264small GTPase mediated signal transduction
Vocabulary: Molecular Function
TermDefinition
GO:0005525GTP binding
Vocabulary: INTERPRO
TermDefinition
IPR027417P-loop_NTPase
IPR001806Small_GTPase
GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
Category Term Accession Term Name
biological_process GO:0006886 intracellular protein transport
biological_process GO:0008152 metabolic process
biological_process GO:0006913 nucleocytoplasmic transport
biological_process GO:0007264 small GTPase mediated signal transduction
biological_process GO:0008150 biological_process
cellular_component GO:0005622 intracellular
cellular_component GO:0016020 membrane
cellular_component GO:0005575 cellular_component
molecular_function GO:0003924 GTPase activity
molecular_function GO:0005525 GTP binding
Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
Cp4.1LG01g24670.1Cp4.1LG01g24670.1mRNA


InterPro
Analysis Name: InterPro Annotations of Cucurbita pepo
Date Performed: 2017-12-02
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR001806Small GTPase superfamilyPFAMPF00071Rascoord: 18..71
score: 5.7E-15coord: 72..157
score: 9.4
IPR027417P-loop containing nucleoside triphosphate hydrolaseGENE3DG3DSA:3.40.50.300coord: 9..71
score: 2.6E-20coord: 72..190
score: 8.0
IPR027417P-loop containing nucleoside triphosphate hydrolaseunknownSSF52540P-loop containing nucleoside triphosphate hydrolasescoord: 12..168
score: 6.46
NoneNo IPR availablePRINTSPR00449RASTRNSFRMNGcoord: 17..38
score: 2.4E-17coord: 39..55
score: 2.4E-17coord: 57..79
score: 2.4
NoneNo IPR availablePANTHERPTHR24073FAMILY NOT NAMEDcoord: 9..190
score: 5.2
NoneNo IPR availablePANTHERPTHR24073:SF536RAS-RELATED PROTEIN RABC2Acoord: 9..190
score: 5.2
NoneNo IPR availableSMARTSM00173ras_sub_4coord: 14..159
score: 2.4
NoneNo IPR availableSMARTSM00174rho_sub_3coord: 19..159
score: 4.
NoneNo IPR availableSMARTSM00175rab_sub_5coord: 17..159
score: 8.6
NoneNo IPR availablePROFILEPS51419RABcoord: 12..190
score: 19

Synteny
The following gene(s) are orthologous to this gene:
GeneOrthologueOrganismBlock
Cp4.1LG01g24670Cucsa.186160Cucumber (Gy14) v1cgycpeB0518
Cp4.1LG01g24670CmaCh04G025460Cucurbita maxima (Rimu)cmacpeB721
Cp4.1LG01g24670CmoCh04G026640Cucurbita moschata (Rifu)cmocpeB673
Cp4.1LG01g24670Cla013732Watermelon (97103) v1cpewmB395
Cp4.1LG01g24670Csa2G326500Cucumber (Chinese Long) v2cpecuB387
Cp4.1LG01g24670MELO3C019844Melon (DHL92) v3.5.1cpemeB396
Cp4.1LG01g24670ClCG08G007890Watermelon (Charleston Gray)cpewcgB417
Cp4.1LG01g24670CSPI02G16100Wild cucumber (PI 183967)cpecpiB387
Cp4.1LG01g24670Lsi08G006820Bottle gourd (USVL1VR-Ls)cpelsiB382
Cp4.1LG01g24670MELO3C019844.2Melon (DHL92) v3.6.1cpemedB461
Cp4.1LG01g24670CsaV3_2G021030Cucumber (Chinese Long) v3cpecucB0479
Cp4.1LG01g24670Bhi04G001048Wax gourdcpewgoB0527
Cp4.1LG01g24670CsGy2G016230Cucumber (Gy14) v2cgybcpeB211
Cp4.1LG01g24670Carg04590Silver-seed gourdcarcpeB0965
The following gene(s) are paralogous to this gene:
GeneParalogueOrganismBlock
Cp4.1LG01g24670Cp4.1LG08g10660Cucurbita pepo (Zucchini)cpecpeB407
The following block(s) are covering this gene:
GeneOrganismBlock
Cp4.1LG01g24670Cucumber (Chinese Long) v3cpecucB0527
Cp4.1LG01g24670Wax gourdcpewgoB0560
Cp4.1LG01g24670Cucurbita pepo (Zucchini)cpecpeB038
Cp4.1LG01g24670Cucurbita pepo (Zucchini)cpecpeB199
Cp4.1LG01g24670Cucurbita pepo (Zucchini)cpecpeB207
Cp4.1LG01g24670Cucurbita pepo (Zucchini)cpecpeB379
Cp4.1LG01g24670Cucurbita pepo (Zucchini)cpecpeB384
Cp4.1LG01g24670Cucumber (Gy14) v1cgycpeB0807
Cp4.1LG01g24670Cucurbita maxima (Rimu)cmacpeB309
Cp4.1LG01g24670Cucurbita maxima (Rimu)cmacpeB435
Cp4.1LG01g24670Cucurbita maxima (Rimu)cmacpeB734
Cp4.1LG01g24670Cucurbita moschata (Rifu)cmocpeB272
Cp4.1LG01g24670Cucurbita moschata (Rifu)cmocpeB401
Cp4.1LG01g24670Cucurbita moschata (Rifu)cmocpeB687
Cp4.1LG01g24670Wild cucumber (PI 183967)cpecpiB425
Cp4.1LG01g24670Cucumber (Chinese Long) v2cpecuB427
Cp4.1LG01g24670Bottle gourd (USVL1VR-Ls)cpelsiB324
Cp4.1LG01g24670Bottle gourd (USVL1VR-Ls)cpelsiB365
Cp4.1LG01g24670Watermelon (Charleston Gray)cpewcgB398
Cp4.1LG01g24670Watermelon (97103) v1cpewmB438
Cp4.1LG01g24670Melon (DHL92) v3.5.1cpemeB385
Cp4.1LG01g24670Cucumber (Gy14) v2cgybcpeB635
Cp4.1LG01g24670Melon (DHL92) v3.6.1cpemedB446
Cp4.1LG01g24670Silver-seed gourdcarcpeB0367
Cp4.1LG01g24670Silver-seed gourdcarcpeB0679
Cp4.1LG01g24670Silver-seed gourdcarcpeB1158
Cp4.1LG01g24670Silver-seed gourdcarcpeB1176