CsGy2G014560 (gene) Cucumber (Gy14) v2 | Cucurbit Genomics Database (CuGenDB)

Overview


Name	CsGy2G014560
Type	gene
Organism	Cucumis sativus (Cucumber (Gy14) v2)
Description	Uncharacterized protein
Location	Chr2 : 14678264 .. 14678639 (-)

Genome Viewer

Gene Expression

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: CDSexon

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGGAAGTTATCCTAACAACCAAGGTATGTATGTATATTTTCAAATCTATAGTTTTGAAAAAATTAGTGTCTGATCAACAAGTTGTGCTTGGTATTATTGTTTTTGTAGGAAGGAGAATGCATAATTGGAGGTACTGAAGAAGGAGATGAAATTAAATGTGGAATTAGTCTTTACCCAATGGAATTTTACAAAGCTTTCACATCAAAAGGAGTTTGGTTGTTATTCAATTCATATGATCCCAATGGCATGCTTTTGATTGCTCCTATGGGATTGTATACTCACATTTCTTCATTTTCTCCTCATGATATCTATGGAGGAATTGACCTCCATATTGTTAATATATCATCACTACATTTTTCTTTTCCACATCAATAA

mRNA sequence

ATGGAAGTTATCCTAACAACCAAGGAAGGAGAATGCATAATTGGAGGTACTGAAGAAGGAGATGAAATTAAATGTGGAATTAGTCTTTACCCAATGGAATTTTACAAAGCTTTCACATCAAAAGGAGTTTGGTTGTTATTCAATTCATATGATCCCAATGGCATGCTTTTGATTGCTCCTATGGGATTGTATACTCACATTTCTTCATTTTCTCCTCATGATATCTATGGAGGAATTGACCTCCATATTGTTAATATATCATCACTACATTTTTCTTTTCCACATCAATAA

Coding sequence (CDS)

ATGGAAGTTATCCTAACAACCAAGGAAGGAGAATGCATAATTGGAGGTACTGAAGAAGGAGATGAAATTAAATGTGGAATTAGTCTTTACCCAATGGAATTTTACAAAGCTTTCACATCAAAAGGAGTTTGGTTGTTATTCAATTCATATGATCCCAATGGCATGCTTTTGATTGCTCCTATGGGATTGTATACTCACATTTCTTCATTTTCTCCTCATGATATCTATGGAGGAATTGACCTCCATATTGTTAATATATCATCACTACATTTTTCTTTTCCACATCAATAA

Protein sequence

MEVILTTKEGECIIGGTEEGDEIKCGISLYPMEFYKAFTSKGVWLLFNSYDPNGMLLIAPMGLYTHISSFSPHDIYGGIDLHIVNISSLHFSFPHQ

Homology

[Close]

BLAST of CsGy2G014560 vs. NCBI nr
Match: KGN62036.1 (hypothetical protein Csa_2G287180 [Cucumis sativus])

HSP 1 Score: 205.7 bits (522), Expect = 7.1e-50
Identity = 96/96 (100.00%), Postives = 96/96 (100.00%), Query Frame = 0


Query: 1  MEVILTTKEGECIIGGTEEGDEIKCGISLYPMEFYKAFTSKGVWLLFNSYDPNGMLLIAP 60
          MEVILTTKEGECIIGGTEEGDEIKCGISLYPMEFYKAFTSKGVWLLFNSYDPNGMLLIAP
Sbjct: 1  MEVILTTKEGECIIGGTEEGDEIKCGISLYPMEFYKAFTSKGVWLLFNSYDPNGMLLIAP 60

Query: 61 MGLYTHISSFSPHDIYGGIDLHIVNISSLHFSFPHQ 97
          MGLYTHISSFSPHDIYGGIDLHIVNISSLHFSFPHQ
Sbjct: 61 MGLYTHISSFSPHDIYGGIDLHIVNISSLHFSFPHQ 96

[Close]

BLAST of CsGy2G014560 vs. NCBI nr
Match: KGN62033.1 (hypothetical protein Csa_2G287150 [Cucumis sativus])

HSP 1 Score: 121.3 bits (303), Expect = 1.8e-24
Identity = 58/77 (75.32%), Postives = 64/77 (83.12%), Query Frame = 0


Query: 2   EVILTTKEGECIIGGTEEGDEIKCGISLYPMEFYKAFTSKGVWLLFNSYDPNGMLLIAPM 61
           E   TT+EG+CIIGG EEG+EIKCGISLYPMEFYKAFTSK VW  F+S D NG+LLIAPM
Sbjct: 59  ETSFTTQEGKCIIGGIEEGEEIKCGISLYPMEFYKAFTSKRVW-FFSSCDTNGLLLIAPM 118

Query: 62  GLYTHISSFSPHDIYGG 79
           G+YTHISSF P DI  G
Sbjct: 119 GVYTHISSFFPQDIPNG 134

[Close]

BLAST of CsGy2G014560 vs. NCBI nr
Match: XP_008457793.2 (PREDICTED: uncharacterized protein LOC103497397 [Cucumis melo])

HSP 1 Score: 119.4 bits (298), Expect = 6.7e-24
Identity = 57/74 (77.03%), Postives = 62/74 (83.78%), Query Frame = 0


Query: 2   EVILTTKEGECIIGGTEEGDEIKCGISLYPMEFYKAFTSKGVWLLFNSYDPNGMLLIAPM 61
           E   TTKEGECIIGG EEG EIKCGISLYPM+FYKAFTSK VW  F+S D NG+LLIAPM
Sbjct: 254 ETSFTTKEGECIIGGIEEGQEIKCGISLYPMKFYKAFTSKRVW-FFSSCDTNGLLLIAPM 313

Query: 62  GLYTHISSFSPHDI 76
           G+YTHISSF P +I
Sbjct: 314 GVYTHISSFFPQEI 326

[Close]

BLAST of CsGy2G014560 vs. NCBI nr
Match: KGN62032.1 (hypothetical protein Csa_2G287140 [Cucumis sativus])

HSP 1 Score: 117.9 bits (294), Expect = 2.0e-23
Identity = 56/74 (75.68%), Postives = 59/74 (79.73%), Query Frame = 0


Query: 2   EVILTTKEGECIIGGTEEGDEIKCGISLYPMEFYKAFTSKGVWLLFNSYDPNGMLLIAPM 61
           E   T KEGECIIGG EEGDEI CGIS YPMEFYK FTSK VW  F+S D NG+LLIAPM
Sbjct: 58  ETSFTAKEGECIIGGIEEGDEINCGISFYPMEFYKGFTSKRVW-FFSSCDTNGLLLIAPM 117

Query: 62  GLYTHISSFSPHDI 76
           G+YTHISSF P DI
Sbjct: 118 GVYTHISSFFPQDI 130

[Close]

BLAST of CsGy2G014560 vs. NCBI nr
Match: XP_022971718.1 (uncharacterized protein LOC111470385 [Cucurbita maxima])

HSP 1 Score: 96.3 bits (238), Expect = 6.1e-17
Identity = 45/76 (59.21%), Postives = 54/76 (71.05%), Query Frame = 0


Query: 1   MEVILTTKEGECIIGGTEEGDEIKCGISLYPMEFYKAFTSKGVWLLFNSYDPNGMLLIAP 60
           +EV+LTT+  ECIIGG   GDE +  + L P EF+  FTS+ +W LF SYDP GM LIAP
Sbjct: 174 LEVVLTTQRNECIIGGFAAGDEFESAMCLCPWEFFYNFTSERLW-LFKSYDPKGMTLIAP 233

Query: 61  MGLYTHISSFSPHDIY 77
           MGLY HISS+ P D Y
Sbjct: 234 MGLYVHISSYFPEDFY 248

[Close]

BLAST of CsGy2G014560 vs. TrEMBL
Match: tr|A0A0A0LQ10|A0A0A0LQ10_CUCSA (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_2G287180 PE=4 SV=1)

HSP 1 Score: 205.7 bits (522), Expect = 4.7e-50
Identity = 96/96 (100.00%), Postives = 96/96 (100.00%), Query Frame = 0


Query: 1  MEVILTTKEGECIIGGTEEGDEIKCGISLYPMEFYKAFTSKGVWLLFNSYDPNGMLLIAP 60
          MEVILTTKEGECIIGGTEEGDEIKCGISLYPMEFYKAFTSKGVWLLFNSYDPNGMLLIAP
Sbjct: 1  MEVILTTKEGECIIGGTEEGDEIKCGISLYPMEFYKAFTSKGVWLLFNSYDPNGMLLIAP 60

Query: 61 MGLYTHISSFSPHDIYGGIDLHIVNISSLHFSFPHQ 97
          MGLYTHISSFSPHDIYGGIDLHIVNISSLHFSFPHQ
Sbjct: 61 MGLYTHISSFSPHDIYGGIDLHIVNISSLHFSFPHQ 96

[Close]

BLAST of CsGy2G014560 vs. TrEMBL
Match: tr|A0A0A0LJU4|A0A0A0LJU4_CUCSA (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_2G287150 PE=4 SV=1)

HSP 1 Score: 121.3 bits (303), Expect = 1.2e-24
Identity = 58/77 (75.32%), Postives = 64/77 (83.12%), Query Frame = 0


Query: 2   EVILTTKEGECIIGGTEEGDEIKCGISLYPMEFYKAFTSKGVWLLFNSYDPNGMLLIAPM 61
           E   TT+EG+CIIGG EEG+EIKCGISLYPMEFYKAFTSK VW  F+S D NG+LLIAPM
Sbjct: 59  ETSFTTQEGKCIIGGIEEGEEIKCGISLYPMEFYKAFTSKRVW-FFSSCDTNGLLLIAPM 118

Query: 62  GLYTHISSFSPHDIYGG 79
           G+YTHISSF P DI  G
Sbjct: 119 GVYTHISSFFPQDIPNG 134

[Close]

BLAST of CsGy2G014560 vs. TrEMBL
Match: tr|A0A1S3C6G9|A0A1S3C6G9_CUCME (uncharacterized protein LOC103497397 OS=Cucumis melo OX=3656 GN=LOC103497397 PE=4 SV=1)

HSP 1 Score: 119.4 bits (298), Expect = 4.4e-24
Identity = 57/74 (77.03%), Postives = 62/74 (83.78%), Query Frame = 0


Query: 2   EVILTTKEGECIIGGTEEGDEIKCGISLYPMEFYKAFTSKGVWLLFNSYDPNGMLLIAPM 61
           E   TTKEGECIIGG EEG EIKCGISLYPM+FYKAFTSK VW  F+S D NG+LLIAPM
Sbjct: 254 ETSFTTKEGECIIGGIEEGQEIKCGISLYPMKFYKAFTSKRVW-FFSSCDTNGLLLIAPM 313

Query: 62  GLYTHISSFSPHDI 76
           G+YTHISSF P +I
Sbjct: 314 GVYTHISSFFPQEI 326

[Close]

BLAST of CsGy2G014560 vs. TrEMBL
Match: tr|A0A0A0LMQ7|A0A0A0LMQ7_CUCSA (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_2G287140 PE=4 SV=1)

HSP 1 Score: 117.9 bits (294), Expect = 1.3e-23
Identity = 56/74 (75.68%), Postives = 59/74 (79.73%), Query Frame = 0


Query: 2   EVILTTKEGECIIGGTEEGDEIKCGISLYPMEFYKAFTSKGVWLLFNSYDPNGMLLIAPM 61
           E   T KEGECIIGG EEGDEI CGIS YPMEFYK FTSK VW  F+S D NG+LLIAPM
Sbjct: 58  ETSFTAKEGECIIGGIEEGDEINCGISFYPMEFYKGFTSKRVW-FFSSCDTNGLLLIAPM 117

Query: 62  GLYTHISSFSPHDI 76
           G+YTHISSF P DI
Sbjct: 118 GVYTHISSFFPQDI 130

[Close]

BLAST of CsGy2G014560 vs. TrEMBL
Match: tr|A0A1S4E1P6|A0A1S4E1P6_CUCME (uncharacterized protein LOC103497437 OS=Cucumis melo OX=3656 GN=LOC103497437 PE=4 SV=1)

HSP 1 Score: 76.3 bits (186), Expect = 4.3e-11
Identity = 37/71 (52.11%), Postives = 48/71 (67.61%), Query Frame = 0


Query: 2   EVILTTKEGECIIGGTEEGDEIKCGISLYPMEFYKAFTSKGVWLLFNSYDPNGMLLIAPM 61
           E+I T +   CIIGG  EG+E +  + L P+E Y  FTSK +W LF SYDP G+ L+AP 
Sbjct: 177 EIIFTNERDGCIIGGIREGEEWRGAMCLNPIEGYFNFTSKRLW-LFESYDPIGVTLVAPF 236

Query: 62  GLYTHISSFSP 73
           GLY +IS+F P
Sbjct: 237 GLYVNISTFFP 246

The following BLAST results are available for this feature:

BLAST of CsGy2G014560 vs. NCBI nr


Match Name	E-value	Identity	Description
KGN62036.1	7.1e-50	100.00	hypothetical protein Csa_2G287180 [Cucumis sativus]	[more]
KGN62033.1	1.8e-24	75.32	hypothetical protein Csa_2G287150 [Cucumis sativus]	[more]
XP_008457793.2	6.7e-24	77.03	PREDICTED: uncharacterized protein LOC103497397 [Cucumis melo]	[more]
KGN62032.1	2.0e-23	75.68	hypothetical protein Csa_2G287140 [Cucumis sativus]	[more]
XP_022971718.1	6.1e-17	59.21	uncharacterized protein LOC111470385 [Cucurbita maxima]	[more]

BLAST of CsGy2G014560 vs. TAIR10


Match Name	E-value	Identity	Description

BLAST of CsGy2G014560 vs. Swiss-Prot


Match Name	E-value	Identity	Description

BLAST of CsGy2G014560 vs. TrEMBL


Match Name	E-value	Identity	Description
tr\|A0A0A0LQ10\|A0A0A0LQ10_CUCSA	4.7e-50	100.00	Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_2G287180 PE=4 SV=1	[more]
tr\|A0A0A0LJU4\|A0A0A0LJU4_CUCSA	1.2e-24	75.32	Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_2G287150 PE=4 SV=1	[more]
tr\|A0A1S3C6G9\|A0A1S3C6G9_CUCME	4.4e-24	77.03	uncharacterized protein LOC103497397 OS=Cucumis melo OX=3656 GN=LOC103497397 PE=...	[more]
tr\|A0A0A0LMQ7\|A0A0A0LMQ7_CUCSA	1.3e-23	75.68	Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_2G287140 PE=4 SV=1	[more]
tr\|A0A1S4E1P6\|A0A1S4E1P6_CUCME	4.3e-11	52.11	uncharacterized protein LOC103497437 OS=Cucumis melo OX=3656 GN=LOC103497437 PE=...	[more]

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0008150	biological_process
cellular_component	GO:0005575	cellular_component
molecular_function	GO:0003674	molecular_function

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
CsGy2G014560.1	CsGy2G014560.1	mRNA

Synteny

The following gene(s) are orthologous to this gene:


Gene	Orthologue	Organism	Block
CsGy2G014560	Cla020168	Watermelon (97103) v1	cgybwmB139
CsGy2G014560	ClCG02G013010	Watermelon (Charleston Gray)	cgybwcgB118
CsGy2G014560	CsaV3_2G017100	Cucumber (Chinese Long) v3	cgybcucB068
CsGy2G014560	Cla97C02G038680	Watermelon (97103) v2	cgybwmbB113

The following gene(s) are paralogous to this gene:

None

The following block(s) are covering this gene:


Gene	Organism	Block
CsGy2G014560	Cucurbita maxima (Rimu)	cgybcmaB219
CsGy2G014560	Cucurbita maxima (Rimu)	cgybcmaB225
CsGy2G014560	Cucurbita moschata (Rifu)	cgybcmoB210
CsGy2G014560	Cucurbita moschata (Rifu)	cgybcmoB217
CsGy2G014560	Cucurbita pepo (Zucchini)	cgybcpeB194
CsGy2G014560	Cucurbita pepo (Zucchini)	cgybcpeB250
CsGy2G014560	Cucumber (Chinese Long) v2	cgybcuB056
CsGy2G014560	Bottle gourd (USVL1VR-Ls)	cgyblsiB086
CsGy2G014560	Melon (DHL92) v3.5.1	cgybmeB085
CsGy2G014560	Melon (DHL92) v3.6.1	cgybmedB079
CsGy2G014560	Watermelon (Charleston Gray)	cgybwcgB115
CsGy2G014560	Watermelon (97103) v1	cgybwmB133
CsGy2G014560	Wild cucumber (PI 183967)	cgybcpiB056
CsGy2G014560	Silver-seed gourd	carcgybB0979
CsGy2G014560	Silver-seed gourd	carcgybB1039
CsGy2G014560	Cucumber (Chinese Long) v3	cgybcucB064
CsGy2G014560	Watermelon (97103) v2	cgybwmbB110
CsGy2G014560	Wax gourd	cgybwgoB169
CsGy2G014560	Wax gourd	cgybwgoB174