ClCG02G013010 (gene) Watermelon (Charleston Gray)

NameClCG02G013010
Typegene
OrganismCitrullus lanatus (Watermelon (Charleston Gray))
DescriptionUnknown protein
LocationCG_Chr02 : 26796386 .. 26797485 (-)
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: CDS
Hold the cursor over a type above to highlight its positions in the sequence below.
ATGGTATTGGTGGAGCTTGACCCTATCGAACCTCTTGCAAATGCAGTCTCCATTCTTCGTAGACTTTCTGAGAAATGCTATTTCAAATGGTCTCCAACAGCATTCTCCATAATAGTCTCCCAAGATAGGCCTCCTTGCATTTCAACTTTCAAAATGATGTCTCTATTCTTCACTCGTTTTTATTGTCCACAAATTCACTATGTCAAATTTGCTATTGTTGATTTCTTTGTTATCATGTTTTATCTCCAACGCATGGGAGTTTCTTCACTTACTTTCTCTATGCCATACGACCTAACTAATATCACTATTCAATATCGCTTTCCTTGTAAGTAATCATTTTTAATTAATATTACAATCTTGCCTTTCTTTCTTTCTTTCTTTCTTTCTTTCTTTCTTTCTTTCTTTTGGGTTATTCTTGGCTATCTTTATTCAACCATTGATGTCCTTGGTTTTTAGGCCAAGAAAATCTAACCACTAAAGTGCTACCAACATCTATGGTTCGAGATCATAAGAGGGTTGGCCGAATTGACTATGGTTCATTCTTTGTCTCCATTGCTTTAGAGGAGTTTCGATGTGTTGTAAAAGACTTGAACAATATTGGTTATGGTAAATATCAATTTATAATAACTTATATAACATTGATTTCTTGAAAGGAAAAGAAAAGAGGGGTTTCTTATGTGTTGTCATATTTGTGGCAGCTCCTATTACCATTACAAGTTCACAAATCAAATTCGCCGTTATAATTGAACATTTCGAAGTTACTCTAACAACCGAGGTATATTTATTTTCTTTTAATTTCATAACATACATTAAAGTTAAAAAATTTAGGGTATGAACAAGTTGTTTGGTACATTATTGTTATTATTATTATTATTATTATTTTTTTATTGTAGGAAGGAGATTGCATAATTGGAGGTATTAAGGAAGGAGATGAAATTGAATGCGGATTTAGTCTTTATCCAATGGAATTCTACCGTGGTTTCACATCGAAAAGAGTATGGTTATTCAAAGCATATGGTCCCGATGGTTTGATGTTGATTGCTCCTATGGGAATGTATACTCATATTTCTTCATTTTTTCCCGATGATTACTATGATTGA

mRNA sequence

ATGGTATTGGTGGAGCTTGACCCTATCGAACCTCTTGCAAATGCAGTCTCCATTCTTCGTAGACTTTCTGAGAAATGCTATTTCAAATGGTCTCCAACAGCATTCTCCATAATAGTCTCCCAAGATAGGCCTCCTTGCATTTCAACTTTCAAAATGATGTCTCTATTCTTCACTCGTTTTTATTGTCCACAAATTCACTATGTCAAATTTGCTATTGTTGATTTCTTTGTTATCATGTTTTATCTCCAACGCATGGGAGTTTCTTCACTTACTTTCTCTATGCCATACGACCTAACTAATATCACTATTCAATATCGCTTTCCTTGCCAAGAAAATCTAACCACTAAAGTGCTACCAACATCTATGGTTCGAGATCATAAGAGGGTTGGCCGAATTGACTATGGTTCATTCTTTGTCTCCATTGCTTTAGAGGAGTTTCGATGTGTTGTAAAAGACTTGAACAATATTGGTTATGCTCCTATTACCATTACAAGTTCACAAATCAAATTCGCCGTTATAATTGAACATTTCGAAGTTACTCTAACAACCGAGGAAGGAGATTGCATAATTGGAGGTATTAAGGAAGGAGATGAAATTGAATGCGGATTTAGTCTTTATCCAATGGAATTCTACCGTGGTTTCACATCGAAAAGAGTATGGTTATTCAAAGCATATGGTCCCGATGGTTTGATGTTGATTGCTCCTATGGGAATGTATACTCATATTTCTTCATTTTTTCCCGATGATTACTATGATTGA

Coding sequence (CDS)

ATGGTATTGGTGGAGCTTGACCCTATCGAACCTCTTGCAAATGCAGTCTCCATTCTTCGTAGACTTTCTGAGAAATGCTATTTCAAATGGTCTCCAACAGCATTCTCCATAATAGTCTCCCAAGATAGGCCTCCTTGCATTTCAACTTTCAAAATGATGTCTCTATTCTTCACTCGTTTTTATTGTCCACAAATTCACTATGTCAAATTTGCTATTGTTGATTTCTTTGTTATCATGTTTTATCTCCAACGCATGGGAGTTTCTTCACTTACTTTCTCTATGCCATACGACCTAACTAATATCACTATTCAATATCGCTTTCCTTGCCAAGAAAATCTAACCACTAAAGTGCTACCAACATCTATGGTTCGAGATCATAAGAGGGTTGGCCGAATTGACTATGGTTCATTCTTTGTCTCCATTGCTTTAGAGGAGTTTCGATGTGTTGTAAAAGACTTGAACAATATTGGTTATGCTCCTATTACCATTACAAGTTCACAAATCAAATTCGCCGTTATAATTGAACATTTCGAAGTTACTCTAACAACCGAGGAAGGAGATTGCATAATTGGAGGTATTAAGGAAGGAGATGAAATTGAATGCGGATTTAGTCTTTATCCAATGGAATTCTACCGTGGTTTCACATCGAAAAGAGTATGGTTATTCAAAGCATATGGTCCCGATGGTTTGATGTTGATTGCTCCTATGGGAATGTATACTCATATTTCTTCATTTTTTCCCGATGATTACTATGATTGA

Protein sequence

MVLVELDPIEPLANAVSILRRLSEKCYFKWSPTAFSIIVSQDRPPCISTFKMMSLFFTRFYCPQIHYVKFAIVDFFVIMFYLQRMGVSSLTFSMPYDLTNITIQYRFPCQENLTTKVLPTSMVRDHKRVGRIDYGSFFVSIALEEFRCVVKDLNNIGYAPITITSSQIKFAVIIEHFEVTLTTEEGDCIIGGIKEGDEIECGFSLYPMEFYRGFTSKRVWLFKAYGPDGLMLIAPMGMYTHISSFFPDDYYD
BLAST of ClCG02G013010 vs. TrEMBL
Match: A0A0A0LJU4_CUCSA (Uncharacterized protein OS=Cucumis sativus GN=Csa_2G287150 PE=4 SV=1)

HSP 1 Score: 187.2 bits (474), Expect = 2.5e-44
Identity = 85/129 (65.89%), Postives = 105/129 (81.40%), Query Frame = 1

Query: 121 SMVRDHKRVGRIDYGSFFVSIALEEFRCVVKDLNNIGYAPITITSSQIKFAVIIEHFEVT 180
           S+V +   VG +DYGSFFVS+ALEEFRCVV+D+ N  Y  +TITSSQIKF   ++H+E +
Sbjct: 2   SIVEEPAEVGDVDYGSFFVSMALEEFRCVVQDMENADYVRVTITSSQIKFVAPVDHWETS 61

Query: 181 LTTEEGDCIIGGIKEGDEIECGFSLYPMEFYRGFTSKRVWLFKAYGPDGLMLIAPMGMYT 240
            TT+EG CIIGGI+EG+EI+CG SLYPMEFY+ FTSKRVW F +   +GL+LIAPMG+YT
Sbjct: 62  FTTQEGKCIIGGIEEGEEIKCGISLYPMEFYKAFTSKRVWFFSSCDTNGLLLIAPMGVYT 121

Query: 241 HISSFFPDD 250
           HISSFFP D
Sbjct: 122 HISSFFPQD 130

BLAST of ClCG02G013010 vs. TrEMBL
Match: A0A0A0LMQ7_CUCSA (Uncharacterized protein OS=Cucumis sativus GN=Csa_2G287140 PE=4 SV=1)

HSP 1 Score: 179.5 bits (454), Expect = 5.1e-42
Identity = 83/129 (64.34%), Postives = 103/129 (79.84%), Query Frame = 1

Query: 121 SMVRDHKRVGRIDYGSFFVSIALEEFRCVVKDLNNIGYAPITITSSQIKFAVIIEHFEVT 180
           S+V +H  VG +DYGSFFVS+AL++FRCVV+D+ +  Y PITI SSQI F V+   +E +
Sbjct: 2   SIVEEHANVGDVDYGSFFVSMALDDFRCVVQDMEDSDYVPITIRSSQINF-VVDHDWETS 61

Query: 181 LTTEEGDCIIGGIKEGDEIECGFSLYPMEFYRGFTSKRVWLFKAYGPDGLMLIAPMGMYT 240
            T +EG+CIIGGI+EGDEI CG S YPMEFY+GFTSKRVW F +   +GL+LIAPMG+YT
Sbjct: 62  FTAKEGECIIGGIEEGDEINCGISFYPMEFYKGFTSKRVWFFSSCDTNGLLLIAPMGVYT 121

Query: 241 HISSFFPDD 250
           HISSFFP D
Sbjct: 122 HISSFFPQD 129

BLAST of ClCG02G013010 vs. TrEMBL
Match: A0A0A0LQ10_CUCSA (Uncharacterized protein OS=Cucumis sativus GN=Csa_2G287180 PE=4 SV=1)

HSP 1 Score: 118.6 bits (296), Expect = 1.1e-23
Identity = 54/75 (72.00%), Postives = 64/75 (85.33%), Query Frame = 1

Query: 178 EVTLTTEEGDCIIGGIKEGDEIECGFSLYPMEFYRGFTSKRVW-LFKAYGPDGLMLIAPM 237
           EV LTT+EG+CIIGG +EGDEI+CG SLYPMEFY+ FTSK VW LF +Y P+G++LIAPM
Sbjct: 2   EVILTTKEGECIIGGTEEGDEIKCGISLYPMEFYKAFTSKGVWLLFNSYDPNGMLLIAPM 61

Query: 238 GMYTHISSFFPDDYY 252
           G+YTHISSF P D Y
Sbjct: 62  GLYTHISSFSPHDIY 76

BLAST of ClCG02G013010 vs. TrEMBL
Match: A0A0A0K7E0_CUCSA (Uncharacterized protein OS=Cucumis sativus GN=Csa_6G002300 PE=4 SV=1)

HSP 1 Score: 102.4 bits (254), Expect = 8.0e-19
Identity = 74/248 (29.84%), Postives = 123/248 (49.60%), Query Frame = 1

Query: 3   LVELDPIEPLANAVSILRRLSEKCYFKWSPTAFSIIVSQDRPPCISTFKMMSLFFTRFYC 62
           +  L+ ++P  +A+ IL R  E    + SP+ FS+IV          F+MM  FF  F+ 
Sbjct: 1   MFSLENLDPFLDAIYILSRFGENANIECSPSMFSLIVPHHNLELNVAFQMMPQFFNYFFS 60

Query: 63  PQIHYVKFAIVDFFVIMFYLQRMGVSSLTFSMPYDLTNITIQYRFPCQE-NLTTKVLPTS 122
            + H  K  I   F  +  ++   ++SL+F +   L  + +++  P  E  L  K     
Sbjct: 61  NRTHSSKIPIQPLFNTIKRMKEYQITSLSFFVLKLLDRLVLKFSSPRNELPLIRKFRMRC 120

Query: 123 MVRDHKRVGRIDYGSFFVSIALEEFRCVVKDLNNIGYAPITITSSQIKFAVIIEHFEVTL 182
            V++   +G ID  +F VSI  ++FR VV    +  +  +T T S ++F+  I+ F    
Sbjct: 121 AVKED--MGNIDLETF-VSIDSQQFRRVVTGCRDY-FVRVTTTHSHVRFSNEIKEF--IF 180

Query: 183 TTEEGDCIIGGIKEGDEIECGFSLYPME-FYR-GFTSKRVWLFKAYGPDGLMLIAPMGMY 242
             E G+CI+ G+ +G   E    +YP   FY   F +KRVWLFK+    G  ++AP+G++
Sbjct: 181 AREGGECIMEGVGKGKGTEFLIPIYPTHVFYNITFRAKRVWLFKSIDKLGTFIVAPVGLF 240

Query: 243 THISSFFP 248
                +FP
Sbjct: 241 ARFVIYFP 242

BLAST of ClCG02G013010 vs. TrEMBL
Match: A0A0A0K9W8_CUCSA (Uncharacterized protein OS=Cucumis sativus GN=Csa_6G002330 PE=4 SV=1)

HSP 1 Score: 97.4 bits (241), Expect = 2.6e-17
Identity = 66/252 (26.19%), Postives = 127/252 (50.40%), Query Frame = 1

Query: 1   MVLVELDPIEPLANAVSILRRLSEKCYFKWSPTAFSIIVSQDRPPCISTFKMMSLFFTRF 60
           M+   ++P+  L N   +L  L E+   + SP   S+++    P  I+  +M   FF  +
Sbjct: 3   MLKFRVNPLSGLLNPTPVLSHLGEEVDIRVSPLKLSLMLPNFSPSFIAGLQMTHEFFNLY 62

Query: 61  YCPQIHYVKFAIVDFFVIMFYLQRMGVSSLTFSMPYDL---TNITIQYRFPCQENLTTKV 120
              + +  +F++  F+  M+ ++  G SS+ F++         +T +     +E    K+
Sbjct: 63  ISDRTYQFRFSLRKFYTFMYRMELQGFSSMLFTVDMKRLLSVYLTFENNNAKRERRRLKL 122

Query: 121 LPTSMVRDHKRVGRIDYGSFFVSIALEEFRCVVKDLNNIGYAPITITSSQIKFAVIIEHF 180
           L   +  D    G I+Y +F VSI   +FR +  +LN+   + +T T+S++ F    ++ 
Sbjct: 123 LAYDLDLD----GDIEYTTF-VSIDSRDFRRIASELNSRSVS-VTFTNSRVNF--FNKNK 182

Query: 181 EVTLTTEEGDCIIGGIKEGDEIECGFSLYPMEFYRGFT--SKRVWLFKAYGPDGLMLIAP 240
           E+T + EE  C+IGG++EG+E     +++P+ F+   +  SKRVW F        ++I P
Sbjct: 183 EITFSKEENQCVIGGVEEGEEFRFIITVHPLVFFLDLSSQSKRVW-FLMQRDFSCIMILP 242

Query: 241 MGMYTHISSFFP 248
           +G++     +FP
Sbjct: 243 LGLWQQFWVYFP 245

BLAST of ClCG02G013010 vs. NCBI nr
Match: gi|700206914|gb|KGN62033.1| (hypothetical protein Csa_2G287150 [Cucumis sativus])

HSP 1 Score: 187.2 bits (474), Expect = 3.5e-44
Identity = 85/129 (65.89%), Postives = 105/129 (81.40%), Query Frame = 1

Query: 121 SMVRDHKRVGRIDYGSFFVSIALEEFRCVVKDLNNIGYAPITITSSQIKFAVIIEHFEVT 180
           S+V +   VG +DYGSFFVS+ALEEFRCVV+D+ N  Y  +TITSSQIKF   ++H+E +
Sbjct: 2   SIVEEPAEVGDVDYGSFFVSMALEEFRCVVQDMENADYVRVTITSSQIKFVAPVDHWETS 61

Query: 181 LTTEEGDCIIGGIKEGDEIECGFSLYPMEFYRGFTSKRVWLFKAYGPDGLMLIAPMGMYT 240
            TT+EG CIIGGI+EG+EI+CG SLYPMEFY+ FTSKRVW F +   +GL+LIAPMG+YT
Sbjct: 62  FTTQEGKCIIGGIEEGEEIKCGISLYPMEFYKAFTSKRVWFFSSCDTNGLLLIAPMGVYT 121

Query: 241 HISSFFPDD 250
           HISSFFP D
Sbjct: 122 HISSFFPQD 130

BLAST of ClCG02G013010 vs. NCBI nr
Match: gi|659116192|ref|XP_008457954.1| (PREDICTED: uncharacterized protein LOC103497518 [Cucumis melo])

HSP 1 Score: 186.8 bits (473), Expect = 4.6e-44
Identity = 84/129 (65.12%), Postives = 106/129 (82.17%), Query Frame = 1

Query: 121 SMVRDHKRVGRIDYGSFFVSIALEEFRCVVKDLNNIGYAPITITSSQIKFAVIIEHFEVT 180
           S+V +   VG +DYGSFFVS+ALEEFRCVV D+ N  Y P+TITSS+IKF  +I+H+E +
Sbjct: 2   SIVAEPVDVGDVDYGSFFVSMALEEFRCVVNDMENAAYVPVTITSSRIKFVALIDHWETS 61

Query: 181 LTTEEGDCIIGGIKEGDEIECGFSLYPMEFYRGFTSKRVWLFKAYGPDGLMLIAPMGMYT 240
            TT+EG+CIIGGI+EG EI+CG SLYPM+FY+ FTSKRVW F +   +GL+LIAPMG+YT
Sbjct: 62  FTTKEGECIIGGIEEGQEIKCGISLYPMKFYKAFTSKRVWFFSSCDTNGLLLIAPMGVYT 121

Query: 241 HISSFFPDD 250
           HISSFFP +
Sbjct: 122 HISSFFPQE 130

BLAST of ClCG02G013010 vs. NCBI nr
Match: gi|700206913|gb|KGN62032.1| (hypothetical protein Csa_2G287140 [Cucumis sativus])

HSP 1 Score: 179.5 bits (454), Expect = 7.4e-42
Identity = 83/129 (64.34%), Postives = 103/129 (79.84%), Query Frame = 1

Query: 121 SMVRDHKRVGRIDYGSFFVSIALEEFRCVVKDLNNIGYAPITITSSQIKFAVIIEHFEVT 180
           S+V +H  VG +DYGSFFVS+AL++FRCVV+D+ +  Y PITI SSQI F V+   +E +
Sbjct: 2   SIVEEHANVGDVDYGSFFVSMALDDFRCVVQDMEDSDYVPITIRSSQINF-VVDHDWETS 61

Query: 181 LTTEEGDCIIGGIKEGDEIECGFSLYPMEFYRGFTSKRVWLFKAYGPDGLMLIAPMGMYT 240
            T +EG+CIIGGI+EGDEI CG S YPMEFY+GFTSKRVW F +   +GL+LIAPMG+YT
Sbjct: 62  FTAKEGECIIGGIEEGDEINCGISFYPMEFYKGFTSKRVWFFSSCDTNGLLLIAPMGVYT 121

Query: 241 HISSFFPDD 250
           HISSFFP D
Sbjct: 122 HISSFFPQD 129

BLAST of ClCG02G013010 vs. NCBI nr
Match: gi|700206917|gb|KGN62036.1| (hypothetical protein Csa_2G287180 [Cucumis sativus])

HSP 1 Score: 118.6 bits (296), Expect = 1.5e-23
Identity = 54/75 (72.00%), Postives = 64/75 (85.33%), Query Frame = 1

Query: 178 EVTLTTEEGDCIIGGIKEGDEIECGFSLYPMEFYRGFTSKRVW-LFKAYGPDGLMLIAPM 237
           EV LTT+EG+CIIGG +EGDEI+CG SLYPMEFY+ FTSK VW LF +Y P+G++LIAPM
Sbjct: 2   EVILTTKEGECIIGGTEEGDEIKCGISLYPMEFYKAFTSKGVWLLFNSYDPNGMLLIAPM 61

Query: 238 GMYTHISSFFPDDYY 252
           G+YTHISSF P D Y
Sbjct: 62  GLYTHISSFSPHDIY 76

BLAST of ClCG02G013010 vs. NCBI nr
Match: gi|659115894|ref|XP_008457793.1| (PREDICTED: uncharacterized protein LOC103497397 [Cucumis melo])

HSP 1 Score: 115.5 bits (288), Expect = 1.3e-22
Identity = 75/213 (35.21%), Postives = 118/213 (55.40%), Query Frame = 1

Query: 49  TFKMMSLFFTRFYCPQIHYVKFAIVDFFVIMFYLQRMGVSSLT--------FSMPYDLTN 108
           T  M+   FTR+ C +  YV+F+I +F+      +R G  SLT        F M  +  +
Sbjct: 3   TLTMLPESFTRYSCDRNIYVQFSIGEFYSKFMLHKRRGYDSLTLICLAEFRFHMALEFHS 62

Query: 109 ITIQYRFPCQENLTTKVLPTSMVR-DHKRVGRIDYGSFFVSIALEEFRCVVKDLNNIG-Y 168
            +IQ      ++ + ++L T   R   + +G+I+Y SF VS  L +FR +V   N+   Y
Sbjct: 63  SSIQ------QSPSPQLLHTWQQRCSFQLMGKINYKSF-VSFKLYDFRRLVVIFNDTRTY 122

Query: 169 APITITSSQIKFAVIIEHFEVTLTTEEGDCIIGGIKEGDEIECGFSLYPMEFYRGFTSKR 228
            P  ++ S+ KF   I+  +   +TE  +CIIGGI++G E++   +L P E Y   TSKR
Sbjct: 123 IPFRVSKSEFKF--FIDDRQFVFSTERNECIIGGIRKGKEMKGAMTLSPKEAYFNCTSKR 182

Query: 229 VWLFKAYGPDGLMLIAPMGMYTHISSFFPDDYY 252
           +WLF++  P G+ L+AP G+Y +IS FFP  +Y
Sbjct: 183 LWLFESNDPSGITLVAPFGLYANISIFFPHFFY 206

The following BLAST results are available for this feature:
Match NameE-valueIdentityDescription
A0A0A0LJU4_CUCSA2.5e-4465.89Uncharacterized protein OS=Cucumis sativus GN=Csa_2G287150 PE=4 SV=1[more]
A0A0A0LMQ7_CUCSA5.1e-4264.34Uncharacterized protein OS=Cucumis sativus GN=Csa_2G287140 PE=4 SV=1[more]
A0A0A0LQ10_CUCSA1.1e-2372.00Uncharacterized protein OS=Cucumis sativus GN=Csa_2G287180 PE=4 SV=1[more]
A0A0A0K7E0_CUCSA8.0e-1929.84Uncharacterized protein OS=Cucumis sativus GN=Csa_6G002300 PE=4 SV=1[more]
A0A0A0K9W8_CUCSA2.6e-1726.19Uncharacterized protein OS=Cucumis sativus GN=Csa_6G002330 PE=4 SV=1[more]
Match NameE-valueIdentityDescription
gi|700206914|gb|KGN62033.1|3.5e-4465.89hypothetical protein Csa_2G287150 [Cucumis sativus][more]
gi|659116192|ref|XP_008457954.1|4.6e-4465.12PREDICTED: uncharacterized protein LOC103497518 [Cucumis melo][more]
gi|700206913|gb|KGN62032.1|7.4e-4264.34hypothetical protein Csa_2G287140 [Cucumis sativus][more]
gi|700206917|gb|KGN62036.1|1.5e-2372.00hypothetical protein Csa_2G287180 [Cucumis sativus][more]
gi|659115894|ref|XP_008457793.1|1.3e-2235.21PREDICTED: uncharacterized protein LOC103497397 [Cucumis melo][more]
The following terms have been associated with this gene:
Vocabulary: INTERPRO
TermDefinition
GO Assignments
This gene is annotated with the following GO terms.
Category Term Accession Term Name
biological_process GO:0008150 biological_process
cellular_component GO:0005575 cellular_component
molecular_function GO:0003674 molecular_function

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
ClCG02G013010.1ClCG02G013010.1mRNA


Analysis Name: InterPro Annotations of watermelon (Charleston Gray)
Date Performed: 2016-09-28
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableGENE3DG3DSA:3.70.10.10coord: 5..184
score: 5.

The following gene(s) are paralogous to this gene:

None