CsGy2G014460 (gene) Cucumber (Gy14) v2

Overview
NameCsGy2G014460
Typegene
OrganismCucumis sativus (Cucumber (Gy14) v2)
DescriptionUncharacterized protein
LocationChr2 : 14656553 .. 14656958 (-)
Genome Viewer
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: five_prime_UTRexonCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
AAAAAAACAAAATATTTAAAAGTTCTAAATTTCTCAAATCCCAATCAAAAGTCTCAAGAACTCAAACACATATAAAGAAAAGGTAATGAAACAAAAAAAGAACAAATGCCTTGTTAGTTATTCATATTTATTTTGTGTTAATTATCAACTTGAATCTTAGGGTTTGCTAATAACAATAATTTTATTGCTATTCTCTAATTTGTCAGATACAATGGATTATTCTTCAAATGGTTTCGCCATTGGAAAAGTAACTTCAAAGCAACAAAAATGGGCAGAAGCAGACGCAATGTTCTTGAGAAAACTAAGCTTAAACAAGAACGAGAATGAGAAGGAGAAGAAGATGAAGAAAGATGAGACATTGGGTTATTCCTCTTCAGTTTTTGGGTTTGAAAAATATAGAAGTAAC

mRNA sequence

AAAAAAACAAAATATTTAAAAGTTCTAAATTTCTCAAATCCCAATCAAAAGTCTCAAGAACTCAAACACATATAAAGAAAAGATACAATGGATTATTCTTCAAATGGTTTCGCCATTGGAAAAGTAACTTCAAAGCAACAAAAATGGGCAGAAGCAGACGCAATGTTCTTGAGAAAACTAAGCTTAAACAAGAACGAGAATGAGAAGGAGAAGAAGATGAAGAAAGATGAGACATTGGGTTATTCCTCTTCAGTTTTTGGGTTTGAAAAATATAGAAGTAAC

Coding sequence (CDS)

ATGGATTATTCTTCAAATGGTTTCGCCATTGGAAAAGTAACTTCAAAGCAACAAAAATGGGCAGAAGCAGACGCAATGTTCTTGAGAAAACTAAGCTTAAACAAGAACGAGAATGAGAAGGAGAAGAAGATGAAGAAAGATGAGACATTGGGTTATTCCTCTTCAGTTTTTGGGTTTGAAAAATATAGAAGTAAC

Protein sequence

MDYSSNGFAIGKVTSKQQKWAEADAMFLRKLSLNKNENEKEKKMKKDETLGYSSSVFGFEKYRSN
Homology
[Close]
BLAST of CsGy2G014460 vs. NCBI nr
Match: KGN62030.1 (hypothetical protein Csa_2G287120 [Cucumis sativus])

HSP 1 Score: 98.6 bits (244), Expect = 8.3e-18
Identity = 65/65 (100.00%), Postives = 65/65 (100.00%), Query Frame = 0 

Query: 1  MDYSSNGFAIGKVTSKQQKWAEADAMFLRKLXXXXXXXXXXXXXXXDETLGYSSSVFGFE 60
          MDYSSNGFAIGKVTSKQQKWAEADAMFLRKLXXXXXXXXXXXXXXXDETLGYSSSVFGFE
Sbjct: 1  MDYSSNGFAIGKVTSKQQKWAEADAMFLRKLXXXXXXXXXXXXXXXDETLGYSSSVFGFE 60

Query: 61 KYRSN 66
          KYRSN
Sbjct: 61 KYRSN 65

[Close]
BLAST of CsGy2G014460 vs. TrEMBL
Match: tr|A0A0A0LJK1|A0A0A0LJK1_CUCSA (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_2G287120 PE=4 SV=1)

HSP 1 Score: 98.6 bits (244), Expect = 5.5e-18
Identity = 65/65 (100.00%), Postives = 65/65 (100.00%), Query Frame = 0 

Query: 1  MDYSSNGFAIGKVTSKQQKWAEADAMFLRKLXXXXXXXXXXXXXXXDETLGYSSSVFGFE 60
          MDYSSNGFAIGKVTSKQQKWAEADAMFLRKLXXXXXXXXXXXXXXXDETLGYSSSVFGFE
Sbjct: 1  MDYSSNGFAIGKVTSKQQKWAEADAMFLRKLXXXXXXXXXXXXXXXDETLGYSSSVFGFE 60

Query: 61 KYRSN 66
          KYRSN
Sbjct: 61 KYRSN 65

The following BLAST results are available for this feature:
BLAST of CsGy2G014460 vs. NCBI nr
Match NameE-valueIdentityDescription
KGN62030.18.3e-18100.00hypothetical protein Csa_2G287120 [Cucumis sativus][more]
BLAST of CsGy2G014460 vs. TAIR10
Match NameE-valueIdentityDescription
BLAST of CsGy2G014460 vs. Swiss-Prot
Match NameE-valueIdentityDescription
BLAST of CsGy2G014460 vs. TrEMBL
Match NameE-valueIdentityDescription
tr|A0A0A0LJK1|A0A0A0LJK1_CUCSA5.5e-18100.00Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_2G287120 PE=4 SV=1[more]
GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
Category Term Accession Term Name
biological_process GO:0008150 biological_process
cellular_component GO:0005575 cellular_component
molecular_function GO:0003674 molecular_function
Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
CsGy2G014460.1CsGy2G014460.1mRNA


InterPro
Analysis Name: InterPro Annotations of cucumber Gy14 genome (v2)
Date Performed: 2018-09-25
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableCOILSCoilCoilcoord: 28..48