CSPI02G14510 (gene) Wild cucumber (PI 183967)

Overview
NameCSPI02G14510
Typegene
OrganismCucumis sativus (Wild cucumber (PI 183967))
DescriptionUnknown protein
LocationChr2 : 14311023 .. 14311325 (-)
Genome Viewer
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: CDS
Hold the cursor over a type above to highlight its positions in the sequence below.
ATGGATTATTCTTCAAATGGTTTCGCCATTGGAAAAGTAACTTCAAAGCAACAAAAATGGGCAGAAGCAGACGCAATGTTCTTGAGAAAACTAAGCTTAAACAAGAACGAGAATGAGAAGGAGAAGAAGATGAAGAAAGATGAGACATTGGGTTATTCCTCTTCAGTTTTTGGGTTTGAAAAATATAGAAGTAACGATATTATTAACTATTCAAGACAAAGGTATTTGAGAAGCTACAAATTTAACGATGATCATAAAGAAGATGATGTTGATCAGGTTCAAAAGACAAGTCCTTTTGAAAAG

mRNA sequence

ATGGATTATTCTTCAAATGGTTTCGCCATTGGAAAAGTAACTTCAAAGCAACAAAAATGGGCAGAAGCAGACGCAATGTTCTTGAGAAAACTAAGCTTAAACAAGAACGAGAATGAGAAGGAGAAGAAGATGAAGAAAGATGAGACATTGGGTTATTCCTCTTCAGTTTTTGGGTTTGAAAAATATAGAAGTAACGATATTATTAACTATTCAAGACAAAGGTATTTGAGAAGCTACAAATTTAACGATGATCATAAAGAAGATGATGTTGATCAGGTTCAAAAGACAAGTCCTTTTGAAAAG

Coding sequence (CDS)

ATGGATTATTCTTCAAATGGTTTCGCCATTGGAAAAGTAACTTCAAAGCAACAAAAATGGGCAGAAGCAGACGCAATGTTCTTGAGAAAACTAAGCTTAAACAAGAACGAGAATGAGAAGGAGAAGAAGATGAAGAAAGATGAGACATTGGGTTATTCCTCTTCAGTTTTTGGGTTTGAAAAATATAGAAGTAACGATATTATTAACTATTCAAGACAAAGGTATTTGAGAAGCTACAAATTTAACGATGATCATAAAGAAGATGATGTTGATCAGGTTCAAAAGACAAGTCCTTTTGAAAAG
Homology
[Close]
BLAST of CSPI02G14510 vs. TrEMBL
Match: A0A0A0LJK1_CUCSA (Uncharacterized protein OS=Cucumis sativus GN=Csa_2G287120 PE=4 SV=1)

HSP 1 Score: 199.1 bits (505), Expect = 2.5e-48
Identity = 101/101 (100.00%), Postives = 101/101 (100.00%), Query Frame = 1 

Query: 1   MDYSSNGFAIGKVTSKQQKWAEADAMFLRKLSLNKNENEKEKKMKKDETLGYSSSVFGFE 60
           MDYSSNGFAIGKVTSKQQKWAEADAMFLRKLSLNKNENEKEKKMKKDETLGYSSSVFGFE
Sbjct: 1   MDYSSNGFAIGKVTSKQQKWAEADAMFLRKLSLNKNENEKEKKMKKDETLGYSSSVFGFE 60

Query: 61  KYRSNDIINYSRQRYLRSYKFNDDHKEDDVDQVQKTSPFEK 102
           KYRSNDIINYSRQRYLRSYKFNDDHKEDDVDQVQKTSPFEK
Sbjct: 61  KYRSNDIINYSRQRYLRSYKFNDDHKEDDVDQVQKTSPFEK 101

[Close]
BLAST of CSPI02G14510 vs. NCBI nr
Match: gi|700206911|gb|KGN62030.1| (hypothetical protein Csa_2G287120 [Cucumis sativus])

HSP 1 Score: 199.1 bits (505), Expect = 3.6e-48
Identity = 101/101 (100.00%), Postives = 101/101 (100.00%), Query Frame = 1 

Query: 1   MDYSSNGFAIGKVTSKQQKWAEADAMFLRKLSLNKNENEKEKKMKKDETLGYSSSVFGFE 60
           MDYSSNGFAIGKVTSKQQKWAEADAMFLRKLSLNKNENEKEKKMKKDETLGYSSSVFGFE
Sbjct: 1   MDYSSNGFAIGKVTSKQQKWAEADAMFLRKLSLNKNENEKEKKMKKDETLGYSSSVFGFE 60

Query: 61  KYRSNDIINYSRQRYLRSYKFNDDHKEDDVDQVQKTSPFEK 102
           KYRSNDIINYSRQRYLRSYKFNDDHKEDDVDQVQKTSPFEK
Sbjct: 61  KYRSNDIINYSRQRYLRSYKFNDDHKEDDVDQVQKTSPFEK 101

The following BLAST results are available for this feature:
BLAST of CSPI02G14510 vs. Swiss-Prot
Match NameE-valueIdentityDescription
BLAST of CSPI02G14510 vs. TrEMBL
Match NameE-valueIdentityDescription
A0A0A0LJK1_CUCSA2.5e-48100.00Uncharacterized protein OS=Cucumis sativus GN=Csa_2G287120 PE=4 SV=1[more]
BLAST of CSPI02G14510 vs. TAIR10
Match NameE-valueIdentityDescription
BLAST of CSPI02G14510 vs. NCBI nr
Match NameE-valueIdentityDescription
gi|700206911|gb|KGN62030.1|3.6e-48100.00hypothetical protein Csa_2G287120 [Cucumis sativus][more]
Annotated Terms
The following terms have been associated with this gene:
Vocabulary: INTERPRO
TermDefinition
GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
Category Term Accession Term Name
biological_process GO:0008150 biological_process
cellular_component GO:0005575 cellular_component
molecular_function GO:0003674 molecular_function
Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
CSPI02G14510.1CSPI02G14510.1mRNA


InterPro
Analysis Name: InterPro Annotations of cucumber (PI183967)
Date Performed: 2017-01-17
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableunknownCoilCoilcoord: 28..48
scor