CsGy2G012580 (gene) Cucumber (Gy14) v2

Overview
NameCsGy2G012580
Typegene
OrganismCucumis sativus (Cucumber (Gy14) v2)
Descriptionzinc finger CCHC domain-containing protein 10
LocationChr2 : 12457704 .. 12459640 (+)
Genome Viewer
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonfive_prime_UTRCDSthree_prime_UTR
Hold the cursor over a type above to highlight its positions in the sequence below.
TTTTAAAGAAAAATCATAGTGACCCGACCCGACCGAATTCGGGTTCTTATAAAAGCCCCGTCTACTGTCCGTCCTCCATATTTCTCATTCCATTCGAGATTTTGTACGAACTGGATTTTGCTAAATCTTCAAACCCTAAGGAAGGTATGTACCCACTACGATTTCTCTACTTTCGATGGATTTTCAAGCTTTGATAGCTCCAAACATTGCCTAATTACACTCGATCTTTCGGATTTTACCTTTTTCCTTACGAACCAGATCGGTGTTCTACTCCAGTTACGATTTGTTAATAAGAAACATTAGATTTTTGTTGTGATTATGTTGTTTTAAGCTATACTTTTCTCTGATTTTATTCTAATTCCCTCCCTCCTACTGTAACTATTGGAAACCCTAAATTAATTGTTCTTTGCTCTTTTCTTGGTTTTTTTTGTGTTCTTTACTTTTTGTACGATTTATCTGCTCGTAATCTAGGGATTTTTTCTTATGGTCTTATTCTTCCAATTTATCTTCCACCCGGGTATTTATTTATATTTAGATTTGGAAGTCTTAGAATGATTTGTAAGAAGGAAACCTGATACTTCTTGTTTCGTTTTTCTCGTTATGTCTGTTTGCTCTTAATTTTGGTAATTCATCGCGATCCTATTCTAAAGTTTCTGATTGCTCGTCGTGTGTTTGGATTCAGATATTGAAAAAACAAACCATGTCTAGTAAGAAGGAAGAGAAGTCGCAAGCTGCTGCTGAAAGGATTAAGGCTGCCGCTCTTAGTGCTGCAAAAGGTCTTAGTCGTGCCCAGGCCGAACGTGCTGCTGCGGCTGCTGCTCGGAATGTTAATGCTTATGGGCAGAAGGAAGAAGGGCCTAGCAGATGGCAGGAGAAAAGGGAAGCAAAGAGGCAGATGTATTTGATGAGTACTGAAAAGGCAGTAAGATTAGGTGAAAGAAAAGACATTAAGGGCTCTATGTCTGGTGCTGGTGGAGCTGCTGCACAATGCCAGAAATGTTATCAGATGGGACACTGGACCTACGAATGCAAAAACGAACGAGTTTACATATCTCGTCCATCTCGAACTCAACAACTAAAAAATCCAAAGCTGAGGATGAAGATGGAAGTCTCATTGGAGTTGGACAACCCAGATCCTGGTGAGGAGAAGAAGCCCAAGAAGCATTCGAAGAAGAAAAGTAAAAGAAAGCATCGGTCCAATGCAAAATCCAATAGCGACAGTGAGGCCTCTGTGTTTGAGACTGTTAGTGGGTCCTCCTCAGTTACTGAATCTGACGATTCTTCTGAAGAAAGCAGTTCAGATTACAGTTCTTCATCCGAATCAGAGAGTGAAAGGAGTCGAAGAAGGAGAAAGAAGCAGAAGAGGGGGAGAAGAAAGAGGAGGTACAGTTCATCTTCTGATTCTTCTGATTCAGACTCAAGGTCCGAATCAGAATCTGATTCTGATAATGAACGTAGTAGGAGGAAGAGCCGACGACACAGCAGAAAACGCTAGTTAAGGGGGATCGAGTGAAGCGGATTAGAATTGTCGATAAATCATGGCAATTGTAGTCAGTTTAGAGATTTGAGTTTCATTCAGTTTCTTGTTTGGGAAGATCTGAAGTTTGGGGTTTCATTTTTGATTTTAGCAACTACTTCCCTTCCTTTGTTCTCTTCTTAGCTCTTATGAATGTATAAATTGTTGTTTATGCTTTACTTTCTATAACTGTTATGTTTACATATGTTGGTTCTTGAATAAATTTTGGTTAATGTTTATTTGTCGATGTCGCACCCAATTTCAGGAGTGCAGTTCTAAAGATTGGTGTTGAAATGTGATTGTAATACATGAGAAAGATAGTTAGATTACAAACTGTTGGAAGAAAATGGAATAGGGATTTCAAATTGGACTTAGCCCTCAATTCAAATGTGGATTTATATGGGTATGGATTGAATTCATT

mRNA sequence

TTTTAAAGAAAAATCATAGTGACCCGACCCGACCGAATTCGGGTTCTTATAAAAGCCCCGTCTACTGTCCGTCCTCCATATTTCTCATTCCATTCGAGATTTTGTACGAACTGGATTTTGCTAAATCTTCAAACCCTAAGGAAGATATTGAAAAAACAAACCATGTCTAGTAAGAAGGAAGAGAAGTCGCAAGCTGCTGCTGAAAGGATTAAGGCTGCCGCTCTTAGTGCTGCAAAAGGTCTTAGTCGTGCCCAGGCCGAACGTGCTGCTGCGGCTGCTGCTCGGAATGTTAATGCTTATGGGCAGAAGGAAGAAGGGCCTAGCAGATGGCAGGAGAAAAGGGAAGCAAAGAGGCAGATGTATTTGATGAGTACTGAAAAGGCAGTAAGATTAGGTGAAAGAAAAGACATTAAGGGCTCTATGTCTGGTGCTGGTGGAGCTGCTGCACAATGCCAGAAATGTTATCAGATGGGACACTGGACCTACGAATGCAAAAACGAACGAGTTTACATATCTCGTCCATCTCGAACTCAACAACTAAAAAATCCAAAGCTGAGGATGAAGATGGAAGTCTCATTGGAGTTGGACAACCCAGATCCTGGTGAGGAGAAGAAGCCCAAGAAGCATTCGAAGAAGAAAAGTAAAAGAAAGCATCGGTCCAATGCAAAATCCAATAGCGACAGTGAGGCCTCTGTGTTTGAGACTGTTAGTGGGTCCTCCTCAGTTACTGAATCTGACGATTCTTCTGAAGAAAGCAGTTCAGATTACAGTTCTTCATCCGAATCAGAGAGTGAAAGGAGTCGAAGAAGGAGAAAGAAGCAGAAGAGGGGGAGAAGAAAGAGGAGGTACAGTTCATCTTCTGATTCTTCTGATTCAGACTCAAGGTCCGAATCAGAATCTGATTCTGATAATGAACGTAGTAGGAGGAAGAGCCGACGACACAGCAGAAAACGCTAGTTAAGGGGGATCGAGTGAAGCGGATTAGAATTGTCGATAAATCATGGCAATTGTAGTCAGTTTAGAGATTTGAGTTTCATTCAGTTTCTTGTTTGGGAAGATCTGAAGTTTGGGGTTTCATTTTTGATTTTAGCAACTACTTCCCTTCCTTTGTTCTCTTCTTAGCTCTTATGAATGTATAAATTGTTGTTTATGCTTTACTTTCTATAACTGTTATGTTTACATATGTTGGTTCTTGAATAAATTTTGGTTAATGTTTATTTGTCGATGTCGCACCCAATTTCAGGAGTGCAGTTCTAAAGATTGGTGTTGAAATGTGATTGTAATACATGAGAAAGATAGTTAGATTACAAACTGTTGGAAGAAAATGGAATAGGGATTTCAAATTGGACTTAGCCCTCAATTCAAATGTGGATTTATATGGGTATGGATTGAATTCATT

Coding sequence (CDS)

ATGTCTAGTAAGAAGGAAGAGAAGTCGCAAGCTGCTGCTGAAAGGATTAAGGCTGCCGCTCTTAGTGCTGCAAAAGGTCTTAGTCGTGCCCAGGCCGAACGTGCTGCTGCGGCTGCTGCTCGGAATGTTAATGCTTATGGGCAGAAGGAAGAAGGGCCTAGCAGATGGCAGGAGAAAAGGGAAGCAAAGAGGCAGATGTATTTGATGAGTACTGAAAAGGCAGTAAGATTAGGTGAAAGAAAAGACATTAAGGGCTCTATGTCTGGTGCTGGTGGAGCTGCTGCACAATGCCAGAAATGTTATCAGATGGGACACTGGACCTACGAATGCAAAAACGAACGAGTTTACATATCTCGTCCATCTCGAACTCAACAACTAAAAAATCCAAAGCTGAGGATGAAGATGGAAGTCTCATTGGAGTTGGACAACCCAGATCCTGGTGAGGAGAAGAAGCCCAAGAAGCATTCGAAGAAGAAAAGTAAAAGAAAGCATCGGTCCAATGCAAAATCCAATAGCGACAGTGAGGCCTCTGTGTTTGAGACTGTTAGTGGGTCCTCCTCAGTTACTGAATCTGACGATTCTTCTGAAGAAAGCAGTTCAGATTACAGTTCTTCATCCGAATCAGAGAGTGAAAGGAGTCGAAGAAGGAGAAAGAAGCAGAAGAGGGGGAGAAGAAAGAGGAGGTACAGTTCATCTTCTGATTCTTCTGATTCAGACTCAAGGTCCGAATCAGAATCTGATTCTGATAATGAACGTAGTAGGAGGAAGAGCCGACGACACAGCAGAAAACGCTAG

Protein sequence

MSSKKEEKSQAAAERIKAAALSAAKGLSRAQAERAAAAAARNVNAYGQKEEGPSRWQEKREAKRQMYLMSTEKAVRLGERKDIKGSMSGAGGAAAQCQKCYQMGHWTYECKNERVYISRPSRTQQLKNPKLRMKMEVSLELDNPDPGEEKKPKKHSKKKSKRKHRSNAKSNSDSEASVFETVSGSSSVTESDDSSEESSSDYSSSSESESERSRRRRKKQKRGRRKRRYSSSSDSSDSDSRSESESDSDNERSRRKSRRHSRKR
Homology
[Close]
BLAST of CsGy2G012580 vs. NCBI nr
Match: XP_011649249.1 (PREDICTED: zinc finger CCHC domain-containing protein 10 [Cucumis sativus] >KGN61833.1 hypothetical protein Csa_2G249870 [Cucumis sativus])

HSP 1 Score: 233.8 bits (595), Expect = 6.7e-58
Identity = 131/131 (100.00%), Postives = 131/131 (100.00%), Query Frame = 0 

Query: 1   MSSKKEEKSQAAAERIKAAALSAAKGLSRAQAXXXXXXXARNVNAYGQKEEGPSRWQEKR 60
           MSSKKEEKSQAAAERIKAAALSAAKGLSRAQAXXXXXXXARNVNAYGQKEEGPSRWQEKR
Sbjct: 1   MSSKKEEKSQAAAERIKAAALSAAKGLSRAQAXXXXXXXARNVNAYGQKEEGPSRWQEKR 60

Query: 61  EAKRQMYLMSTEKAVRLGERKDIKGSMSGAGGAAAQCQKCYQMGHWTYECKNERVYISRP 120
           EAKRQMYLMSTEKAVRLGERKDIKGSMSGAGGAAAQCQKCYQMGHWTYECKNERVYISRP
Sbjct: 61  EAKRQMYLMSTEKAVRLGERKDIKGSMSGAGGAAAQCQKCYQMGHWTYECKNERVYISRP 120

Query: 121 SRTQQLKNPKL 132
           SRTQQLKNPKL
Sbjct: 121 SRTQQLKNPKL 131

[Close]
BLAST of CsGy2G012580 vs. NCBI nr
Match: XP_008460989.1 (PREDICTED: zinc finger CCHC domain-containing protein 10 [Cucumis melo] >XP_008460988.2 PREDICTED: zinc finger CCHC domain-containing protein 10 [Cucumis melo])

HSP 1 Score: 231.5 bits (589), Expect = 3.3e-57
Identity = 130/131 (99.24%), Postives = 130/131 (99.24%), Query Frame = 0 

Query: 1   MSSKKEEKSQAAAERIKAAALSAAKGLSRAQAXXXXXXXARNVNAYGQKEEGPSRWQEKR 60
           MSSKKEEKSQAAAERIKAAALSAAKGLSRAQAXXXXXXXARNVNAYGQKEEGPSRWQEKR
Sbjct: 1   MSSKKEEKSQAAAERIKAAALSAAKGLSRAQAXXXXXXXARNVNAYGQKEEGPSRWQEKR 60

Query: 61  EAKRQMYLMSTEKAVRLGERKDIKGSMSGAGGAAAQCQKCYQMGHWTYECKNERVYISRP 120
           EAKRQMYLMSTEKAVRLGERKDIKGSMS AGGAAAQCQKCYQMGHWTYECKNERVYISRP
Sbjct: 61  EAKRQMYLMSTEKAVRLGERKDIKGSMSSAGGAAAQCQKCYQMGHWTYECKNERVYISRP 120

Query: 121 SRTQQLKNPKL 132
           SRTQQLKNPKL
Sbjct: 121 SRTQQLKNPKL 131

[Close]
BLAST of CsGy2G012580 vs. NCBI nr
Match: XP_022138805.1 (zinc finger CCHC domain-containing protein 10 [Momordica charantia])

HSP 1 Score: 226.9 bits (577), Expect = 8.2e-56
Identity = 127/131 (96.95%), Postives = 129/131 (98.47%), Query Frame = 0 

Query: 1   MSSKKEEKSQAAAERIKAAALSAAKGLSRAQAXXXXXXXARNVNAYGQKEEGPSRWQEKR 60
           MSSKKEEKSQAAAERIKAAALSAAKGLSRAQAXXXXXXXARNVNAYGQKEEGPSRWQEKR
Sbjct: 1   MSSKKEEKSQAAAERIKAAALSAAKGLSRAQAXXXXXXXARNVNAYGQKEEGPSRWQEKR 60

Query: 61  EAKRQMYLMSTEKAVRLGERKDIKGSMSGAGGAAAQCQKCYQMGHWTYECKNERVYISRP 120
           EAKRQMYLMSTEKAVRLGERKD+K SMS AGGAAAQCQKCYQ+GHWTYECKNERVYISRP
Sbjct: 61  EAKRQMYLMSTEKAVRLGERKDLKASMSSAGGAAAQCQKCYQVGHWTYECKNERVYISRP 120

Query: 121 SRTQQLKNPKL 132
           SRTQQLKNPKL
Sbjct: 121 SRTQQLKNPKL 131

[Close]
BLAST of CsGy2G012580 vs. NCBI nr
Match: XP_022959515.1 (zinc finger CCHC domain-containing protein 10-like [Cucurbita moschata])

HSP 1 Score: 225.7 bits (574), Expect = 1.8e-55
Identity = 121/131 (92.37%), Postives = 121/131 (92.37%), Query Frame = 0 

Query: 1   MSSKKEEKSQAAAERIKAAALSAAKGLSRAQAXXXXXXXARNVNAYGQKEEGPSRWQEKR 60
           MSSKKEEKSQAAAERIKAAALSAAKGLSRAQA       ARNVNAYGQKEEGPSRWQEKR
Sbjct: 1   MSSKKEEKSQAAAERIKAAALSAAKGLSRAQAERAATAAARNVNAYGQKEEGPSRWQEKR 60

Query: 61  EAKRQMYLMSTEKAVRLGERKDIKGSMSGAGGAAAQCQKCYQMGHWTYECKNERVYISRP 120
           EAKRQMYLMSTEKAVRLGERKDIK SMS AGGAAAQCQKCYQ GHWTYECKNERVYISRP
Sbjct: 61  EAKRQMYLMSTEKAVRLGERKDIKVSMSSAGGAAAQCQKCYQSGHWTYECKNERVYISRP 120

Query: 121 SRTQQLKNPKL 132
           SRTQQLKNPKL
Sbjct: 121 SRTQQLKNPKL 131

[Close]
BLAST of CsGy2G012580 vs. NCBI nr
Match: XP_023006369.1 (zinc finger CCHC domain-containing protein 10 [Cucurbita maxima] >XP_023006370.1 zinc finger CCHC domain-containing protein 10 [Cucurbita maxima])

HSP 1 Score: 225.7 bits (574), Expect = 1.8e-55
Identity = 121/131 (92.37%), Postives = 121/131 (92.37%), Query Frame = 0 

Query: 1   MSSKKEEKSQAAAERIKAAALSAAKGLSRAQAXXXXXXXARNVNAYGQKEEGPSRWQEKR 60
           MSSKKEEKSQAAAERIKAAALSAAKGLSRAQA       ARNVNAYGQKEEGPSRWQEKR
Sbjct: 1   MSSKKEEKSQAAAERIKAAALSAAKGLSRAQAERAATAAARNVNAYGQKEEGPSRWQEKR 60

Query: 61  EAKRQMYLMSTEKAVRLGERKDIKGSMSGAGGAAAQCQKCYQMGHWTYECKNERVYISRP 120
           EAKRQMYLMSTEKAVRLGERKDIK SMS AGGAAAQCQKCYQ GHWTYECKNERVYISRP
Sbjct: 61  EAKRQMYLMSTEKAVRLGERKDIKVSMSSAGGAAAQCQKCYQSGHWTYECKNERVYISRP 120

Query: 121 SRTQQLKNPKL 132
           SRTQQLKNPKL
Sbjct: 121 SRTQQLKNPKL 131

[Close]
BLAST of CsGy2G012580 vs. TAIR10
Match: AT5G49400.1 (zinc knuckle (CCHC-type) family protein)

HSP 1 Score: 192.6 bits (488), Expect = 3.1e-49
Identity = 105/134 (78.36%), Postives = 111/134 (82.84%), Query Frame = 0 

Query: 1   MSSKKEEKSQAAAERIKAAALSAAKGLSRAQAXXXXXXXARNVNAYGQKEEGPSRWQEKR 60
           MS+ K+EKSQ AA+RIKAA L+AAKGLSR QA       ARNVNAYGQKEEGPSRWQEKR
Sbjct: 1   MSNSKDEKSQDAADRIKAATLTAAKGLSRTQAERAAAAAARNVNAYGQKEEGPSRWQEKR 60

Query: 61  EAKRQMYLMSTEKAVRLGERKDIKGSMSGAG---GAAAQCQKCYQMGHWTYECKNERVYI 120
           E KRQMYLMSTEKAVRLGERKD   S S  G    AA+QCQKC+Q GHWTYECKNERVYI
Sbjct: 61  ELKRQMYLMSTEKAVRLGERKDKTMSASAVGSSASAASQCQKCFQAGHWTYECKNERVYI 120

Query: 121 SRPSRTQQLKNPKL 132
           SRPSRTQQLKNPKL
Sbjct: 121 SRPSRTQQLKNPKL 134

[Close]
BLAST of CsGy2G012580 vs. Swiss-Prot
Match: sp|Q9CX48|ZCH10_MOUSE (Zinc finger CCHC domain-containing protein 10 OS=Mus musculus OX=10090 GN=Zcchc10 PE=2 SV=1)

HSP 1 Score: 55.8 bits (133), Expect = 8.2e-07
Identity = 21/32 (65.62%), Postives = 26/32 (81.25%), Query Frame = 0 

Query: 96  QCQKCYQMGHWTYECKNERVYISRPSRTQQLK 128
           +CQKC + GHWTYECK +R Y+ RPSRT +LK
Sbjct: 22  RCQKCLEFGHWTYECKGKRKYLHRPSRTAELK 53

[Close]
BLAST of CsGy2G012580 vs. Swiss-Prot
Match: sp|Q5EB97|ZCH10_RAT (Zinc finger CCHC domain-containing protein 10 OS=Rattus norvegicus OX=10116 GN=Zcchc10 PE=2 SV=2)

HSP 1 Score: 55.8 bits (133), Expect = 8.2e-07
Identity = 21/32 (65.62%), Postives = 26/32 (81.25%), Query Frame = 0 

Query: 96  QCQKCYQMGHWTYECKNERVYISRPSRTQQLK 128
           +CQKC + GHWTYECK +R Y+ RPSRT +LK
Sbjct: 22  RCQKCLEFGHWTYECKGKRKYLHRPSRTAELK 53

[Close]
BLAST of CsGy2G012580 vs. Swiss-Prot
Match: sp|Q8TBK6|ZCH10_HUMAN (Zinc finger CCHC domain-containing protein 10 OS=Homo sapiens OX=9606 GN=ZCCHC10 PE=1 SV=1)

HSP 1 Score: 53.5 bits (127), Expect = 4.1e-06
Identity = 22/41 (53.66%), Postives = 28/41 (68.29%), Query Frame = 0 

Query: 87  MSGAGGAAAQCQKCYQMGHWTYECKNERVYISRPSRTQQLK 128
           +S A     +CQKC + GHWTYEC  +R Y+ RPSRT +LK
Sbjct: 35  ISEANKQHVRCQKCLEFGHWTYECTGKRKYLHRPSRTAELK 75

[Close]
BLAST of CsGy2G012580 vs. TrEMBL
Match: tr|A0A0A0LJ33|A0A0A0LJ33_CUCSA (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_2G249870 PE=4 SV=1)

HSP 1 Score: 233.8 bits (595), Expect = 4.4e-58
Identity = 131/131 (100.00%), Postives = 131/131 (100.00%), Query Frame = 0 

Query: 1   MSSKKEEKSQAAAERIKAAALSAAKGLSRAQAXXXXXXXARNVNAYGQKEEGPSRWQEKR 60
           MSSKKEEKSQAAAERIKAAALSAAKGLSRAQAXXXXXXXARNVNAYGQKEEGPSRWQEKR
Sbjct: 1   MSSKKEEKSQAAAERIKAAALSAAKGLSRAQAXXXXXXXARNVNAYGQKEEGPSRWQEKR 60

Query: 61  EAKRQMYLMSTEKAVRLGERKDIKGSMSGAGGAAAQCQKCYQMGHWTYECKNERVYISRP 120
           EAKRQMYLMSTEKAVRLGERKDIKGSMSGAGGAAAQCQKCYQMGHWTYECKNERVYISRP
Sbjct: 61  EAKRQMYLMSTEKAVRLGERKDIKGSMSGAGGAAAQCQKCYQMGHWTYECKNERVYISRP 120

Query: 121 SRTQQLKNPKL 132
           SRTQQLKNPKL
Sbjct: 121 SRTQQLKNPKL 131

[Close]
BLAST of CsGy2G012580 vs. TrEMBL
Match: tr|A0A1S3CDQ2|A0A1S3CDQ2_CUCME (zinc finger CCHC domain-containing protein 10 OS=Cucumis melo OX=3656 GN=LOC103499707 PE=4 SV=1)

HSP 1 Score: 231.5 bits (589), Expect = 2.2e-57
Identity = 130/131 (99.24%), Postives = 130/131 (99.24%), Query Frame = 0 

Query: 1   MSSKKEEKSQAAAERIKAAALSAAKGLSRAQAXXXXXXXARNVNAYGQKEEGPSRWQEKR 60
           MSSKKEEKSQAAAERIKAAALSAAKGLSRAQAXXXXXXXARNVNAYGQKEEGPSRWQEKR
Sbjct: 1   MSSKKEEKSQAAAERIKAAALSAAKGLSRAQAXXXXXXXARNVNAYGQKEEGPSRWQEKR 60

Query: 61  EAKRQMYLMSTEKAVRLGERKDIKGSMSGAGGAAAQCQKCYQMGHWTYECKNERVYISRP 120
           EAKRQMYLMSTEKAVRLGERKDIKGSMS AGGAAAQCQKCYQMGHWTYECKNERVYISRP
Sbjct: 61  EAKRQMYLMSTEKAVRLGERKDIKGSMSSAGGAAAQCQKCYQMGHWTYECKNERVYISRP 120

Query: 121 SRTQQLKNPKL 132
           SRTQQLKNPKL
Sbjct: 121 SRTQQLKNPKL 131

[Close]
BLAST of CsGy2G012580 vs. TrEMBL
Match: tr|A0A2H3Z5Z3|A0A2H3Z5Z3_PHODC (zinc finger CCHC domain-containing protein 10 OS=Phoenix dactylifera OX=42345 GN=LOC103720632 PE=4 SV=1)

HSP 1 Score: 218.4 bits (555), Expect = 1.9e-53
Identity = 121/131 (92.37%), Postives = 128/131 (97.71%), Query Frame = 0 

Query: 1   MSSKKEEKSQAAAERIKAAALSAAKGLSRAQAXXXXXXXARNVNAYGQKEEGPSRWQEKR 60
           MSSKKEEK+QAAAERIKAAALSAAKGLSRAQAXXXXXXXARNVNAYGQKEEGPSRWQE++
Sbjct: 1   MSSKKEEKAQAAAERIKAAALSAAKGLSRAQAXXXXXXXARNVNAYGQKEEGPSRWQERK 60

Query: 61  EAKRQMYLMSTEKAVRLGERKDIKGSMSGAGGAAAQCQKCYQMGHWTYECKNERVYISRP 120
           EAKRQMYLMSTEKAVRLGERKD+K S+S AGGAAAQCQKC+Q GHWTYECKNERVY+SRP
Sbjct: 61  EAKRQMYLMSTEKAVRLGERKDLKASVSSAGGAAAQCQKCFQSGHWTYECKNERVYMSRP 120

Query: 121 SRTQQLKNPKL 132
           SRTQQLKNPKL
Sbjct: 121 SRTQQLKNPKL 131

[Close]
BLAST of CsGy2G012580 vs. TrEMBL
Match: tr|A0A2P5FCI6|A0A2P5FCI6_9ROSA (Zinc finger, CCHC-type OS=Trema orientalis OX=63057 GN=TorRG33x02_086630 PE=4 SV=1)

HSP 1 Score: 216.5 bits (550), Expect = 7.3e-53
Identity = 113/130 (86.92%), Postives = 119/130 (91.54%), Query Frame = 0 

Query: 1   MSSKKEEKSQAAAERIKAAALSAAKGLSRAQAXXXXXXXARNVNAYGQKEEGPSRWQEKR 60
           MSSKKEEKSQAAA+RIKAAALSAAKGLSRAQA       ARNVNAYGQKEEGPSRWQEKR
Sbjct: 1   MSSKKEEKSQAAADRIKAAALSAAKGLSRAQAERAAAAAARNVNAYGQKEEGPSRWQEKR 60

Query: 61  EAKRQMYLMSTEKAVRLGERKDIKGSMSGAGGAAAQCQKCYQMGHWTYECKNERVYISRP 120
           EAKRQMYLMSTEKAVRLGERKD+K +MS  GGAA+QCQKC+Q GHWTYECKNERVYI+RP
Sbjct: 61  EAKRQMYLMSTEKAVRLGERKDLKANMSAVGGAASQCQKCFQPGHWTYECKNERVYIARP 120

Query: 121 SRTQQLKNPK 131
           SRTQQLKNPK
Sbjct: 121 SRTQQLKNPK 130

[Close]
BLAST of CsGy2G012580 vs. TrEMBL
Match: tr|A0A2P5C413|A0A2P5C413_PARAD (Zinc finger, CCHC-type OS=Parasponia andersonii OX=3476 GN=PanWU01x14_186660 PE=4 SV=1)

HSP 1 Score: 216.5 bits (550), Expect = 7.3e-53
Identity = 113/130 (86.92%), Postives = 119/130 (91.54%), Query Frame = 0 

Query: 1   MSSKKEEKSQAAAERIKAAALSAAKGLSRAQAXXXXXXXARNVNAYGQKEEGPSRWQEKR 60
           MSSKKEEKSQAAA+RIKAAALSAAKGLSRAQA       ARNVNAYGQKEEGPSRWQEKR
Sbjct: 1   MSSKKEEKSQAAADRIKAAALSAAKGLSRAQAERAAAAAARNVNAYGQKEEGPSRWQEKR 60

Query: 61  EAKRQMYLMSTEKAVRLGERKDIKGSMSGAGGAAAQCQKCYQMGHWTYECKNERVYISRP 120
           EAKRQMYLMSTEKAVRLGERKD+K +MS  GGAA+QCQKC+Q GHWTYECKNERVYI+RP
Sbjct: 61  EAKRQMYLMSTEKAVRLGERKDLKANMSAVGGAASQCQKCFQPGHWTYECKNERVYIARP 120

Query: 121 SRTQQLKNPK 131
           SRTQQLKNPK
Sbjct: 121 SRTQQLKNPK 130

The following BLAST results are available for this feature:
BLAST of CsGy2G012580 vs. NCBI nr
Match NameE-valueIdentityDescription
XP_011649249.16.7e-58100.00PREDICTED: zinc finger CCHC domain-containing protein 10 [Cucumis sativus] >KGN6... [more]
XP_008460989.13.3e-5799.24PREDICTED: zinc finger CCHC domain-containing protein 10 [Cucumis melo] >XP_0084... [more]
XP_022138805.18.2e-5696.95zinc finger CCHC domain-containing protein 10 [Momordica charantia][more]
XP_022959515.11.8e-5592.37zinc finger CCHC domain-containing protein 10-like [Cucurbita moschata][more]
XP_023006369.11.8e-5592.37zinc finger CCHC domain-containing protein 10 [Cucurbita maxima] >XP_023006370.1... [more]
BLAST of CsGy2G012580 vs. TAIR10
Match NameE-valueIdentityDescription
AT5G49400.13.1e-4978.36zinc knuckle (CCHC-type) family protein[more]
BLAST of CsGy2G012580 vs. Swiss-Prot
Match NameE-valueIdentityDescription
sp|Q9CX48|ZCH10_MOUSE8.2e-0765.63Zinc finger CCHC domain-containing protein 10 OS=Mus musculus OX=10090 GN=Zcchc1... [more]
sp|Q5EB97|ZCH10_RAT8.2e-0765.63Zinc finger CCHC domain-containing protein 10 OS=Rattus norvegicus OX=10116 GN=Z... [more]
sp|Q8TBK6|ZCH10_HUMAN4.1e-0653.66Zinc finger CCHC domain-containing protein 10 OS=Homo sapiens OX=9606 GN=ZCCHC10... [more]
BLAST of CsGy2G012580 vs. TrEMBL
Match NameE-valueIdentityDescription
tr|A0A0A0LJ33|A0A0A0LJ33_CUCSA4.4e-58100.00Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_2G249870 PE=4 SV=1[more]
tr|A0A1S3CDQ2|A0A1S3CDQ2_CUCME2.2e-5799.24zinc finger CCHC domain-containing protein 10 OS=Cucumis melo OX=3656 GN=LOC1034... [more]
tr|A0A2H3Z5Z3|A0A2H3Z5Z3_PHODC1.9e-5392.37zinc finger CCHC domain-containing protein 10 OS=Phoenix dactylifera OX=42345 GN... [more]
tr|A0A2P5FCI6|A0A2P5FCI6_9ROSA7.3e-5386.92Zinc finger, CCHC-type OS=Trema orientalis OX=63057 GN=TorRG33x02_086630 PE=4 SV... [more]
tr|A0A2P5C413|A0A2P5C413_PARAD7.3e-5386.92Zinc finger, CCHC-type OS=Parasponia andersonii OX=3476 GN=PanWU01x14_186660 PE=... [more]
Annotated Terms
The following terms have been associated with this gene:
Vocabulary: Molecular Function
TermDefinition
GO:0008270zinc ion binding
GO:0003676nucleic acid binding
Vocabulary: INTERPRO
TermDefinition
IPR036875Znf_CCHC_sf
GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
Category Term Accession Term Name
biological_process GO:0008150 biological_process
cellular_component GO:0005575 cellular_component
molecular_function GO:0003676 nucleic acid binding
molecular_function GO:0008270 zinc ion binding
Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
CsGy2G012580.1CsGy2G012580.1mRNA


InterPro
Analysis Name: InterPro Annotations of cucumber Gy14 genome (v2)
Date Performed: 2018-09-25
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availablePFAMPF13917zf-CCHC_3coord: 93..129
e-value: 2.0E-20
score: 72.3
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 121..264
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 229..254
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 171..206
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 133..152
NoneNo IPR availablePANTHERPTHR13491ZCCHC10 PROTEINcoord: 46..223
IPR036875Zinc finger, CCHC-type superfamilySUPERFAMILYSSF57756Retrovirus zinc finger-like domainscoord: 80..113

Synteny
The following gene(s) are orthologous to this gene:
GeneOrthologueOrganismBlock
CsGy2G012580Csa2G249870Cucumber (Chinese Long) v2cgybcuB056
CsGy2G012580MELO3C023334Melon (DHL92) v3.5.1cgybmeB078
CsGy2G012580CSPI02G12560Wild cucumber (PI 183967)cgybcpiB056
CsGy2G012580MELO3C023334.2Melon (DHL92) v3.6.1cgybmedB074
CsGy2G012580CsaV3_2G015100Cucumber (Chinese Long) v3cgybcucB064
The following gene(s) are paralogous to this gene:

None

The following block(s) are covering this gene:
GeneOrganismBlock
CsGy2G012580Cucumber (Gy14) v2cgybcgybB061
CsGy2G012580Cucumber (Gy14) v2cgybcgybB071
CsGy2G012580Cucurbita maxima (Rimu)cgybcmaB151
CsGy2G012580Cucurbita maxima (Rimu)cgybcmaB200
CsGy2G012580Cucurbita maxima (Rimu)cgybcmaB218
CsGy2G012580Cucurbita maxima (Rimu)cgybcmaB229
CsGy2G012580Cucurbita moschata (Rifu)cgybcmoB143
CsGy2G012580Cucurbita moschata (Rifu)cgybcmoB194
CsGy2G012580Cucurbita moschata (Rifu)cgybcmoB202
CsGy2G012580Cucurbita moschata (Rifu)cgybcmoB209
CsGy2G012580Cucurbita moschata (Rifu)cgybcmoB220
CsGy2G012580Cucurbita pepo (Zucchini)cgybcpeB185
CsGy2G012580Cucurbita pepo (Zucchini)cgybcpeB193
CsGy2G012580Cucurbita pepo (Zucchini)cgybcpeB226
CsGy2G012580Cucurbita pepo (Zucchini)cgybcpeB240
CsGy2G012580Cucumber (Chinese Long) v2cgybcuB088
CsGy2G012580Bottle gourd (USVL1VR-Ls)cgyblsiB086
CsGy2G012580Bottle gourd (USVL1VR-Ls)cgyblsiB090
CsGy2G012580Melon (DHL92) v3.5.1cgybmeB088
CsGy2G012580Melon (DHL92) v3.6.1cgybmedB083
CsGy2G012580Watermelon (Charleston Gray)cgybwcgB103
CsGy2G012580Watermelon (Charleston Gray)cgybwcgB122
CsGy2G012580Watermelon (97103) v1cgybwmB147
CsGy2G012580Watermelon (97103) v1cgybwmB141
CsGy2G012580Wild cucumber (PI 183967)cgybcpiB086
CsGy2G012580Silver-seed gourdcarcgybB0115
CsGy2G012580Silver-seed gourdcarcgybB0314
CsGy2G012580Silver-seed gourdcarcgybB0325
CsGy2G012580Cucumber (Chinese Long) v3cgybcucB093
CsGy2G012580Watermelon (97103) v2cgybwmbB105
CsGy2G012580Watermelon (97103) v2cgybwmbB117
CsGy2G012580Wax gourdcgybwgoB175