MELO3C023334.2 (gene) Melon (DHL92) v3.6.1

Overview
NameMELO3C023334.2
Typegene
OrganismCucumis melo (Melon (DHL92) v3.6.1)
Descriptionzinc finger CCHC domain-containing protein 10
Locationchr11 : 1705422 .. 1707135 (+)
Genome Viewer
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonfive_prime_UTRCDSthree_prime_UTR
Hold the cursor over a type above to highlight its positions in the sequence below.
ATTCCATTCGAGATTTTCTACGAACTGGATTTTGCTTAATCTTCAAACCCTAAGGAAGGTATGTACCAACTACGATTCCTTTACTTTCGATTCAATTTCAAGCTTTGAGAGCTGCAAACATTGCCTAATTTTACTCGATCTTTTTGGGATTTTTCCTTTTTCCTTACGGACCAGATCGGTGTTCTATTCCGATTGCGATTTGTTAATAAGAAACGTTAGATTTTTGCTGTGATTATGTTGTTTTAAGCTATACTTTTCTCTGATTTTATTCTAATTCCCTCCCTCCTACTGTAACTATTGGAAACCCTAAATTGATCCTTCCTCTTTTCTTGTTTTTTTGTGTGTTCTTTACTTTTTGTACGATTTATCTGCTCGTAATCTAGGGATTTTTCCTTATGATCTTATTCTTCCAATTTATCTTCCACCTGGGTATTTATTTATATTTAGATGGTGAAGTCATAGAATGATTTATAAGAAGGAAACCTGATAGTTCTTGTTTCGTTTTTCTCGTAATGTCTGTTTGCTCTTAATATCGGTAATTCGTCGCGATACTTTTCTTCAGTTTCTGATCGTTCGTCGTGTGTTTGGATTCAGATATTGAAAAAACAAACCATGTCTAGTAAGAAGGAAGAGAAGTCGCAAGCTGCTGCTGAAAGGATTAAGGCTGCGGCTCTTAGTGCTGCAAAAGGTCTTAGTCGTGCTCAGGCCGAACGAGCAGCTGCGGCTGCTGCTCGGAATGTTAATGCTTATGGGCAGAAGGAAGAAGGGCCTAGCAGATGGCAGGAGAAAAGGGAAGCAAAGAGGCAGATGTATTTGATGAGTACTGAAAAGGCAGTAAGATTGGGTGAAAGAAAAGACATTAAGGGCTCTATGTCTAGTGCTGGTGGAGCTGCTGCACAATGCCAGAAATGTTATCAGATGGGACACTGGACCTACGAATGCAAAAATGAACGAGTTTACATATCTCGTCCATCTCGAACTCAACAACTTAAAAATCCAAAGCTGAGGATGAAGATGGAAGTCTCATTGGAGTTGGACAACCCAGATCCTGGTGAGGAGGAGAAGCCCAAGAAGCATTCGAAGAACAAAAGTAAAAGAAAGCATCGGTCCAATGCAAAATCCGATAGCGATAGTGAGGCCTCTGTGTTTGAGACTGATAGTGGGTCCTCATCAGTTACTGAATCTGATGATTCTTCTGAAGAAAGCAGTTCAGATTACAGTTCTTCATCCGAATCAGAGTGCGAAAGGAGTCGAAGAAGGAGAAAGAAGCAGAAGAGGGGGAGAAGAAAGAGGAGGTACAGTTCGTCTTCTGATTCTTCTGATTCAGACTCAAGGTCTGAATCAGAATCTGATTCCGATAATGAACGCAGTAGGAGGAAGAGCCGACGACACAGCAGAAGACGCTAGTTAAGGTGGATCGAGTGAAGCAGATTAGAATTGTCGATAAATCATGGCAATTGTAGTCAGTTTAGAGATTTGTGTTTCATTCAGTTTCTTGTTTGGGAAGATCTGAAGTTTGGGGTTTCTTTTTTGAGTTTAGCGACTACTTCCTTTCCTTTGTTCTCATCTTATAGCTCTTATGAATGTATAAATTGTTGTTTATGCTTTACTTCTATAACTGTTATGTTTACATATGTTTGTTCTTGAATAAATTAAGGTTAATTGTTAAAGATTGGTGTTGAAATGTGATTATAAAATGAGAAAGATATTAAGA

mRNA sequence

ATTCCATTCGAGATTTTCTACGAACTGGATTTTGCTTAATCTTCAAACCCTAAGGAAGATATTGAAAAAACAAACCATGTCTAGTAAGAAGGAAGAGAAGTCGCAAGCTGCTGCTGAAAGGATTAAGGCTGCGGCTCTTAGTGCTGCAAAAGGTCTTAGTCGTGCTCAGGCCGAACGAGCAGCTGCGGCTGCTGCTCGGAATGTTAATGCTTATGGGCAGAAGGAAGAAGGGCCTAGCAGATGGCAGGAGAAAAGGGAAGCAAAGAGGCAGATGTATTTGATGAGTACTGAAAAGGCAGTAAGATTGGGTGAAAGAAAAGACATTAAGGGCTCTATGTCTAGTGCTGGTGGAGCTGCTGCACAATGCCAGAAATGTTATCAGATGGGACACTGGACCTACGAATGCAAAAATGAACGAGTTTACATATCTCGTCCATCTCGAACTCAACAACTTAAAAATCCAAAGCTGAGGATGAAGATGGAAGTCTCATTGGAGTTGGACAACCCAGATCCTGGTGAGGAGGAGAAGCCCAAGAAGCATTCGAAGAACAAAAGTAAAAGAAAGCATCGGTCCAATGCAAAATCCGATAGCGATAGTGAGGCCTCTGTGTTTGAGACTGATAGTGGGTCCTCATCAGTTACTGAATCTGATGATTCTTCTGAAGAAAGCAGTTCAGATTACAGTTCTTCATCCGAATCAGAGTGCGAAAGGAGTCGAAGAAGGAGAAAGAAGCAGAAGAGGGGGAGAAGAAAGAGGAGGTACAGTTCGTCTTCTGATTCTTCTGATTCAGACTCAAGGTCTGAATCAGAATCTGATTCCGATAATGAACGCAGTAGGAGGAAGAGCCGACGACACAGCAGAAGACGCTAGTTAAGGTGGATCGAGTGAAGCAGATTAGAATTGTCGATAAATCATGGCAATTGTAGTCAGTTTAGAGATTTGTGTTTCATTCAGTTTCTTGTTTGGGAAGATCTGAAGTTTGGGGTTTCTTTTTTGAGTTTAGCGACTACTTCCTTTCCTTTGTTCTCATCTTATAGCTCTTATGAATGTATAAATTGTTGTTTATGCTTTACTTCTATAACTGTTATGTTTACATATGTTTGTTCTTGAATAAATTAAGGTTAATTGTTAAAGATTGGTGTTGAAATGTGATTATAAAATGAGAAAGATATTAAGA

Coding sequence (CDS)

ATGTCTAGTAAGAAGGAAGAGAAGTCGCAAGCTGCTGCTGAAAGGATTAAGGCTGCGGCTCTTAGTGCTGCAAAAGGTCTTAGTCGTGCTCAGGCCGAACGAGCAGCTGCGGCTGCTGCTCGGAATGTTAATGCTTATGGGCAGAAGGAAGAAGGGCCTAGCAGATGGCAGGAGAAAAGGGAAGCAAAGAGGCAGATGTATTTGATGAGTACTGAAAAGGCAGTAAGATTGGGTGAAAGAAAAGACATTAAGGGCTCTATGTCTAGTGCTGGTGGAGCTGCTGCACAATGCCAGAAATGTTATCAGATGGGACACTGGACCTACGAATGCAAAAATGAACGAGTTTACATATCTCGTCCATCTCGAACTCAACAACTTAAAAATCCAAAGCTGAGGATGAAGATGGAAGTCTCATTGGAGTTGGACAACCCAGATCCTGGTGAGGAGGAGAAGCCCAAGAAGCATTCGAAGAACAAAAGTAAAAGAAAGCATCGGTCCAATGCAAAATCCGATAGCGATAGTGAGGCCTCTGTGTTTGAGACTGATAGTGGGTCCTCATCAGTTACTGAATCTGATGATTCTTCTGAAGAAAGCAGTTCAGATTACAGTTCTTCATCCGAATCAGAGTGCGAAAGGAGTCGAAGAAGGAGAAAGAAGCAGAAGAGGGGGAGAAGAAAGAGGAGGTACAGTTCGTCTTCTGATTCTTCTGATTCAGACTCAAGGTCTGAATCAGAATCTGATTCCGATAATGAACGCAGTAGGAGGAAGAGCCGACGACACAGCAGAAGACGCTAG

Protein sequence

MSSKKEEKSQAAAERIKAAALSAAKGLSRAQAERAAAAAARNVNAYGQKEEGPSRWQEKREAKRQMYLMSTEKAVRLGERKDIKGSMSSAGGAAAQCQKCYQMGHWTYECKNERVYISRPSRTQQLKNPKLRMKMEVSLELDNPDPGEEEKPKKHSKNKSKRKHRSNAKSDSDSEASVFETDSGSSSVTESDDSSEESSSDYSSSSESECERSRRRRKKQKRGRRKRRYSSSSDSSDSDSRSESESDSDNERSRRKSRRHSRRR
Homology
[Close]
BLAST of MELO3C023334.2 vs. NCBI nr
Match: XP_008460989.1 (PREDICTED: zinc finger CCHC domain-containing protein 10 [Cucumis melo] >XP_008460988.2 PREDICTED: zinc finger CCHC domain-containing protein 10 [Cucumis melo])

HSP 1 Score: 233.0 bits (593), Expect = 1.1e-57
Identity = 131/131 (100.00%), Postives = 131/131 (100.00%), Query Frame = 0 

Query: 1   MSSKKEEKSQAAAERIKAAALSAAKGLSRAQAXXXXXXXARNVNAYGQKEEGPSRWQEKR 60
           MSSKKEEKSQAAAERIKAAALSAAKGLSRAQAXXXXXXXARNVNAYGQKEEGPSRWQEKR
Sbjct: 1   MSSKKEEKSQAAAERIKAAALSAAKGLSRAQAXXXXXXXARNVNAYGQKEEGPSRWQEKR 60

Query: 61  EAKRQMYLMSTEKAVRLGERKDIKGSMSSAGGAAAQCQKCYQMGHWTYECKNERVYISRP 120
           EAKRQMYLMSTEKAVRLGERKDIKGSMSSAGGAAAQCQKCYQMGHWTYECKNERVYISRP
Sbjct: 61  EAKRQMYLMSTEKAVRLGERKDIKGSMSSAGGAAAQCQKCYQMGHWTYECKNERVYISRP 120

Query: 121 SRTQQLKNPKL 132
           SRTQQLKNPKL
Sbjct: 121 SRTQQLKNPKL 131

[Close]
BLAST of MELO3C023334.2 vs. NCBI nr
Match: XP_011649249.1 (PREDICTED: zinc finger CCHC domain-containing protein 10 [Cucumis sativus] >KGN61833.1 hypothetical protein Csa_2G249870 [Cucumis sativus])

HSP 1 Score: 231.5 bits (589), Expect = 3.3e-57
Identity = 130/131 (99.24%), Postives = 130/131 (99.24%), Query Frame = 0 

Query: 1   MSSKKEEKSQAAAERIKAAALSAAKGLSRAQAXXXXXXXARNVNAYGQKEEGPSRWQEKR 60
           MSSKKEEKSQAAAERIKAAALSAAKGLSRAQAXXXXXXXARNVNAYGQKEEGPSRWQEKR
Sbjct: 1   MSSKKEEKSQAAAERIKAAALSAAKGLSRAQAXXXXXXXARNVNAYGQKEEGPSRWQEKR 60

Query: 61  EAKRQMYLMSTEKAVRLGERKDIKGSMSSAGGAAAQCQKCYQMGHWTYECKNERVYISRP 120
           EAKRQMYLMSTEKAVRLGERKDIKGSMS AGGAAAQCQKCYQMGHWTYECKNERVYISRP
Sbjct: 61  EAKRQMYLMSTEKAVRLGERKDIKGSMSGAGGAAAQCQKCYQMGHWTYECKNERVYISRP 120

Query: 121 SRTQQLKNPKL 132
           SRTQQLKNPKL
Sbjct: 121 SRTQQLKNPKL 131

[Close]
BLAST of MELO3C023334.2 vs. NCBI nr
Match: XP_022138805.1 (zinc finger CCHC domain-containing protein 10 [Momordica charantia])

HSP 1 Score: 228.4 bits (581), Expect = 2.8e-56
Identity = 128/131 (97.71%), Postives = 130/131 (99.24%), Query Frame = 0 

Query: 1   MSSKKEEKSQAAAERIKAAALSAAKGLSRAQAXXXXXXXARNVNAYGQKEEGPSRWQEKR 60
           MSSKKEEKSQAAAERIKAAALSAAKGLSRAQAXXXXXXXARNVNAYGQKEEGPSRWQEKR
Sbjct: 1   MSSKKEEKSQAAAERIKAAALSAAKGLSRAQAXXXXXXXARNVNAYGQKEEGPSRWQEKR 60

Query: 61  EAKRQMYLMSTEKAVRLGERKDIKGSMSSAGGAAAQCQKCYQMGHWTYECKNERVYISRP 120
           EAKRQMYLMSTEKAVRLGERKD+K SMSSAGGAAAQCQKCYQ+GHWTYECKNERVYISRP
Sbjct: 61  EAKRQMYLMSTEKAVRLGERKDLKASMSSAGGAAAQCQKCYQVGHWTYECKNERVYISRP 120

Query: 121 SRTQQLKNPKL 132
           SRTQQLKNPKL
Sbjct: 121 SRTQQLKNPKL 131

[Close]
BLAST of MELO3C023334.2 vs. NCBI nr
Match: XP_022959515.1 (zinc finger CCHC domain-containing protein 10-like [Cucurbita moschata])

HSP 1 Score: 227.3 bits (578), Expect = 6.3e-56
Identity = 122/131 (93.13%), Postives = 122/131 (93.13%), Query Frame = 0 

Query: 1   MSSKKEEKSQAAAERIKAAALSAAKGLSRAQAXXXXXXXARNVNAYGQKEEGPSRWQEKR 60
           MSSKKEEKSQAAAERIKAAALSAAKGLSRAQA       ARNVNAYGQKEEGPSRWQEKR
Sbjct: 1   MSSKKEEKSQAAAERIKAAALSAAKGLSRAQAERAATAAARNVNAYGQKEEGPSRWQEKR 60

Query: 61  EAKRQMYLMSTEKAVRLGERKDIKGSMSSAGGAAAQCQKCYQMGHWTYECKNERVYISRP 120
           EAKRQMYLMSTEKAVRLGERKDIK SMSSAGGAAAQCQKCYQ GHWTYECKNERVYISRP
Sbjct: 61  EAKRQMYLMSTEKAVRLGERKDIKVSMSSAGGAAAQCQKCYQSGHWTYECKNERVYISRP 120

Query: 121 SRTQQLKNPKL 132
           SRTQQLKNPKL
Sbjct: 121 SRTQQLKNPKL 131

[Close]
BLAST of MELO3C023334.2 vs. NCBI nr
Match: XP_023006369.1 (zinc finger CCHC domain-containing protein 10 [Cucurbita maxima] >XP_023006370.1 zinc finger CCHC domain-containing protein 10 [Cucurbita maxima])

HSP 1 Score: 227.3 bits (578), Expect = 6.3e-56
Identity = 122/131 (93.13%), Postives = 122/131 (93.13%), Query Frame = 0 

Query: 1   MSSKKEEKSQAAAERIKAAALSAAKGLSRAQAXXXXXXXARNVNAYGQKEEGPSRWQEKR 60
           MSSKKEEKSQAAAERIKAAALSAAKGLSRAQA       ARNVNAYGQKEEGPSRWQEKR
Sbjct: 1   MSSKKEEKSQAAAERIKAAALSAAKGLSRAQAERAATAAARNVNAYGQKEEGPSRWQEKR 60

Query: 61  EAKRQMYLMSTEKAVRLGERKDIKGSMSSAGGAAAQCQKCYQMGHWTYECKNERVYISRP 120
           EAKRQMYLMSTEKAVRLGERKDIK SMSSAGGAAAQCQKCYQ GHWTYECKNERVYISRP
Sbjct: 61  EAKRQMYLMSTEKAVRLGERKDIKVSMSSAGGAAAQCQKCYQSGHWTYECKNERVYISRP 120

Query: 121 SRTQQLKNPKL 132
           SRTQQLKNPKL
Sbjct: 121 SRTQQLKNPKL 131

[Close]
BLAST of MELO3C023334.2 vs. TAIR10
Match: AT5G49400.1 (zinc knuckle (CCHC-type) family protein)

HSP 1 Score: 193.0 bits (489), Expect = 2.4e-49
Identity = 105/134 (78.36%), Postives = 112/134 (83.58%), Query Frame = 0 

Query: 1   MSSKKEEKSQAAAERIKAAALSAAKGLSRAQAXXXXXXXARNVNAYGQKEEGPSRWQEKR 60
           MS+ K+EKSQ AA+RIKAA L+AAKGLSR QA       ARNVNAYGQKEEGPSRWQEKR
Sbjct: 1   MSNSKDEKSQDAADRIKAATLTAAKGLSRTQAERAAAAAARNVNAYGQKEEGPSRWQEKR 60

Query: 61  EAKRQMYLMSTEKAVRLGERKDIKGSMSSAG---GAAAQCQKCYQMGHWTYECKNERVYI 120
           E KRQMYLMSTEKAVRLGERKD   S S+ G    AA+QCQKC+Q GHWTYECKNERVYI
Sbjct: 61  ELKRQMYLMSTEKAVRLGERKDKTMSASAVGSSASAASQCQKCFQAGHWTYECKNERVYI 120

Query: 121 SRPSRTQQLKNPKL 132
           SRPSRTQQLKNPKL
Sbjct: 121 SRPSRTQQLKNPKL 134

[Close]
BLAST of MELO3C023334.2 vs. Swiss-Prot
Match: sp|Q9CX48|ZCH10_MOUSE (Zinc finger CCHC domain-containing protein 10 OS=Mus musculus OX=10090 GN=Zcchc10 PE=2 SV=1)

HSP 1 Score: 55.8 bits (133), Expect = 8.2e-07
Identity = 21/32 (65.62%), Postives = 26/32 (81.25%), Query Frame = 0 

Query: 96  QCQKCYQMGHWTYECKNERVYISRPSRTQQLK 128
           +CQKC + GHWTYECK +R Y+ RPSRT +LK
Sbjct: 22  RCQKCLEFGHWTYECKGKRKYLHRPSRTAELK 53

[Close]
BLAST of MELO3C023334.2 vs. Swiss-Prot
Match: sp|Q5EB97|ZCH10_RAT (Zinc finger CCHC domain-containing protein 10 OS=Rattus norvegicus OX=10116 GN=Zcchc10 PE=2 SV=2)

HSP 1 Score: 55.8 bits (133), Expect = 8.2e-07
Identity = 21/32 (65.62%), Postives = 26/32 (81.25%), Query Frame = 0 

Query: 96  QCQKCYQMGHWTYECKNERVYISRPSRTQQLK 128
           +CQKC + GHWTYECK +R Y+ RPSRT +LK
Sbjct: 22  RCQKCLEFGHWTYECKGKRKYLHRPSRTAELK 53

[Close]
BLAST of MELO3C023334.2 vs. Swiss-Prot
Match: sp|Q8TBK6|ZCH10_HUMAN (Zinc finger CCHC domain-containing protein 10 OS=Homo sapiens OX=9606 GN=ZCCHC10 PE=1 SV=1)

HSP 1 Score: 54.3 bits (129), Expect = 2.4e-06
Identity = 22/41 (53.66%), Postives = 28/41 (68.29%), Query Frame = 0 

Query: 87  MSSAGGAAAQCQKCYQMGHWTYECKNERVYISRPSRTQQLK 128
           +S A     +CQKC + GHWTYEC  +R Y+ RPSRT +LK
Sbjct: 35  ISEANKQHVRCQKCLEFGHWTYECTGKRKYLHRPSRTAELK 75

[Close]
BLAST of MELO3C023334.2 vs. TrEMBL
Match: tr|A0A1S3CDQ2|A0A1S3CDQ2_CUCME (zinc finger CCHC domain-containing protein 10 OS=Cucumis melo OX=3656 GN=LOC103499707 PE=4 SV=1)

HSP 1 Score: 233.0 bits (593), Expect = 7.6e-58
Identity = 131/131 (100.00%), Postives = 131/131 (100.00%), Query Frame = 0 

Query: 1   MSSKKEEKSQAAAERIKAAALSAAKGLSRAQAXXXXXXXARNVNAYGQKEEGPSRWQEKR 60
           MSSKKEEKSQAAAERIKAAALSAAKGLSRAQAXXXXXXXARNVNAYGQKEEGPSRWQEKR
Sbjct: 1   MSSKKEEKSQAAAERIKAAALSAAKGLSRAQAXXXXXXXARNVNAYGQKEEGPSRWQEKR 60

Query: 61  EAKRQMYLMSTEKAVRLGERKDIKGSMSSAGGAAAQCQKCYQMGHWTYECKNERVYISRP 120
           EAKRQMYLMSTEKAVRLGERKDIKGSMSSAGGAAAQCQKCYQMGHWTYECKNERVYISRP
Sbjct: 61  EAKRQMYLMSTEKAVRLGERKDIKGSMSSAGGAAAQCQKCYQMGHWTYECKNERVYISRP 120

Query: 121 SRTQQLKNPKL 132
           SRTQQLKNPKL
Sbjct: 121 SRTQQLKNPKL 131

[Close]
BLAST of MELO3C023334.2 vs. TrEMBL
Match: tr|A0A0A0LJ33|A0A0A0LJ33_CUCSA (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_2G249870 PE=4 SV=1)

HSP 1 Score: 231.5 bits (589), Expect = 2.2e-57
Identity = 130/131 (99.24%), Postives = 130/131 (99.24%), Query Frame = 0 

Query: 1   MSSKKEEKSQAAAERIKAAALSAAKGLSRAQAXXXXXXXARNVNAYGQKEEGPSRWQEKR 60
           MSSKKEEKSQAAAERIKAAALSAAKGLSRAQAXXXXXXXARNVNAYGQKEEGPSRWQEKR
Sbjct: 1   MSSKKEEKSQAAAERIKAAALSAAKGLSRAQAXXXXXXXARNVNAYGQKEEGPSRWQEKR 60

Query: 61  EAKRQMYLMSTEKAVRLGERKDIKGSMSSAGGAAAQCQKCYQMGHWTYECKNERVYISRP 120
           EAKRQMYLMSTEKAVRLGERKDIKGSMS AGGAAAQCQKCYQMGHWTYECKNERVYISRP
Sbjct: 61  EAKRQMYLMSTEKAVRLGERKDIKGSMSGAGGAAAQCQKCYQMGHWTYECKNERVYISRP 120

Query: 121 SRTQQLKNPKL 132
           SRTQQLKNPKL
Sbjct: 121 SRTQQLKNPKL 131

[Close]
BLAST of MELO3C023334.2 vs. TrEMBL
Match: tr|A0A2H3Z5Z3|A0A2H3Z5Z3_PHODC (zinc finger CCHC domain-containing protein 10 OS=Phoenix dactylifera OX=42345 GN=LOC103720632 PE=4 SV=1)

HSP 1 Score: 219.9 bits (559), Expect = 6.6e-54
Identity = 122/131 (93.13%), Postives = 129/131 (98.47%), Query Frame = 0 

Query: 1   MSSKKEEKSQAAAERIKAAALSAAKGLSRAQAXXXXXXXARNVNAYGQKEEGPSRWQEKR 60
           MSSKKEEK+QAAAERIKAAALSAAKGLSRAQAXXXXXXXARNVNAYGQKEEGPSRWQE++
Sbjct: 1   MSSKKEEKAQAAAERIKAAALSAAKGLSRAQAXXXXXXXARNVNAYGQKEEGPSRWQERK 60

Query: 61  EAKRQMYLMSTEKAVRLGERKDIKGSMSSAGGAAAQCQKCYQMGHWTYECKNERVYISRP 120
           EAKRQMYLMSTEKAVRLGERKD+K S+SSAGGAAAQCQKC+Q GHWTYECKNERVY+SRP
Sbjct: 61  EAKRQMYLMSTEKAVRLGERKDLKASVSSAGGAAAQCQKCFQSGHWTYECKNERVYMSRP 120

Query: 121 SRTQQLKNPKL 132
           SRTQQLKNPKL
Sbjct: 121 SRTQQLKNPKL 131

[Close]
BLAST of MELO3C023334.2 vs. TrEMBL
Match: tr|V4RFM3|V4RFM3_9ROSI (Uncharacterized protein OS=Citrus clementina OX=85681 GN=CICLE_v10005673mg PE=4 SV=1)

HSP 1 Score: 216.9 bits (551), Expect = 5.6e-53
Identity = 120/130 (92.31%), Postives = 124/130 (95.38%), Query Frame = 0 

Query: 1   MSSKKEEKSQAAAERIKAAALSAAKGLSRAQAXXXXXXXARNVNAYGQKEEGPSRWQEKR 60
           MSSKKEEK QAAAERIKAAALSAAKGLSRAQA XXXXXXARNVNAYGQKEEGPSRWQEKR
Sbjct: 1   MSSKKEEKGQAAAERIKAAALSAAKGLSRAQAEXXXXXXARNVNAYGQKEEGPSRWQEKR 60

Query: 61  EAKRQMYLMSTEKAVRLGERKDIKGSMSSAGGAAAQCQKCYQMGHWTYECKNERVYISRP 120
           EAKRQMYLMSTEKAVRLGERKDIK +MSS GG A+QCQKC+Q GHWTYECKNERVY+SRP
Sbjct: 61  EAKRQMYLMSTEKAVRLGERKDIKSTMSSVGGGASQCQKCFQTGHWTYECKNERVYMSRP 120

Query: 121 SRTQQLKNPK 131
           SRTQQLKNPK
Sbjct: 121 SRTQQLKNPK 130

[Close]
BLAST of MELO3C023334.2 vs. TrEMBL
Match: tr|A0A2H5N688|A0A2H5N688_CITUN (Uncharacterized protein OS=Citrus unshiu OX=55188 GN=CUMW_018130 PE=4 SV=1)

HSP 1 Score: 216.9 bits (551), Expect = 5.6e-53
Identity = 120/130 (92.31%), Postives = 124/130 (95.38%), Query Frame = 0 

Query: 1   MSSKKEEKSQAAAERIKAAALSAAKGLSRAQAXXXXXXXARNVNAYGQKEEGPSRWQEKR 60
           MSSKKEEK QAAAERIKAAALSAAKGLSRAQA XXXXXXARNVNAYGQKEEGPSRWQEKR
Sbjct: 1   MSSKKEEKGQAAAERIKAAALSAAKGLSRAQAEXXXXXXARNVNAYGQKEEGPSRWQEKR 60

Query: 61  EAKRQMYLMSTEKAVRLGERKDIKGSMSSAGGAAAQCQKCYQMGHWTYECKNERVYISRP 120
           EAKRQMYLMSTEKAVRLGERKDIK +MSS GG A+QCQKC+Q GHWTYECKNERVY+SRP
Sbjct: 61  EAKRQMYLMSTEKAVRLGERKDIKSTMSSVGGGASQCQKCFQTGHWTYECKNERVYMSRP 120

Query: 121 SRTQQLKNPK 131
           SRTQQLKNPK
Sbjct: 121 SRTQQLKNPK 130

The following BLAST results are available for this feature:
BLAST of MELO3C023334.2 vs. NCBI nr
Match NameE-valueIdentityDescription
XP_008460989.11.1e-57100.00PREDICTED: zinc finger CCHC domain-containing protein 10 [Cucumis melo] >XP_0084... [more]
XP_011649249.13.3e-5799.24PREDICTED: zinc finger CCHC domain-containing protein 10 [Cucumis sativus] >KGN6... [more]
XP_022138805.12.8e-5697.71zinc finger CCHC domain-containing protein 10 [Momordica charantia][more]
XP_022959515.16.3e-5693.13zinc finger CCHC domain-containing protein 10-like [Cucurbita moschata][more]
XP_023006369.16.3e-5693.13zinc finger CCHC domain-containing protein 10 [Cucurbita maxima] >XP_023006370.1... [more]
BLAST of MELO3C023334.2 vs. TAIR10
Match NameE-valueIdentityDescription
AT5G49400.12.4e-4978.36zinc knuckle (CCHC-type) family protein[more]
BLAST of MELO3C023334.2 vs. Swiss-Prot
Match NameE-valueIdentityDescription
sp|Q9CX48|ZCH10_MOUSE8.2e-0765.63Zinc finger CCHC domain-containing protein 10 OS=Mus musculus OX=10090 GN=Zcchc1... [more]
sp|Q5EB97|ZCH10_RAT8.2e-0765.63Zinc finger CCHC domain-containing protein 10 OS=Rattus norvegicus OX=10116 GN=Z... [more]
sp|Q8TBK6|ZCH10_HUMAN2.4e-0653.66Zinc finger CCHC domain-containing protein 10 OS=Homo sapiens OX=9606 GN=ZCCHC10... [more]
BLAST of MELO3C023334.2 vs. TrEMBL
Match NameE-valueIdentityDescription
tr|A0A1S3CDQ2|A0A1S3CDQ2_CUCME7.6e-58100.00zinc finger CCHC domain-containing protein 10 OS=Cucumis melo OX=3656 GN=LOC1034... [more]
tr|A0A0A0LJ33|A0A0A0LJ33_CUCSA2.2e-5799.24Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_2G249870 PE=4 SV=1[more]
tr|A0A2H3Z5Z3|A0A2H3Z5Z3_PHODC6.6e-5493.13zinc finger CCHC domain-containing protein 10 OS=Phoenix dactylifera OX=42345 GN... [more]
tr|V4RFM3|V4RFM3_9ROSI5.6e-5392.31Uncharacterized protein OS=Citrus clementina OX=85681 GN=CICLE_v10005673mg PE=4 ... [more]
tr|A0A2H5N688|A0A2H5N688_CITUN5.6e-5392.31Uncharacterized protein OS=Citrus unshiu OX=55188 GN=CUMW_018130 PE=4 SV=1[more]
Annotated Terms
The following terms have been associated with this gene:
Vocabulary: Molecular Function
TermDefinition
GO:0008270zinc ion binding
GO:0003676nucleic acid binding
Vocabulary: INTERPRO
TermDefinition
IPR036875Znf_CCHC_sf
GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
Category Term Accession Term Name
biological_process GO:0008150 biological_process
cellular_component GO:0005575 cellular_component
molecular_function GO:0003676 nucleic acid binding
molecular_function GO:0008270 zinc ion binding
Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
MELO3C023334.2.1MELO3C023334.2.1mRNA


InterPro
Analysis Name: InterPro Annotations of melon v3.6.1
Date Performed: 2018-09-25
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availablePFAMPF13917zf-CCHC_3coord: 93..129
e-value: 2.0E-20
score: 72.3
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 119..264
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 133..155
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 172..206
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 229..254
NoneNo IPR availablePANTHERPTHR13491ZCCHC10 PROTEINcoord: 46..225
IPR036875Zinc finger, CCHC-type superfamilySUPERFAMILYSSF57756Retrovirus zinc finger-like domainscoord: 81..113

Synteny
The following gene(s) are orthologous to this gene:
GeneOrthologueOrganismBlock
MELO3C023334.2Csa2G249870Cucumber (Chinese Long) v2cumedB081
MELO3C023334.2CSPI02G12560Wild cucumber (PI 183967)cpimedB081
MELO3C023334.2Cucsa.109310Cucumber (Gy14) v1cgymedB148
MELO3C023334.2CsGy2G012580Cucumber (Gy14) v2cgybmedB074
MELO3C023334.2CsaV3_2G015100Cucumber (Chinese Long) v3cucmedB089
The following gene(s) are paralogous to this gene:

None

The following block(s) are covering this gene:
GeneOrganismBlock
MELO3C023334.2Cucumber (Gy14) v2cgybmedB449
MELO3C023334.2Cucumber (Gy14) v1cgymedB608
MELO3C023334.2Cucurbita maxima (Rimu)cmamedB580
MELO3C023334.2Cucurbita maxima (Rimu)cmamedB628
MELO3C023334.2Cucurbita moschata (Rifu)cmomedB568
MELO3C023334.2Cucurbita moschata (Rifu)cmomedB617
MELO3C023334.2Cucurbita pepo (Zucchini)cpemedB253
MELO3C023334.2Cucurbita pepo (Zucchini)cpemedB293
MELO3C023334.2Cucurbita pepo (Zucchini)cpemedB786
MELO3C023334.2Wild cucumber (PI 183967)cpimedB263
MELO3C023334.2Wild cucumber (PI 183967)cpimedB503
MELO3C023334.2Cucumber (Chinese Long) v2cumedB263
MELO3C023334.2Cucumber (Chinese Long) v2cumedB493
MELO3C023334.2Melon (DHL92) v3.6.1medmedB041
MELO3C023334.2Bottle gourd (USVL1VR-Ls)lsimedB047
MELO3C023334.2Bottle gourd (USVL1VR-Ls)lsimedB090
MELO3C023334.2Bottle gourd (USVL1VR-Ls)lsimedB448
MELO3C023334.2Watermelon (Charleston Gray)medwcgB106
MELO3C023334.2Watermelon (Charleston Gray)medwcgB080
MELO3C023334.2Watermelon (97103) v1medwmB124
MELO3C023334.2Watermelon (97103) v1medwmB130
MELO3C023334.2Silver-seed gourdcarmedB0111
MELO3C023334.2Silver-seed gourdcarmedB0314
MELO3C023334.2Silver-seed gourdcarmedB0329
MELO3C023334.2Cucumber (Chinese Long) v3cucmedB518
MELO3C023334.2Watermelon (97103) v2medwmbB082
MELO3C023334.2Watermelon (97103) v2medwmbB105
MELO3C023334.2Wax gourdmedwgoB133