CsGy2G003680 (gene) Cucumber (Gy14) v2 | Cucurbit Genomics Database (CuGenDB)

Overview


Name	CsGy2G003680
Type	gene
Organism	Cucumis sativus (Cucumber (Gy14) v2)
Description	Photosystem II reaction center PsbP family protein
Location	Chr2 : 2499866 .. 2503831 (-)

Genome Viewer

Gene Expression

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: CDSexonthree_prime_UTR

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGGCCATTCCTCTTTCTTTATGCATCCACCACCCTCCAAACCCTCACCAAAACCCCACGTCCCCCGTCCCTCCCCCCACCACCCTCTGCTTTCCGGCGCCTACTTCTTTGAATTCCAAATCCAAGAGGCATTTCATCCTCAAAACAGCTTCACTCTGTCTAATTTCTTTCATTCCAAAATGCCCAGTTGTTCAATCTTCTGAAAATTCTCCAACTTCGAAACCTGGCCTTCCTGCTATAGCAAACACCAAGTCTTGGTTTCAGTTCTATGGCGATGGGTTTTCCATTCGGGTGCCTCCTCAGTTTGAAGACCTCACGGAACCTGAGGTATAGACAAAATTACGCTCGATGTTTGATTTGTATGAAATGAAACATTGTTTATCTTAGCCTTTGCTACTTTCTTGCTCAACTTATTTCTGTTTGTTTAATCCTAGTGTTTATGTTATGTTTACGTACACCAATATGAATACTTCAAGGTTATCCATATGCTTATTTGCTATCAGTGTTTTTTAAAGCTATAGAGCAGTAAAGCATAATAGTTTGTTGAGGATGAAGTGCAAGGTGCAAACCTTTTCAAAGCGTAATAGTTACTACCACTGTTTTTTCAAGGTGGAAAAGGTGTGCACCTAATGCGGGCCTTACTTTGTGAGCAAACCTTTTCAAGGCGAGGCATAATACTTGTGCCTAATGCCTAGGAGTGTGCCCGGTAGGGGTTTTTAGAACACTGTTTGCTATTGGTGTCAATGGTATCAAGTAGAAGGTTGTAGCTTTAGGGCTTTGATAACCTCGTAATGTGCGTGTGCACTCACTTTCTTTTTTCTCTTTCGTGGAACATTTAGCTTGAAGGAAATAAGTAGGTTCAACACCACCCTTTCGTTTATGCATTCTTGTAGCTATTCTTTATCTTTTATCCTCTGGAGCCCTTTCTTGTACTTGTAAAAAGTTTATCATTTGCAGCTTGCTAAGTTATGTGCTTGGAGTTTGTAGGACTATAGTGCTGGACTCTCTCTTTATGGAGATAAGGCTAAAACAAAAACCTTTGCAGCACGGTTCGGGTCTCCTGATGGGTAATGATATTCCCTTTTGTTCATATTCTTTGTTCTAACTTGTATTTTGCTTCTAGGTAGGATGAAGAATTTGAGTTAGGTCAATTGACCTAGGTATACTAAAGTTGTGCCTTTGTAAAAAGTTCAATTTATTTATTTTTGAACTTTCTCATATCCTCATTTTCTTCTATCCTTTTCTGCTTTGTTGCTCATCGCAGCTCTGAAGTTCTAAGTGTTGTCACTCGTCCAACGAATCAACTTAAGATCACCTTTCTAGAGGTAGCACAATGATGGTTGTGAAGTTTTCAAGTCTTATGACCAAAATGCCCAACATTCATTTTGTAATGCATCTAACTGGTTCTCTGATACCTGTCTTCTTTTTCCTAATCTTTTGGTAATTCAGAAGGGGATTGGCTTCTTACTAAACATTATATATCTTGCAACTCTTTCTAAACTTGGTGGCTCTTTCATATCCAGAAGCTCTACCTAGAGAAAATCCCAAAATGAAGTTTTAAAATGTCTAGCAATGTTTTGGACTCTTGGACCTTTTAGGTCCAAGAGAATTCCTTTAATCTGAGTATCTCAAAGAGTTTTTTGAAGTTGCTCATCATGAACGTTTATAAGAAGATTTCGTTTAGTTCGAACTTCTATGTACATGCTTGTTTAGTTATGCTTATTTTTTATGGACAACTGTTTTAGGAGCTTCCATTCTTACTTGCAAAAAACAGGCGAAAGACATAACTGATATAGGTTCCTTGAGGGAGGCTGCAAAAATCTTTGTTCCAGGTACAGATTGTCTTTCTCTTTCATATTTTGGGTTCAATATGCAAAGTAACTTTTTTGGGATTTTTTCTTGTCATTTTGGTTTTTAATTATTTGGTTCTTTTGCTATTTTCTCATCTTCCCTTAGACACACATCTCATTCTAGCTATTGATTTTAGTGTTCTGACAATGATAGGCGGTTCAACTTTATTTTCTGCCCGAACGTTTAAAATTAAGGAAGATGAAGGCTTCAGGTAATTATGCTACGATGATGCTGTTTGTATATACAAAAATGTTAGTTTGAGATCATAATATTCTTAGTTAGTTCATTTAGATATTACATGTCATATGTTCACCAAGGATATGTTGCATTTTAATACATAGCTCCTTGATATGTGAGCGACTATGATAGAATATATTTTTTATTCCCGAAACTTCTCAGATTTATTATGAAATAAATACTGTAATTTAATGATGACGTGGTCTGTAAGAGCCAATGCACATGATAAAAAGCTTGATTGAATGAGTTCAAGCGATGGTAACCATCTACTTAAGATTTAGTATTTTATAAGTTTTCTTGGCATCGAGTTATGTTAGGAGGTTAGACAATTACTATGTGAGAATAGTCTAGTTGAAGTATGTGCGAACTGCCCTCTCCTAGACACTTGATAATTTTAAAAATGTTATGAAACAATAATATTTATCAAAAGTAGGCAGCTGTGAATACTTTGTTTCAGTCTTCTTTGGCTATATTAACTTTCATATTTTCATTCCATTGCCTCTGTTTCTTTAACTTCAGGACTTATTACTTCTACGAGTTTGGGAAGAACGAACAACATGTTGCATTAGTAGCAACTGTTAATAGTGGACAGGTTTGTGATATACAATTTACACTACACAAATACAAGCTAAACTTCTTACTCTGATTAAGACCTGAGTTATAACATGGTAGAATTTGTATAAACATTAATTGATTCAAAGCTAAACTGTTCATGTTAGCAAAGTCTTATTATTTTATATGTTGAATATGGCAAACGTAACTTTAGAATTCTGAGTTCTGCTCGAAGATTATGTTGGTCAAAATTTCTCATTCAACACAGCTTTCATTTTGACATTGTGCTTCTTTGTGATAGGTGTTTGTTGCTGGAGCAACTGCACCATTGTCCAAATGGGATGAAGATGGCATCAAACTCCGTTCTGCTGCTATATCTTTAACAGTGTTATAATCAATTGTTGATAAATTTCATTTCATTAGCTTGTGAGTACTCCCTAAGATTTAGCTCTCATGTATTTGATAGCATATAAAATAAAGGACTATAATCTAGGCTAAAATCTTTGTAATCTAGACTAAAATTTTTGTAATTGTGAGCATGAAATGAAATTCCATTTAATATAACTAGGTCTTTTTGTAACTATGATCTTAATTTGATTTTGTTGCATTGTCTTGGAGTTCCTTCTTGTAGTTTGTCGAGGTTTTTTTTTCTTGTTTGGATAGTTTTTGTTGTAGGTGCTTACACTTTTCTCAATGAAAGCTCGGTTTTTTAAAAAATAAAGAAAGAAAAAATTTATTTAAGATCCCATTGATGTTTCTGTTGACACAAGTTAAAGTTTGATTTTTTCTTATGCAAATACTGAAATGATCTTTGAATGTTCAGATTGGTCTTCAGATTGTTTCAACTTAATTTGTGAGAGTTATTTGATTGTGTTTGATCCTTCAATCTTTTTGATGGACAGGAGGAAGCTTGTGGTGAGTTCTCTATTTAGCAACGAGACAACTCTAGCTGAAGATAAAATTTAGACTTTGTATAGAATTTCCCACTCTTTTTTTTGGTGGTTGTTGTAAGAATTGTGTTTTGTAGTTGCTATGCAGAGTGATACTTGGTTCATGTGGTTTTTCATTTCATCATTTCTTTTGTTTTTATACGGTTTTGTCGAACTAAAAACTTGAGATTATTGGAAGTGGCAACTGGTCTCAATGGGACTACCACTCATTGAATGCATCGTTCAATTTATGTTCTTTTTGTCTTTTGATTAGCACTAGTTAAAATTTCATGGAACACATCACTTTACAATCACATGGACAGTTGGCCTTCCTCTCTGTGATTTAGCTAATGGATCAATTTTATCTTTTTGAGAAAGGATGTTCATGGTTTGGTAG

mRNA sequence

ATGGCCATTCCTCTTTCTTTATGCATCCACCACCCTCCAAACCCTCACCAAAACCCCACGTCCCCCGTCCCTCCCCCCACCACCCTCTGCTTTCCGGCGCCTACTTCTTTGAATTCCAAATCCAAGAGGCATTTCATCCTCAAAACAGCTTCACTCTGTCTAATTTCTTTCATTCCAAAATGCCCAGTTGTTCAATCTTCTGAAAATTCTCCAACTTCGAAACCTGGCCTTCCTGCTATAGCAAACACCAAGTCTTGGTTTCAGTTCTATGGCGATGGGTTTTCCATTCGGGTGCCTCCTCAGTTTGAAGACCTCACGGAACCTGAGGACTATAGTGCTGGACTCTCTCTTTATGGAGATAAGGCTAAAACAAAAACCTTTGCAGCACGGTTCGGGTCTCCTGATGGCTCTGAAGTTCTAAGTGTTGTCACTCGTCCAACGAATCAACTTAAGATCACCTTTCTAGAGGCGAAAGACATAACTGATATAGGTTCCTTGAGGGAGGCTGCAAAAATCTTTGTTCCAGGCGGTTCAACTTTATTTTCTGCCCGAACGTTTAAAATTAAGGAAGATGAAGGCTTCAGGACTTATTACTTCTACGAGTTTGGGAAGAACGAACAACATGTTGCATTAGTAGCAACTGTTAATAGTGGACAGGTGTTTGTTGCTGGAGCAACTGCACCATTGTCCAAATGGGATGAAGATGGCATCAAACTCCGTTCTGCTGCTATATCTTTAACAGTGTTATAATCAATTGTTGATAAATTTCATTTCATTAGCTTGAGGAAGCTTGTGGTGAGTTCTCTATTTAGCAACGAGACAACTCTAGCTGAAGATAAAATTTAGACTTTGTATAGAATTTCCCACTCTTTTTTTTGGTGGTTGTTGTAAGAATTGTGTTTTGTAGTTGCTATGCAGAGTGATACTTGGTTCATGTGGTTTTTCATTTCATCATTTCTTTTGTTTTTATACGGTTTTGTCGAACTAAAAACTTGAGATTATTGGAAGTGGCAACTGGTCTCAATGGGACTACCACTCATTGAATGCATCGTTCAATTTATGTTCTTTTTGTCTTTTGATTAGCACTAGTTAAAATTTCATGGAACACATCACTTTACAATCACATGGACAGTTGGCCTTCCTCTCTGTGATTTAGCTAATGGATCAATTTTATCTTTTTGAGAAAGGATGTTCATGGTTTGGTAG

Coding sequence (CDS)

ATGGCCATTCCTCTTTCTTTATGCATCCACCACCCTCCAAACCCTCACCAAAACCCCACGTCCCCCGTCCCTCCCCCCACCACCCTCTGCTTTCCGGCGCCTACTTCTTTGAATTCCAAATCCAAGAGGCATTTCATCCTCAAAACAGCTTCACTCTGTCTAATTTCTTTCATTCCAAAATGCCCAGTTGTTCAATCTTCTGAAAATTCTCCAACTTCGAAACCTGGCCTTCCTGCTATAGCAAACACCAAGTCTTGGTTTCAGTTCTATGGCGATGGGTTTTCCATTCGGGTGCCTCCTCAGTTTGAAGACCTCACGGAACCTGAGGACTATAGTGCTGGACTCTCTCTTTATGGAGATAAGGCTAAAACAAAAACCTTTGCAGCACGGTTCGGGTCTCCTGATGGCTCTGAAGTTCTAAGTGTTGTCACTCGTCCAACGAATCAACTTAAGATCACCTTTCTAGAGGCGAAAGACATAACTGATATAGGTTCCTTGAGGGAGGCTGCAAAAATCTTTGTTCCAGGCGGTTCAACTTTATTTTCTGCCCGAACGTTTAAAATTAAGGAAGATGAAGGCTTCAGGACTTATTACTTCTACGAGTTTGGGAAGAACGAACAACATGTTGCATTAGTAGCAACTGTTAATAGTGGACAGGTGTTTGTTGCTGGAGCAACTGCACCATTGTCCAAATGGGATGAAGATGGCATCAAACTCCGTTCTGCTGCTATATCTTTAACAGTGTTATAA

Protein sequence

MAIPLSLCIHHPPNPHQNPTSPVPPPTTLCFPAPTSLNSKSKRHFILKTASLCLISFIPKCPVVQSSENSPTSKPGLPAIANTKSWFQFYGDGFSIRVPPQFEDLTEPEDYSAGLSLYGDKAKTKTFAARFGSPDGSEVLSVVTRPTNQLKITFLEAKDITDIGSLREAAKIFVPGGSTLFSARTFKIKEDEGFRTYYFYEFGKNEQHVALVATVNSGQVFVAGATAPLSKWDEDGIKLRSAAISLTVL

Homology

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BLAST of CsGy2G003680 vs. NCBI nr
Match: XP_004139199.1 (PREDICTED: uncharacterized protein LOC101214471 [Cucumis sativus] >KGN60867.1 hypothetical protein Csa_2G020900 [Cucumis sativus])

HSP 1 Score: 503.1 bits (1294), Expect = 5.6e-139
Identity = 249/249 (100.00%), Postives = 249/249 (100.00%), Query Frame = 0


Query: 1   MAIPLSLCIHHPPNPHQNPTSPVPPPTTLCFPAPTSLNSKSKRHFILKTASLCLISFIPK 60
           MAIPLSLCIHHPPNPHQNPTSPVPPPTTLCFPAPTSLNSKSKRHFILKTASLCLISFIPK
Sbjct: 1   MAIPLSLCIHHPPNPHQNPTSPVPPPTTLCFPAPTSLNSKSKRHFILKTASLCLISFIPK 60

Query: 61  CPVVQSSENSPTSKPGLPAIANTKSWFQFYGDGFSIRVPPQFEDLTEPEDYSAGLSLYGD 120
           CPVVQSSENSPTSKPGLPAIANTKSWFQFYGDGFSIRVPPQFEDLTEPEDYSAGLSLYGD
Sbjct: 61  CPVVQSSENSPTSKPGLPAIANTKSWFQFYGDGFSIRVPPQFEDLTEPEDYSAGLSLYGD 120

Query: 121 KAKTKTFAARFGSPDGSEVLSVVTRPTNQLKITFLEAKDITDIGSLREAAKIFVPGGSTL 180
           KAKTKTFAARFGSPDGSEVLSVVTRPTNQLKITFLEAKDITDIGSLREAAKIFVPGGSTL
Sbjct: 121 KAKTKTFAARFGSPDGSEVLSVVTRPTNQLKITFLEAKDITDIGSLREAAKIFVPGGSTL 180

Query: 181 FSARTFKIKEDEGFRTYYFYEFGKNEQHVALVATVNSGQVFVAGATAPLSKWDEDGIKLR 240
           FSARTFKIKEDEGFRTYYFYEFGKNEQHVALVATVNSGQVFVAGATAPLSKWDEDGIKLR
Sbjct: 181 FSARTFKIKEDEGFRTYYFYEFGKNEQHVALVATVNSGQVFVAGATAPLSKWDEDGIKLR 240

Query: 241 SAAISLTVL 250
           SAAISLTVL
Sbjct: 241 SAAISLTVL 249

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BLAST of CsGy2G003680 vs. NCBI nr
Match: XP_008455075.1 (PREDICTED: uncharacterized protein LOC103495336 isoform X1 [Cucumis melo])

HSP 1 Score: 489.2 bits (1258), Expect = 8.4e-135
Identity = 241/249 (96.79%), Postives = 246/249 (98.80%), Query Frame = 0


Query: 1   MAIPLSLCIHHPPNPHQNPTSPVPPPTTLCFPAPTSLNSKSKRHFILKTASLCLISFIPK 60
           MAIPLSLC+HHPPNPHQNPTS VPPPTT+CFPA ++LNS+SKRHFILKTASLCLISF PK
Sbjct: 1   MAIPLSLCLHHPPNPHQNPTSAVPPPTTVCFPASSTLNSQSKRHFILKTASLCLISFFPK 60

Query: 61  CPVVQSSENSPTSKPGLPAIANTKSWFQFYGDGFSIRVPPQFEDLTEPEDYSAGLSLYGD 120
           CPVVQSSENSPTSKPGLPAIANTKSWFQFYGDGFSIRVPPQFEDLTEPEDYSAGLSLYGD
Sbjct: 61  CPVVQSSENSPTSKPGLPAIANTKSWFQFYGDGFSIRVPPQFEDLTEPEDYSAGLSLYGD 120

Query: 121 KAKTKTFAARFGSPDGSEVLSVVTRPTNQLKITFLEAKDITDIGSLREAAKIFVPGGSTL 180
           KAKTKTFAARFGSPDGSEVLSVVTRPTNQLKITFLEAKDITDIGSLREAAKIFVPGGSTL
Sbjct: 121 KAKTKTFAARFGSPDGSEVLSVVTRPTNQLKITFLEAKDITDIGSLREAAKIFVPGGSTL 180

Query: 181 FSARTFKIKEDEGFRTYYFYEFGKNEQHVALVATVNSGQVFVAGATAPLSKWDEDGIKLR 240
           FSARTFKIKEDEGFRTYYFYEFGKNEQHVALVATVNSGQVFVAGATAPLSKWDEDGIKLR
Sbjct: 181 FSARTFKIKEDEGFRTYYFYEFGKNEQHVALVATVNSGQVFVAGATAPLSKWDEDGIKLR 240

Query: 241 SAAISLTVL 250
           SAAISLTVL
Sbjct: 241 SAAISLTVL 249

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BLAST of CsGy2G003680 vs. NCBI nr
Match: XP_023521934.1 (uncharacterized protein LOC111785779 [Cucurbita pepo subsp. pepo] >XP_023521935.1 uncharacterized protein LOC111785779 [Cucurbita pepo subsp. pepo] >XP_023545472.1 uncharacterized protein LOC111804892 isoform X1 [Cucurbita pepo subsp. pepo] >XP_023545473.1 uncharacterized protein LOC111804892 isoform X1 [Cucurbita pepo subsp. pepo] >XP_023545474.1 uncharacterized protein LOC111804892 isoform X1 [Cucurbita pepo subsp. pepo] >XP_023545475.1 uncharacterized protein LOC111804892 isoform X1 [Cucurbita pepo subsp. pepo])

HSP 1 Score: 439.1 bits (1128), Expect = 9.9e-120
Identity = 221/249 (88.76%), Postives = 232/249 (93.17%), Query Frame = 0


Query: 1   MAIPLSLCIHHPPNPHQNPTSPVPPPTTLCFPAPTSLNSKSKRHFILKTASLCLISFIPK 60
           MA+ LSLC+ HPPN  QNPT+ VP PTT+ F  PTSLNS SKRHFILKTASLCLIS IPK
Sbjct: 1   MALLLSLCL-HPPNLQQNPTAAVPHPTTVGFHEPTSLNSNSKRHFILKTASLCLISLIPK 60

Query: 61  CPVVQSSENSPTSKPGLPAIANTKSWFQFYGDGFSIRVPPQFEDLTEPEDYSAGLSLYGD 120
           CPV QSS+ SPTSK GLP +ANTKSWFQFYGDGFSIRVPPQFEDLTEPED++AGLSLYGD
Sbjct: 61  CPVAQSSQISPTSKQGLPGLANTKSWFQFYGDGFSIRVPPQFEDLTEPEDFNAGLSLYGD 120

Query: 121 KAKTKTFAARFGSPDGSEVLSVVTRPTNQLKITFLEAKDITDIGSLREAAKIFVPGGSTL 180
           K KTKTFAARFGSPDGSEVLSVVTRPTNQLKITFLEAKDITDIGSLREAAKIFVPGG+TL
Sbjct: 121 KVKTKTFAARFGSPDGSEVLSVVTRPTNQLKITFLEAKDITDIGSLREAAKIFVPGGATL 180

Query: 181 FSARTFKIKEDEGFRTYYFYEFGKNEQHVALVATVNSGQVFVAGATAPLSKWDEDGIKLR 240
           FSARTFKIK+DEGFRTYYFYEFGKNE+HVALVATVNSGQ FVAGATAPLSKWDEDGIKLR
Sbjct: 181 FSARTFKIKDDEGFRTYYFYEFGKNEEHVALVATVNSGQAFVAGATAPLSKWDEDGIKLR 240

Query: 241 SAAISLTVL 250
           SAAISLTVL
Sbjct: 241 SAAISLTVL 248

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BLAST of CsGy2G003680 vs. NCBI nr
Match: XP_022946291.1 (uncharacterized protein LOC111450417 isoform X2 [Cucurbita moschata])

HSP 1 Score: 438.0 bits (1125), Expect = 2.2e-119
Identity = 220/249 (88.35%), Postives = 232/249 (93.17%), Query Frame = 0


Query: 1   MAIPLSLCIHHPPNPHQNPTSPVPPPTTLCFPAPTSLNSKSKRHFILKTASLCLISFIPK 60
           MA+ LSLC+ HPPN  QNPT+ VP PTT+ F  PT+LNS SKRHFILKTASLCLIS IPK
Sbjct: 1   MALLLSLCL-HPPNLQQNPTAAVPHPTTVGFHEPTTLNSNSKRHFILKTASLCLISLIPK 60

Query: 61  CPVVQSSENSPTSKPGLPAIANTKSWFQFYGDGFSIRVPPQFEDLTEPEDYSAGLSLYGD 120
           CPV QSS+ SPTSK GLP +ANTKSWFQFYGDGFSIRVPPQFEDLTEPED++AGLSLYGD
Sbjct: 61  CPVAQSSQISPTSKQGLPGLANTKSWFQFYGDGFSIRVPPQFEDLTEPEDFNAGLSLYGD 120

Query: 121 KAKTKTFAARFGSPDGSEVLSVVTRPTNQLKITFLEAKDITDIGSLREAAKIFVPGGSTL 180
           K KTKTFAARFGSPDGSEVLSVVTRPTNQLKITFLEAKDITDIGSLREAAKIFVPGG+TL
Sbjct: 121 KVKTKTFAARFGSPDGSEVLSVVTRPTNQLKITFLEAKDITDIGSLREAAKIFVPGGATL 180

Query: 181 FSARTFKIKEDEGFRTYYFYEFGKNEQHVALVATVNSGQVFVAGATAPLSKWDEDGIKLR 240
           FSARTFKIK+DEGFRTYYFYEFGKNE+HVALVATVNSGQ FVAGATAPLSKWDEDGIKLR
Sbjct: 181 FSARTFKIKDDEGFRTYYFYEFGKNEEHVALVATVNSGQAFVAGATAPLSKWDEDGIKLR 240

Query: 241 SAAISLTVL 250
           SAAISLTVL
Sbjct: 241 SAAISLTVL 248

[Close]

BLAST of CsGy2G003680 vs. NCBI nr
Match: XP_022999130.1 (uncharacterized protein LOC111493605 isoform X2 [Cucurbita maxima] >XP_022999131.1 uncharacterized protein LOC111493605 isoform X2 [Cucurbita maxima])

HSP 1 Score: 433.7 bits (1114), Expect = 4.2e-118
Identity = 217/245 (88.57%), Postives = 229/245 (93.47%), Query Frame = 0


Query: 5   LSLCIHHPPNPHQNPTSPVPPPTTLCFPAPTSLNSKSKRHFILKTASLCLISFIPKCPVV 64
           LSLC+ HPPN  QNPT+ VP PTT+ F  PT+LNS SKRHFILK+ASLCLIS IPKCPV 
Sbjct: 4   LSLCL-HPPNLQQNPTAAVPHPTTVGFHEPTTLNSNSKRHFILKSASLCLISLIPKCPVA 63

Query: 65  QSSENSPTSKPGLPAIANTKSWFQFYGDGFSIRVPPQFEDLTEPEDYSAGLSLYGDKAKT 124
           QSS+ SPTSK GLP +ANTKSWFQFYGDGFSIRVPPQFEDLTEPED++AGLSLYGDK KT
Sbjct: 64  QSSQISPTSKQGLPGLANTKSWFQFYGDGFSIRVPPQFEDLTEPEDFNAGLSLYGDKVKT 123

Query: 125 KTFAARFGSPDGSEVLSVVTRPTNQLKITFLEAKDITDIGSLREAAKIFVPGGSTLFSAR 184
           KTFAARFGSPDGSEVLSVVTRPTNQLKITFLEAKDITDIGSLREAAKIFVPGG+TLFSAR
Sbjct: 124 KTFAARFGSPDGSEVLSVVTRPTNQLKITFLEAKDITDIGSLREAAKIFVPGGATLFSAR 183

Query: 185 TFKIKEDEGFRTYYFYEFGKNEQHVALVATVNSGQVFVAGATAPLSKWDEDGIKLRSAAI 244
           TFKIK+DEGFRTYYFYEFGKNE+HVALVATVNSGQ FVAGATAPLSKWDEDGIKLRSAAI
Sbjct: 184 TFKIKDDEGFRTYYFYEFGKNEEHVALVATVNSGQAFVAGATAPLSKWDEDGIKLRSAAI 243

Query: 245 SLTVL 250
           SLTVL
Sbjct: 244 SLTVL 247

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BLAST of CsGy2G003680 vs. TAIR10
Match: AT5G27390.1 (Mog1/PsbP/DUF1795-like photosystem II reaction center PsbP family protein)

HSP 1 Score: 292.4 bits (747), Expect = 2.7e-79
Identity = 150/250 (60.00%), Postives = 192/250 (76.80%), Query Frame = 0


Query: 1   MAIPLSLCIHHPPNPHQNPTSPVPPPTTLCFPAPTSLNSKSKRHFILKTASLCLISFIPK 60
           MAI L     HPPNP   P +P  P          S ++  +R  +L+TASLC +SFI +
Sbjct: 1   MAILLHSLSLHPPNP--KPQNPYKPKI-------LSSSATFRRDVVLRTASLCFVSFIFQ 60

Query: 61  CPVVQS-SENSPTSKPGLPAIANTKSWFQFYGDGFSIRVPPQFEDLTEPEDYSAGLSLYG 120
             + +S ++   ++KP    IANTKSWFQ++G GF+IRVPP FED+ EPEDYSAGLSLYG
Sbjct: 61  NQIPESLADPLKSTKPLRLGIANTKSWFQYFGSGFAIRVPPDFEDVNEPEDYSAGLSLYG 120

Query: 121 DKAKTKTFAARFGSPDGSEVLSVVTRPTNQLKITFLEAKDITDIGSLREAAKIFVPGGST 180
           DKAK +TFAARF +PDGSEVLSVV RP+NQLKITFLEAKDI+D+GSL+ AA++FVPG +T
Sbjct: 121 DKAKPQTFAARFQTPDGSEVLSVVIRPSNQLKITFLEAKDISDLGSLKAAARLFVPGAAT 180

Query: 181 LFSARTFKIKEDEGFRTYYFYEFGKNEQHVALVATVNSGQVFVAGATAPLSKWDEDGIKL 240
           ++SART K+KE+EG R YYFYEFG++E+ +ALVA+VN G+V++AGA AP SKW +D +KL
Sbjct: 181 IYSARTIKVKEEEGLRNYYFYEFGRDEERIALVASVNRGKVYIAGAAAPESKWKDDELKL 240

Query: 241 RSAAISLTVL 250
           RSAAIS T+L
Sbjct: 241 RSAAISFTIL 241

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BLAST of CsGy2G003680 vs. TrEMBL
Match: tr|A0A0A0LJH6|A0A0A0LJH6_CUCSA (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_2G020900 PE=4 SV=1)

HSP 1 Score: 503.1 bits (1294), Expect = 3.7e-139
Identity = 249/249 (100.00%), Postives = 249/249 (100.00%), Query Frame = 0


Query: 1   MAIPLSLCIHHPPNPHQNPTSPVPPPTTLCFPAPTSLNSKSKRHFILKTASLCLISFIPK 60
           MAIPLSLCIHHPPNPHQNPTSPVPPPTTLCFPAPTSLNSKSKRHFILKTASLCLISFIPK
Sbjct: 1   MAIPLSLCIHHPPNPHQNPTSPVPPPTTLCFPAPTSLNSKSKRHFILKTASLCLISFIPK 60

Query: 61  CPVVQSSENSPTSKPGLPAIANTKSWFQFYGDGFSIRVPPQFEDLTEPEDYSAGLSLYGD 120
           CPVVQSSENSPTSKPGLPAIANTKSWFQFYGDGFSIRVPPQFEDLTEPEDYSAGLSLYGD
Sbjct: 61  CPVVQSSENSPTSKPGLPAIANTKSWFQFYGDGFSIRVPPQFEDLTEPEDYSAGLSLYGD 120

Query: 121 KAKTKTFAARFGSPDGSEVLSVVTRPTNQLKITFLEAKDITDIGSLREAAKIFVPGGSTL 180
           KAKTKTFAARFGSPDGSEVLSVVTRPTNQLKITFLEAKDITDIGSLREAAKIFVPGGSTL
Sbjct: 121 KAKTKTFAARFGSPDGSEVLSVVTRPTNQLKITFLEAKDITDIGSLREAAKIFVPGGSTL 180

Query: 181 FSARTFKIKEDEGFRTYYFYEFGKNEQHVALVATVNSGQVFVAGATAPLSKWDEDGIKLR 240
           FSARTFKIKEDEGFRTYYFYEFGKNEQHVALVATVNSGQVFVAGATAPLSKWDEDGIKLR
Sbjct: 181 FSARTFKIKEDEGFRTYYFYEFGKNEQHVALVATVNSGQVFVAGATAPLSKWDEDGIKLR 240

Query: 241 SAAISLTVL 250
           SAAISLTVL
Sbjct: 241 SAAISLTVL 249

[Close]

BLAST of CsGy2G003680 vs. TrEMBL
Match: tr|A0A1S3C1A2|A0A1S3C1A2_CUCME (uncharacterized protein LOC103495336 isoform X1 OS=Cucumis melo OX=3656 GN=LOC103495336 PE=4 SV=1)

HSP 1 Score: 489.2 bits (1258), Expect = 5.5e-135
Identity = 241/249 (96.79%), Postives = 246/249 (98.80%), Query Frame = 0


Query: 1   MAIPLSLCIHHPPNPHQNPTSPVPPPTTLCFPAPTSLNSKSKRHFILKTASLCLISFIPK 60
           MAIPLSLC+HHPPNPHQNPTS VPPPTT+CFPA ++LNS+SKRHFILKTASLCLISF PK
Sbjct: 1   MAIPLSLCLHHPPNPHQNPTSAVPPPTTVCFPASSTLNSQSKRHFILKTASLCLISFFPK 60

Query: 61  CPVVQSSENSPTSKPGLPAIANTKSWFQFYGDGFSIRVPPQFEDLTEPEDYSAGLSLYGD 120
           CPVVQSSENSPTSKPGLPAIANTKSWFQFYGDGFSIRVPPQFEDLTEPEDYSAGLSLYGD
Sbjct: 61  CPVVQSSENSPTSKPGLPAIANTKSWFQFYGDGFSIRVPPQFEDLTEPEDYSAGLSLYGD 120

Query: 121 KAKTKTFAARFGSPDGSEVLSVVTRPTNQLKITFLEAKDITDIGSLREAAKIFVPGGSTL 180
           KAKTKTFAARFGSPDGSEVLSVVTRPTNQLKITFLEAKDITDIGSLREAAKIFVPGGSTL
Sbjct: 121 KAKTKTFAARFGSPDGSEVLSVVTRPTNQLKITFLEAKDITDIGSLREAAKIFVPGGSTL 180

Query: 181 FSARTFKIKEDEGFRTYYFYEFGKNEQHVALVATVNSGQVFVAGATAPLSKWDEDGIKLR 240
           FSARTFKIKEDEGFRTYYFYEFGKNEQHVALVATVNSGQVFVAGATAPLSKWDEDGIKLR
Sbjct: 181 FSARTFKIKEDEGFRTYYFYEFGKNEQHVALVATVNSGQVFVAGATAPLSKWDEDGIKLR 240

Query: 241 SAAISLTVL 250
           SAAISLTVL
Sbjct: 241 SAAISLTVL 249

[Close]

BLAST of CsGy2G003680 vs. TrEMBL
Match: tr|A0A1S3C070|A0A1S3C070_CUCME (uncharacterized protein LOC103495336 isoform X2 OS=Cucumis melo OX=3656 GN=LOC103495336 PE=4 SV=1)

HSP 1 Score: 385.2 bits (988), Expect = 1.1e-103
Identity = 187/197 (94.92%), Postives = 193/197 (97.97%), Query Frame = 0


Query: 1   MAIPLSLCIHHPPNPHQNPTSPVPPPTTLCFPAPTSLNSKSKRHFILKTASLCLISFIPK 60
           MAIPLSLC+HHPPNPHQNPTS VPPPTT+CFPA ++LNS+SKRHFILKTASLCLISF PK
Sbjct: 1   MAIPLSLCLHHPPNPHQNPTSAVPPPTTVCFPASSTLNSQSKRHFILKTASLCLISFFPK 60

Query: 61  CPVVQSSENSPTSKPGLPAIANTKSWFQFYGDGFSIRVPPQFEDLTEPEDYSAGLSLYGD 120
           CPVVQSSENSPTSKPGLPAIANTKSWFQFYGDGFSIRVPPQFEDLTEPEDYSAGLSLYGD
Sbjct: 61  CPVVQSSENSPTSKPGLPAIANTKSWFQFYGDGFSIRVPPQFEDLTEPEDYSAGLSLYGD 120

Query: 121 KAKTKTFAARFGSPDGSEVLSVVTRPTNQLKITFLEAKDITDIGSLREAAKIFVPGGSTL 180
           KAKTKTFAARFGSPDGSEVLSVVTRPTNQLKITFLEAKDITDIGSLREAAKIFVPGGSTL
Sbjct: 121 KAKTKTFAARFGSPDGSEVLSVVTRPTNQLKITFLEAKDITDIGSLREAAKIFVPGGSTL 180

Query: 181 FSARTFKIKEDEGFRTY 198
           FSARTFKIKEDEGFR +
Sbjct: 181 FSARTFKIKEDEGFRNF 197

[Close]

BLAST of CsGy2G003680 vs. TrEMBL
Match: tr|B9I7Z3|B9I7Z3_POPTR (Uncharacterized protein OS=Populus trichocarpa OX=3694 GN=POPTR_013G026500v3 PE=4 SV=1)

HSP 1 Score: 344.0 bits (881), Expect = 2.9e-91
Identity = 183/254 (72.05%), Postives = 204/254 (80.31%), Query Frame = 0


Query: 1   MAIPLSLCIHH---PPNPHQNPTSPVPPPTTLCFPAPTSLNSK-SKRHFILKTASLCLIS 60
           MAI LSL  HH   P NP QNP    P PT    P  TSL S  SKR FI KT SLCLIS
Sbjct: 1   MAILLSLSPHHHHPPLNPRQNPNPYSPKPT----PHATSLPSTISKRQFIFKTTSLCLIS 60

Query: 61  FIPKCPVVQS-SENSPTSKPGLPAIANTKSWFQFYGDGFSIRVPPQFEDLTEPEDYSAGL 120
              + P+ Q+ +E SP  K  L  +ANTKSWFQFYGDGF+IRVPPQFED+ EPEDYSAGL
Sbjct: 61  LATQHPLAQALAEPSPPLKSVLSILANTKSWFQFYGDGFAIRVPPQFEDIMEPEDYSAGL 120

Query: 121 SLYGDKAKTKTFAARFGSPDGSEVLSVVTRPTNQLKITFLEAKDITDIGSLREAAKIFVP 180
           SLYGDKAK KTFAARF S DGSEVL+VV RP+NQLKITFLEAKDITD+GSL+EAAK+FVP
Sbjct: 121 SLYGDKAKPKTFAARFASSDGSEVLNVVVRPSNQLKITFLEAKDITDLGSLKEAAKLFVP 180

Query: 181 GGSTLFSARTFKIKEDEGFRTYYFYEFGKNEQHVALVATVNSGQVFVAGATAPLSKWDED 240
           GG+TLFSART KIKE+EG+RTYYFYEFG+++QH ALVA VNSG+  +AGATAP SKWDED
Sbjct: 181 GGTTLFSARTLKIKEEEGYRTYYFYEFGRDDQHAALVAVVNSGKAIIAGATAPQSKWDED 240

Query: 241 GIKLRSAAISLTVL 250
           G+KLRSA ISLTVL
Sbjct: 241 GVKLRSAVISLTVL 250

[Close]

BLAST of CsGy2G003680 vs. TrEMBL
Match: tr|A0A1Q3B5G6|A0A1Q3B5G6_CEPFO (Uncharacterized protein OS=Cephalotus follicularis OX=3775 GN=CFOL_v3_06730 PE=4 SV=1)

HSP 1 Score: 340.9 bits (873), Expect = 2.4e-90
Identity = 175/251 (69.72%), Postives = 204/251 (81.27%), Query Frame = 0


Query: 1   MAIPLSLCIH-HPPNPHQNPTSPVPPPTTLCFPAPTSLNSKSKRHFILKTASLCLISFIP 60
           MAI LSL +  HPPNP QN     P PT+L            KRH ILKT S+C+IS   
Sbjct: 1   MAILLSLSLSLHPPNPTQN-----PKPTSLA-XXXXXXXXXXKRHLILKTTSVCIISLTT 60

Query: 61  KCPVVQS-SENSPTSKPGLPAIANTKSWFQFYGDGFSIRVPPQFEDLTEPEDYSAGLSLY 120
           + P+ QS +++SP SKP L  IANTKSWFQF+G+GFSIRVPP FED+ EPEDYSAGLSLY
Sbjct: 61  QNPLAQSLADSSPPSKPALSGIANTKSWFQFFGNGFSIRVPPHFEDIMEPEDYSAGLSLY 120

Query: 121 GDKAKTKTFAARFGSPDGSEVLSVVTRPTNQLKITFLEAKDITDIGSLREAAKIFVPGGS 180
           GDKAK KTFAARF SPDGSEV+SVV RP+NQLKITFLEAKDITD+GSL++A+KIFVP GS
Sbjct: 121 GDKAKPKTFAARFASPDGSEVVSVVVRPSNQLKITFLEAKDITDLGSLKQASKIFVPVGS 180

Query: 181 TLFSARTFKIKEDEGFRTYYFYEFGKNEQHVALVATVNSGQVFVAGATAPLSKWDEDGIK 240
           T++SART KIKEDEGF+TYYFYEFG++ QH+ALV  +NSG+ F+AGATAP SKWD+DG+K
Sbjct: 181 TIYSARTIKIKEDEGFKTYYFYEFGRDYQHIALVVAINSGKAFIAGATAPQSKWDDDGVK 240

Query: 241 LRSAAISLTVL 250
           LRSAAISLTVL
Sbjct: 241 LRSAAISLTVL 245

The following BLAST results are available for this feature:

BLAST of CsGy2G003680 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_004139199.1	5.6e-139	100.00	PREDICTED: uncharacterized protein LOC101214471 [Cucumis sativus] >KGN60867.1 hy...	[more]
XP_008455075.1	8.4e-135	96.79	PREDICTED: uncharacterized protein LOC103495336 isoform X1 [Cucumis melo]	[more]
XP_023521934.1	9.9e-120	88.76	uncharacterized protein LOC111785779 [Cucurbita pepo subsp. pepo] >XP_023521935....	[more]
XP_022946291.1	2.2e-119	88.35	uncharacterized protein LOC111450417 isoform X2 [Cucurbita moschata]	[more]
XP_022999130.1	4.2e-118	88.57	uncharacterized protein LOC111493605 isoform X2 [Cucurbita maxima] >XP_022999131...	[more]

BLAST of CsGy2G003680 vs. TAIR10


Match Name	E-value	Identity	Description
AT5G27390.1	2.7e-79	60.00	Mog1/PsbP/DUF1795-like photosystem II reaction center PsbP family protein	[more]

BLAST of CsGy2G003680 vs. Swiss-Prot


Match Name	E-value	Identity	Description

BLAST of CsGy2G003680 vs. TrEMBL


Match Name	E-value	Identity	Description
tr\|A0A0A0LJH6\|A0A0A0LJH6_CUCSA	3.7e-139	100.00	Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_2G020900 PE=4 SV=1	[more]
tr\|A0A1S3C1A2\|A0A1S3C1A2_CUCME	5.5e-135	96.79	uncharacterized protein LOC103495336 isoform X1 OS=Cucumis melo OX=3656 GN=LOC10...	[more]
tr\|A0A1S3C070\|A0A1S3C070_CUCME	1.1e-103	94.92	uncharacterized protein LOC103495336 isoform X2 OS=Cucumis melo OX=3656 GN=LOC10...	[more]
tr\|B9I7Z3\|B9I7Z3_POPTR	2.9e-91	72.05	Uncharacterized protein OS=Populus trichocarpa OX=3694 GN=POPTR_013G026500v3 PE=...	[more]
tr\|A0A1Q3B5G6\|A0A1Q3B5G6_CEPFO	2.4e-90	69.72	Uncharacterized protein OS=Cephalotus follicularis OX=3775 GN=CFOL_v3_06730 PE=4...	[more]

Annotated Terms

The following terms have been associated with this gene:

Vocabulary: **INTERPRO**
Term	Definition
IPR016123	Mog1/PsbP_a/b/a-sand

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0008150	biological_process
cellular_component	GO:0005575	cellular_component
molecular_function	GO:0003674	molecular_function

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
CsGy2G003680.1	CsGy2G003680.1	mRNA

InterPro

Analysis Name: InterPro Annotations of cucumber Gy14 genome (v2)
Date Performed: 2018-09-25


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR016123	Mog1/PsbP, alpha/beta/alpha sandwich	GENE3D	G3DSA:3.40.1000.10		coord: 82..249 e-value: 1.1E-5 score: 27.4
IPR016123	Mog1/PsbP, alpha/beta/alpha sandwich	SUPERFAMILY	SSF55724	Mog1p/PsbP-like	coord: 85..248
None	No IPR available	PANTHER	PTHR37764	FAMILY NOT NAMED	coord: 15..249

Synteny

The following gene(s) are orthologous to this gene:


Gene	Orthologue	Organism	Block
CsGy2G003680	Cla019858	Watermelon (97103) v1	cgybwmB140
CsGy2G003680	Csa2G020900	Cucumber (Chinese Long) v2	cgybcuB056
CsGy2G003680	MELO3C004308	Melon (DHL92) v3.5.1	cgybmeB120
CsGy2G003680	ClCG02G016080	Watermelon (Charleston Gray)	cgybwcgB119
CsGy2G003680	CSPI02G03570	Wild cucumber (PI 183967)	cgybcpiB056
CsGy2G003680	CmaCh05G011600	Cucurbita maxima (Rimu)	cgybcmaB257
CsGy2G003680	CmoCh05G011710	Cucurbita moschata (Rifu)	cgybcmoB243
CsGy2G003680	Cp4.1LG11g09550	Cucurbita pepo (Zucchini)	cgybcpeB168
CsGy2G003680	MELO3C004308.2	Melon (DHL92) v3.6.1	cgybmedB118
CsGy2G003680	CsaV3_2G004900	Cucumber (Chinese Long) v3	cgybcucB064
CsGy2G003680	Cla97C02G041880	Watermelon (97103) v2	cgybwmbB114
CsGy2G003680	Carg12883	Silver-seed gourd	carcgybB0890

The following gene(s) are paralogous to this gene:

None

The following block(s) are covering this gene:


Gene	Organism	Block
CsGy2G003680	Cucurbita maxima (Rimu)	cgybcmaB178
CsGy2G003680	Cucurbita moschata (Rifu)	cgybcmoB170
CsGy2G003680	Cucurbita pepo (Zucchini)	cgybcpeB271
CsGy2G003680	Bottle gourd (USVL1VR-Ls)	cgyblsiB089
CsGy2G003680	Silver-seed gourd	carcgybB0713