CsGy2G003440 (gene) Cucumber (Gy14) v2 | Cucurbit Genomics Database (CuGenDB)

Overview


Name	CsGy2G003440
Type	gene
Organism	Cucumis sativus (Cucumber (Gy14) v2)
Description	Superoxide dismutase [Cu-Zn]
Location	Chr2 : 2307484 .. 2311710 (-)

Genome Viewer

Gene Expression

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: five_prime_UTRexonCDSthree_prime_UTR

Hold the cursor over a type above to highlight its positions in the sequence below.

CTCAACGAAATTGAATTATGGATTTCGTCGGTCGGTCGAATTAAAATCGTGAGTTCCACACGCGGTGTCTTGTGGATTCAAAATTATGACCATTTTCATCATTCCTTGGCTTTTTGTATATTCGGCCATCAGCCATGCCTTCAAAATTTCGCTCCATTCCCATTGTTCTCTTCCTCTTCTCTTTCAAGCTGACCCTTTAGGTAAATGGTTCTCTCCCATTTCATCTCTAATTCCTCTGTTTCTCTTTTATTTTACTTGTTCTTTTTCAGCCATGTCCTCCATTTCTGTGGTGAAACTGAATTGTTCTTATCGATTTCTTGTTTAATTTCTGTTTTTCTCTTTGCGTGTTTTATTTATTTATTTTCGCTCGTTGAAGTTTAAAGATACCAAAAGTTGCGCTTCACTACTTTCCAATTTCGATGGTAGCTGCAAGGTGTAACTCTTACGCTCTTGGTTTTTTGAGTTTAATTTTTTTTGCTTCTTGTTGTTTACTGTTTAGCAAAAAGTATGGTGAGTACTAACAGAAAGTCCCAAACTTAATAGATAGATGATCATGTTCTAAGGAGCGCGATACTTTTGTTTGGCTAGCTTGTTCTTAGCTGATATGTGTCAGACACTCTGAGTTTTTTTGTTAAACGCTCATAGAACACTTTGTTGTATAGACCAAAAAATATTTGTATGATAATAATAATAATAACTTTGAAGTGTAAAATATATCCAGCTGAGTTTTTTTTAAGCATACAAGTGCATTAACTCATTTCCTCTAGATTTTAATTTATATATTTTGAAAATCGTATTGATTGGAACTCCTAGTTTTAACTGACTAAGTGTGAACTTATTTAAGGACATTGAAGGTTAGCATTGATCTTCTCTCTCAAATTTGGCGACGAGGAATTAGTTTTTGTGTCATTCATGTAGTTCCATTTTGCTTTTGAGCATTTGAATTGTTTGTTAACTATTGCTTTGATCAATATATTCGAAAGTGAAATTTCCTTAGTTTATTTTATTGATCAGTATCCAATTTTACCAGTTATTTCAGTTCTCCTAATAACCTTCATTGGATTTGAGTTCAGTTAACACAAAACAATGGTGAAAGCTGTAGCTGTTCTTGAGAGCAATCAGGGAGTCAGTGGAAGCATCTTCTTTAGCCAAAATGGCAATGGTAGCTCAAATTAGTGTTCGAATTTAAATGCTTACTCATTTTATGTTTTCTTTTATGTGGTTTTCAGTTTTTCCCTTGTATTATTCAGGTCCAACTATAATTACAGGAAATATTTCTGGTCTTAAGGCAGGGCTTCATGGCTTCCATGTTCATGCCCTTGGGGACACAACCAATGGTTGCTTATCAACTGGTACATTCTCATGAGTTGCGCCATCTTAGTTTCTCAATGTTAGATACAAAGTGTCTTTTAGGACATTATAACTCCACTTGCAAACAATTGGTTGCGCAGGGCCACATTTCAACCCTGAAGGCAAAGACCATGGTGCCCCAGATGATGAGAATCGTCACGTTGGTGATCTTGGAAATGTGGTTGCTGGTGATGATGGTATGTTTAATGCTATTCCATATTGCTTTTCATTTTCTCCTTGAAGTAAATTTTAGGAAAACTATGTTTTTACTTTGCGAGTTCTCAGATTATGTTTTTTTTATTCTTCAATTTTCAAAACGTACATTTTTATTCCTTGAGTTTTTTTTAGAATAGATGTATTTGGTCACGAGTAAATCTTTAAATATATTTTTCATTATTATTTTATATTACTTCTATCACATTGACATAGAAAAATAACTTTCTTAAAATTTATTTTTCTAATTTAAAATAATGATAAGAAATTTATGTCGGACCTTTTGAACTTTAAAAACTCGAAAACTAAGAAAAGTACATGTAAAAAATTTAGAGATCAAATTTACATGTCCTAAAAGATTTGGAGACTAAAAACAGTATATCTCGAAAACTATGAAACTAAACGCACACATAATTTAAAACTCAAGGTAATTTTGTCTAAATTTTAATGAGCCTAAATTCAATCCCTCCAAAATGCAGGACACTGGATTCCTTGAAGGCATCCAGCTTCCCTCTCCACCCTCCTAGCAATGACAATATTTCAATAAATATCACTTAATTTGACATGATTGTAAATGTTGTTACGTTTACCGTACAGGTACTGCTACTTTCTCAATTATTGACAAACAGGTTTGGACAATTTTATGTTTAGTTTGATATTTCACCATCTCTACTGGAAGTCTCAACTAGTGAGCATTACTTCTTTCTATGTTATGCAGATTTCCCTTGTTGGACCAAATTCCGTTCTTGGAAGGTCTATTGTTGTCCATGCAGATCCTGATGATCTTGGCAGGGGTAATGTTATAAATCTTCATTGCTATATTTCTAATAGGAATTCTACACATTTAACTCTATCGAAACTTTATCGTGCAAACATTTTAATGATTGACCTGAAGAAATTAACCTCAATTGCATTAATTGTAACTATGCTCCACTTTCGCCTTGGTATTAATTTAATCTTCTTTGAATTCAGTGATATCCTTTTGGGGTTCTTCCCATTTTCTCTCCATACGTGCAGAACATCCATATTCTTCACATTTGTATAATTCAGTTTATTCAAATCTTAAACCAATAGATCATTTTACGTGCTGGAAGTATCAATCTTTGGAATATTTGTTTCCCTTCAATTTCTTGTAAACCTCCCGATGTGTTCAAAAATACCTCAAAGGAATCTTTTTTATCACAGAATGCAGAATGGTTAAAAGAAACTGTAACCAGCAGCCATTTATATAGGCTGAGATAAACAACCTAGGGAAAAAAGGGCTCTCGATAAAAACAAAACAAACTAACAGCTACCAAATAAAGCTGTAAAAATACAACTAAGAAGGGTAAAATCTAAGAACAAAGAATTATCTAACTTAAACAAGAAACATCCCCAAGAAAGAACAAGAAACTAGGAACAAACTAATAACAATAGCCCTAATGACCTCCTTTTGTCTCTGCCTGTCAAGTGGATGACATTCCATTAAATTCAGGATAACCAAATAAAGAAATCTGAAGCATAATCTGACCTTGTCTGCAGGTGGAACTGAACTTAGCCTGACCACTGGCAATGCGGGTGAGAGAATAGGCTGTGGTAAGTTACATAATCATACTAATTCTTCACATTCACATTGCTTCTAAGGATTATGCTATGCCATCCAAACGGTTAAAAAAAACAAAAACAAAAAAGCATACTTGTTCAAACCGTACATTTCTTTTTTCGATAGTAGGTTTGAGATTTGATAGAACCAAGTTCATGTTAGTTAAATTATTGAACGTGGAATTATCGTTAGGTGTATGTCTTTTAGTTAATTTACCAAGGTTTTAAATTTTACTCTCGCAACAAATGTACAGTTCTAAATAACAGTCATATATGTATAATGACGTTATGTGATAAATTGTACTGGTACTTTATACATATACACACTTCTCTGGTTTTATTGCTATAATTTACATCAATTCTTTAACTTGCACAAATAGATTTAACACCTTGAATGTATTGATTGGGACTTCTTTTATTTTCTTGGGATTAATCTGTTCTCTAAAAGAGGTAGCTAAACTTTTTCCTTGACGTAAACATCTGTTATTATATATTTGTTGCAGGCGTTATTGGGCTGCAAGAGTGAAAAACACTTTGGTTTGGATGGTCTGTGATGATTGATGAAGTATAATGTATAAAATGCTTCACTTTGGTTTGGAACATATGTATTGTATCTAAAATAAGATGGCTTCAAGCCCTATAGCAGAAATAAATAAAATTAGAATGAAGTACTGCTAAATCTAATCTTATCTTTTCTTTACTTTATTCTTCTCTTCTCTCCTCTCTCTCTTTTATTTTAGGAAACAATGTTTTCACATAATATAGACCGGCACAATAGAAGAATCAATATGTAATGCCGATTGAAATAGCAGAATTATTAGGAGAATATTAGTAGGGTGTTCGGTTGAGGCATGTTAGAATATTCATTATGTTTGTTAAGTCTTTTTGTTATAAATAGAAGGTGAGGGGTTAGAGAGGAGGGTGTGAAGAATTTTGTAGTGGAATTTCCTTGTAACGGAAATTTGAAAGAGACTAGCTCTCTCCAAAGGTTAGGGGTTACTTGTTCTTGTGATATTCTAACATATATTTTATATACCTTTGTATTTAATGTCCTATAATTGTTCAGTTCCTATAGAGTTCATC

mRNA sequence

CTCAACGAAATTGAATTATGGATTTCGTCGGTCGGTCGAATTAAAATCGTGAGTTCCACACGCGGTGTCTTGTGGATTCAAAATTATGACCATTTTCATCATTCCTTGGCTTTTTGTATATTCGGCCATCAGCCATGCCTTCAAAATTTCGCTCCATTCCCATTGTTCTCTTCCTCTTCTCTTTCAAGCTGACCCTTTAGTTAACACAAAACAATGGTGAAAGCTGTAGCTGTTCTTGAGAGCAATCAGGGAGTCAGTGGAAGCATCTTCTTTAGCCAAAATGGCAATGGTCCAACTATAATTACAGGAAATATTTCTGGTCTTAAGGCAGGGCTTCATGGCTTCCATGTTCATGCCCTTGGGGACACAACCAATGGTTGCTTATCAACTGGGCCACATTTCAACCCTGAAGGCAAAGACCATGGTGCCCCAGATGATGAGAATCGTCACGTTGGTGATCTTGGAAATGTGGTTGCTGGTACTGCTACTTTCTCAATTATTGACAAACAGATTTCCCTTGTTGGACCAAATTCCGTTCTTGGAAGGTCTATTGTTGTCCATGCAGATCCTGATGATCTTGGCAGGGGTGGAACTGAACTTAGCCTGACCACTGGCAATGCGGGTGAGAGAATAGGCTGTGGCGTTATTGGGCTGCAAGAGTGAAAAACACTTTGGTTTGGATGGTCTGTGATGATTGATGAAGTATAATGTATAAAATGCTTCACTTTGGTTTGGAACATATGTATTGTATCTAAAATAAGATGGCTTCAAGCCCTATAGCAGAAATAAATAAAATTAGAATGAAGTACTGCTAAATCTAATCTTATCTTTTCTTTACTTTATTCTTCTCTTCTCTCCTCTCTCTCTTTTATTTTAGGAAACAATGTTTTCACATAATATAGACCGGCACAATAGAAGAATCAATATGTAATGCCGATTGAAATAGCAGAATTATTAGGAGAATATTAGTAGGGTGTTCGGTTGAGGCATGTTAGAATATTCATTATGTTTGTTAAGTCTTTTTGTTATAAATAGAAGGTGAGGGGTTAGAGAGGAGGGTGTGAAGAATTTTGTAGTGGAATTTCCTTGTAACGGAAATTTGAAAGAGACTAGCTCTCTCCAAAGGTTAGGGGTTACTTGTTCTTGTGATATTCTAACATATATTTTATATACCTTTGTATTTAATGTCCTATAATTGTTCAGTTCCTATAGAGTTCATC

Coding sequence (CDS)

ATGGTGAAAGCTGTAGCTGTTCTTGAGAGCAATCAGGGAGTCAGTGGAAGCATCTTCTTTAGCCAAAATGGCAATGGTCCAACTATAATTACAGGAAATATTTCTGGTCTTAAGGCAGGGCTTCATGGCTTCCATGTTCATGCCCTTGGGGACACAACCAATGGTTGCTTATCAACTGGGCCACATTTCAACCCTGAAGGCAAAGACCATGGTGCCCCAGATGATGAGAATCGTCACGTTGGTGATCTTGGAAATGTGGTTGCTGGTACTGCTACTTTCTCAATTATTGACAAACAGATTTCCCTTGTTGGACCAAATTCCGTTCTTGGAAGGTCTATTGTTGTCCATGCAGATCCTGATGATCTTGGCAGGGGTGGAACTGAACTTAGCCTGACCACTGGCAATGCGGGTGAGAGAATAGGCTGTGGCGTTATTGGGCTGCAAGAGTGA

Protein sequence

MVKAVAVLESNQGVSGSIFFSQNGNGPTIITGNISGLKAGLHGFHVHALGDTTNGCLSTGPHFNPEGKDHGAPDDENRHVGDLGNVVAGTATFSIIDKQISLVGPNSVLGRSIVVHADPDDLGRGGTELSLTTGNAGERIGCGVIGLQE

Homology

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BLAST of CsGy2G003440 vs. NCBI nr
Match: XP_004139207.1 (PREDICTED: superoxide dismutase [Cu-Zn] 1 [Cucumis sativus] >XP_011648784.1 PREDICTED: superoxide dismutase [Cu-Zn] 1 [Cucumis sativus] >KGN60844.1 hypothetical protein Csa_2G013250 [Cucumis sativus])

HSP 1 Score: 297.4 bits (760), Expect = 2.8e-77
Identity = 149/152 (98.03%), Postives = 149/152 (98.03%), Query Frame = 0


Query: 1   MVKAVAVLESNQGVSGSIFFSQNGNGPTIITGNISGLKAGLHGFHVHALGDTTNGCLSTG 60
           MVKAVAVLESNQGVSGSIFFSQNGNGPTIITGNISGLKAGLHGFHVHALGDTTNGCLSTG
Sbjct: 1   MVKAVAVLESNQGVSGSIFFSQNGNGPTIITGNISGLKAGLHGFHVHALGDTTNGCLSTG 60

Query: 61  PHFNPEGKDHGAPDDENRHVGDLGNVVA---GTATFSIIDKQISLVGPNSVLGRSIVVHA 120
           PHFNPEGKDHGAPDDENRHVGDLGNVVA   GTATFSIIDKQISLVGPNSVLGRSIVVHA
Sbjct: 61  PHFNPEGKDHGAPDDENRHVGDLGNVVAGDDGTATFSIIDKQISLVGPNSVLGRSIVVHA 120

Query: 121 DPDDLGRGGTELSLTTGNAGERIGCGVIGLQE 150
           DPDDLGRGGTELSLTTGNAGERIGCGVIGLQE
Sbjct: 121 DPDDLGRGGTELSLTTGNAGERIGCGVIGLQE 152

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BLAST of CsGy2G003440 vs. NCBI nr
Match: XP_008455574.1 (PREDICTED: superoxide dismutase [Cu-Zn] isoform X1 [Cucumis melo])

HSP 1 Score: 290.8 bits (743), Expect = 2.6e-75
Identity = 146/152 (96.05%), Postives = 147/152 (96.71%), Query Frame = 0


Query: 1   MVKAVAVLESNQGVSGSIFFSQNGNGPTIITGNISGLKAGLHGFHVHALGDTTNGCLSTG 60
           MVKAVAVLESNQGVSG+IFFSQNGNGPT ITGNISGLKAGLHGFHVHALGDTTNGCLSTG
Sbjct: 1   MVKAVAVLESNQGVSGTIFFSQNGNGPTTITGNISGLKAGLHGFHVHALGDTTNGCLSTG 60

Query: 61  PHFNPEGKDHGAPDDENRHVGDLGNVVA---GTATFSIIDKQISLVGPNSVLGRSIVVHA 120
           PHFNPEGKDHGAPDDENRHVGDLGNVVA   GTATFSIIDKQISLVG NSVLGRSIVVHA
Sbjct: 61  PHFNPEGKDHGAPDDENRHVGDLGNVVAGDNGTATFSIIDKQISLVGRNSVLGRSIVVHA 120

Query: 121 DPDDLGRGGTELSLTTGNAGERIGCGVIGLQE 150
           DPDDLGRGGTELSLTTGNAGERIGCGVIGLQE
Sbjct: 121 DPDDLGRGGTELSLTTGNAGERIGCGVIGLQE 152

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BLAST of CsGy2G003440 vs. NCBI nr
Match: XP_022999148.1 (superoxide dismutase [Cu-Zn] 1-like isoform X2 [Cucurbita maxima])

HSP 1 Score: 274.6 bits (701), Expect = 1.9e-70
Identity = 136/152 (89.47%), Postives = 141/152 (92.76%), Query Frame = 0


Query: 1   MVKAVAVLESNQGVSGSIFFSQNGNGPTIITGNISGLKAGLHGFHVHALGDTTNGCLSTG 60
           MVKAVAVLESNQGV G++FF+QNGNGPT + GNISGL  GLHGFHVHALGDTTNGC STG
Sbjct: 1   MVKAVAVLESNQGVKGTVFFNQNGNGPTTVRGNISGLIPGLHGFHVHALGDTTNGCSSTG 60

Query: 61  PHFNPEGKDHGAPDDENRHVGDLGNVVA---GTATFSIIDKQISLVGPNSVLGRSIVVHA 120
           PHFNPEGKDHGAPDDENRHVGDLGN+VA   GTATFSIIDKQISLVGPNSVLGRSIVVHA
Sbjct: 61  PHFNPEGKDHGAPDDENRHVGDLGNLVAGDDGTATFSIIDKQISLVGPNSVLGRSIVVHA 120

Query: 121 DPDDLGRGGTELSLTTGNAGERIGCGVIGLQE 150
           DPDDLGRG TELSLTTGNAGERI CGVIGLQE
Sbjct: 121 DPDDLGRGQTELSLTTGNAGERIACGVIGLQE 152

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BLAST of CsGy2G003440 vs. NCBI nr
Match: XP_022946180.1 (superoxide dismutase [Cu-Zn]-like isoform X2 [Cucurbita moschata])

HSP 1 Score: 272.3 bits (695), Expect = 9.6e-70
Identity = 135/152 (88.82%), Postives = 140/152 (92.11%), Query Frame = 0


Query: 1   MVKAVAVLESNQGVSGSIFFSQNGNGPTIITGNISGLKAGLHGFHVHALGDTTNGCLSTG 60
           MVKAVAVLESNQGV G++FF+QNGNGPT + GNISGL  GLHGFHVHALGDTTNGC STG
Sbjct: 1   MVKAVAVLESNQGVKGTVFFNQNGNGPTTVRGNISGLTPGLHGFHVHALGDTTNGCSSTG 60

Query: 61  PHFNPEGKDHGAPDDENRHVGDLGNVVA---GTATFSIIDKQISLVGPNSVLGRSIVVHA 120
           PHFNPEGKDHGAPDDENRHVGDLGN+VA   GTATFSIIDKQISLVG NSVLGRSIVVHA
Sbjct: 61  PHFNPEGKDHGAPDDENRHVGDLGNLVAGDDGTATFSIIDKQISLVGTNSVLGRSIVVHA 120

Query: 121 DPDDLGRGGTELSLTTGNAGERIGCGVIGLQE 150
           DPDDLGRG TELSLTTGNAGERI CGVIGLQE
Sbjct: 121 DPDDLGRGQTELSLTTGNAGERIACGVIGLQE 152

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BLAST of CsGy2G003440 vs. NCBI nr
Match: XP_022150819.1 (superoxide dismutase [Cu-Zn] 1-like isoform X2 [Momordica charantia] >XP_022150820.1 superoxide dismutase [Cu-Zn] 1-like isoform X2 [Momordica charantia])

HSP 1 Score: 269.2 bits (687), Expect = 8.1e-69
Identity = 131/152 (86.18%), Postives = 143/152 (94.08%), Query Frame = 0


Query: 1   MVKAVAVLESNQGVSGSIFFSQNGNGPTIITGNISGLKAGLHGFHVHALGDTTNGCLSTG 60
           MVKAVAVLES+ GVSG++FFSQNGNGPT +TGNISGL+AGLHGFHVHALGDTTNGC STG
Sbjct: 1   MVKAVAVLESSLGVSGTVFFSQNGNGPTTVTGNISGLQAGLHGFHVHALGDTTNGCSSTG 60

Query: 61  PHFNPEGKDHGAPDDENRHVGDLGNVVA---GTATFSIIDKQISLVGPNSVLGRSIVVHA 120
           PHFNPEGKDHGAP+D+NRHVGDLGN+VA   GTATFSIIDKQISLV PNS++GR+IVVHA
Sbjct: 61  PHFNPEGKDHGAPEDKNRHVGDLGNLVAGDDGTATFSIIDKQISLVRPNSIVGRAIVVHA 120

Query: 121 DPDDLGRGGTELSLTTGNAGERIGCGVIGLQE 150
           DPDDLGRG TELSLTTGNAGER+ CGVIGLQE
Sbjct: 121 DPDDLGRGQTELSLTTGNAGERVACGVIGLQE 152

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BLAST of CsGy2G003440 vs. TAIR10
Match: AT1G08830.1 (copper/zinc superoxide dismutase 1)

HSP 1 Score: 229.6 bits (584), Expect = 1.3e-60
Identity = 106/151 (70.20%), Postives = 127/151 (84.11%), Query Frame = 0


Query: 1   MVKAVAVLESNQGVSGSIFFSQNGNGPTIITGNISGLKAGLHGFHVHALGDTTNGCLSTG 60
           M K VAVL S++GV+G+IFF+Q G+G T ++G +SGLK GLHGFHVHALGDTTNGC+STG
Sbjct: 1   MAKGVAVLNSSEGVTGTIFFTQEGDGVTTVSGTVSGLKPGLHGFHVHALGDTTNGCMSTG 60

Query: 61  PHFNPEGKDHGAPDDENRHVGDLGNVVA---GTATFSIIDKQISLVGPNSVLGRSIVVHA 120
           PHFNP+GK HGAP+D NRH GDLGN+     GTATF+I D QI L GPNS++GR++VVHA
Sbjct: 61  PHFNPDGKTHGAPEDANRHAGDLGNITVGDDGTATFTITDCQIPLTGPNSIVGRAVVVHA 120

Query: 121 DPDDLGRGGTELSLTTGNAGERIGCGVIGLQ 149
           DPDDLG+GG ELSL TGNAG R+ CG+IGLQ
Sbjct: 121 DPDDLGKGGHELSLATGNAGGRVACGIIGLQ 151

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BLAST of CsGy2G003440 vs. TAIR10
Match: AT5G18100.1 (copper/zinc superoxide dismutase 3)

HSP 1 Score: 184.9 bits (468), Expect = 3.7e-47
Identity = 87/150 (58.00%), Postives = 113/150 (75.33%), Query Frame = 0


Query: 2   VKAVAVLESNQGVSGSIFFSQNGNGPTIITGNISGLKAGLHGFHVHALGDTTNGCLSTGP 61
           ++AVA++  +  V G + F Q+ +G T +TG ISGL  G HGFH+H+ GDTTNGC+STGP
Sbjct: 8   LRAVALIAGDNNVRGCLQFVQDISGTTHVTGKISGLSPGFHGFHIHSFGDTTNGCISTGP 67

Query: 62  HFNPEGKDHGAPDDENRHVGDLGNVVAGT---ATFSIIDKQISLVGPNSVLGRSIVVHAD 121
           HFNP  + HG P++E RH GDLGN++AG+   A   I DK I L G  S+LGR++VVHAD
Sbjct: 68  HFNPLNRVHGPPNEEERHAGDLGNILAGSNGVAEILIKDKHIPLSGQYSILGRAVVVHAD 127

Query: 122 PDDLGRGGTELSLTTGNAGERIGCGVIGLQ 149
           PDDLG+GG +LS +TGNAG R+GCG+IGLQ
Sbjct: 128 PDDLGKGGHKLSKSTGNAGSRVGCGIIGLQ 157

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BLAST of CsGy2G003440 vs. TAIR10
Match: AT2G28190.1 (copper/zinc superoxide dismutase 2)

HSP 1 Score: 161.8 bits (408), Expect = 3.3e-40
Identity = 78/117 (66.67%), Postives = 89/117 (76.07%), Query Frame = 0


Query: 34  ISGLKAGLHGFHVHALGDTTNGCLSTGPHFNPEGKDHGAPDDENRHVGDLGNVVA---GT 93
           I+GL  G HGFH+H  GDTTNGC+STGPHFNP    HGAP+DE RH GDLGN+ A   G 
Sbjct: 97  ITGLTPGPHGFHLHEFGDTTNGCISTGPHFNPNNMTHGAPEDECRHAGDLGNINANADGV 156

Query: 94  ATFSIIDKQISLVGPNSVLGRSIVVHADPDDLGRGGTELSLTTGNAGERIGCGVIGL 148
           A  +I+D QI L GPNSV+GR+ VVH   DDLG+GG ELSLTTGNAG R+ CGVIGL
Sbjct: 157 AETTIVDNQIPLTGPNSVVGRAFVVHELKDDLGKGGHELSLTTGNAGGRLACGVIGL 213

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BLAST of CsGy2G003440 vs. TAIR10
Match: AT1G12520.1 (copper chaperone for SOD1)

HSP 1 Score: 48.1 bits (113), Expect = 5.4e-06
Identity = 38/140 (27.14%), Postives = 63/140 (45.00%), Query Frame = 0


Query: 1   MVKAVAVLESNQGVSGSIFFSQNGNGPTIITGNISGLKAGLHGFHVHALGDTTNGCLSTG 60
           +V A         + G + F+Q       I  N +GL  G H + ++  GD TNG  STG
Sbjct: 160 LVSAAVAEFKGPDIFGVVRFAQVSMELARIEANFTGLSPGTHSWCINEYGDLTNGAASTG 219

Query: 61  PHFNPEGKDHGAPDDENRHVGDLGNVVA---GTATFSIIDKQISLVGPNSVLGRSIVVHA 120
             +NP     G        +GDLG + A   G A +S   +++ +     ++GR++VV+ 
Sbjct: 220 SLYNPFQDQTG-----TEPLGDLGTLEADKNGEAFYSGKKEKLKVA---DLIGRAVVVYK 279

Query: 121 DPDDLGRGGTELSLTTGNAG 138
             D+    G   ++   +AG
Sbjct: 280 TDDNKSGPGLTAAVIARSAG 291

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BLAST of CsGy2G003440 vs. Swiss-Prot
Match: sp|Q07796|SODC_IPOBA (Superoxide dismutase [Cu-Zn] OS=Ipomoea batatas OX=4120 GN=SODCC PE=2 SV=2)

HSP 1 Score: 238.0 bits (606), Expect = 6.6e-62
Identity = 111/151 (73.51%), Postives = 130/151 (86.09%), Query Frame = 0


Query: 1   MVKAVAVLESNQGVSGSIFFSQNGNGPTIITGNISGLKAGLHGFHVHALGDTTNGCLSTG 60
           MVKAVAVL S++GVSG+IFFSQ G+GPT +TGN+SGLK GLHGFHVHALGDTTNGC+STG
Sbjct: 1   MVKAVAVLSSSEGVSGTIFFSQEGDGPTTVTGNVSGLKPGLHGFHVHALGDTTNGCMSTG 60

Query: 61  PHFNPEGKDHGAPDDENRHVGDLGNVVA---GTATFSIIDKQISLVGPNSVLGRSIVVHA 120
           PHFNP GK+HGAP D+NRH GDLGN+     GTA+F+I DKQI L G NSV+GR++VVH 
Sbjct: 61  PHFNPAGKEHGAPGDDNRHAGDLGNITVGEDGTASFTITDKQIPLTGANSVIGRAVVVHG 120

Query: 121 DPDDLGRGGTELSLTTGNAGERIGCGVIGLQ 149
           DPDDLG+GG ELS +TGNAG R+ CG+IGLQ
Sbjct: 121 DPDDLGKGGHELSKSTGNAGGRVACGIIGLQ 151

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BLAST of CsGy2G003440 vs. Swiss-Prot
Match: sp|P93258|SODC1_MESCR (Superoxide dismutase [Cu-Zn] 1 OS=Mesembryanthemum crystallinum OX=3544 GN=SODCC.1 PE=2 SV=1)

HSP 1 Score: 236.9 bits (603), Expect = 1.5e-61
Identity = 110/151 (72.85%), Postives = 129/151 (85.43%), Query Frame = 0


Query: 1   MVKAVAVLESNQGVSGSIFFSQNGNGPTIITGNISGLKAGLHGFHVHALGDTTNGCLSTG 60
           MVKAV VL S++GVSG++ F+Q G+GPT +TGN+SGL+ GLHGFHVHALGDTTNGC+STG
Sbjct: 1   MVKAVVVLSSSEGVSGTVQFTQEGSGPTTVTGNVSGLRPGLHGFHVHALGDTTNGCMSTG 60

Query: 61  PHFNPEGKDHGAPDDENRHVGDLGNVVA---GTATFSIIDKQISLVGPNSVLGRSIVVHA 120
           PHFNP GK+HGAP+DE RH GDLGN+     GTATF+IID QI L GPNS++GR++VVHA
Sbjct: 61  PHFNPAGKEHGAPEDETRHAGDLGNITVGDDGTATFTIIDSQIPLTGPNSIVGRAVVVHA 120

Query: 121 DPDDLGRGGTELSLTTGNAGERIGCGVIGLQ 149
           DPDDLGRGG ELS  TGNAG R+ CGVIGLQ
Sbjct: 121 DPDDLGRGGHELSKATGNAGGRVACGVIGLQ 151

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BLAST of CsGy2G003440 vs. Swiss-Prot
Match: sp|P27082|SODC_NICPL (Superoxide dismutase [Cu-Zn] OS=Nicotiana plumbaginifolia OX=4092 GN=SODCC PE=2 SV=2)

HSP 1 Score: 235.3 bits (599), Expect = 4.3e-61
Identity = 108/151 (71.52%), Postives = 131/151 (86.75%), Query Frame = 0


Query: 1   MVKAVAVLESNQGVSGSIFFSQNGNGPTIITGNISGLKAGLHGFHVHALGDTTNGCLSTG 60
           MVKAVAVL S++GVSG+IFF+Q+G+ PT +TGN+SGLK GLHGFHVHALGDTTNGC+STG
Sbjct: 1   MVKAVAVLSSSEGVSGTIFFTQDGDAPTTVTGNVSGLKPGLHGFHVHALGDTTNGCMSTG 60

Query: 61  PHFNPEGKDHGAPDDENRHVGDLGNVVA---GTATFSIIDKQISLVGPNSVLGRSIVVHA 120
           PH+NP GK+HGAP+DE RH GDLGN+     GTA+F++ DKQI L GP S++GR++VVHA
Sbjct: 61  PHYNPAGKEHGAPEDEVRHAGDLGNITVGEDGTASFTLTDKQIPLAGPQSIIGRAVVVHA 120

Query: 121 DPDDLGRGGTELSLTTGNAGERIGCGVIGLQ 149
           DPDDLG+GG ELS TTGNAG R+ CG+IGLQ
Sbjct: 121 DPDDLGKGGHELSKTTGNAGGRVACGIIGLQ 151

[Close]

BLAST of CsGy2G003440 vs. Swiss-Prot
Match: sp|Q8L5E0|SODC2_OLEEU (Superoxide dismutase [Cu-Zn] 2 OS=Olea europaea OX=4146 GN=OLE5 PE=1 SV=2)

HSP 1 Score: 234.2 bits (596), Expect = 9.5e-61
Identity = 106/151 (70.20%), Postives = 130/151 (86.09%), Query Frame = 0


Query: 1   MVKAVAVLESNQGVSGSIFFSQNGNGPTIITGNISGLKAGLHGFHVHALGDTTNGCLSTG 60
           MVKAV VL S++GV+G+++F+Q G+GPT +TGN+SGLK GLHGFHVHALGDTTNGC+STG
Sbjct: 1   MVKAVTVLNSSEGVTGTVYFTQEGDGPTTVTGNLSGLKPGLHGFHVHALGDTTNGCMSTG 60

Query: 61  PHFNPEGKDHGAPDDENRHVGDLGNVVA---GTATFSIIDKQISLVGPNSVLGRSIVVHA 120
           PHFNP GK+HGAP DENRH GDLGN+     GTA  +I+DKQI L GP+S++GR++VVH+
Sbjct: 61  PHFNPVGKEHGAPGDENRHAGDLGNITVGEDGTAAINIVDKQIPLTGPHSIIGRAVVVHS 120

Query: 121 DPDDLGRGGTELSLTTGNAGERIGCGVIGLQ 149
           DPDDLGRGG ELS +TGNAG R+ CG+IGLQ
Sbjct: 121 DPDDLGRGGHELSKSTGNAGGRVACGIIGLQ 151

[Close]

BLAST of CsGy2G003440 vs. Swiss-Prot
Match: sp|O49073|SODC_PAUKA (Superoxide dismutase [Cu-Zn] OS=Paulownia kawakamii OX=70770 GN=SODCC PE=2 SV=1)

HSP 1 Score: 233.8 bits (595), Expect = 1.2e-60
Identity = 109/151 (72.19%), Postives = 128/151 (84.77%), Query Frame = 0


Query: 1   MVKAVAVLESNQGVSGSIFFSQNGNGPTIITGNISGLKAGLHGFHVHALGDTTNGCLSTG 60
           MVK VAVL S++GVSG+I+F+Q G+GPT +TGN+SGLK G HGFHVHALGDTTNGCLSTG
Sbjct: 1   MVKGVAVLSSSEGVSGTIYFTQEGDGPTTVTGNVSGLKPGPHGFHVHALGDTTNGCLSTG 60

Query: 61  PHFNPEGKDHGAPDDENRHVGDLGNVVA---GTATFSIIDKQISLVGPNSVLGRSIVVHA 120
           PHFNP GK+HGAPDDE RH GDLGNV     GTA F+I+DKQI L GP+S++GR++VVHA
Sbjct: 61  PHFNPAGKEHGAPDDEVRHAGDLGNVTVGEDGTAAFTIVDKQIPLTGPHSIIGRAVVVHA 120

Query: 121 DPDDLGRGGTELSLTTGNAGERIGCGVIGLQ 149
           DPDDLG+GG ELS TTGN G R+ CG+ GLQ
Sbjct: 121 DPDDLGKGGHELSKTTGNTGGRVACGINGLQ 151

[Close]

BLAST of CsGy2G003440 vs. TrEMBL
Match: tr|A0A0A0LIH2|A0A0A0LIH2_CUCSA (Superoxide dismutase [Cu-Zn] OS=Cucumis sativus OX=3659 GN=Csa_2G013250 PE=3 SV=1)

HSP 1 Score: 297.4 bits (760), Expect = 1.8e-77
Identity = 149/152 (98.03%), Postives = 149/152 (98.03%), Query Frame = 0


Query: 1   MVKAVAVLESNQGVSGSIFFSQNGNGPTIITGNISGLKAGLHGFHVHALGDTTNGCLSTG 60
           MVKAVAVLESNQGVSGSIFFSQNGNGPTIITGNISGLKAGLHGFHVHALGDTTNGCLSTG
Sbjct: 1   MVKAVAVLESNQGVSGSIFFSQNGNGPTIITGNISGLKAGLHGFHVHALGDTTNGCLSTG 60

Query: 61  PHFNPEGKDHGAPDDENRHVGDLGNVVA---GTATFSIIDKQISLVGPNSVLGRSIVVHA 120
           PHFNPEGKDHGAPDDENRHVGDLGNVVA   GTATFSIIDKQISLVGPNSVLGRSIVVHA
Sbjct: 61  PHFNPEGKDHGAPDDENRHVGDLGNVVAGDDGTATFSIIDKQISLVGPNSVLGRSIVVHA 120

Query: 121 DPDDLGRGGTELSLTTGNAGERIGCGVIGLQE 150
           DPDDLGRGGTELSLTTGNAGERIGCGVIGLQE
Sbjct: 121 DPDDLGRGGTELSLTTGNAGERIGCGVIGLQE 152

[Close]

BLAST of CsGy2G003440 vs. TrEMBL
Match: tr|A0A1S3C1D1|A0A1S3C1D1_CUCME (Superoxide dismutase [Cu-Zn] OS=Cucumis melo OX=3656 GN=LOC103495717 PE=3 SV=1)

HSP 1 Score: 290.8 bits (743), Expect = 1.7e-75
Identity = 146/152 (96.05%), Postives = 147/152 (96.71%), Query Frame = 0


Query: 1   MVKAVAVLESNQGVSGSIFFSQNGNGPTIITGNISGLKAGLHGFHVHALGDTTNGCLSTG 60
           MVKAVAVLESNQGVSG+IFFSQNGNGPT ITGNISGLKAGLHGFHVHALGDTTNGCLSTG
Sbjct: 1   MVKAVAVLESNQGVSGTIFFSQNGNGPTTITGNISGLKAGLHGFHVHALGDTTNGCLSTG 60

Query: 61  PHFNPEGKDHGAPDDENRHVGDLGNVVA---GTATFSIIDKQISLVGPNSVLGRSIVVHA 120
           PHFNPEGKDHGAPDDENRHVGDLGNVVA   GTATFSIIDKQISLVG NSVLGRSIVVHA
Sbjct: 61  PHFNPEGKDHGAPDDENRHVGDLGNVVAGDNGTATFSIIDKQISLVGRNSVLGRSIVVHA 120

Query: 121 DPDDLGRGGTELSLTTGNAGERIGCGVIGLQE 150
           DPDDLGRGGTELSLTTGNAGERIGCGVIGLQE
Sbjct: 121 DPDDLGRGGTELSLTTGNAGERIGCGVIGLQE 152

[Close]

BLAST of CsGy2G003440 vs. TrEMBL
Match: tr|A0A0D2U2R5|A0A0D2U2R5_GOSRA (Superoxide dismutase [Cu-Zn] OS=Gossypium raimondii OX=29730 GN=B456_013G192900 PE=3 SV=1)

HSP 1 Score: 246.9 bits (629), Expect = 2.9e-62
Identity = 115/151 (76.16%), Postives = 133/151 (88.08%), Query Frame = 0


Query: 1   MVKAVAVLESNQGVSGSIFFSQNGNGPTIITGNISGLKAGLHGFHVHALGDTTNGCLSTG 60
           MVKAVAVL SN+GVSG++FFSQ G+GPT +TGN+SGLKAGLHGFHVHALGDTTNGC+STG
Sbjct: 1   MVKAVAVLSSNEGVSGTVFFSQEGDGPTTVTGNLSGLKAGLHGFHVHALGDTTNGCMSTG 60

Query: 61  PHFNPEGKDHGAPDDENRHVGDLGNVVA---GTATFSIIDKQISLVGPNSVLGRSIVVHA 120
           PHFNP GK+HGAP+DENRH GDLGNV     G A+FSI DKQI L GPNS++GR++VVHA
Sbjct: 61  PHFNPAGKEHGAPEDENRHAGDLGNVTVGDDGCASFSITDKQIPLTGPNSIIGRAVVVHA 120

Query: 121 DPDDLGRGGTELSLTTGNAGERIGCGVIGLQ 149
           DPDDLG+GG ELS +TGNAG R+ CG+IGLQ
Sbjct: 121 DPDDLGKGGHELSKSTGNAGGRVACGIIGLQ 151

[Close]

BLAST of CsGy2G003440 vs. TrEMBL
Match: tr|A0A2P5R123|A0A2P5R123_GOSBA (Superoxide dismutase [Cu-Zn] OS=Gossypium barbadense OX=3634 GN=GOBAR_DD22562 PE=3 SV=1)

HSP 1 Score: 245.0 bits (624), Expect = 1.1e-61
Identity = 114/151 (75.50%), Postives = 132/151 (87.42%), Query Frame = 0


Query: 1   MVKAVAVLESNQGVSGSIFFSQNGNGPTIITGNISGLKAGLHGFHVHALGDTTNGCLSTG 60
           MVKAVAVL SN+GVSG++FFSQ G+GPT +TGN+SGLK GLHGFHVHALGDTTNGC+STG
Sbjct: 1   MVKAVAVLSSNEGVSGTVFFSQEGDGPTTVTGNLSGLKPGLHGFHVHALGDTTNGCMSTG 60

Query: 61  PHFNPEGKDHGAPDDENRHVGDLGNVVA---GTATFSIIDKQISLVGPNSVLGRSIVVHA 120
           PHFNP GK+HGAP+DENRH GDLGNV     G A+FSI DKQI L GPNS++GR++VVHA
Sbjct: 61  PHFNPAGKEHGAPEDENRHAGDLGNVTVGDDGCASFSIADKQIPLTGPNSIIGRAVVVHA 120

Query: 121 DPDDLGRGGTELSLTTGNAGERIGCGVIGLQ 149
           DPDDLG+GG ELS +TGNAG R+ CG+IGLQ
Sbjct: 121 DPDDLGKGGHELSKSTGNAGGRVACGIIGLQ 151

[Close]

BLAST of CsGy2G003440 vs. TrEMBL
Match: tr|D2D329|D2D329_GOSHI (Superoxide dismutase [Cu-Zn] OS=Gossypium hirsutum OX=3635 PE=2 SV=1)

HSP 1 Score: 244.6 bits (623), Expect = 1.4e-61
Identity = 114/151 (75.50%), Postives = 132/151 (87.42%), Query Frame = 0


Query: 1   MVKAVAVLESNQGVSGSIFFSQNGNGPTIITGNISGLKAGLHGFHVHALGDTTNGCLSTG 60
           MVKAVAVL SN+GVSG++FFSQ G+GPT +TGN+SGLKAGLHGFHVHALGD TNGC+STG
Sbjct: 1   MVKAVAVLSSNEGVSGTVFFSQEGDGPTTVTGNLSGLKAGLHGFHVHALGDITNGCMSTG 60

Query: 61  PHFNPEGKDHGAPDDENRHVGDLGNVVA---GTATFSIIDKQISLVGPNSVLGRSIVVHA 120
           PHFNP GK+HGAP+DENRH GDLGNV     G A+FSI DKQI L GPNS++GR++VVHA
Sbjct: 61  PHFNPAGKEHGAPEDENRHAGDLGNVTVGDDGCASFSITDKQIPLTGPNSIIGRAVVVHA 120

Query: 121 DPDDLGRGGTELSLTTGNAGERIGCGVIGLQ 149
           DPDDLG+GG ELS +TGNAG R+ CG+IGLQ
Sbjct: 121 DPDDLGKGGHELSKSTGNAGGRVACGIIGLQ 151

The following BLAST results are available for this feature:

BLAST of CsGy2G003440 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_004139207.1	2.8e-77	98.03	PREDICTED: superoxide dismutase [Cu-Zn] 1 [Cucumis sativus] >XP_011648784.1 PRED...	[more]
XP_008455574.1	2.6e-75	96.05	PREDICTED: superoxide dismutase [Cu-Zn] isoform X1 [Cucumis melo]	[more]
XP_022999148.1	1.9e-70	89.47	superoxide dismutase [Cu-Zn] 1-like isoform X2 [Cucurbita maxima]	[more]
XP_022946180.1	9.6e-70	88.82	superoxide dismutase [Cu-Zn]-like isoform X2 [Cucurbita moschata]	[more]
XP_022150819.1	8.1e-69	86.18	superoxide dismutase [Cu-Zn] 1-like isoform X2 [Momordica charantia] >XP_0221508...	[more]

BLAST of CsGy2G003440 vs. TAIR10


Match Name	E-value	Identity	Description
AT1G08830.1	1.3e-60	70.20	copper/zinc superoxide dismutase 1	[more]
AT5G18100.1	3.7e-47	58.00	copper/zinc superoxide dismutase 3	[more]
AT2G28190.1	3.3e-40	66.67	copper/zinc superoxide dismutase 2	[more]
AT1G12520.1	5.4e-06	27.14	copper chaperone for SOD1	[more]

BLAST of CsGy2G003440 vs. Swiss-Prot


Match Name	E-value	Identity	Description
sp\|Q07796\|SODC_IPOBA	6.6e-62	73.51	Superoxide dismutase [Cu-Zn] OS=Ipomoea batatas OX=4120 GN=SODCC PE=2 SV=2	[more]
sp\|P93258\|SODC1_MESCR	1.5e-61	72.85	Superoxide dismutase [Cu-Zn] 1 OS=Mesembryanthemum crystallinum OX=3544 GN=SODCC...	[more]
sp\|P27082\|SODC_NICPL	4.3e-61	71.52	Superoxide dismutase [Cu-Zn] OS=Nicotiana plumbaginifolia OX=4092 GN=SODCC PE=2 ...	[more]
sp\|Q8L5E0\|SODC2_OLEEU	9.5e-61	70.20	Superoxide dismutase [Cu-Zn] 2 OS=Olea europaea OX=4146 GN=OLE5 PE=1 SV=2	[more]
sp\|O49073\|SODC_PAUKA	1.2e-60	72.19	Superoxide dismutase [Cu-Zn] OS=Paulownia kawakamii OX=70770 GN=SODCC PE=2 SV=1	[more]

BLAST of CsGy2G003440 vs. TrEMBL


Match Name	E-value	Identity	Description
tr\|A0A0A0LIH2\|A0A0A0LIH2_CUCSA	1.8e-77	98.03	Superoxide dismutase [Cu-Zn] OS=Cucumis sativus OX=3659 GN=Csa_2G013250 PE=3 SV=...	[more]
tr\|A0A1S3C1D1\|A0A1S3C1D1_CUCME	1.7e-75	96.05	Superoxide dismutase [Cu-Zn] OS=Cucumis melo OX=3656 GN=LOC103495717 PE=3 SV=1	[more]
tr\|A0A0D2U2R5\|A0A0D2U2R5_GOSRA	2.9e-62	76.16	Superoxide dismutase [Cu-Zn] OS=Gossypium raimondii OX=29730 GN=B456_013G192900 ...	[more]
tr\|A0A2P5R123\|A0A2P5R123_GOSBA	1.1e-61	75.50	Superoxide dismutase [Cu-Zn] OS=Gossypium barbadense OX=3634 GN=GOBAR_DD22562 PE...	[more]
tr\|D2D329\|D2D329_GOSHI	1.4e-61	75.50	Superoxide dismutase [Cu-Zn] OS=Gossypium hirsutum OX=3635 PE=2 SV=1	[more]

Annotated Terms

The following terms have been associated with this gene:

Vocabulary: **Biological Process**
Term	Definition
GO:0055114	oxidation-reduction process
GO:0006801	superoxide metabolic process

Vocabulary: **Molecular Function**
Term	Definition
GO:0004784	superoxide dismutase activity
GO:0046872	metal ion binding

Vocabulary: **INTERPRO**
Term	Definition
IPR018152	SOD_Cu/Zn_BS
IPR024134	SOD_Cu/Zn_/chaperone
IPR036423	SOD-like_Cu/Zn_dom_sf
IPR001424	SOD_Cu_Zn_dom

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0055114	oxidation-reduction process
biological_process	GO:0019430	removal of superoxide radicals
biological_process	GO:0090378	seed trichome elongation
biological_process	GO:0006801	superoxide metabolic process
cellular_component	GO:0005829	cytosol
cellular_component	GO:0005615	extracellular space
cellular_component	GO:0005634	nucleus
cellular_component	GO:0005575	cellular_component
molecular_function	GO:0005507	copper ion binding
molecular_function	GO:0004784	superoxide dismutase activity
molecular_function	GO:0008270	zinc ion binding
molecular_function	GO:0046872	metal ion binding

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
CsGy2G003440.1	CsGy2G003440.1	mRNA

InterPro

Analysis Name: InterPro Annotations of cucumber Gy14 genome (v2)
Date Performed: 2018-09-25


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR001424	Superoxide dismutase, copper/zinc binding domain	PRINTS	PR00068	CUZNDISMTASE	coord: 43..65 score: 79.25 coord: 120..146 score: 68.54 coord: 95..117 score: 57.24
IPR001424	Superoxide dismutase, copper/zinc binding domain	PFAM	PF00080	Sod_Cu	coord: 11..145 e-value: 7.7E-47 score: 158.9
IPR001424	Superoxide dismutase, copper/zinc binding domain	CDD	cd00305	Cu-Zn_Superoxide_Dismutase	coord: 2..142 e-value: 2.3355E-56 score: 174.371
IPR036423	Superoxide dismutase-like, copper/zinc binding domain superfamily	GENE3D	G3DSA:2.60.40.200		coord: 1..149 e-value: 1.1E-60 score: 206.3
IPR036423	Superoxide dismutase-like, copper/zinc binding domain superfamily	SUPERFAMILY	SSF49329	Cu,Zn superoxide dismutase-like	coord: 1..147
None	No IPR available	PANTHER	PTHR10003:SF31	SUPEROXIDE DISMUTASE CU-ZN 3	coord: 2..148
IPR024134	Superoxide dismutase (Cu/Zn) / superoxide dismutase copper chaperone	PANTHER	PTHR10003	SUPEROXIDE DISMUTASE CU-ZN -RELATED	coord: 2..148
IPR018152	Superoxide dismutase, copper/zinc, binding site	PROSITE	PS00332	SOD_CU_ZN_2	coord: 134..145
IPR018152	Superoxide dismutase, copper/zinc, binding site	PROSITE	PS00087	SOD_CU_ZN_1	coord: 43..53

Synteny

The following gene(s) are orthologous to this gene:


Gene	Orthologue	Organism	Block
CsGy2G003440	Cla019840	Watermelon (97103) v1	cgybwmB140
CsGy2G003440	Csa2G013250	Cucumber (Chinese Long) v2	cgybcuB056
CsGy2G003440	MELO3C004342	Melon (DHL92) v3.5.1	cgybmeB120
CsGy2G003440	ClCG02G016260	Watermelon (Charleston Gray)	cgybwcgB119
CsGy2G003440	CSPI02G03340	Wild cucumber (PI 183967)	cgybcpiB056
CsGy2G003440	CmaCh05G011720	Cucurbita maxima (Rimu)	cgybcmaB257
CsGy2G003440	CmoCh05G011970	Cucurbita moschata (Rifu)	cgybcmoB243
CsGy2G003440	Lsi11G004820	Bottle gourd (USVL1VR-Ls)	cgyblsiB089
CsGy2G003440	MELO3C004342.2	Melon (DHL92) v3.6.1	cgybmedB118
CsGy2G003440	CsaV3_2G004490	Cucumber (Chinese Long) v3	cgybcucB064
CsGy2G003440	Cla97C02G042100	Watermelon (97103) v2	cgybwmbB114
CsGy2G003440	Bhi06G001484	Wax gourd	cgybwgoB133
CsGy2G003440	Carg23423	Silver-seed gourd	carcgybB0310

The following gene(s) are paralogous to this gene:

None

The following block(s) are covering this gene:


Gene	Organism	Block
CsGy2G003440	Cucurbita pepo (Zucchini)	cgybcpeB168
CsGy2G003440	Cucurbita maxima (Rimu)	cgybcmaB178
CsGy2G003440	Cucurbita moschata (Rifu)	cgybcmoB170
CsGy2G003440	Cucurbita pepo (Zucchini)	cgybcpeB271
CsGy2G003440	Silver-seed gourd	carcgybB0713