CsGy2G003390 (gene) Cucumber (Gy14) v2

Overview
NameCsGy2G003390
Typegene
OrganismCucumis sativus (Cucumber (Gy14) v2)
DescriptionUncharacterized protein
LocationChr2 : 2262511 .. 2263113 (+)
Genome Viewer
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
ATGGCGGATTTTCGATACGGTTTCTTCGTTCGCCCGGACAACAAGAAGATCGAATCAAATCCTGCAGAATTAAAGAGCAAAGCAGGCCATATCTCCGACCCCAAATCCAAGCCACCTTATCTCGATGCCGGAGGAAGGCAACAACCTATTGCCATTCTTCCCCGAACGAGGTACGTTACACCGATCGAGAAATATACTGAAGAAGTTCATACTAAGAAGTATGAACCAGTGAAGAATTCTGATAAAGGGACTTTGAATTCACACCTTGCTATAAACCAGCGTATAGAATTCAATAAACTCTTAGCCAACGTTCAAAAGGAAGCAAGGCTGCCAAAGTATGAAATGAGATTATTAAGTGAACCAATGACTGATATTGGGAAGGCTATAGAGTGTTTGAAAGAAGTTGTGAATCTTGACTGTAGCAAAAATAATGCTTGTGCAGCATCAGCTCGTCGTAAAGACAGTTGCACAAAAACTATTGACAGCAAAGAAGCAGCACGGCGATACGGAAAGTTCGGGGCACCAGTTCCAGTGTCGAATGCTAATGTAGCAACCATTGACTGCAAAGAGGCTGCTAGGAAGTATAATGGTGCAGCAGTGTGA

mRNA sequence

ATGGCGGATTTTCGATACGGTTTCTTCGTTCGCCCGGACAACAAGAAGATCGAATCAAATCCTGCAGAATTAAAGAGCAAAGCAGGCCATATCTCCGACCCCAAATCCAAGCCACCTTATCTCGATGCCGGAGGAAGGCAACAACCTATTGCCATTCTTCCCCGAACGAGGTACGTTACACCGATCGAGAAATATACTGAAGAAGTTCATACTAAGAAGTATGAACCAGTGAAGAATTCTGATAAAGGGACTTTGAATTCACACCTTGCTATAAACCAGCGTATAGAATTCAATAAACTCTTAGCCAACGTTCAAAAGGAAGCAAGGCTGCCAAAGTATGAAATGAGATTATTAAGTGAACCAATGACTGATATTGGGAAGGCTATAGAGTGTTTGAAAGAAGTTGTGAATCTTGACTGTAGCAAAAATAATGCTTGTGCAGCATCAGCTCGTCGTAAAGACAGTTGCACAAAAACTATTGACAGCAAAGAAGCAGCACGGCGATACGGAAAGTTCGGGGCACCAGTTCCAGTGTCGAATGCTAATGTAGCAACCATTGACTGCAAAGAGGCTGCTAGGAAGTATAATGGTGCAGCAGTGTGA

Coding sequence (CDS)

ATGGCGGATTTTCGATACGGTTTCTTCGTTCGCCCGGACAACAAGAAGATCGAATCAAATCCTGCAGAATTAAAGAGCAAAGCAGGCCATATCTCCGACCCCAAATCCAAGCCACCTTATCTCGATGCCGGAGGAAGGCAACAACCTATTGCCATTCTTCCCCGAACGAGGTACGTTACACCGATCGAGAAATATACTGAAGAAGTTCATACTAAGAAGTATGAACCAGTGAAGAATTCTGATAAAGGGACTTTGAATTCACACCTTGCTATAAACCAGCGTATAGAATTCAATAAACTCTTAGCCAACGTTCAAAAGGAAGCAAGGCTGCCAAAGTATGAAATGAGATTATTAAGTGAACCAATGACTGATATTGGGAAGGCTATAGAGTGTTTGAAAGAAGTTGTGAATCTTGACTGTAGCAAAAATAATGCTTGTGCAGCATCAGCTCGTCGTAAAGACAGTTGCACAAAAACTATTGACAGCAAAGAAGCAGCACGGCGATACGGAAAGTTCGGGGCACCAGTTCCAGTGTCGAATGCTAATGTAGCAACCATTGACTGCAAAGAGGCTGCTAGGAAGTATAATGGTGCAGCAGTGTGA

Protein sequence

MADFRYGFFVRPDNKKIESNPAELKSKAGHISDPKSKPPYLDAGGRQQPIAILPRTRYVTPIEKYTEEVHTKKYEPVKNSDKGTLNSHLAINQRIEFNKLLANVQKEARLPKYEMRLLSEPMTDIGKAIECLKEVVNLDCSKNNACAASARRKDSCTKTIDSKEAARRYGKFGAPVPVSNANVATIDCKEAARKYNGAAV
Homology
[Close]
BLAST of CsGy2G003390 vs. NCBI nr
Match: KGN60838.1 (hypothetical protein Csa_2G012700 [Cucumis sativus])

HSP 1 Score: 366.3 bits (939), Expect = 6.6e-98
Identity = 200/200 (100.00%), Postives = 200/200 (100.00%), Query Frame = 0 

Query: 1   MADFRYGFFVRPDNKKIESNPAELKSKAGHISDPKSKPPYLDAGGRQQPIAILPRTRYVT 60
           MADFRYGFFVRPDNKKIESNPAELKSKAGHISDPKSKPPYLDAGGRQQPIAILPRTRYVT
Sbjct: 1   MADFRYGFFVRPDNKKIESNPAELKSKAGHISDPKSKPPYLDAGGRQQPIAILPRTRYVT 60

Query: 61  PIEKYTEEVHTKKYEPVKNSDKGTLNSHLAINQRIEFNKLLANVQKEARLPKYEMRLLSE 120
           PIEKYTEEVHTKKYEPVKNSDKGTLNSHLAINQRIEFNKLLANVQKEARLPKYEMRLLSE
Sbjct: 61  PIEKYTEEVHTKKYEPVKNSDKGTLNSHLAINQRIEFNKLLANVQKEARLPKYEMRLLSE 120

Query: 121 PMTDIGKAIECLKEVVNLDCSKNNACAASARRKDSCTKTIDSKEAARRYGKFGAPVPVSN 180
           PMTDIGKAIECLKEVVNLDCSKNNACAASARRKDSCTKTIDSKEAARRYGKFGAPVPVSN
Sbjct: 121 PMTDIGKAIECLKEVVNLDCSKNNACAASARRKDSCTKTIDSKEAARRYGKFGAPVPVSN 180

Query: 181 ANXXXXXXXXXXXXXXGAAV 201
           ANXXXXXXXXXXXXXXGAAV
Sbjct: 181 ANXXXXXXXXXXXXXXGAAV 200

[Close]
BLAST of CsGy2G003390 vs. NCBI nr
Match: ADN33904.1 (hypothetical protein [Cucumis melo subsp. melo])

HSP 1 Score: 305.1 bits (780), Expect = 1.8e-79
Identity = 155/182 (85.16%), Postives = 165/182 (90.66%), Query Frame = 0 

Query: 1   MADFRYGFFVRPDNKKIESNPAELKSKAGHISDPKSKPPYLDAGGRQQPIAILPRTRYVT 60
           MADFRYGFFVRPDNKKIESNP E KS+AGHIS+PKSKPP LD GGRQ+P AILPRTRYVT
Sbjct: 1   MADFRYGFFVRPDNKKIESNPEE-KSRAGHISNPKSKPPNLDVGGRQRPTAILPRTRYVT 60

Query: 61  PIEKYTEEVHTKKYEPVKNSDKGTLNSHLAINQRIEFNKLLANVQKEARLPKYEMRLLSE 120
           PIEK+TEEVHTKKYEP+KNSDKGTL+S+LAINQRIEFNKLLA  Q+E RLPKYEMRLLSE
Sbjct: 61  PIEKHTEEVHTKKYEPMKNSDKGTLDSNLAINQRIEFNKLLAKAQEEVRLPKYEMRLLSE 120

Query: 121 PMTDIGKAIECLKEVVNLDCSKNNACAASARRKDSCTKTIDSKEAARRYGKFGAPVPVSN 180
           PM DIGKAIECLKE VNLDCSKNNAC+AS   KDSCTKTIDSKEAARRYG FGA   VS+
Sbjct: 121 PMNDIGKAIECLKEAVNLDCSKNNACSASYHHKDSCTKTIDSKEAARRYGTFGALGRVSS 180

Query: 181 AN 183
           AN
Sbjct: 181 AN 181

[Close]
BLAST of CsGy2G003390 vs. TrEMBL
Match: tr|A0A0A0LG87|A0A0A0LG87_CUCSA (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_2G012700 PE=4 SV=1)

HSP 1 Score: 366.3 bits (939), Expect = 4.3e-98
Identity = 200/200 (100.00%), Postives = 200/200 (100.00%), Query Frame = 0 

Query: 1   MADFRYGFFVRPDNKKIESNPAELKSKAGHISDPKSKPPYLDAGGRQQPIAILPRTRYVT 60
           MADFRYGFFVRPDNKKIESNPAELKSKAGHISDPKSKPPYLDAGGRQQPIAILPRTRYVT
Sbjct: 1   MADFRYGFFVRPDNKKIESNPAELKSKAGHISDPKSKPPYLDAGGRQQPIAILPRTRYVT 60

Query: 61  PIEKYTEEVHTKKYEPVKNSDKGTLNSHLAINQRIEFNKLLANVQKEARLPKYEMRLLSE 120
           PIEKYTEEVHTKKYEPVKNSDKGTLNSHLAINQRIEFNKLLANVQKEARLPKYEMRLLSE
Sbjct: 61  PIEKYTEEVHTKKYEPVKNSDKGTLNSHLAINQRIEFNKLLANVQKEARLPKYEMRLLSE 120

Query: 121 PMTDIGKAIECLKEVVNLDCSKNNACAASARRKDSCTKTIDSKEAARRYGKFGAPVPVSN 180
           PMTDIGKAIECLKEVVNLDCSKNNACAASARRKDSCTKTIDSKEAARRYGKFGAPVPVSN
Sbjct: 121 PMTDIGKAIECLKEVVNLDCSKNNACAASARRKDSCTKTIDSKEAARRYGKFGAPVPVSN 180

Query: 181 ANXXXXXXXXXXXXXXGAAV 201
           ANXXXXXXXXXXXXXXGAAV
Sbjct: 181 ANXXXXXXXXXXXXXXGAAV 200

[Close]
BLAST of CsGy2G003390 vs. TrEMBL
Match: tr|E5GBR2|E5GBR2_CUCME (Uncharacterized protein OS=Cucumis melo subsp. melo OX=412675 PE=4 SV=1)

HSP 1 Score: 305.1 bits (780), Expect = 1.2e-79
Identity = 155/182 (85.16%), Postives = 165/182 (90.66%), Query Frame = 0 

Query: 1   MADFRYGFFVRPDNKKIESNPAELKSKAGHISDPKSKPPYLDAGGRQQPIAILPRTRYVT 60
           MADFRYGFFVRPDNKKIESNP E KS+AGHIS+PKSKPP LD GGRQ+P AILPRTRYVT
Sbjct: 1   MADFRYGFFVRPDNKKIESNPEE-KSRAGHISNPKSKPPNLDVGGRQRPTAILPRTRYVT 60

Query: 61  PIEKYTEEVHTKKYEPVKNSDKGTLNSHLAINQRIEFNKLLANVQKEARLPKYEMRLLSE 120
           PIEK+TEEVHTKKYEP+KNSDKGTL+S+LAINQRIEFNKLLA  Q+E RLPKYEMRLLSE
Sbjct: 61  PIEKHTEEVHTKKYEPMKNSDKGTLDSNLAINQRIEFNKLLAKAQEEVRLPKYEMRLLSE 120

Query: 121 PMTDIGKAIECLKEVVNLDCSKNNACAASARRKDSCTKTIDSKEAARRYGKFGAPVPVSN 180
           PM DIGKAIECLKE VNLDCSKNNAC+AS   KDSCTKTIDSKEAARRYG FGA   VS+
Sbjct: 121 PMNDIGKAIECLKEAVNLDCSKNNACSASYHHKDSCTKTIDSKEAARRYGTFGALGRVSS 180

Query: 181 AN 183
           AN
Sbjct: 181 AN 181

The following BLAST results are available for this feature:
BLAST of CsGy2G003390 vs. NCBI nr
Match NameE-valueIdentityDescription
KGN60838.16.6e-98100.00hypothetical protein Csa_2G012700 [Cucumis sativus][more]
ADN33904.11.8e-7985.16hypothetical protein [Cucumis melo subsp. melo][more]
BLAST of CsGy2G003390 vs. TAIR10
Match NameE-valueIdentityDescription
BLAST of CsGy2G003390 vs. Swiss-Prot
Match NameE-valueIdentityDescription
BLAST of CsGy2G003390 vs. TrEMBL
Match NameE-valueIdentityDescription
tr|A0A0A0LG87|A0A0A0LG87_CUCSA4.3e-98100.00Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_2G012700 PE=4 SV=1[more]
tr|E5GBR2|E5GBR2_CUCME1.2e-7985.16Uncharacterized protein OS=Cucumis melo subsp. melo OX=412675 PE=4 SV=1[more]
GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
Category Term Accession Term Name
biological_process GO:0008150 biological_process
cellular_component GO:0005575 cellular_component
molecular_function GO:0003674 molecular_function
Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
CsGy2G003390.1CsGy2G003390.1mRNA


InterPro
Analysis Name: InterPro Annotations of cucumber Gy14 genome (v2)
Date Performed: 2018-09-25
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 19..46