CsGy2G001290 (gene) Cucumber (Gy14) v2

Overview
NameCsGy2G001290
Typegene
OrganismCucumis sativus (Cucumber (Gy14) v2)
DescriptionUncharacterized protein
LocationChr2 : 834319 .. 834525 (+)
Genome Viewer
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
ATGCTGCCGGCGCCGGTACAGCTAAATCTACAAAATTCACTCGGTAATTTCGTCGAACACCTTCCGAGCAAAAAAAATAAAGCTGTAAAACTCCGGTCACCCGTGCCGGCGCCGGTGTACGATCACTTTATAACTATTGGGCAACCCGATATTCAAACCGGAAAATCGCTGGCAGCGTCCGAAAAATCAACTGAGTTCTGTCGGTAA

mRNA sequence

ATGCTGCCGGCGCCGGTACAGCTAAATCTACAAAATTCACTCGGTAATTTCGTCGAACACCTTCCGAGCAAAAAAAATAAAGCTGTAAAACTCCGGTCACCCGTGCCGGCGCCGGTGTACGATCACTTTATAACTATTGGGCAACCCGATATTCAAACCGGAAAATCGCTGGCAGCGTCCGAAAAATCAACTGAGTTCTGTCGGTAA

Coding sequence (CDS)

ATGCTGCCGGCGCCGGTACAGCTAAATCTACAAAATTCACTCGGTAATTTCGTCGAACACCTTCCGAGCAAAAAAAATAAAGCTGTAAAACTCCGGTCACCCGTGCCGGCGCCGGTGTACGATCACTTTATAACTATTGGGCAACCCGATATTCAAACCGGAAAATCGCTGGCAGCGTCCGAAAAATCAACTGAGTTCTGTCGGTAA

Protein sequence

MLPAPVQLNLQNSLGNFVEHLPSKKNKAVKLRSPVPAPVYDHFITIGQPDIQTGKSLAASEKSTEFCR
Homology
[Close]
BLAST of CsGy2G001290 vs. NCBI nr
Match: KGN60628.1 (hypothetical protein Csa_2G004770 [Cucumis sativus])

HSP 1 Score: 141.7 bits (356), Expect = 8.9e-31
Identity = 68/68 (100.00%), Postives = 68/68 (100.00%), Query Frame = 0 

Query: 1  MLPAPVQLNLQNSLGNFVEHLPSKKNKAVKLRSPVPAPVYDHFITIGQPDIQTGKSLAAS 60
          MLPAPVQLNLQNSLGNFVEHLPSKKNKAVKLRSPVPAPVYDHFITIGQPDIQTGKSLAAS
Sbjct: 1  MLPAPVQLNLQNSLGNFVEHLPSKKNKAVKLRSPVPAPVYDHFITIGQPDIQTGKSLAAS 60

Query: 61 EKSTEFCR 69
          EKSTEFCR
Sbjct: 61 EKSTEFCR 68

[Close]
BLAST of CsGy2G001290 vs. TrEMBL
Match: tr|A0A0A0LFW1|A0A0A0LFW1_CUCSA (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_2G004770 PE=4 SV=1)

HSP 1 Score: 141.7 bits (356), Expect = 5.9e-31
Identity = 68/68 (100.00%), Postives = 68/68 (100.00%), Query Frame = 0 

Query: 1  MLPAPVQLNLQNSLGNFVEHLPSKKNKAVKLRSPVPAPVYDHFITIGQPDIQTGKSLAAS 60
          MLPAPVQLNLQNSLGNFVEHLPSKKNKAVKLRSPVPAPVYDHFITIGQPDIQTGKSLAAS
Sbjct: 1  MLPAPVQLNLQNSLGNFVEHLPSKKNKAVKLRSPVPAPVYDHFITIGQPDIQTGKSLAAS 60

Query: 61 EKSTEFCR 69
          EKSTEFCR
Sbjct: 61 EKSTEFCR 68

The following BLAST results are available for this feature:
BLAST of CsGy2G001290 vs. NCBI nr
Match NameE-valueIdentityDescription
KGN60628.18.9e-31100.00hypothetical protein Csa_2G004770 [Cucumis sativus][more]
BLAST of CsGy2G001290 vs. TAIR10
Match NameE-valueIdentityDescription
BLAST of CsGy2G001290 vs. Swiss-Prot
Match NameE-valueIdentityDescription
BLAST of CsGy2G001290 vs. TrEMBL
Match NameE-valueIdentityDescription
tr|A0A0A0LFW1|A0A0A0LFW1_CUCSA5.9e-31100.00Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_2G004770 PE=4 SV=1[more]
GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
Category Term Accession Term Name
biological_process GO:0008150 biological_process
cellular_component GO:0005575 cellular_component
molecular_function GO:0003674 molecular_function
Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
CsGy2G001290.1CsGy2G001290.1mRNA


Synteny
The following gene(s) are orthologous to this gene:
GeneOrthologueOrganismBlock
CsGy2G001290Csa2G004770Cucumber (Chinese Long) v2cgybcuB056
CsGy2G001290CSPI02G01260Wild cucumber (PI 183967)cgybcpiB056
CsGy2G001290CsaV3_2G002360Cucumber (Chinese Long) v3cgybcucB064
The following gene(s) are paralogous to this gene:

None

The following block(s) are covering this gene:
GeneOrganismBlock
CsGy2G001290Cucurbita pepo (Zucchini)cgybcpeB168
CsGy2G001290Cucurbita maxima (Rimu)cgybcmaB154
CsGy2G001290Cucurbita maxima (Rimu)cgybcmaB163
CsGy2G001290Cucurbita maxima (Rimu)cgybcmaB178
CsGy2G001290Cucurbita maxima (Rimu)cgybcmaB257
CsGy2G001290Cucurbita moschata (Rifu)cgybcmoB146
CsGy2G001290Cucurbita moschata (Rifu)cgybcmoB155
CsGy2G001290Cucurbita moschata (Rifu)cgybcmoB170
CsGy2G001290Cucurbita moschata (Rifu)cgybcmoB243
CsGy2G001290Cucurbita pepo (Zucchini)cgybcpeB204
CsGy2G001290Cucurbita pepo (Zucchini)cgybcpeB232
CsGy2G001290Cucurbita pepo (Zucchini)cgybcpeB272
CsGy2G001290Bottle gourd (USVL1VR-Ls)cgyblsiB089
CsGy2G001290Bottle gourd (USVL1VR-Ls)cgyblsiB120
CsGy2G001290Melon (DHL92) v3.5.1cgybmeB095
CsGy2G001290Melon (DHL92) v3.5.1cgybmeB121
CsGy2G001290Melon (DHL92) v3.6.1cgybmedB096
CsGy2G001290Melon (DHL92) v3.6.1cgybmedB119
CsGy2G001290Watermelon (Charleston Gray)cgybwcgB094
CsGy2G001290Watermelon (Charleston Gray)cgybwcgB140
CsGy2G001290Watermelon (97103) v1cgybwmB154
CsGy2G001290Watermelon (97103) v1cgybwmB161
CsGy2G001290Silver-seed gourdcarcgybB0041
CsGy2G001290Silver-seed gourdcarcgybB0137
CsGy2G001290Silver-seed gourdcarcgybB0292
CsGy2G001290Silver-seed gourdcarcgybB0573
CsGy2G001290Cucumber (Chinese Long) v3cgybcucB059
CsGy2G001290Watermelon (97103) v2cgybwmbB098
CsGy2G001290Watermelon (97103) v2cgybwmbB136
CsGy2G001290Wax gourdcgybwgoB127
CsGy2G001290Wax gourdcgybwgoB205