CsGy2G000420 (gene) Cucumber (Gy14) v2
The following sequences are available for this feature:
Legend: exonCDS Hold the cursor over a type above to highlight its positions in the sequence below.ATGGAGGAATCGCGGAAGACCCATGACTTTGTTCGAACCGAGGCGTCCACGGAGAAGACGGAGGATATGGACGATGACATTCTGGCTTGGATTTCGTTGGAAGATGAGACAGTAGGCGAACTCATGATGCTTCTGGATGACGAGGAGAAAAGCCGTCCGGTGGAGGAGAAAGTGAAGTTCATCGAGGATCCGTACTCATCGGCGGTGGTTTTTCAATCGTCTTCCTCGTACGTGACTATCAACGGAAACGAAGAGAGTTGCGGTTCATCTTTCTCTGAATCGGACTCGTCGATGATGGCGAGCGTGGACATGAACGGAGCGAGGATTAAAGTGATGGAAATCGATTGTGAAACTGTCGATAAATGGAAGATGTGGAGCGAGGAGAGGTTGATGAAGGAGGAAGAGGAAGTGTCGGGTGTATCGGAGGGAATCATGAGTTGGGATGAAGATGATTTAGCGAGGTTCATCGGCGACGAAGAATAG ATGGAGGAATCGCGGAAGACCCATGACTTTGTTCGAACCGAGGCGTCCACGGAGAAGACGGAGGATATGGACGATGACATTCTGGCTTGGATTTCGTTGGAAGATGAGACAGTAGGCGAACTCATGATGCTTCTGGATGACGAGGAGAAAAGCCGTCCGGTGGAGGAGAAAGTGAAGTTCATCGAGGATCCGTACTCATCGGCGGTGGTTTTTCAATCGTCTTCCTCGTACGTGACTATCAACGGAAACGAAGAGAGTTGCGGTTCATCTTTCTCTGAATCGGACTCGTCGATGATGGCGAGCGTGGACATGAACGGAGCGAGGATTAAAGTGATGGAAATCGATTGTGAAACTGTCGATAAATGGAAGATGTGGAGCGAGGAGAGGTTGATGAAGGAGGAAGAGGAAGTGTCGGGTGTATCGGAGGGAATCATGAGTTGGGATGAAGATGATTTAGCGAGGTTCATCGGCGACGAAGAATAG ATGGAGGAATCGCGGAAGACCCATGACTTTGTTCGAACCGAGGCGTCCACGGAGAAGACGGAGGATATGGACGATGACATTCTGGCTTGGATTTCGTTGGAAGATGAGACAGTAGGCGAACTCATGATGCTTCTGGATGACGAGGAGAAAAGCCGTCCGGTGGAGGAGAAAGTGAAGTTCATCGAGGATCCGTACTCATCGGCGGTGGTTTTTCAATCGTCTTCCTCGTACGTGACTATCAACGGAAACGAAGAGAGTTGCGGTTCATCTTTCTCTGAATCGGACTCGTCGATGATGGCGAGCGTGGACATGAACGGAGCGAGGATTAAAGTGATGGAAATCGATTGTGAAACTGTCGATAAATGGAAGATGTGGAGCGAGGAGAGGTTGATGAAGGAGGAAGAGGAAGTGTCGGGTGTATCGGAGGGAATCATGAGTTGGGATGAAGATGATTTAGCGAGGTTCATCGGCGACGAAGAATAG MEESRKTHDFVRTEASTEKTEDMDDDILAWISLEDETVGELMMLLDDEEKSRPVEEKVKFIEDPYSSAVVFQSSSSYVTINGNEESCGSSFSESDSSMMASVDMNGARIKVMEIDCETVDKWKMWSEERLMKEEEEVSGVSEGIMSWDEDDLARFIGDEE
BLAST of CsGy2G000420 vs. NCBI nr
Match: XP_011648606.1 (PREDICTED: uncharacterized protein LOC105434536 [Cucumis sativus] >KGN60537.1 hypothetical protein Csa_2G000450 [Cucumis sativus]) HSP 1 Score: 306.6 bits (784), Expect = 4.9e-80 Identity = 160/160 (100.00%), Postives = 160/160 (100.00%), Query Frame = 0
BLAST of CsGy2G000420 vs. NCBI nr
Match: XP_008459356.1 (PREDICTED: uncharacterized protein LOC103498512 [Cucumis melo]) HSP 1 Score: 273.5 bits (698), Expect = 4.6e-70 Identity = 147/167 (88.02%), Postives = 155/167 (92.81%), Query Frame = 0
BLAST of CsGy2G000420 vs. NCBI nr
Match: XP_022965986.1 (uncharacterized protein LOC111465706 [Cucurbita maxima]) HSP 1 Score: 220.3 bits (560), Expect = 4.7e-54 Identity = 122/167 (73.05%), Postives = 138/167 (82.63%), Query Frame = 0
BLAST of CsGy2G000420 vs. NCBI nr
Match: XP_023538157.1 (uncharacterized protein LOC111799012 [Cucurbita pepo subsp. pepo]) HSP 1 Score: 220.3 bits (560), Expect = 4.7e-54 Identity = 122/167 (73.05%), Postives = 138/167 (82.63%), Query Frame = 0
BLAST of CsGy2G000420 vs. NCBI nr
Match: XP_022938092.1 (uncharacterized protein LOC111444281 [Cucurbita moschata]) HSP 1 Score: 219.9 bits (559), Expect = 6.1e-54 Identity = 121/167 (72.46%), Postives = 138/167 (82.63%), Query Frame = 0
BLAST of CsGy2G000420 vs. TAIR10
Match: AT5G56880.1 (unknown protein) HSP 1 Score: 72.8 bits (177), Expect = 2.2e-13 Identity = 62/171 (36.26%), Postives = 85/171 (49.71%), Query Frame = 0
BLAST of CsGy2G000420 vs. TrEMBL
Match: tr|A0A0A0LIN0|A0A0A0LIN0_CUCSA (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_2G000450 PE=4 SV=1) HSP 1 Score: 306.6 bits (784), Expect = 3.3e-80 Identity = 160/160 (100.00%), Postives = 160/160 (100.00%), Query Frame = 0
BLAST of CsGy2G000420 vs. TrEMBL
Match: tr|A0A1S3CB71|A0A1S3CB71_CUCME (uncharacterized protein LOC103498512 OS=Cucumis melo OX=3656 GN=LOC103498512 PE=4 SV=1) HSP 1 Score: 273.5 bits (698), Expect = 3.1e-70 Identity = 147/167 (88.02%), Postives = 155/167 (92.81%), Query Frame = 0
BLAST of CsGy2G000420 vs. TrEMBL
Match: tr|A0A1R3HAE5|A0A1R3HAE5_COCAP (Uncharacterized protein OS=Corchorus capsularis OX=210143 GN=CCACVL1_20630 PE=4 SV=1) HSP 1 Score: 114.0 bits (284), Expect = 3.1e-22 Identity = 72/147 (48.98%), Postives = 99/147 (67.35%), Query Frame = 0
BLAST of CsGy2G000420 vs. TrEMBL
Match: tr|A0A1R3JA05|A0A1R3JA05_9ROSI (Uncharacterized protein OS=Corchorus olitorius OX=93759 GN=COLO4_18199 PE=4 SV=1) HSP 1 Score: 108.2 bits (269), Expect = 1.7e-20 Identity = 71/151 (47.02%), Postives = 98/151 (64.90%), Query Frame = 0
BLAST of CsGy2G000420 vs. TrEMBL
Match: tr|A0A1U8LYK5|A0A1U8LYK5_GOSHI (uncharacterized protein LOC107932221 OS=Gossypium hirsutum OX=3635 GN=LOC107932221 PE=4 SV=1) HSP 1 Score: 106.3 bits (264), Expect = 6.5e-20 Identity = 71/155 (45.81%), Postives = 94/155 (60.65%), Query Frame = 0
The following BLAST results are available for this feature:
GO Assignments
This gene is annotated with the following GO terms.
The following mRNA feature(s) are a part of this gene:
Analysis Name: InterPro Annotations of cucumber Gy14 genome (v2)
Date Performed: 2018-09-25
The following gene(s) are orthologous to this gene:
The following gene(s) are paralogous to this gene: None The following block(s) are covering this gene: |