ClCG11G001750 (gene) Watermelon (Charleston Gray)

NameClCG11G001750
Typegene
OrganismCitrullus lanatus (Watermelon (Charleston Gray))
DescriptionUnknown protein
LocationCG_Chr11 : 1907111 .. 1907617 (+)
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: polypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
ATGGAAGAATCGCTGAAGAGCCGTGAGTTTTTTCCACCGGAGGCCTCGGCGAAGAAGATGCCGCGAGCGGCGGCGGAAGAGGCGGAGGATATGGACGACGACATTCTCGCGTGGATTTCGGTTGAAGAGGAGACAGTAGGCGAACTCATGATGCTTCTTGACGATGCAGAGAAAAGCCGTCCGATGGAGGAGAAAGTGAAGTTCATCGACGATCCGTACTCATCGGCGGTGATTTTTCAATCGTCGTCGTCTTACGTGACTATCAACGGAAACGAAGAGAGTTGTGGTTCGTCTTTCTCCGAATCGGACTCGTCGATGATGGCGAGCGTCGATATGAACGGAGCAAGGATTAAACTGATGGAAATCGATTCTGAAACTGTTGAGAAATGGAAGATGTGGAGCGAGGATGGGTTGAAGGAGGAGGAGGCGTCAGCCGTATTGGACGGAATCAGTTGGGATGAAGATGATTTAGCGAGGTTCATCGGGGATGAAGAACTAATTTTCTGA

mRNA sequence

ATGGAAGAATCGCTGAAGAGCCGTGAGTTTTTTCCACCGGAGGCCTCGGCGAAGAAGATGCCGCGAGCGGCGGCGGAAGAGGCGGAGGATATGGACGACGACATTCTCGCGTGGATTTCGGTTGAAGAGGAGACAGTAGGCGAACTCATGATGCTTCTTGACGATGCAGAGAAAAGCCGTCCGATGGAGGAGAAAGTGAAGTTCATCGACGATCCGTACTCATCGGCGGTGATTTTTCAATCGTCGTCGTCTTACGTGACTATCAACGGAAACGAAGAGAGTTGTGGTTCGTCTTTCTCCGAATCGGACTCGTCGATGATGGCGAGCGTCGATATGAACGGAGCAAGGATTAAACTGATGGAAATCGATTCTGAAACTGTTGAGAAATGGAAGATGTGGAGCGAGGATGGGTTGAAGGAGGAGGAGGCGTCAGCCGTATTGGACGGAATCAGTTGGGATGAAGATGATTTAGCGAGGTTCATCGGGGATGAAGAACTAATTTTCTGA

Coding sequence (CDS)

ATGGAAGAATCGCTGAAGAGCCGTGAGTTTTTTCCACCGGAGGCCTCGGCGAAGAAGATGCCGCGAGCGGCGGCGGAAGAGGCGGAGGATATGGACGACGACATTCTCGCGTGGATTTCGGTTGAAGAGGAGACAGTAGGCGAACTCATGATGCTTCTTGACGATGCAGAGAAAAGCCGTCCGATGGAGGAGAAAGTGAAGTTCATCGACGATCCGTACTCATCGGCGGTGATTTTTCAATCGTCGTCGTCTTACGTGACTATCAACGGAAACGAAGAGAGTTGTGGTTCGTCTTTCTCCGAATCGGACTCGTCGATGATGGCGAGCGTCGATATGAACGGAGCAAGGATTAAACTGATGGAAATCGATTCTGAAACTGTTGAGAAATGGAAGATGTGGAGCGAGGATGGGTTGAAGGAGGAGGAGGCGTCAGCCGTATTGGACGGAATCAGTTGGGATGAAGATGATTTAGCGAGGTTCATCGGGGATGAAGAACTAATTTTCTGA

Protein sequence

MEESLKSREFFPPEASAKKMPRAAAEEAEDMDDDILAWISVEEETVGELMMLLDDAEKSRPMEEKVKFIDDPYSSAVIFQSSSSYVTINGNEESCGSSFSESDSSMMASVDMNGARIKLMEIDSETVEKWKMWSEDGLKEEEASAVLDGISWDEDDLARFIGDEELIF
BLAST of ClCG11G001750 vs. TrEMBL
Match: A0A0A0LIN0_CUCSA (Uncharacterized protein OS=Cucumis sativus GN=Csa_2G000450 PE=4 SV=1)

HSP 1 Score: 249.6 bits (636), Expect = 2.7e-63
Identity = 131/168 (77.98%), Postives = 144/168 (85.71%), Query Frame = 1

Query: 1   MEESLKSREFFPPEASAKKMPRAAAEEAEDMDDDILAWISVEEETVGELMMLLDDAEKSR 60
           MEES K+ +F   EAS +K         EDMDDDILAWIS+E+ETVGELMMLLDD EKSR
Sbjct: 1   MEESRKTHDFVRTEASTEK--------TEDMDDDILAWISLEDETVGELMMLLDDEEKSR 60

Query: 61  PMEEKVKFIDDPYSSAVIFQSSSSYVTINGNEESCGSSFSESDSSMMASVDMNGARIKLM 120
           P+EEKVKFI+DPYSSAV+FQSSSSYVTINGNEESCGSSFSESDSSMMASVDMNGARIK+M
Sbjct: 61  PVEEKVKFIEDPYSSAVVFQSSSSYVTINGNEESCGSSFSESDSSMMASVDMNGARIKVM 120

Query: 121 EIDSETVEKWKMWSEDGL--KEEEASAVLDGI-SWDEDDLARFIGDEE 166
           EID ETV+KWKMWSE+ L  +EEE S V +GI SWDEDDLARFIGDEE
Sbjct: 121 EIDCETVDKWKMWSEERLMKEEEEVSGVSEGIMSWDEDDLARFIGDEE 160

BLAST of ClCG11G001750 vs. TrEMBL
Match: A0A0D2LT56_GOSRA (Uncharacterized protein OS=Gossypium raimondii GN=B456_001G011900 PE=4 SV=1)

HSP 1 Score: 123.6 bits (309), Expect = 2.2e-25
Identity = 80/185 (43.24%), Postives = 106/185 (57.30%), Query Frame = 1

Query: 1   MEESLKSREFFPPEASAKKMPRAAAEEAE-DMDDDILAWISVE----EETVGELMMLLDD 60
           ME+   + E    E+ A K  R A E  E +  DD+L W+S+E     + + EL  L+DD
Sbjct: 1   MEKKRATEEDTGDESPATKRRREAPETVEFNGYDDVLPWLSMEGTCKTDAMSELFKLVDD 60

Query: 61  AEKSRPMEE--------KVKFIDDPYSSAVIFQSSSSYVTINGNEESCGSSFSESDSSMM 120
           + +  P           KVKF D+PYSSA+IFQSSSSYVTINGNEESCGSSFS+S+SS+M
Sbjct: 61  STELAPSSTCSPTSYCTKVKFSDNPYSSALIFQSSSSYVTINGNEESCGSSFSDSESSVM 120

Query: 121 ASVDMNGARIKLMEIDS--ETVEKW------KMWSEDGLKEEEASAVLDGISWDEDDLAR 165
           ASVDM G     ++ D+  E +  W        W +   +  E   V     WDE+ LAR
Sbjct: 121 ASVDMRGIVSTNVKFDNGLEEIRGWLEAEEGSAWGKSEGESRETWTV--DWEWDEEQLAR 180

BLAST of ClCG11G001750 vs. TrEMBL
Match: V4UQI5_9ROSI (Uncharacterized protein OS=Citrus clementina GN=CICLE_v10010560mg PE=4 SV=1)

HSP 1 Score: 120.6 bits (301), Expect = 1.9e-24
Identity = 75/171 (43.86%), Postives = 103/171 (60.23%), Query Frame = 1

Query: 15  ASAKKMPRAAAEEAED----MDDDILAWISVEEETVGELMMLLD----DAEKSRPMEEKV 74
           ++A KMPRA  E+  D    + DDI+AW+S++++T+ +LM LLD    +A+ +     +V
Sbjct: 21  SAALKMPRATLEDGGDGGGDLGDDIMAWLSMDDDTMSQLMNLLDTSPPNADSATARTTRV 80

Query: 75  KFIDDPYSSAVIFQSSSSYVTINGNEESCGSSFSESDSSMMASVDMNGARIKLMEIDSET 134
           KFID+PY S VIFQSSSSYVTINGNEESCGSSFS+S+SS+M SVD  G         S+ 
Sbjct: 81  KFIDNPYKSLVIFQSSSSYVTINGNEESCGSSFSDSESSVMVSVDTAGIVKSFPTRGSQR 140

Query: 135 VEKWKMWSED---------GLKEEEASAVLDGISW-DEDD--LARFIGDEE 166
             +   WS +         G  E E   ++DG    D DD  L +F+  E+
Sbjct: 141 DCEVSAWSSNEEEKEVGGFGFFEGEGGEIMDGCDGSDLDDYVLPKFLVQEQ 191

BLAST of ClCG11G001750 vs. TrEMBL
Match: A0A061GTJ0_THECC (Uncharacterized protein OS=Theobroma cacao GN=TCM_037661 PE=4 SV=1)

HSP 1 Score: 119.8 bits (299), Expect = 3.2e-24
Identity = 72/160 (45.00%), Postives = 100/160 (62.50%), Query Frame = 1

Query: 29  EDMDDDILAWISVEE---ETVGELMMLLDDAEKSRPMEE-----------KVKFIDDPYS 88
           +++ DD+ AW+SVE+   ++V EL+ LLDD+ +                 +V+F D+PYS
Sbjct: 31  DELADDVKAWLSVEDSETDSVSELLKLLDDSPEDTTSASSSTSSPTLFGMRVRFSDNPYS 90

Query: 89  SAVIFQSSSSYVTINGNEESCGSSFSESDSSMMASVDMNGARIKLMEIDSETVEKWKMWS 148
           SA+IFQSSSSY+TINGNEESCGSSFSES+SS+MASVDM G     +++ S  +E  + W 
Sbjct: 91  SALIFQSSSSYITINGNEESCGSSFSESESSVMASVDMGGILNANVKVGSR-LEGIRGWV 150

Query: 149 E--------DGLKEEEASAVLD-GISWDEDDLARFIGDEE 166
           E        D  +EE    ++D    WDE  L RF+G+EE
Sbjct: 151 EAEGGGGAWDRSEEEARGWMMDWEWEWDEKQLVRFLGEEE 189

BLAST of ClCG11G001750 vs. TrEMBL
Match: A0A067F2T1_CITSI (Uncharacterized protein OS=Citrus sinensis GN=CISIN_1g029127mg PE=4 SV=1)

HSP 1 Score: 117.9 bits (294), Expect = 1.2e-23
Identity = 74/171 (43.27%), Postives = 102/171 (59.65%), Query Frame = 1

Query: 15  ASAKKMPRAAAEEAED----MDDDILAWISVEEETVGELMMLLD----DAEKSRPMEEKV 74
           ++A KMPRA  E+  D    + DDI+AW+S++++T+ +LM LLD    +A+ +     +V
Sbjct: 21  SAALKMPRATLEDGGDGGGDLGDDIMAWLSMDDDTMSQLMNLLDTSSPNADSATARTTRV 80

Query: 75  KFIDDPYSSAVIFQSSSSYVTINGNEESCGSSFSESDSSMMASVDMNGARIKLMEIDSET 134
           KFID+PY S VIFQSSSSYVTINGNEESCGSSFS+S+SS+M SVD  G         S+ 
Sbjct: 81  KFIDNPYKSLVIFQSSSSYVTINGNEESCGSSFSDSESSVMVSVDTAGIVKSFPTRGSQR 140

Query: 135 VEKWKMWSED---------GLKEEEASAVLDGISW-DEDD--LARFIGDEE 166
             +   WS +         G  E     ++DG    D DD  L +F+  E+
Sbjct: 141 DCEVSAWSSNEEEKEVGGFGFFEGGGGEIMDGCDGSDLDDYVLPKFLVQEQ 191

BLAST of ClCG11G001750 vs. TAIR10
Match: AT5G56880.1 (AT5G56880.1 unknown protein)

HSP 1 Score: 90.1 bits (222), Expect = 1.4e-18
Identity = 54/135 (40.00%), Postives = 75/135 (55.56%), Query Frame = 1

Query: 42  EEETVGELMMLLDDAEKSRPMEE------------KVKFIDDPYSSAVIFQSSSSYVTIN 101
           +E T  E+M L++ +  +    E            +V+FIDDPY+  V+ QSSS Y+TIN
Sbjct: 33  DEYTPDEIMSLVESSSPTMTTTEIEGTNFSGEGSFRVRFIDDPYAMPVVVQSSSGYITIN 92

Query: 102 GNEESCGSSFSESDSSMMASVDMNGARIKLMEIDSETVEKWKMWSEDGLKEEEASAVLDG 161
            NEESCG SFS+SDSS+MASVD +G      E  +   EK   WS + ++  E       
Sbjct: 93  VNEESCGPSFSDSDSSVMASVDASGLFGCCFEYGN---EKGGAWSTNEVRASE------- 152

Query: 162 ISWDEDDLARFIGDE 165
             W++D LARF+G++
Sbjct: 153 YEWNDDMLARFLGED 157

BLAST of ClCG11G001750 vs. NCBI nr
Match: gi|659071351|ref|XP_008459356.1| (PREDICTED: uncharacterized protein LOC103498512 [Cucumis melo])

HSP 1 Score: 267.3 bits (682), Expect = 1.8e-68
Identity = 142/172 (82.56%), Postives = 150/172 (87.21%), Query Frame = 1

Query: 1   MEESLKSREFFPPEASAKKMPRAAAEEAEDMDDDILAWISVEEETVGELMMLLDDAEKSR 60
           MEES  + EF   EAS +K  R AA   EDMDDDILAWIS+EEETVGELMMLLDD EKSR
Sbjct: 1   MEESRNTHEFVRTEASTEKRQRPAA---EDMDDDILAWISLEEETVGELMMLLDDEEKSR 60

Query: 61  PMEEKVKFIDDPYSSAVIFQSSSSYVTINGNEESCGSSFSESDSSMMASVDMNGARIKLM 120
           P+EEKVKFI+DPYSSAVIFQSSSSYVTINGNEESCGSSFSESDSSMMASVDMNGARIK+M
Sbjct: 61  PVEEKVKFIEDPYSSAVIFQSSSSYVTINGNEESCGSSFSESDSSMMASVDMNGARIKVM 120

Query: 121 EIDSETVEKWKMWSEDGL----KEEEASAVLDG-ISWDEDDLARFIGDEELI 168
           EIDSETVEKWKMWSEDGL    +EEE S VLDG ISWDEDDLARF+GDEE I
Sbjct: 121 EIDSETVEKWKMWSEDGLMKEEEEEEVSGVLDGIISWDEDDLARFVGDEEQI 169

BLAST of ClCG11G001750 vs. NCBI nr
Match: gi|778665639|ref|XP_011648606.1| (PREDICTED: uncharacterized protein LOC105434536 [Cucumis sativus])

HSP 1 Score: 249.6 bits (636), Expect = 3.9e-63
Identity = 131/168 (77.98%), Postives = 144/168 (85.71%), Query Frame = 1

Query: 1   MEESLKSREFFPPEASAKKMPRAAAEEAEDMDDDILAWISVEEETVGELMMLLDDAEKSR 60
           MEES K+ +F   EAS +K         EDMDDDILAWIS+E+ETVGELMMLLDD EKSR
Sbjct: 1   MEESRKTHDFVRTEASTEK--------TEDMDDDILAWISLEDETVGELMMLLDDEEKSR 60

Query: 61  PMEEKVKFIDDPYSSAVIFQSSSSYVTINGNEESCGSSFSESDSSMMASVDMNGARIKLM 120
           P+EEKVKFI+DPYSSAV+FQSSSSYVTINGNEESCGSSFSESDSSMMASVDMNGARIK+M
Sbjct: 61  PVEEKVKFIEDPYSSAVVFQSSSSYVTINGNEESCGSSFSESDSSMMASVDMNGARIKVM 120

Query: 121 EIDSETVEKWKMWSEDGL--KEEEASAVLDGI-SWDEDDLARFIGDEE 166
           EID ETV+KWKMWSE+ L  +EEE S V +GI SWDEDDLARFIGDEE
Sbjct: 121 EIDCETVDKWKMWSEERLMKEEEEVSGVSEGIMSWDEDDLARFIGDEE 160

BLAST of ClCG11G001750 vs. NCBI nr
Match: gi|731406536|ref|XP_010656195.1| (PREDICTED: uncharacterized protein LOC104880632 [Vitis vinifera])

HSP 1 Score: 132.5 bits (332), Expect = 6.9e-28
Identity = 80/167 (47.90%), Postives = 111/167 (66.47%), Query Frame = 1

Query: 14  EASAK---KMPRAAA----EEAEDMDDDILAWISVEEETVGELMMLLDDAEKSRPMEEKV 73
           +AS K    M RA+A    E   D DDDI+AW+S++E++V ELM LL+  E + P+  KV
Sbjct: 11  DASGKVSGNMARASAPSEGEGEGDSDDDIMAWLSIDEDSVVELMELLEP-EVTSPI--KV 70

Query: 74  KFIDDPYSSAVIFQSSSSYVTINGNEESCGSSFSESDSSMMASVDMNGARIKLM-----E 133
           KFID+PY S +IFQSS+SYVTINGNEESCGSSFS+S++S+MAS+DM G R+  +     E
Sbjct: 71  KFIDNPYVSTLIFQSSASYVTINGNEESCGSSFSDSEASIMASIDMGGVRVHPVSGWAGE 130

Query: 134 IDSETVEKWKM----WSEDGLKEEEASAVLDGISWDEDDLARFIGDE 165
             + +   W +    W+E+G    +     DG  WD+D LARF+G++
Sbjct: 131 FPAASGGGWGLGESAWAENG----DGFNGWDGFEWDDDLLARFLGED 170

BLAST of ClCG11G001750 vs. NCBI nr
Match: gi|823129195|ref|XP_012446777.1| (PREDICTED: uncharacterized protein LOC105770223 [Gossypium raimondii])

HSP 1 Score: 123.6 bits (309), Expect = 3.2e-25
Identity = 80/185 (43.24%), Postives = 106/185 (57.30%), Query Frame = 1

Query: 1   MEESLKSREFFPPEASAKKMPRAAAEEAE-DMDDDILAWISVE----EETVGELMMLLDD 60
           ME+   + E    E+ A K  R A E  E +  DD+L W+S+E     + + EL  L+DD
Sbjct: 1   MEKKRATEEDTGDESPATKRRREAPETVEFNGYDDVLPWLSMEGTCKTDAMSELFKLVDD 60

Query: 61  AEKSRPMEE--------KVKFIDDPYSSAVIFQSSSSYVTINGNEESCGSSFSESDSSMM 120
           + +  P           KVKF D+PYSSA+IFQSSSSYVTINGNEESCGSSFS+S+SS+M
Sbjct: 61  STELAPSSTCSPTSYCTKVKFSDNPYSSALIFQSSSSYVTINGNEESCGSSFSDSESSVM 120

Query: 121 ASVDMNGARIKLMEIDS--ETVEKW------KMWSEDGLKEEEASAVLDGISWDEDDLAR 165
           ASVDM G     ++ D+  E +  W        W +   +  E   V     WDE+ LAR
Sbjct: 121 ASVDMRGIVSTNVKFDNGLEEIRGWLEAEEGSAWGKSEGESRETWTV--DWEWDEEQLAR 180

BLAST of ClCG11G001750 vs. NCBI nr
Match: gi|567918930|ref|XP_006451471.1| (hypothetical protein CICLE_v10010560mg [Citrus clementina])

HSP 1 Score: 120.6 bits (301), Expect = 2.7e-24
Identity = 75/171 (43.86%), Postives = 103/171 (60.23%), Query Frame = 1

Query: 15  ASAKKMPRAAAEEAED----MDDDILAWISVEEETVGELMMLLD----DAEKSRPMEEKV 74
           ++A KMPRA  E+  D    + DDI+AW+S++++T+ +LM LLD    +A+ +     +V
Sbjct: 21  SAALKMPRATLEDGGDGGGDLGDDIMAWLSMDDDTMSQLMNLLDTSPPNADSATARTTRV 80

Query: 75  KFIDDPYSSAVIFQSSSSYVTINGNEESCGSSFSESDSSMMASVDMNGARIKLMEIDSET 134
           KFID+PY S VIFQSSSSYVTINGNEESCGSSFS+S+SS+M SVD  G         S+ 
Sbjct: 81  KFIDNPYKSLVIFQSSSSYVTINGNEESCGSSFSDSESSVMVSVDTAGIVKSFPTRGSQR 140

Query: 135 VEKWKMWSED---------GLKEEEASAVLDGISW-DEDD--LARFIGDEE 166
             +   WS +         G  E E   ++DG    D DD  L +F+  E+
Sbjct: 141 DCEVSAWSSNEEEKEVGGFGFFEGEGGEIMDGCDGSDLDDYVLPKFLVQEQ 191

The following BLAST results are available for this feature:
Match NameE-valueIdentityDescription
A0A0A0LIN0_CUCSA2.7e-6377.98Uncharacterized protein OS=Cucumis sativus GN=Csa_2G000450 PE=4 SV=1[more]
A0A0D2LT56_GOSRA2.2e-2543.24Uncharacterized protein OS=Gossypium raimondii GN=B456_001G011900 PE=4 SV=1[more]
V4UQI5_9ROSI1.9e-2443.86Uncharacterized protein OS=Citrus clementina GN=CICLE_v10010560mg PE=4 SV=1[more]
A0A061GTJ0_THECC3.2e-2445.00Uncharacterized protein OS=Theobroma cacao GN=TCM_037661 PE=4 SV=1[more]
A0A067F2T1_CITSI1.2e-2343.27Uncharacterized protein OS=Citrus sinensis GN=CISIN_1g029127mg PE=4 SV=1[more]
Match NameE-valueIdentityDescription
AT5G56880.11.4e-1840.00 unknown protein[more]
Match NameE-valueIdentityDescription
gi|659071351|ref|XP_008459356.1|1.8e-6882.56PREDICTED: uncharacterized protein LOC103498512 [Cucumis melo][more]
gi|778665639|ref|XP_011648606.1|3.9e-6377.98PREDICTED: uncharacterized protein LOC105434536 [Cucumis sativus][more]
gi|731406536|ref|XP_010656195.1|6.9e-2847.90PREDICTED: uncharacterized protein LOC104880632 [Vitis vinifera][more]
gi|823129195|ref|XP_012446777.1|3.2e-2543.24PREDICTED: uncharacterized protein LOC105770223 [Gossypium raimondii][more]
gi|567918930|ref|XP_006451471.1|2.7e-2443.86hypothetical protein CICLE_v10010560mg [Citrus clementina][more]
GO Assignments
This gene is annotated with the following GO terms.
Category Term Accession Term Name
biological_process GO:0008150 biological_process
cellular_component GO:0005575 cellular_component
molecular_function GO:0003674 molecular_function

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
ClCG11G001750.1ClCG11G001750.1mRNA


The following gene(s) are paralogous to this gene:

None