CsGy1G032930 (gene) Cucumber (Gy14) v2 | Cucurbit Genomics Database (CuGenDB)

Overview


Name	CsGy1G032930
Type	gene
Organism	Cucumis sativus (Cucumber (Gy14) v2)
Description	Pentatricopeptide repeat-containing protein At4g19890
Location	Chr1 : 32608195 .. 32610751 (+)

Genome Viewer

Gene Expression

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: five_prime_UTRexonCDS

Hold the cursor over a type above to highlight its positions in the sequence below.

AACAAATCTAACGTCAAAGTTTCTCATACTTTTATTTTTATATATTTGATGAACTCAACAAATCCTCGACAATTAGCATTGAATGGAGGGAGAGGTCCTGCAGTTTTTATACCTTTGATGCAGTTCTTGGCGTCTCTCCGAATTCTGAGGCCCCATGGATTTCTCCAGAAATTATGTTCCTTTCAACAGGGATCTTCAGCTTCTGCCTCCCTCGCATTTTTCTCCTCAACTCATTTTGATTCCATCTCTTCGCCGCACCATGATTTTTCTTCTTCTTCTTCGTTGCAGTCCCCTCTGAAAAAGATTTGTTCATTAGTTCTCGACACTTATTTACGTCAACCCCATCTGAGATTCTCTCCATCTAAGCTGAATCTTGATATGGATGCTGCCTCTTTGACTCATGAGCAAGCCATTTCTGCCGTTGCTTTGCTTGCTAGCGAGGAGGGTTCAATGGTCGCGCTGAGTTTCTTTTACTGGGCAGTTGGGTTCCCCAAATTCCGGTATTTCATGCGGCTCTACATAGTTTGTACGATGTCATTGGTTGGCAAATGTAATCTAGAGCGAGCTCATGAAGTTGTGGAGTGTATGGTAGGTGTTTTTGCAGAAATTGGGAAGTTGAAGGAGGCGGTGGATATGATCCTTGACATGAGAAATCAGGGACTTGTGTTGACCACCAGGGTAATGAATCGTATTATCCTGGTGGCTGCTGAAATGAGGCTGGTTGAATATGCAGGCAATGTGTTCGACGAAATGTCTGCAAGAGGTGTGTATCCTGATTCTTGCACTTATAAGTATATAATTGTAGGTTACTGTAGAAATGGTAATGTTTTGGAAGCAGATAGGTGGATATGTGAGATGATGGAGAGAGGTTTTGTGGTTGATAATGCCACACTGACTTTGATTATTACAGCATTTTGTGAAAAAAGTTTAGTAAACAGGGCAGTTTGGTTTTTCCATAAGGTTACTAAGATGGGTTTATCACCAAATTTGATAAACTATTCATCTATGATTAGTGGGTTGTGCAAGAGGGGTAGTGTTAAGCAAGCATTTGAGTTATTGGAAGAGATGGTTAAAAATGGATGGAAACCCAATGTGTATACCCACACATCATTAATTCATGGCCTTTGCAAGAAGGGATGGACAGAGAGAGCTTTTAGACTGTTTCTTAAACTTATTAGAAGTGATAATTACAAGCCAAATGTGCACACTTACACAGCCATGATAAGTGGGTACTGCAAAGAGGAGAAGTTGAGTAGAGCTGAAATGTTGTTTGAAAGAATGAAAGAACAGGGACTGGTTCCAAACACCAACACTTATACAACACTTATTGATGGGCACTGTAAGGCTGGGAATTTCAGTAAAGCGTATGAATTGATGGAGTTGATGTCTAATGAAGGTTTCTTCCCTAATACATGTACCTACAATTCAATTGTTGATGGTCTCTGCAAAAGAGGGAGAGCTGAAGAGGCTTTCAAGCTGCTAAATACAGGATTTCAAAATCAAATTGAAGCTGACGGTGTCACATACACCATTCTGATATCTGAGCAGTGTAAGCGAGCCGATATGAACCAAGCCCTTGTGTTTTTAAATAAGATGTTTAAAGTTGGTTTCCAGCCTGACATTCATTTATATACCACTTTGATTGCTGCATTCTGCAGGCAAAATATGATGAAGGATAGTGAAAAGTTGTTTGATGAAGTTATTAAGCTTGGGTTGGCTCCAACAAAGGAAACTTACACATCCATGATATGTGGCTATTGTAGGGAGAAAAAGGTTAGCTTAGCAGTCAAGTTTTTCCAGAAGATGAGTGACCATGGTTGTGCACCAGATAGCATTAGTTATGGTGCTTTAATCAGTGGCCTTTGTAAAGAGTCGAGGCTGGATGAGGCTCGCCAATTATATGATACCATGATAGACAAAGGGCTGTCTCCTTGCGAAGTTACACGGGTGACATTGACTTATGAGTATTGCAAAACAGAAGACTTTGCTTCGGCCATGGTTATATTGGAACGGCTGAACAAGAAGCTTTGGATACGCACAGTTCATACGCTAATAAGGAAGCTTTGTTGCGAGAAAAAAGTCGCCTTGGCAGCTCTGTTCTTTCATAAGTTACTGGATAAGGAGGTCAATGTCGACCGTGTGACTTTGGCTGCATTCAACACTGCCTGTATTGAAAGCAATAAGTATGCTCTTGTTTCGGACTTATCCGAGAGGATTTCAAAAGGTATCGGCTAACCTTCTAAATACTGGAATGATAAATGAATTTATCGTGTTGAAGAGAAGAGCAATGGAGGATAATGATCAAAGATAGATTTAGTTCTCTTGATTTGATTCCAAGCCAGCTGCATCTCAGGGATGTCTTCTAAGATGATAAAGCTTGGCCTGCACTTCAAGAACAGTGCAGGTAATTCAAGTTTTGATTCATAATCTCTCTTTCTTTAAGGAATATATAATCTCTTTTGTTATTGTTGTTATTACTATTTATCTATTTATTGTTTTATAAGAAGAAATATTGAAATTATATGAAGAATTATTTGCTGTTACAGCCACACATTGA

mRNA sequence

AACAAATCTAACGTCAAAGTTTCTCATACTTTTATTTTTATATATTTGATGAACTCAACAAATCCTCGACAATTAGCATTGAATGGAGGGAGAGGTCCTGCAGTTTTTATACCTTTGATGCAGTTCTTGGCGTCTCTCCGAATTCTGAGGCCCCATGGATTTCTCCAGAAATTATGTTCCTTTCAACAGGGATCTTCAGCTTCTGCCTCCCTCGCATTTTTCTCCTCAACTCATTTTGATTCCATCTCTTCGCCGCACCATGATTTTTCTTCTTCTTCTTCGTTGCAGTCCCCTCTGAAAAAGATTTGTTCATTAGTTCTCGACACTTATTTACGTCAACCCCATCTGAGATTCTCTCCATCTAAGCTGAATCTTGATATGGATGCTGCCTCTTTGACTCATGAGCAAGCCATTTCTGCCGTTGCTTTGCTTGCTAGCGAGGAGGGTTCAATGGTCGCGCTGAGTTTCTTTTACTGGGCAGTTGGGTTCCCCAAATTCCGGTATTTCATGCGGCTCTACATAGTTTGTACGATGTCATTGGTTGGCAAATGTAATCTAGAGCGAGCTCATGAAGTTGTGGAGTGTATGGTAGGTGTTTTTGCAGAAATTGGGAAGTTGAAGGAGGCGGTGGATATGATCCTTGACATGAGAAATCAGGGACTTGTGTTGACCACCAGGGTAATGAATCGTATTATCCTGGTGGCTGCTGAAATGAGGCTGGTTGAATATGCAGGCAATGTGTTCGACGAAATGTCTGCAAGAGGTGTGTATCCTGATTCTTGCACTTATAAGTATATAATTGTAGGTTACTGTAGAAATGGTAATGTTTTGGAAGCAGATAGGTGGATATGTGAGATGATGGAGAGAGGTTTTGTGGTTGATAATGCCACACTGACTTTGATTATTACAGCATTTTGTGAAAAAAGTTTAGTAAACAGGGCAGTTTGGTTTTTCCATAAGGTTACTAAGATGGGTTTATCACCAAATTTGATAAACTATTCATCTATGATTAGTGGGTTGTGCAAGAGGGGTAGTGTTAAGCAAGCATTTGAGTTATTGGAAGAGATGGTTAAAAATGGATGGAAACCCAATGTGTATACCCACACATCATTAATTCATGGCCTTTGCAAGAAGGGATGGACAGAGAGAGCTTTTAGACTGTTTCTTAAACTTATTAGAAGTGATAATTACAAGCCAAATGTGCACACTTACACAGCCATGATAAGTGGGTACTGCAAAGAGGAGAAGTTGAGTAGAGCTGAAATGTTGTTTGAAAGAATGAAAGAACAGGGACTGGTTCCAAACACCAACACTTATACAACACTTATTGATGGGCACTGTAAGGCTGGGAATTTCAGTAAAGCGTATGAATTGATGGAGTTGATGTCTAATGAAGGTTTCTTCCCTAATACATGTACCTACAATTCAATTGTTGATGGTCTCTGCAAAAGAGGGAGAGCTGAAGAGGCTTTCAAGCTGCTAAATACAGGATTTCAAAATCAAATTGAAGCTGACGGTGTCACATACACCATTCTGATATCTGAGCAGCAAAATATGATGAAGGATAGTGAAAAGTTGTTTGATGAAGTTATTAAGCTTGGGTTGGCTCCAACAAAGGAAACTTACACATCCATGATATGTGGCTATTGTAGGGAGAAAAAGGTTAGCTTAGCAGTCAAGTTTTTCCAGAAGATGAGTGACCATGGTTGTGCACCAGATAGCATTAGTTATGGTGCTTTAATCAGTGGCCTTTGTAAAGAGTCGAGGCTGGATGAGGCTCGCCAATTATATGATACCATGATAGACAAAGGGCTGTCTCCTTGCGAAGTTACACGGGTGACATTGACTTATGAGTATTGCAAAACAGAAGACTTTGCTTCGGCCATGGTTATATTGGAACGGCTGAACAAGAAGCTTTGGATACGCACAGTTCATACGCTAATAAGGAAGCTTTGTTGCGAGAAAAAAGTCGCCTTGGCAGCTCTGTTCTTTCATAAGTTACTGGATAAGGAGGTCAATGTCGACCGTGTGACTTTGGCTGCATTCAACACTGCCTGTATTGAAAGCAATAAGTATGCTCTTGTTTCGGACTTATCCGAGAGGATTTCAAAAGCCAGCTGCATCTCAGGGATGTCTTCTAAGATGATAAAGCTTGGCCTGCACTTCAAGAACAGTGCAGAAATATTGAAATTATATGAAGAATTATTTGCTGTTACAGCCACACATTGA

Coding sequence (CDS)

ATGAACTCAACAAATCCTCGACAATTAGCATTGAATGGAGGGAGAGGTCCTGCAGTTTTTATACCTTTGATGCAGTTCTTGGCGTCTCTCCGAATTCTGAGGCCCCATGGATTTCTCCAGAAATTATGTTCCTTTCAACAGGGATCTTCAGCTTCTGCCTCCCTCGCATTTTTCTCCTCAACTCATTTTGATTCCATCTCTTCGCCGCACCATGATTTTTCTTCTTCTTCTTCGTTGCAGTCCCCTCTGAAAAAGATTTGTTCATTAGTTCTCGACACTTATTTACGTCAACCCCATCTGAGATTCTCTCCATCTAAGCTGAATCTTGATATGGATGCTGCCTCTTTGACTCATGAGCAAGCCATTTCTGCCGTTGCTTTGCTTGCTAGCGAGGAGGGTTCAATGGTCGCGCTGAGTTTCTTTTACTGGGCAGTTGGGTTCCCCAAATTCCGGTATTTCATGCGGCTCTACATAGTTTGTACGATGTCATTGGTTGGCAAATGTAATCTAGAGCGAGCTCATGAAGTTGTGGAGTGTATGGTAGGTGTTTTTGCAGAAATTGGGAAGTTGAAGGAGGCGGTGGATATGATCCTTGACATGAGAAATCAGGGACTTGTGTTGACCACCAGGGTAATGAATCGTATTATCCTGGTGGCTGCTGAAATGAGGCTGGTTGAATATGCAGGCAATGTGTTCGACGAAATGTCTGCAAGAGGTGTGTATCCTGATTCTTGCACTTATAAGTATATAATTGTAGGTTACTGTAGAAATGGTAATGTTTTGGAAGCAGATAGGTGGATATGTGAGATGATGGAGAGAGGTTTTGTGGTTGATAATGCCACACTGACTTTGATTATTACAGCATTTTGTGAAAAAAGTTTAGTAAACAGGGCAGTTTGGTTTTTCCATAAGGTTACTAAGATGGGTTTATCACCAAATTTGATAAACTATTCATCTATGATTAGTGGGTTGTGCAAGAGGGGTAGTGTTAAGCAAGCATTTGAGTTATTGGAAGAGATGGTTAAAAATGGATGGAAACCCAATGTGTATACCCACACATCATTAATTCATGGCCTTTGCAAGAAGGGATGGACAGAGAGAGCTTTTAGACTGTTTCTTAAACTTATTAGAAGTGATAATTACAAGCCAAATGTGCACACTTACACAGCCATGATAAGTGGGTACTGCAAAGAGGAGAAGTTGAGTAGAGCTGAAATGTTGTTTGAAAGAATGAAAGAACAGGGACTGGTTCCAAACACCAACACTTATACAACACTTATTGATGGGCACTGTAAGGCTGGGAATTTCAGTAAAGCGTATGAATTGATGGAGTTGATGTCTAATGAAGGTTTCTTCCCTAATACATGTACCTACAATTCAATTGTTGATGGTCTCTGCAAAAGAGGGAGAGCTGAAGAGGCTTTCAAGCTGCTAAATACAGGATTTCAAAATCAAATTGAAGCTGACGGTGTCACATACACCATTCTGATATCTGAGCAGCAAAATATGATGAAGGATAGTGAAAAGTTGTTTGATGAAGTTATTAAGCTTGGGTTGGCTCCAACAAAGGAAACTTACACATCCATGATATGTGGCTATTGTAGGGAGAAAAAGGTTAGCTTAGCAGTCAAGTTTTTCCAGAAGATGAGTGACCATGGTTGTGCACCAGATAGCATTAGTTATGGTGCTTTAATCAGTGGCCTTTGTAAAGAGTCGAGGCTGGATGAGGCTCGCCAATTATATGATACCATGATAGACAAAGGGCTGTCTCCTTGCGAAGTTACACGGGTGACATTGACTTATGAGTATTGCAAAACAGAAGACTTTGCTTCGGCCATGGTTATATTGGAACGGCTGAACAAGAAGCTTTGGATACGCACAGTTCATACGCTAATAAGGAAGCTTTGTTGCGAGAAAAAAGTCGCCTTGGCAGCTCTGTTCTTTCATAAGTTACTGGATAAGGAGGTCAATGTCGACCGTGTGACTTTGGCTGCATTCAACACTGCCTGTATTGAAAGCAATAAGTATGCTCTTGTTTCGGACTTATCCGAGAGGATTTCAAAAGCCAGCTGCATCTCAGGGATGTCTTCTAAGATGATAAAGCTTGGCCTGCACTTCAAGAACAGTGCAGAAATATTGAAATTATATGAAGAATTATTTGCTGTTACAGCCACACATTGA

Protein sequence

MNSTNPRQLALNGGRGPAVFIPLMQFLASLRILRPHGFLQKLCSFQQGSSASASLAFFSSTHFDSISSPHHDFSSSSSLQSPLKKICSLVLDTYLRQPHLRFSPSKLNLDMDAASLTHEQAISAVALLASEEGSMVALSFFYWAVGFPKFRYFMRLYIVCTMSLVGKCNLERAHEVVECMVGVFAEIGKLKEAVDMILDMRNQGLVLTTRVMNRIILVAAEMRLVEYAGNVFDEMSARGVYPDSCTYKYIIVGYCRNGNVLEADRWICEMMERGFVVDNATLTLIITAFCEKSLVNRAVWFFHKVTKMGLSPNLINYSSMISGLCKRGSVKQAFELLEEMVKNGWKPNVYTHTSLIHGLCKKGWTERAFRLFLKLIRSDNYKPNVHTYTAMISGYCKEEKLSRAEMLFERMKEQGLVPNTNTYTTLIDGHCKAGNFSKAYELMELMSNEGFFPNTCTYNSIVDGLCKRGRAEEAFKLLNTGFQNQIEADGVTYTILISEQQNMMKDSEKLFDEVIKLGLAPTKETYTSMICGYCREKKVSLAVKFFQKMSDHGCAPDSISYGALISGLCKESRLDEARQLYDTMIDKGLSPCEVTRVTLTYEYCKTEDFASAMVILERLNKKLWIRTVHTLIRKLCCEKKVALAALFFHKLLDKEVNVDRVTLAAFNTACIESNKYALVSDLSERISKASCISGMSSKMIKLGLHFKNSAEILKLYEELFAVTATH

Homology

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BLAST of CsGy1G032930 vs. NCBI nr
Match: KGN66873.1 (hypothetical protein Csa_1G701980 [Cucumis sativus])

HSP 1 Score: 520.0 bits (1338), Expect = 1.3e-143
Identity = 628/725 (86.62%), Postives = 628/725 (86.62%), Query Frame = 0


Query: 1   MNSTNPRQLALNGGRGPAVFIPLMQFLASLRILRPHGFLQKLCSFQQGSSASASLAFFSS 60
           MNSTNPRQLALNGGRGPAVFIPLMQFLASLRILRPHGFLQKLCSFQQGSSASASLAFFSS
Sbjct: 1   MNSTNPRQLALNGGRGPAVFIPLMQFLASLRILRPHGFLQKLCSFQQGSSASASLAFFSS 60

Query: 61  THFDSISSPHHDFSSSSSLQSPLKKICSLVLDTYLRQPHLRFSPSKLNLDMDAASLTHEQ 120
           THFDSISSPHHDFSSSSSLQSPLKKICSLVLDTYLRQPHLRFSPSKLNLDMDAASLTHEQ
Sbjct: 61  THFDSISSPHHDFSSSSSLQSPLKKICSLVLDTYLRQPHLRFSPSKLNLDMDAASLTHEQ 120

Query: 121 AISAVALLASEEGSMVALSFFYWAVGFPKFRYFMRLYIVCTMSLVGKCNLERAHEVVECM 180
           AISAVALLASEEGSMVALSFFYWAVGFPKFRYFMRLYIVCTMSLVGKCNLERAHEVVECM
Sbjct: 121 AISAVALLASEEGSMVALSFFYWAVGFPKFRYFMRLYIVCTMSLVGKCNLERAHEVVECM 180

Query: 181 VGVFAEIGKLKEAVDMILDMRNQGLVLTTRVMNRIILVAAEMRLVEYAGNVFDEMSARGV 240
           VGVFAEIGKLKEAVDMILDMRNQGLVLTTRVMNRIILVAAEMRLVEYAGNVFDEMSARGV
Sbjct: 181 VGVFAEIGKLKEAVDMILDMRNQGLVLTTRVMNRIILVAAEMRLVEYAGNVFDEMSARGV 240

Query: 241 YPDSCTYKYIIVGYCRNGNVLEXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX 300
           YPDSCTYKYIIVGYCRNGNVLEXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX
Sbjct: 241 YPDSCTYKYIIVGYCRNGNVLEXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX 300

Query: 301 XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX 360
           XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX
Sbjct: 301 XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX 360

Query: 361 XXXXXXXXXXXXXXXXXSDXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXKEQ------ 420
           XXXXXXXXXXXXXXXXXSDXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXKEQ      
Sbjct: 361 XXXXXXXXXXXXXXXXXSDXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXKEQXXXXXX 420

Query: 421 -------------------------------XXXXXXXXXXXXXXXXXXXXXXXXXXXXX 480
                                          XXXXXXXXXXXXXXXXXXXXXXXXXXXXX
Sbjct: 421 XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX 480

Query: 481 XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXFQNQIEADGVTYTILISEQQNM 540
           XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX                      
Sbjct: 481 XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX 540

Query: 541 MKDSEKLFDEVIKLGLAPTKETYTSMICGYCREKKVSLXXXXXXXXXXXXXXXXXXXXXX 600
                                                 XXXXXXXXXXXXXXXXXXXXXX
Sbjct: 541 XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX 600

Query: 601 XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXASAMVILERLNKKL 660
           XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXASAMVILERLNKKL
Sbjct: 601 XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXASAMVILERLNKKL 660

Query: 661 WIRTVHTLIRKLCCEKKVALAALFFHKLLDKEVNVDRVTLAAFNTACIESNKYALVSDLS 689
           WIRTVHTLIRKLCCEKKVALAALFFHKLLDKEVNVDRVTLAAFNTACIESNKYALVSDLS
Sbjct: 661 WIRTVHTLIRKLCCEKKVALAALFFHKLLDKEVNVDRVTLAAFNTACIESNKYALVSDLS 720

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BLAST of CsGy1G032930 vs. NCBI nr
Match: XP_004145475.2 (PREDICTED: pentatricopeptide repeat-containing protein At4g19890 [Cucumis sativus])

HSP 1 Score: 473.0 bits (1216), Expect = 1.8e-129
Identity = 605/702 (86.18%), Postives = 605/702 (86.18%), Query Frame = 0


Query: 24  MQFLASLRILRPHGFLQKLCSFQQGSSASASLAFFSSTHFDSISSPHHDFSSSSSLQSPL 83
           MQFLASLRILRPHGFLQKLCSFQQGSSASASLAFFSSTHFDSISSPHHDFSSSSSLQSPL
Sbjct: 1   MQFLASLRILRPHGFLQKLCSFQQGSSASASLAFFSSTHFDSISSPHHDFSSSSSLQSPL 60

Query: 84  KKICSLVLDTYLRQPHLRFSPSKLNLDMDAASLTHEQAISAVALLASEEGSMVALSFFYW 143
           KKICSLVLDTYLRQPHLRFSPSKLNLDMDAASLTHEQAISAVALLASEEGSMVALSFFYW
Sbjct: 61  KKICSLVLDTYLRQPHLRFSPSKLNLDMDAASLTHEQAISAVALLASEEGSMVALSFFYW 120

Query: 144 AVGFPKFRYFMRLYIVCTMSLVGKCNLERAHEVVECMVGVFAEIGKLKEAVDMILDMRNQ 203
           AVGFPKFRYFMRLYIVCTMSLVGKCNLERAHEVVECMVGVFAEIGKLKEAVDMILDMRNQ
Sbjct: 121 AVGFPKFRYFMRLYIVCTMSLVGKCNLERAHEVVECMVGVFAEIGKLKEAVDMILDMRNQ 180

Query: 204 GLVLTTRVMNRIILVAAEMRLVEYAGNVFDEMSARGVYPDSCTYKYIIVGYCRNGNVLEX 263
           GLVLTTRVMNRIILVAAEMRLVEYAGNVFDEMSARGVYPDSCTYKYIIVGYCRNGNVLEX
Sbjct: 181 GLVLTTRVMNRIILVAAEMRLVEYAGNVFDEMSARGVYPDSCTYKYIIVGYCRNGNVLEX 240

Query: 264 XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX 323
           XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX
Sbjct: 241 XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX 300

Query: 324 XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXSDXXXX 383
           XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXSDXXXX
Sbjct: 301 XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXSDXXXX 360

Query: 384 XXXXXXXXXXXXXXXXXXXXXXXXXXXXKEQ----------------------------- 443
           XXXXXXXXXXXXXXXXXXXXXXXXXXXXKEQ                             
Sbjct: 361 XXXXXXXXXXXXXXXXXXXXXXXXXXXXKEQXXXXXXXXXXXXXXXXXXXXXXXXXXXXX 420

Query: 444 --------XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX 503
                   XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX
Sbjct: 421 XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX 480

Query: 504 XXXXXXXXXXXXXXXFQNQIEADGVTYTILISEQQNMMKDSEKLFDEVIKLGLAPTKETY 563
           XXXXXXXXXXXXXXX                                             
Sbjct: 481 XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX 540

Query: 564 TSMICGYCREKKVSLXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX 623
                          XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX
Sbjct: 541 XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX 600

Query: 624 XXXXXXXXXXXXXXXXXXXXXXXASAMVILERLNKKLWIRTVHTLIRKLCCEKKVALAAL 683
           XXXXXXXXXXXXXXXXXXXXXXXASAMVILERLNKKLWIRTVHTLIRKLCCEKKVALAAL
Sbjct: 601 XXXXXXXXXXXXXXXXXXXXXXXASAMVILERLNKKLWIRTVHTLIRKLCCEKKVALAAL 660

Query: 684 FFHKLLDKEVNVDRVTLAAFNTACIESNKYALVSDLSERISK 689
           FFHKLLDKEVNVDRVTLAAFNTACIESNKYALVSDLSERISK
Sbjct: 661 FFHKLLDKEVNVDRVTLAAFNTACIESNKYALVSDLSERISK 702

[Close]

BLAST of CsGy1G032930 vs. NCBI nr
Match: XP_008459042.1 (PREDICTED: pentatricopeptide repeat-containing protein At4g19890 [Cucumis melo])

HSP 1 Score: 339.7 bits (870), Expect = 2.4e-89
Identity = 178/194 (91.75%), Postives = 184/194 (94.85%), Query Frame = 0


Query: 24  MQFLASLRILRPHGFLQKLCSFQQGSSASASLAFFSSTHFDSISSPHHDFSSSSSLQSPL 83
           MQFLAS RILR HGFLQKLCS Q GSS SAS+AFFSSTHFDSISSPHHDF SSSSLQSP+
Sbjct: 1   MQFLASHRILRTHGFLQKLCSLQHGSSVSASIAFFSSTHFDSISSPHHDF-SSSSLQSPV 60

Query: 84  KKICSLVLDTYLRQPHLRFSPSKLNLDMDAASLTHEQAISAVALLASEEGSMVALSFFYW 143
           +K CSLVL+ YLRQPHLRFSPSKLNLDMDA SLTHEQAISAVA LASEEGSMVALSFFYW
Sbjct: 61  QKTCSLVLEAYLRQPHLRFSPSKLNLDMDADSLTHEQAISAVASLASEEGSMVALSFFYW 120

Query: 144 AVGFPKFRYFMRLYIVCTMSLVGKCNLERAHEVVECMVGVFAEIGKLKEAVDMILDMRNQ 203
           A+GFPKFRYFMRLYIVCTMSL+GKCNLERAHEVVECMVGVFAEIGKLKEAVDMILDMRNQ
Sbjct: 121 AIGFPKFRYFMRLYIVCTMSLIGKCNLERAHEVVECMVGVFAEIGKLKEAVDMILDMRNQ 180

Query: 204 GLVLTTRVMNRIIL 218
           GLVLTTRVMNRIIL
Sbjct: 181 GLVLTTRVMNRIIL 193

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BLAST of CsGy1G032930 vs. NCBI nr
Match: XP_023541359.1 (pentatricopeptide repeat-containing protein At4g19890 [Cucurbita pepo subsp. pepo])

HSP 1 Score: 283.1 bits (723), Expect = 2.7e-72
Identity = 153/193 (79.27%), Postives = 164/193 (84.97%), Query Frame = 0


Query: 21  IPLMQFLASLRILRPHGFLQKLCSFQQGSSASASLAFFSSTHFDSISSPHHD---FSSSS 80
           +P MQFLASLRILR HGFL K  SF Q  S SAS   FSS+HFDSISSPH D    SS S
Sbjct: 1   MPSMQFLASLRILRLHGFLHKF-SFPQRLSVSASAGLFSSSHFDSISSPHRDSSXXSSCS 60

Query: 81  SLQSPLKKICSLVLDTYLRQPHLRFSPSKLNLDMDAASLTHEQAISAVALLASEEGSMVA 140
           SLQSP++ ICSLV+++Y RQPHLRFSP KLNLDMDA  LTHEQAIS VA LASEEGSM+A
Sbjct: 61  SLQSPVQTICSLVIESYFRQPHLRFSPLKLNLDMDADFLTHEQAISVVASLASEEGSMMA 120

Query: 141 LSFFYWAVGFPKFRYFMRLYIVCTMSLVGKCNLERAHEVVECMVGVFAEIGKLKEAVDMI 200
           LSFFYWA+GFPKFRYFMRLYIVCTM LVGKC  ERA EVVECM+GVFAEIGKLKEAVDMI
Sbjct: 121 LSFFYWAIGFPKFRYFMRLYIVCTMLLVGKCKQERADEVVECMIGVFAEIGKLKEAVDMI 180

Query: 201 LDMRNQGLVLTTR 211
           +DMRNQGLVLTTR
Sbjct: 181 IDMRNQGLVLTTR 192

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BLAST of CsGy1G032930 vs. NCBI nr
Match: XP_022994748.1 (pentatricopeptide repeat-containing protein At4g19890 [Cucurbita maxima])

HSP 1 Score: 280.8 bits (717), Expect = 1.3e-71
Identity = 152/190 (80.00%), Postives = 164/190 (86.32%), Query Frame = 0


Query: 21  IPLMQFLASLRILRPHGFLQKLCSFQQGSSASASLAFFSSTHFDSISSPHHDFSSSSSLQ 80
           +P MQFLASLRILR HGFL K  SF Q  S SAS  FFSS+HFDSISSPH D SSSSSLQ
Sbjct: 1   MPSMQFLASLRILRLHGFLHKF-SFPQRLSVSASAGFFSSSHFDSISSPHRD-SSSSSLQ 60

Query: 81  SPLKKICSLVLDTYLRQPHLRFSPSKLNLDMDAASLTHEQAISAVALLASEEGSMVALSF 140
           SP++ ICSLV+++Y RQPHLRFSP KLNLD+DA  LTHEQAIS VA LASEEGSM+ALSF
Sbjct: 61  SPVQTICSLVIESYFRQPHLRFSPFKLNLDVDADFLTHEQAISVVASLASEEGSMMALSF 120

Query: 141 FYWAVGFPKFRYFMRLYIVCTMSLVGKCNLERAHEVVECMVGVFAEIGKLKEAVDMILDM 200
           FYWA+ FPKFRYFMRLYIVCTM LV KC  ERA EVVECM+GVFAEIGKLKEAVDMI+DM
Sbjct: 121 FYWAIRFPKFRYFMRLYIVCTMLLVEKCKQERADEVVECMIGVFAEIGKLKEAVDMIIDM 180

Query: 201 RNQGLVLTTR 211
           RNQGLVLTTR
Sbjct: 181 RNQGLVLTTR 188

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BLAST of CsGy1G032930 vs. TAIR10
Match: AT4G19890.1 (Pentatricopeptide repeat (PPR-like) superfamily protein)

HSP 1 Score: 150.2 bits (378), Expect = 4.9e-36
Identity = 89/152 (58.55%), Postives = 109/152 (71.71%), Query Frame = 0


Query: 54  SLAFF---SSTHFDS-ISSPHHDFSSSSSLQSPLKKICSLVLDTYLRQPHLRFSPSKLNL 113
           SL FF   SS H  S +S P     SSS  Q  +K +CSLV  +YLRQ H+  SP ++NL
Sbjct: 25  SLFFFRLISSDHESSDLSLP--SSPSSSPSQCLVKSVCSLVCTSYLRQNHVVSSPHRVNL 84

Query: 114 DMDAASLTHEQAISAVALLASEEGSMVALSFFYWAVGFPKFRYFMRLYIVCTMSLVGKCN 173
           D DA SLTHEQAI+ VA LASE GSMVAL FFYWAVGF KFR+FMRLY+V   SL+   N
Sbjct: 85  DFDANSLTHEQAITVVASLASESGSMVALCFFYWAVGFEKFRHFMRLYLVTADSLLANGN 144

Query: 174 LERAHEVVECMVGVFAEIGKLKEAVDMILDMR 202
           L++AHEV+ CM+  F+EIG+L EAV M++DM+
Sbjct: 145 LQKAHEVMRCMLRNFSEIGRLNEAVGMVMDMQ 174

[Close]

BLAST of CsGy1G032930 vs. Swiss-Prot
Match: sp|P0C8Q3|PP326_ARATH (Pentatricopeptide repeat-containing protein At4g19890 OS=Arabidopsis thaliana OX=3702 GN=At4g19890 PE=2 SV=1)

HSP 1 Score: 150.2 bits (378), Expect = 8.8e-35
Identity = 89/152 (58.55%), Postives = 109/152 (71.71%), Query Frame = 0


Query: 54  SLAFF---SSTHFDS-ISSPHHDFSSSSSLQSPLKKICSLVLDTYLRQPHLRFSPSKLNL 113
           SL FF   SS H  S +S P     SSS  Q  +K +CSLV  +YLRQ H+  SP ++NL
Sbjct: 25  SLFFFRLISSDHESSDLSLP--SSPSSSPSQCLVKSVCSLVCTSYLRQNHVVSSPHRVNL 84

Query: 114 DMDAASLTHEQAISAVALLASEEGSMVALSFFYWAVGFPKFRYFMRLYIVCTMSLVGKCN 173
           D DA SLTHEQAI+ VA LASE GSMVAL FFYWAVGF KFR+FMRLY+V   SL+   N
Sbjct: 85  DFDANSLTHEQAITVVASLASESGSMVALCFFYWAVGFEKFRHFMRLYLVTADSLLANGN 144

Query: 174 LERAHEVVECMVGVFAEIGKLKEAVDMILDMR 202
           L++AHEV+ CM+  F+EIG+L EAV M++DM+
Sbjct: 145 LQKAHEVMRCMLRNFSEIGRLNEAVGMVMDMQ 174

[Close]

BLAST of CsGy1G032930 vs. TrEMBL
Match: tr|A0A0A0LYL9|A0A0A0LYL9_CUCSA (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_1G701980 PE=4 SV=1)

HSP 1 Score: 520.0 bits (1338), Expect = 8.5e-144
Identity = 628/725 (86.62%), Postives = 628/725 (86.62%), Query Frame = 0


Query: 1   MNSTNPRQLALNGGRGPAVFIPLMQFLASLRILRPHGFLQKLCSFQQGSSASASLAFFSS 60
           MNSTNPRQLALNGGRGPAVFIPLMQFLASLRILRPHGFLQKLCSFQQGSSASASLAFFSS
Sbjct: 1   MNSTNPRQLALNGGRGPAVFIPLMQFLASLRILRPHGFLQKLCSFQQGSSASASLAFFSS 60

Query: 61  THFDSISSPHHDFSSSSSLQSPLKKICSLVLDTYLRQPHLRFSPSKLNLDMDAASLTHEQ 120
           THFDSISSPHHDFSSSSSLQSPLKKICSLVLDTYLRQPHLRFSPSKLNLDMDAASLTHEQ
Sbjct: 61  THFDSISSPHHDFSSSSSLQSPLKKICSLVLDTYLRQPHLRFSPSKLNLDMDAASLTHEQ 120

Query: 121 AISAVALLASEEGSMVALSFFYWAVGFPKFRYFMRLYIVCTMSLVGKCNLERAHEVVECM 180
           AISAVALLASEEGSMVALSFFYWAVGFPKFRYFMRLYIVCTMSLVGKCNLERAHEVVECM
Sbjct: 121 AISAVALLASEEGSMVALSFFYWAVGFPKFRYFMRLYIVCTMSLVGKCNLERAHEVVECM 180

Query: 181 VGVFAEIGKLKEAVDMILDMRNQGLVLTTRVMNRIILVAAEMRLVEYAGNVFDEMSARGV 240
           VGVFAEIGKLKEAVDMILDMRNQGLVLTTRVMNRIILVAAEMRLVEYAGNVFDEMSARGV
Sbjct: 181 VGVFAEIGKLKEAVDMILDMRNQGLVLTTRVMNRIILVAAEMRLVEYAGNVFDEMSARGV 240

Query: 241 YPDSCTYKYIIVGYCRNGNVLEXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX 300
           YPDSCTYKYIIVGYCRNGNVLEXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX
Sbjct: 241 YPDSCTYKYIIVGYCRNGNVLEXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX 300

Query: 301 XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX 360
           XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX
Sbjct: 301 XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX 360

Query: 361 XXXXXXXXXXXXXXXXXSDXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXKEQ------ 420
           XXXXXXXXXXXXXXXXXSDXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXKEQ      
Sbjct: 361 XXXXXXXXXXXXXXXXXSDXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXKEQXXXXXX 420

Query: 421 -------------------------------XXXXXXXXXXXXXXXXXXXXXXXXXXXXX 480
                                          XXXXXXXXXXXXXXXXXXXXXXXXXXXXX
Sbjct: 421 XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX 480

Query: 481 XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXFQNQIEADGVTYTILISEQQNM 540
           XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX                      
Sbjct: 481 XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX 540

Query: 541 MKDSEKLFDEVIKLGLAPTKETYTSMICGYCREKKVSLXXXXXXXXXXXXXXXXXXXXXX 600
                                                 XXXXXXXXXXXXXXXXXXXXXX
Sbjct: 541 XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX 600

Query: 601 XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXASAMVILERLNKKL 660
           XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXASAMVILERLNKKL
Sbjct: 601 XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXASAMVILERLNKKL 660

Query: 661 WIRTVHTLIRKLCCEKKVALAALFFHKLLDKEVNVDRVTLAAFNTACIESNKYALVSDLS 689
           WIRTVHTLIRKLCCEKKVALAALFFHKLLDKEVNVDRVTLAAFNTACIESNKYALVSDLS
Sbjct: 661 WIRTVHTLIRKLCCEKKVALAALFFHKLLDKEVNVDRVTLAAFNTACIESNKYALVSDLS 720

[Close]

BLAST of CsGy1G032930 vs. TrEMBL
Match: tr|A0A1S3CAH0|A0A1S3CAH0_CUCME (pentatricopeptide repeat-containing protein At4g19890 OS=Cucumis melo OX=3656 GN=LOC103498266 PE=4 SV=1)

HSP 1 Score: 339.7 bits (870), Expect = 1.6e-89
Identity = 178/194 (91.75%), Postives = 184/194 (94.85%), Query Frame = 0


Query: 24  MQFLASLRILRPHGFLQKLCSFQQGSSASASLAFFSSTHFDSISSPHHDFSSSSSLQSPL 83
           MQFLAS RILR HGFLQKLCS Q GSS SAS+AFFSSTHFDSISSPHHDF SSSSLQSP+
Sbjct: 1   MQFLASHRILRTHGFLQKLCSLQHGSSVSASIAFFSSTHFDSISSPHHDF-SSSSLQSPV 60

Query: 84  KKICSLVLDTYLRQPHLRFSPSKLNLDMDAASLTHEQAISAVALLASEEGSMVALSFFYW 143
           +K CSLVL+ YLRQPHLRFSPSKLNLDMDA SLTHEQAISAVA LASEEGSMVALSFFYW
Sbjct: 61  QKTCSLVLEAYLRQPHLRFSPSKLNLDMDADSLTHEQAISAVASLASEEGSMVALSFFYW 120

Query: 144 AVGFPKFRYFMRLYIVCTMSLVGKCNLERAHEVVECMVGVFAEIGKLKEAVDMILDMRNQ 203
           A+GFPKFRYFMRLYIVCTMSL+GKCNLERAHEVVECMVGVFAEIGKLKEAVDMILDMRNQ
Sbjct: 121 AIGFPKFRYFMRLYIVCTMSLIGKCNLERAHEVVECMVGVFAEIGKLKEAVDMILDMRNQ 180

Query: 204 GLVLTTRVMNRIIL 218
           GLVLTTRVMNRIIL
Sbjct: 181 GLVLTTRVMNRIIL 193

[Close]

BLAST of CsGy1G032930 vs. TrEMBL
Match: tr|M5WK57|M5WK57_PRUPE (Uncharacterized protein (Fragment) OS=Prunus persica OX=3760 GN=PRUPE_ppa015022mg PE=4 SV=1)

HSP 1 Score: 235.7 bits (600), Expect = 3.2e-58
Identity = 135/253 (53.36%), Postives = 170/253 (67.19%), Query Frame = 0


Query: 27  LASLRIL-RPHGFLQKLCSFQQGSSASASLAFFSSTHFDSISSPHHDFSSSSSLQSP--- 86
           + SLRIL R H   QKL S     +++    F++     ++S  H+D   S+        
Sbjct: 1   MVSLRILRRTHELQQKLLS----PASNPISIFYTLFSLRTLSYTHYDDPYSTXXXXXXXX 60

Query: 87  -------------LKKICSLVLDTYLRQPHLRFSPSKLNLDMDAASLTHEQAISAVALLA 146
                        ++ IC+LV  +Y  Q HLR SP KLNLD++A SLT+EQAIS VA LA
Sbjct: 61  XXXXXXXXXXXXLVRTICALVCQSYSPQTHLRSSPPKLNLDLNADSLTNEQAISVVASLA 120

Query: 147 SEEGSMVALSFFYWAVGFPKFRYFMRLYIVCTMSLVGKCNLERAHEVVECMVGVFAEIGK 206
            E GSMVALSFFYWA+GFPKFRYFMRLYI C MSL G  NLERAHEVV CMV  FAEIG+
Sbjct: 121 EEAGSMVALSFFYWAIGFPKFRYFMRLYIFCAMSLFGNGNLERAHEVVHCMVRNFAEIGR 180

Query: 207 LKEAVDMILDMRNQGLVLTTRVMNRIILVAAEMRLVEYAGNVFDEMSARGVYPDSCTYKY 263
           LKEA DM+ +M+NQGL+L+TR +N ++ +A ++ LVEYA N+F+EM  RGV PDS +YK 
Sbjct: 181 LKEAADMVFEMQNQGLMLSTRTLNCVLGIACDLGLVEYAENLFEEMCVRGVSPDSLSYKS 240

[Close]

BLAST of CsGy1G032930 vs. TrEMBL
Match: tr|W9RA33|W9RA33_9ROSA (Uncharacterized protein OS=Morus notabilis OX=981085 GN=L484_008796 PE=4 SV=1)

HSP 1 Score: 222.2 bits (565), Expect = 3.7e-54
Identity = 128/256 (50.00%), Postives = 164/256 (64.06%), Query Frame = 0


Query: 27  LASLRILRPHGFLQKLCSFQQGSSASASLAFFSSTHFDSISSP-------HHDFSSSS-- 86
           + S   LR HG        QQ  SA +SL  F  T   S+ SP       +HD+ S+   
Sbjct: 1   MLSTLFLRSHG-----VGLQQKLSAISSLNSFLYTSLHSLFSPKTFSSNSYHDYLSAGPX 60

Query: 87  -------------SLQSPLKKICSLVLDTYLRQPHLRFSPSKLNLDMDAASLTHEQAISA 146
                             ++ +CSLV ++Y +  H R SP KL L++D  SLTHEQAI+ 
Sbjct: 61  XXXXXXXXXXXXXXXXXXIRTVCSLVFESYYQHGHGRQSPPKLILNVDTDSLTHEQAITV 120

Query: 147 VALLASEEGSMVALSFFYWAVGFPKFRYFMRLYIVCTMSLVGKCNLERAHEVVECMVGVF 206
           VA LA E GSMVALSFFYWA+ F KFR+FMRLYIVC MSL+G  NLERAHEV++CM+G F
Sbjct: 121 VASLADEGGSMVALSFFYWAIEFSKFRHFMRLYIVCAMSLIGNGNLERAHEVMQCMLGSF 180

Query: 207 AEIGKLKEAVDMILDMRNQGLVLTTRVMNRIILVAAEMRLVEYAGNVFDEMSARGVYPDS 261
           AEIG+LKEA DMILD++NQGL+LTT ++N ++ +A EM  +EYA  +F+EM  R V PD 
Sbjct: 181 AEIGRLKEAGDMILDLQNQGLMLTTHILNSVVRIAWEMNSIEYAEEMFEEMCQREVSPDP 240

[Close]

BLAST of CsGy1G032930 vs. TrEMBL
Match: tr|A0A059C4G0|A0A059C4G0_EUCGR (Uncharacterized protein OS=Eucalyptus grandis OX=71139 GN=EUGRSUZ_E01800 PE=4 SV=1)

HSP 1 Score: 205.3 bits (521), Expect = 4.7e-49
Identity = 102/174 (58.62%), Postives = 136/174 (78.16%), Query Frame = 0


Query: 89  LVLDTYLRQPHLRFSPSKLNLDMDAASLTHEQAISAVALLASEEGSMVALSFFYWAVGFP 148
           +V D Y ++ H+R SP +L L+++  +LTHEQAI+ VA LA+E GSMVALSFFYWA+G+ 
Sbjct: 1   MVRDAYYKRAHVRASPPRLCLNVNCETLTHEQAITVVASLANEAGSMVALSFFYWAIGYD 60

Query: 149 KFRYFMRLYIVCTMSLVGKCNLERAHEVVECMVGVFAEIGKLKEAVDMILDMRNQGLVLT 208
           KFR+FMRLYIVC  SL+G  N ERA+EV++CMV  FAEIG+LKEA+DM L+M+NQGLV T
Sbjct: 61  KFRHFMRLYIVCATSLIGNGNSERANEVMQCMVKSFAEIGRLKEAIDMALEMQNQGLVPT 120

Query: 209 TRVMNRIILVAAEMRLVEYAGNVFDEMSARGVYPDSCTYKYIIVGYCRNGNVLE 263
           TR+MN ++ VA     ++YA NVFD +S RGV PD  +YK ++V YCR G+++E
Sbjct: 121 TRLMNFVMEVAIGRGCLDYAQNVFDYLSERGVCPDPNSYKLMVVAYCRMGSIVE 174

The following BLAST results are available for this feature:

BLAST of CsGy1G032930 vs. NCBI nr


Match Name	E-value	Identity	Description
KGN66873.1	1.3e-143	86.62	hypothetical protein Csa_1G701980 [Cucumis sativus]	[more]
XP_004145475.2	1.8e-129	86.18	PREDICTED: pentatricopeptide repeat-containing protein At4g19890 [Cucumis sativu...	[more]
XP_008459042.1	2.4e-89	91.75	PREDICTED: pentatricopeptide repeat-containing protein At4g19890 [Cucumis melo]	[more]
XP_023541359.1	2.7e-72	79.27	pentatricopeptide repeat-containing protein At4g19890 [Cucurbita pepo subsp. pep...	[more]
XP_022994748.1	1.3e-71	80.00	pentatricopeptide repeat-containing protein At4g19890 [Cucurbita maxima]	[more]

BLAST of CsGy1G032930 vs. TAIR10


Match Name	E-value	Identity	Description
AT4G19890.1	4.9e-36	58.55	Pentatricopeptide repeat (PPR-like) superfamily protein	[more]

BLAST of CsGy1G032930 vs. Swiss-Prot


Match Name	E-value	Identity	Description
sp\|P0C8Q3\|PP326_ARATH	8.8e-35	58.55	Pentatricopeptide repeat-containing protein At4g19890 OS=Arabidopsis thaliana OX...	[more]

BLAST of CsGy1G032930 vs. TrEMBL


Match Name	E-value	Identity	Description
tr\|A0A0A0LYL9\|A0A0A0LYL9_CUCSA	8.5e-144	86.62	Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_1G701980 PE=4 SV=1	[more]
tr\|A0A1S3CAH0\|A0A1S3CAH0_CUCME	1.6e-89	91.75	pentatricopeptide repeat-containing protein At4g19890 OS=Cucumis melo OX=3656 GN...	[more]
tr\|M5WK57\|M5WK57_PRUPE	3.2e-58	53.36	Uncharacterized protein (Fragment) OS=Prunus persica OX=3760 GN=PRUPE_ppa015022m...	[more]
tr\|W9RA33\|W9RA33_9ROSA	3.7e-54	50.00	Uncharacterized protein OS=Morus notabilis OX=981085 GN=L484_008796 PE=4 SV=1	[more]
tr\|A0A059C4G0\|A0A059C4G0_EUCGR	4.7e-49	58.62	Uncharacterized protein OS=Eucalyptus grandis OX=71139 GN=EUGRSUZ_E01800 PE=4 SV...	[more]

Annotated Terms

The following terms have been associated with this gene:

Vocabulary: **Molecular Function**
Term	Definition
GO:0005515	protein binding

Vocabulary: **INTERPRO**
Term	Definition
IPR002885	Pentatricopeptide_repeat
IPR011990	TPR-like_helical_dom_sf

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0008150	biological_process
cellular_component	GO:0005575	cellular_component
molecular_function	GO:0003674	molecular_function
molecular_function	GO:0005515	protein binding

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
CsGy1G032930.1	CsGy1G032930.1	mRNA

InterPro

Analysis Name: InterPro Annotations of cucumber Gy14 genome (v2)
Date Performed: 2018-09-25


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR011990	Tetratricopeptide-like helical domain superfamily	GENE3D	G3DSA:1.25.40.10		coord: 413..482 e-value: 5.8E-23 score: 83.4
IPR011990	Tetratricopeptide-like helical domain superfamily	GENE3D	G3DSA:1.25.40.10		coord: 483..624 e-value: 1.4E-34 score: 121.9
IPR011990	Tetratricopeptide-like helical domain superfamily	GENE3D	G3DSA:1.25.40.10		coord: 294..412 e-value: 6.4E-36 score: 126.4
IPR011990	Tetratricopeptide-like helical domain superfamily	GENE3D	G3DSA:1.25.40.10		coord: 170..293 e-value: 1.6E-21 score: 78.4
IPR002885	Pentatricopeptide repeat	TIGRFAM	TIGR00756	TIGR00756	coord: 422..455 e-value: 1.3E-10 score: 38.7 coord: 559..591 e-value: 2.4E-8 score: 31.7 coord: 245..278 e-value: 1.4E-7 score: 29.3 coord: 525..558 e-value: 1.8E-10 score: 38.4 coord: 350..385 e-value: 2.1E-6 score: 25.5 coord: 386..420 e-value: 7.7E-11 score: 39.5 coord: 456..479 e-value: 2.7E-5 score: 22.0 coord: 317..349 e-value: 5.0E-10 score: 36.9
IPR002885	Pentatricopeptide repeat	PFAM	PF01535	PPR	coord: 179..205 e-value: 0.84 score: 9.9
IPR002885	Pentatricopeptide repeat	PFAM	PF12854	PPR_1	coord: 450..479 e-value: 1.4E-11 score: 43.8
IPR002885	Pentatricopeptide repeat	PFAM	PF13041	PPR_2	coord: 245..290 e-value: 4.2E-8 score: 33.1 coord: 383..432 e-value: 7.6E-20 score: 70.7 coord: 525..570 e-value: 7.4E-15 score: 54.8 coord: 312..361 e-value: 5.2E-18 score: 64.9
IPR002885	Pentatricopeptide repeat	PROSITE	PS51375	PPR	coord: 384..418 score: 13.91
IPR002885	Pentatricopeptide repeat	PROSITE	PS51375	PPR	coord: 278..312 score: 9.153
IPR002885	Pentatricopeptide repeat	PROSITE	PS51375	PPR	coord: 419..453 score: 12.726
IPR002885	Pentatricopeptide repeat	PROSITE	PS51375	PPR	coord: 557..591 score: 13.537
IPR002885	Pentatricopeptide repeat	PROSITE	PS51375	PPR	coord: 348..383 score: 10.874
IPR002885	Pentatricopeptide repeat	PROSITE	PS51375	PPR	coord: 208..242 score: 7.41
IPR002885	Pentatricopeptide repeat	PROSITE	PS51375	PPR	coord: 173..207 score: 7.059
IPR002885	Pentatricopeptide repeat	PROSITE	PS51375	PPR	coord: 522..556 score: 12.419
IPR002885	Pentatricopeptide repeat	PROSITE	PS51375	PPR	coord: 592..622 score: 5.064
IPR002885	Pentatricopeptide repeat	PROSITE	PS51375	PPR	coord: 243..277 score: 10.709
IPR002885	Pentatricopeptide repeat	PROSITE	PS51375	PPR	coord: 313..347 score: 13.318
IPR002885	Pentatricopeptide repeat	PROSITE	PS51375	PPR	coord: 454..488 score: 9.964
IPR002885	Pentatricopeptide repeat	PROSITE	PS51375	PPR	coord: 624..658 score: 5.229
None	No IPR available	PANTHER	PTHR24015	FAMILY NOT NAMED	coord: 500..624 coord: 37..500
None	No IPR available	PANTHER	PTHR24015:SF325	SUBFAMILY NOT NAMED	coord: 500..624 coord: 37..500
None	No IPR available	SUPERFAMILY	SSF81901	HCP-like	coord: 327..554

Synteny

The following gene(s) are orthologous to this gene:


Gene	Orthologue	Organism	Block
CsGy1G032930	Cla004616	Watermelon (97103) v1	cgybwmB045
CsGy1G032930	Csa1G701980	Cucumber (Chinese Long) v2	cgybcuB002
CsGy1G032930	MELO3C021752	Melon (DHL92) v3.5.1	cgybmeB012
CsGy1G032930	ClCG01G009470	Watermelon (Charleston Gray)	cgybwcgB022
CsGy1G032930	CSPI01G34460	Wild cucumber (PI 183967)	cgybcpiB002
CsGy1G032930	CmaCh18G005600	Cucurbita maxima (Rimu)	cgybcmaB096
CsGy1G032930	CmoCh18G005370	Cucurbita moschata (Rifu)	cgybcmoB090
CsGy1G032930	Lsi02G010500	Bottle gourd (USVL1VR-Ls)	cgyblsiB030
CsGy1G032930	Cp4.1LG09g06800	Cucurbita pepo (Zucchini)	cgybcpeB008
CsGy1G032930	MELO3C021752.2	Melon (DHL92) v3.6.1	cgybmedB011
CsGy1G032930	CsaV3_1G046310	Cucumber (Chinese Long) v3	cgybcucB001
CsGy1G032930	Cla97C01G009700	Watermelon (97103) v2	cgybwmbB011
CsGy1G032930	Bhi08G000730	Wax gourd	cgybwgoB028

The following gene(s) are paralogous to this gene:

None

The following block(s) are covering this gene:


Gene	Organism	Block
CsGy1G032930	Cucurbita maxima (Rimu)	cgybcmaB065
CsGy1G032930	Cucurbita moschata (Rifu)	cgybcmoB061
CsGy1G032930	Cucurbita pepo (Zucchini)	cgybcpeB083
CsGy1G032930	Watermelon (97103) v1	cgybwmB050