Cp4.1LG09g06800 (gene) Cucurbita pepo (Zucchini)

NameCp4.1LG09g06800
Typegene
OrganismCucurbita pepo (Cucurbita pepo (Zucchini))
DescriptionPentatricopeptide repeat-containing protein
LocationCp4.1LG09 : 5955490 .. 5957682 (+)
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: CDS
Hold the cursor over a type above to highlight its positions in the sequence below.
ATGAACGCAACTAGTCCAAGACAATTCGCATCGCATGGGGGCAGAGCTCCTGCGACCTTCATGCCTTCGATGCAATTCTTGGCGTCTCTCCGAATTCTAAGGCTCCATGGATTTCTCCACAAATTTTCCTTTCCACAACGATTATCAGTTTCTGCCTCAGCGGGATTGTTCTCCTCATCTCATTTCGATTCCATCTCTTCGCCGCACCGTGATTCTTCTTCTTCTTCTTCTTGTTCTTCGTTGCAATCTCCAGTGCAAACGATTTGTTCATTGGTCATCGAGTCTTATTTTCGCCAACCCCATTTGAGATTCTCTCCTTTAAAGCTGAATCTTGATATGGATGCTGATTTTTTGACTCACGAGCAAGCCATTTCAGTCGTTGCTTCACTTGCTAGCGAGGAGGGTTCAATGATGGCGTTGAGTTTCTTTTACTGGGCAATTGGATTCCCCAAATTTCGCTATTTCATGCGGCTTTACATAGTTTGTACGATGTTATTGGTTGGGAAATGCAAACAGGAGCGAGCCGATGAAGTGGTGGAGTGTATGATAGGGGTTTTTGCAGAAATTGGGAAGTTGAAGGAGGCTGTGGATATGATCATTGACATGAGAAACCAGGGGCTTGTGTTGACCACCAGAGTAATGAATCGTATAATCATGGTGGCTGCTGAAATGGGGCTGCTCGAATATGCAGGCAACATGTTCGACGAAATGTCTGCAAGAGGTATGGCTCCAAATTCTTGCACTTATAAGTCTATAATTGTTGGTAACTGTAGATATGGCAATGTTTTGGACGTAGATAGGTGGTTAAATGAGATGATGGAGAGAGGTTTTGTTGTTGATAATGCCACATTGACTTTGATTATTAATGCTTTTTGTAAAAAGAGCTTTGTAAGCAGAGCATTTTGGTTGTTTCATAAGGTTAAAAAGATGGGTTTATCACCAAATTTGATAAACTATTCATCTATGATTAGTGGGTTATGCAAGAGGGGTAGTGTTAAGCAAGCATTTGAATTATTGGAAGAAATGGTTAGAAATGGCTGGAAACCCAATGTGTATACCCACACATCATTAATCGATGGGCTTTGCAAGAAAGGGTGGACTGATAGAGCTTTTAGACTGTTTCTTAAGCTTGTTAGAAGTGATATTTACAAGCCAAATGTGTACACATACACAGCCATGATAAGTGGGTATTGCAAAGAGGAGAAGTTGAATAGAGCTGAAATGTTGTTTGAAAGAATGAAGGAACAAGGAATGGTTCCAAACACTAACACTTACACTACTCTCATTGATGGGCATTGTAAGGCAGGGAATTTCAGTAGAGCCTATGAATTAATGGAGGTTATGTGTAATGAAGGTTTCTTCCCTAACATATGTACTTACAATGCAATTGTTGATGGTCTCTGTAAAAAAGGGCGAGTCGAAGAGGCTTTCAAATTGCTAAATAAAGGGTGTCGGAATCGAGTTGAAGCCGACGCTGTCACGTACAACATTCTGATATCTGAACAATGTAAACATGCCGATTTGAATCGAGCCCTTATGTTTTTAACTAAGATGCTTAAAGTTGGTTTTCAGCCTGATGTCCATTTGTATACCACTTTGATCTCTGCCTTCTGCAGGCAGAAAATGATGAACGATAGCGAGAAGTTGTTCGATGAAGTCGTTAAGCTTGGGTTCGTTCCGACAAAGGAAACTTACACATCCATGATATGTGGCTATTGTAGGGAAAGAAAAATTGACTTAGCAGTCAAGTTTTTCCAGCGGATGAATGTCCATGGTTGTGCACCAGATAGCATTAGTTATGGTGCTTTAATCAGTGGTCTTTGCAAAGAGTCGAGGTTGGACGAGGCTCGACAATTATATGATGTCATGATAGACAATGGGCTGACTCCGTGCGAGGTTACTCGGGTGACCTTAGCTTATGAGTATTGCAAAACAGAAGAGTTCGCTTCAGCCATGGTTATCTTGGAACGGCTCGACAAGAAGCTTTGGATACGCACGGTCCATACGCTAATACGCAAGCTTTGTAGTGAGAAGAAAGTCGGCATGGCAGCTCTCTTCTTTCATAAGTTACTTGATAAGGAAGTCAATGTCGATCGAGTGAGTTTGGCTGCATTCATGACTGCTTGTTGTGAGAGCAACAAATATGCTCTTGTTTCTGATTTGACGGAGAGGATATCAAGAGGTATTGGCTAA

mRNA sequence

ATGAACGCAACTAGTCCAAGACAATTCGCATCGCATGGGGGCAGAGCTCCTGCGACCTTCATGCCTTCGATGCAATTCTTGGCGTCTCTCCGAATTCTAAGGCTCCATGGATTTCTCCACAAATTTTCCTTTCCACAACGATTATCAGTTTCTGCCTCAGCGGGATTGTTCTCCTCATCTCATTTCGATTCCATCTCTTCGCCGCACCGTGATTCTTCTTCTTCTTCTTCTTGTTCTTCGTTGCAATCTCCAGTGCAAACGATTTGTTCATTGGTCATCGAGTCTTATTTTCGCCAACCCCATTTGAGATTCTCTCCTTTAAAGCTGAATCTTGATATGGATGCTGATTTTTTGACTCACGAGCAAGCCATTTCAGTCGTTGCTTCACTTGCTAGCGAGGAGGGTTCAATGATGGCGTTGAGTTTCTTTTACTGGGCAATTGGATTCCCCAAATTTCGCTATTTCATGCGGCTTTACATAGTTTGTACGATGTTATTGGTTGGGAAATGCAAACAGGAGCGAGCCGATGAAGTGGTGGAGTGTATGATAGGGGTTTTTGCAGAAATTGGGAAGTTGAAGGAGGCTGTGGATATGATCATTGACATGAGAAACCAGGGGCTTGTGTTGACCACCAGAGTAATGAATCGTATAATCATGGTGGCTGCTGAAATGGGGCTGCTCGAATATGCAGGCAACATGTTCGACGAAATGTCTGCAAGAGGTATGGCTCCAAATTCTTGCACTTATAAGTCTATAATTGTTGGTAACTGTAGATATGGCAATGTTTTGGACGTAGATAGGTGGTTAAATGAGATGATGGAGAGAGGTTTTGTTGTTGATAATGCCACATTGACTTTGATTATTAATGCTTTTTGTAAAAAGAGCTTTGTAAGCAGAGCATTTTGGTTGTTTCATAAGGTTAAAAAGATGGGTTTATCACCAAATTTGATAAACTATTCATCTATGATTAGTGGGTTATGCAAGAGGGGTAGTGTTAAGCAAGCATTTGAATTATTGGAAGAAATGGTTAGAAATGGCTGGAAACCCAATGTGTATACCCACACATCATTAATCGATGGGCTTTGCAAGAAAGGGTGGACTGATAGAGCTTTTAGACTGTTTCTTAAGCTTGTTAGAAGTGATATTTACAAGCCAAATGTGTACACATACACAGCCATGATAAGTGGGTATTGCAAAGAGGAGAAGTTGAATAGAGCTGAAATGTTGTTTGAAAGAATGAAGGAACAAGGAATGGTTCCAAACACTAACACTTACACTACTCTCATTGATGGGCATTGTAAGGCAGGGAATTTCAGTAGAGCCTATGAATTAATGGAGGTTATGTGTAATGAAGGTTTCTTCCCTAACATATGTACTTACAATGCAATTGTTGATGGTCTCTGTAAAAAAGGGCGAGTCGAAGAGGCTTTCAAATTGCTAAATAAAGGGTGTCGGAATCGAGTTGAAGCCGACGCTGTCACGTACAACATTCTGATATCTGAACAATGTAAACATGCCGATTTGAATCGAGCCCTTATGTTTTTAACTAAGATGCTTAAAGTTGGTTTTCAGCCTGATGTCCATTTGTATACCACTTTGATCTCTGCCTTCTGCAGGCAGAAAATGATGAACGATAGCGAGAAGTTGTTCGATGAAGTCGTTAAGCTTGGGTTCGTTCCGACAAAGGAAACTTACACATCCATGATATGTGGCTATTGTAGGGAAAGAAAAATTGACTTAGCAGTCAAGTTTTTCCAGCGGATGAATGTCCATGGTTGTGCACCAGATAGCATTAGTTATGGTGCTTTAATCAGTGGTCTTTGCAAAGAGTCGAGGTTGGACGAGGCTCGACAATTATATGATGTCATGATAGACAATGGGCTGACTCCGTGCGAGGTTACTCGGGTGACCTTAGCTTATGAGTATTGCAAAACAGAAGAGTTCGCTTCAGCCATGGTTATCTTGGAACGGCTCGACAAGAAGCTTTGGATACGCACGGTCCATACGCTAATACGCAAGCTTTGTAGTGAGAAGAAAGTCGGCATGGCAGCTCTCTTCTTTCATAAGTTACTTGATAAGGAAGTCAATGTCGATCGAGTGAGTTTGGCTGCATTCATGACTGCTTGTTGTGAGAGCAACAAATATGCTCTTGTTTCTGATTTGACGGAGAGGATATCAAGAGGTATTGGCTAA

Coding sequence (CDS)

ATGAACGCAACTAGTCCAAGACAATTCGCATCGCATGGGGGCAGAGCTCCTGCGACCTTCATGCCTTCGATGCAATTCTTGGCGTCTCTCCGAATTCTAAGGCTCCATGGATTTCTCCACAAATTTTCCTTTCCACAACGATTATCAGTTTCTGCCTCAGCGGGATTGTTCTCCTCATCTCATTTCGATTCCATCTCTTCGCCGCACCGTGATTCTTCTTCTTCTTCTTCTTGTTCTTCGTTGCAATCTCCAGTGCAAACGATTTGTTCATTGGTCATCGAGTCTTATTTTCGCCAACCCCATTTGAGATTCTCTCCTTTAAAGCTGAATCTTGATATGGATGCTGATTTTTTGACTCACGAGCAAGCCATTTCAGTCGTTGCTTCACTTGCTAGCGAGGAGGGTTCAATGATGGCGTTGAGTTTCTTTTACTGGGCAATTGGATTCCCCAAATTTCGCTATTTCATGCGGCTTTACATAGTTTGTACGATGTTATTGGTTGGGAAATGCAAACAGGAGCGAGCCGATGAAGTGGTGGAGTGTATGATAGGGGTTTTTGCAGAAATTGGGAAGTTGAAGGAGGCTGTGGATATGATCATTGACATGAGAAACCAGGGGCTTGTGTTGACCACCAGAGTAATGAATCGTATAATCATGGTGGCTGCTGAAATGGGGCTGCTCGAATATGCAGGCAACATGTTCGACGAAATGTCTGCAAGAGGTATGGCTCCAAATTCTTGCACTTATAAGTCTATAATTGTTGGTAACTGTAGATATGGCAATGTTTTGGACGTAGATAGGTGGTTAAATGAGATGATGGAGAGAGGTTTTGTTGTTGATAATGCCACATTGACTTTGATTATTAATGCTTTTTGTAAAAAGAGCTTTGTAAGCAGAGCATTTTGGTTGTTTCATAAGGTTAAAAAGATGGGTTTATCACCAAATTTGATAAACTATTCATCTATGATTAGTGGGTTATGCAAGAGGGGTAGTGTTAAGCAAGCATTTGAATTATTGGAAGAAATGGTTAGAAATGGCTGGAAACCCAATGTGTATACCCACACATCATTAATCGATGGGCTTTGCAAGAAAGGGTGGACTGATAGAGCTTTTAGACTGTTTCTTAAGCTTGTTAGAAGTGATATTTACAAGCCAAATGTGTACACATACACAGCCATGATAAGTGGGTATTGCAAAGAGGAGAAGTTGAATAGAGCTGAAATGTTGTTTGAAAGAATGAAGGAACAAGGAATGGTTCCAAACACTAACACTTACACTACTCTCATTGATGGGCATTGTAAGGCAGGGAATTTCAGTAGAGCCTATGAATTAATGGAGGTTATGTGTAATGAAGGTTTCTTCCCTAACATATGTACTTACAATGCAATTGTTGATGGTCTCTGTAAAAAAGGGCGAGTCGAAGAGGCTTTCAAATTGCTAAATAAAGGGTGTCGGAATCGAGTTGAAGCCGACGCTGTCACGTACAACATTCTGATATCTGAACAATGTAAACATGCCGATTTGAATCGAGCCCTTATGTTTTTAACTAAGATGCTTAAAGTTGGTTTTCAGCCTGATGTCCATTTGTATACCACTTTGATCTCTGCCTTCTGCAGGCAGAAAATGATGAACGATAGCGAGAAGTTGTTCGATGAAGTCGTTAAGCTTGGGTTCGTTCCGACAAAGGAAACTTACACATCCATGATATGTGGCTATTGTAGGGAAAGAAAAATTGACTTAGCAGTCAAGTTTTTCCAGCGGATGAATGTCCATGGTTGTGCACCAGATAGCATTAGTTATGGTGCTTTAATCAGTGGTCTTTGCAAAGAGTCGAGGTTGGACGAGGCTCGACAATTATATGATGTCATGATAGACAATGGGCTGACTCCGTGCGAGGTTACTCGGGTGACCTTAGCTTATGAGTATTGCAAAACAGAAGAGTTCGCTTCAGCCATGGTTATCTTGGAACGGCTCGACAAGAAGCTTTGGATACGCACGGTCCATACGCTAATACGCAAGCTTTGTAGTGAGAAGAAAGTCGGCATGGCAGCTCTCTTCTTTCATAAGTTACTTGATAAGGAAGTCAATGTCGATCGAGTGAGTTTGGCTGCATTCATGACTGCTTGTTGTGAGAGCAACAAATATGCTCTTGTTTCTGATTTGACGGAGAGGATATCAAGAGGTATTGGCTAA

Protein sequence

MNATSPRQFASHGGRAPATFMPSMQFLASLRILRLHGFLHKFSFPQRLSVSASAGLFSSSHFDSISSPHRDSSSSSSCSSLQSPVQTICSLVIESYFRQPHLRFSPLKLNLDMDADFLTHEQAISVVASLASEEGSMMALSFFYWAIGFPKFRYFMRLYIVCTMLLVGKCKQERADEVVECMIGVFAEIGKLKEAVDMIIDMRNQGLVLTTRVMNRIIMVAAEMGLLEYAGNMFDEMSARGMAPNSCTYKSIIVGNCRYGNVLDVDRWLNEMMERGFVVDNATLTLIINAFCKKSFVSRAFWLFHKVKKMGLSPNLINYSSMISGLCKRGSVKQAFELLEEMVRNGWKPNVYTHTSLIDGLCKKGWTDRAFRLFLKLVRSDIYKPNVYTYTAMISGYCKEEKLNRAEMLFERMKEQGMVPNTNTYTTLIDGHCKAGNFSRAYELMEVMCNEGFFPNICTYNAIVDGLCKKGRVEEAFKLLNKGCRNRVEADAVTYNILISEQCKHADLNRALMFLTKMLKVGFQPDVHLYTTLISAFCRQKMMNDSEKLFDEVVKLGFVPTKETYTSMICGYCRERKIDLAVKFFQRMNVHGCAPDSISYGALISGLCKESRLDEARQLYDVMIDNGLTPCEVTRVTLAYEYCKTEEFASAMVILERLDKKLWIRTVHTLIRKLCSEKKVGMAALFFHKLLDKEVNVDRVSLAAFMTACCESNKYALVSDLTERISRGIG
BLAST of Cp4.1LG09g06800 vs. Swiss-Prot
Match: PP326_ARATH (Pentatricopeptide repeat-containing protein At4g19890 OS=Arabidopsis thaliana GN=At4g19890 PE=2 SV=1)

HSP 1 Score: 875.2 bits (2260), Expect = 5.1e-253
Identity = 432/693 (62.34%), Postives = 532/693 (76.77%), Query Frame = 1

Query: 39  LHKFSFPQRLSVSASAGLFSSSHFDS-ISSPHRDSSSSSSCSSLQSPVQTICSLVIESYF 98
           L  F  P  L       L SS H  S +S P   SSS S C      V+++CSLV  SY 
Sbjct: 14  LRTFEIPNSLCSLFFFRLISSDHESSDLSLPSSPSSSPSQCL-----VKSVCSLVCTSYL 73

Query: 99  RQPHLRFSPLKLNLDMDADFLTHEQAISVVASLASEEGSMMALSFFYWAIGFPKFRYFMR 158
           RQ H+  SP ++NLD DA+ LTHEQAI+VVASLASE GSM+AL FFYWA+GF KFR+FMR
Sbjct: 74  RQNHVVSSPHRVNLDFDANSLTHEQAITVVASLASESGSMVALCFFYWAVGFEKFRHFMR 133

Query: 159 LYIVCTMLLVGKCKQERADEVVECMIGVFAEIGKLKEAVDMIIDMRNQGLVLTTRVMNRI 218
           LY+V    L+     ++A EV+ CM+  F+EIG+L EAV M++DM+NQGL  ++  MN +
Sbjct: 134 LYLVTADSLLANGNLQKAHEVMRCMLRNFSEIGRLNEAVGMVMDMQNQGLTPSSITMNCV 193

Query: 219 IMVAAEMGLLEYAGNMFDEMSARGMAPNSCTYKSIIVGNCRYGNVLDVDRWLNEMMERGF 278
           + +A E+GL+EYA N+FDEMS RG+ P+S +YK +++G  R G + + DRWL  M++RGF
Sbjct: 194 LEIAVELGLIEYAENVFDEMSVRGVVPDSSSYKLMVIGCFRDGKIQEADRWLTGMIQRGF 253

Query: 279 VVDNATLTLIINAFCKKSFVSRAFWLFHKVKKMGLSPNLINYSSMISGLCKRGSVKQAFE 338
           + DNAT TLI+ A C+   V+RA W F K+  +G  PNLIN++S+I GLCK+GS+KQAFE
Sbjct: 254 IPDNATCTLILTALCENGLVNRAIWYFRKMIDLGFKPNLINFTSLIDGLCKKGSIKQAFE 313

Query: 339 LLEEMVRNGWKPNVYTHTSLIDGLCKKGWTDRAFRLFLKLVRSDIYKPNVYTYTAMISGY 398
           +LEEMVRNGWKPNVYTHT+LIDGLCK+GWT++AFRLFLKLVRSD YKPNV+TYT+MI GY
Sbjct: 314 MLEEMVRNGWKPNVYTHTALIDGLCKRGWTEKAFRLFLKLVRSDTYKPNVHTYTSMIGGY 373

Query: 399 CKEEKLNRAEMLFERMKEQGMVPNTNTYTTLIDGHCKAGNFSRAYELMEVMCNEGFFPNI 458
           CKE+KLNRAEMLF RMKEQG+ PN NTYTTLI+GHCKAG+F RAYELM +M +EGF PNI
Sbjct: 374 CKEDKLNRAEMLFSRMKEQGLFPNVNTYTTLINGHCKAGSFGRAYELMNLMGDEGFMPNI 433

Query: 459 CTYNAIVDGLCKKGRVEEAFKLLNKGCRNRVEADAVTYNILISEQCKHADLNRALMFLTK 518
            TYNA +D LCKK R  EA++LLNK     +EAD VTY ILI EQCK  D+N+AL F  +
Sbjct: 434 YTYNAAIDSLCKKSRAPEAYELLNKAFSCGLEADGVTYTILIQEQCKQNDINQALAFFCR 493

Query: 519 MLKVGFQPDVHLYTTLISAFCRQKMMNDSEKLFDEVVKLGFVPTKETYTSMICGYCRERK 578
           M K GF+ D+ L   LI+AFCRQK M +SE+LF  VV LG +PTKETYTSMI  YC+E  
Sbjct: 494 MNKTGFEADMRLNNILIAAFCRQKKMKESERLFQLVVSLGLIPTKETYTSMISCYCKEGD 553

Query: 579 IDLAVKFFQRMNVHGCAPDSISYGALISGLCKESRLDEARQLYDVMIDNGLTPCEVTRVT 638
           IDLA+K+F  M  HGC PDS +YG+LISGLCK+S +DEA +LY+ MID GL+P EVTRVT
Sbjct: 554 IDLALKYFHNMKRHGCVPDSFTYGSLISGLCKKSMVDEACKLYEAMIDRGLSPPEVTRVT 613

Query: 639 LAYEYCKTEEFASAMVILERLDKKLWIRTVHTLIRKLCSEKKVGMAALFFHKLLDKEVNV 698
           LAYEYCK  + A+AM++LE LDKKLWIRTV TL+RKLCSEKKVG+AALFF KLL+K+ + 
Sbjct: 614 LAYEYCKRNDSANAMILLEPLDKKLWIRTVRTLVRKLCSEKKVGVAALFFQKLLEKDSSA 673

Query: 699 DRVSLAAFMTACCESNKYALVSDLTERISRGIG 731
           DRV+LAAF TAC ES K  LV+DLTERISRG+G
Sbjct: 674 DRVTLAAFTTACSESGKNNLVTDLTERISRGVG 701

BLAST of Cp4.1LG09g06800 vs. Swiss-Prot
Match: PP407_ARATH (Pentatricopeptide repeat-containing protein At5g39710 OS=Arabidopsis thaliana GN=EMB2745 PE=2 SV=1)

HSP 1 Score: 281.2 bits (718), Expect = 3.3e-74
Identity = 147/431 (34.11%), Postives = 248/431 (57.54%), Query Frame = 1

Query: 227 LEYAGNMFDEMSARGMAPNSCTYKSIIVGNCRYGNVLDVDRWLNEMME-RGFVVDNATLT 286
           + +A N+F EM    ++PN  TY  +I G C  GN+ DV   L + ME +G + +  T  
Sbjct: 186 ISFAENVFKEMLESQVSPNVFTYNILIRGFCFAGNI-DVALTLFDKMETKGCLPNVVTYN 245

Query: 287 LIINAFCKKSFVSRAFWLFHKVKKMGLSPNLINYSSMISGLCKRGSVKQAFELLEEMVRN 346
            +I+ +CK   +   F L   +   GL PNLI+Y+ +I+GLC+ G +K+   +L EM R 
Sbjct: 246 TLIDGYCKLRKIDDGFKLLRSMALKGLEPNLISYNVVINGLCREGRMKEVSFVLTEMNRR 305

Query: 347 GWKPNVYTHTSLIDGLCKKGWTDRAFRLFLKLVRSDIYKPNVYTYTAMISGYCKEEKLNR 406
           G+  +  T+ +LI G CK+G   +A  +  +++R  +  P+V TYT++I   CK   +NR
Sbjct: 306 GYSLDEVTYNTLIKGYCKEGNFHQALVMHAEMLRHGL-TPSVITYTSLIHSMCKAGNMNR 365

Query: 407 AEMLFERMKEQGMVPNTNTYTTLIDGHCKAGNFSRAYELMEVMCNEGFFPNICTYNAIVD 466
           A    ++M+ +G+ PN  TYTTL+DG  + G  + AY ++  M + GF P++ TYNA+++
Sbjct: 366 AMEFLDQMRVRGLCPNERTYTTLVDGFSQKGYMNEAYRVLREMNDNGFSPSVVTYNALIN 425

Query: 467 GLCKKGRVEEAFKLLNKGCRNRVEADAVTYNILISEQCKHADLNRALMFLTKMLKVGFQP 526
           G C  G++E+A  +L       +  D V+Y+ ++S  C+  D++ AL    +M++ G +P
Sbjct: 426 GHCVTGKMEDAIAVLEDMKEKGLSPDVVSYSTVLSGFCRSYDVDEALRVKREMVEKGIKP 485

Query: 527 DVHLYTTLISAFCRQKMMNDSEKLFDEVVKLGFVPTKETYTSMICGYCRERKIDLAVKFF 586
           D   Y++LI  FC Q+   ++  L++E++++G  P + TYT++I  YC E  ++ A++  
Sbjct: 486 DTITYSSLIQGFCEQRRTKEACDLYEEMLRVGLPPDEFTYTALINAYCMEGDLEKALQLH 545

Query: 587 QRMNVHGCAPDSISYGALISGLCKESRLDEARQLYDVMIDNGLTPCEVTRVTLAYEYCKT 646
             M   G  PD ++Y  LI+GL K+SR  EA++L   +      P +VT  TL  E C  
Sbjct: 546 NEMVEKGVLPDVVTYSVLINGLNKQSRTREAKRLLLKLFYEESVPSDVTYHTL-IENCSN 605

Query: 647 EEFASAMVILE 657
            EF S + +++
Sbjct: 606 IEFKSVVSLIK 613

BLAST of Cp4.1LG09g06800 vs. Swiss-Prot
Match: PP306_ARATH (Pentatricopeptide repeat-containing protein At4g11690 OS=Arabidopsis thaliana GN=At4g11690 PE=2 SV=1)

HSP 1 Score: 263.5 bits (672), Expect = 7.0e-69
Identity = 145/451 (32.15%), Postives = 235/451 (52.11%), Query Frame = 1

Query: 180 ECMIGVFAEIGKLKEAVDMIIDMRNQGLVLTTRVMNRIIMVAAEMGLLEYAGNMFDEMSA 239
           E +I  + +   L  ++    +M + G V  +   N ++             + F+E  +
Sbjct: 98  EVIINSYVQSQSLNLSISYFNEMVDNGFVPGSNCFNYLLTFVVGSSSFNQWWSFFNENKS 157

Query: 240 RGMAPNSCTYKSIIVGNCRYGNVLDVDRWLNEMMERGFVVDNATLTLIINAFCKKSFVSR 299
           + +  +  ++  +I G C  G +      L E+ E GF  +    T +I+  CKK  + +
Sbjct: 158 K-VVLDVYSFGILIKGCCEAGEIEKSFDLLIELTEFGFSPNVVIYTTLIDGCCKKGEIEK 217

Query: 300 AFWLFHKVKKMGLSPNLINYSSMISGLCKRGSVKQAFELLEEMVRNGWKPNVYTHTSLID 359
           A  LF ++ K+GL  N   Y+ +I+GL K G  KQ FE+ E+M  +G  PN+YT+  +++
Sbjct: 218 AKDLFFEMGKLGLVANERTYTVLINGLFKNGVKKQGFEMYEKMQEDGVFPNLYTYNCVMN 277

Query: 360 GLCKKGWTDRAFRLFLKLVRSDIYKPNVYTYTAMISGYCKEEKLNRAEMLFERMKEQGMV 419
            LCK G T  AF++F ++    +   N+ TY  +I G C+E KLN A  + ++MK  G+ 
Sbjct: 278 QLCKDGRTKDAFQVFDEMRERGV-SCNIVTYNTLIGGLCREMKLNEANKVVDQMKSDGIN 337

Query: 420 PNTNTYTTLIDGHCKAGNFSRAYELMEVMCNEGFFPNICTYNAIVDGLCKKGRVEEAFKL 479
           PN  TY TLIDG C  G   +A  L   + + G  P++ TYN +V G C+KG    A K+
Sbjct: 338 PNLITYNTLIDGFCGVGKLGKALSLCRDLKSRGLSPSLVTYNILVSGFCRKGDTSGAAKM 397

Query: 480 LNKGCRNRVEADAVTYNILISEQCKHADLNRALMFLTKMLKVGFQPDVHLYTTLISAFCR 539
           + +     ++   VTY ILI    +  ++ +A+     M ++G  PDVH Y+ LI  FC 
Sbjct: 398 VKEMEERGIKPSKVTYTILIDTFARSDNMEKAIQLRLSMEELGLVPDVHTYSVLIHGFCI 457

Query: 540 QKMMNDSEKLFDEVVKLGFVPTKETYTSMICGYCRERKIDLAVKFFQRMNVHGCAPDSIS 599
           +  MN++ +LF  +V+    P +  Y +MI GYC+E     A+K  + M     AP+  S
Sbjct: 458 KGQMNEASRLFKSMVEKNCEPNEVIYNTMILGYCKEGSSYRALKLLKEMEEKELAPNVAS 517

Query: 600 YGALISGLCKESRLDEARQLYDVMIDNGLTP 631
           Y  +I  LCKE +  EA +L + MID+G+ P
Sbjct: 518 YRYMIEVLCKERKSKEAERLVEKMIDSGIDP 546

BLAST of Cp4.1LG09g06800 vs. Swiss-Prot
Match: PPR12_ARATH (Pentatricopeptide repeat-containing protein At1g05670, mitochondrial OS=Arabidopsis thaliana GN=At1g05670 PE=2 SV=1)

HSP 1 Score: 261.5 bits (667), Expect = 2.7e-68
Identity = 142/471 (30.15%), Postives = 240/471 (50.96%), Query Frame = 1

Query: 191 KLKEAVDMIIDMRNQGLVLTTRVMNRIIMVAAEMGLLEYAGNMFDEMSARGMAPNSCTYK 250
           K   A+ +  +    G+       N +I    ++G ++ A ++   M  +G  P+  +Y 
Sbjct: 226 KTATAIIVFREFPEVGVCWNVASYNIVIHFVCQLGRIKEAHHLLLLMELKGYTPDVISYS 285

Query: 251 SIIVGNCRYGNVLDVDRWLNEMMERGFVVDNATLTLIINAFCKKSFVSRAFWLFHKVKKM 310
           +++ G CR+G +  V + +  M  +G   ++     II   C+   ++ A   F ++ + 
Sbjct: 286 TVVNGYCRFGELDKVWKLIEVMKRKGLKPNSYIYGSIIGLLCRICKLAEAEEAFSEMIRQ 345

Query: 311 GLSPNLINYSSMISGLCKRGSVKQAFELLEEMVRNGWKPNVYTHTSLIDGLCKKGWTDRA 370
           G+ P+ + Y+++I G CKRG ++ A +   EM      P+V T+T++I G C+ G    A
Sbjct: 346 GILPDTVVYTTLIDGFCKRGDIRAASKFFYEMHSRDITPDVLTYTAIISGFCQIGDMVEA 405

Query: 371 FRLFLKLVRSDIYKPNVYTYTAMISGYCKEEKLNRAEMLFERMKEQGMVPNTNTYTTLID 430
            +LF ++    + +P+  T+T +I+GYCK   +  A  +   M + G  PN  TYTTLID
Sbjct: 406 GKLFHEMFCKGL-EPDSVTFTELINGYCKAGHMKDAFRVHNHMIQAGCSPNVVTYTTLID 465

Query: 431 GHCKAGNFSRAYELMEVMCNEGFFPNICTYNAIVDGLCKKGRVEEAFKLLNKGCRNRVEA 490
           G CK G+   A EL+  M   G  PNI TYN+IV+GLCK G +EEA KL+ +     + A
Sbjct: 466 GLCKEGDLDSANELLHEMWKIGLQPNIFTYNSIVNGLCKSGNIEEAVKLVGEFEAAGLNA 525

Query: 491 DAVTYNILISEQCKHADLNRALMFLTKMLKVGFQPDVHLYTTLISAFCRQKMMNDSEKLF 550
           D VTY  L+   CK  ++++A   L +ML  G QP +  +  L++ FC   M+ D EKL 
Sbjct: 526 DTVTYTTLMDAYCKSGEMDKAQEILKEMLGKGLQPTIVTFNVLMNGFCLHGMLEDGEKLL 585

Query: 551 DEVVKLGFVPTKETYTSMICGYCRERKIDLAVKFFQRMNVHGCAPDSISYGALISGLCKE 610
           + ++  G  P   T+ S++  YC    +  A   ++ M   G  PD  +Y  L+ G CK 
Sbjct: 586 NWMLAKGIAPNATTFNSLVKQYCIRNNLKAATAIYKDMCSRGVGPDGKTYENLVKGHCKA 645

Query: 611 SRLDEARQLYDVMIDNGLTPCEVTRVTLAYEYCKTEEFASAMVILERLDKK 662
             + EA  L+  M   G +    T   L   + K ++F  A  + +++ ++
Sbjct: 646 RNMKEAWFLFQEMKGKGFSVSVSTYSVLIKGFLKRKKFLEAREVFDQMRRE 695

BLAST of Cp4.1LG09g06800 vs. Swiss-Prot
Match: PP360_ARATH (Pentatricopeptide repeat-containing protein At5g01110 OS=Arabidopsis thaliana GN=At5g01110 PE=2 SV=1)

HSP 1 Score: 257.3 bits (656), Expect = 5.0e-67
Identity = 146/553 (26.40%), Postives = 279/553 (50.45%), Query Frame = 1

Query: 176 DEVVECMIGVFAEIGKLKEAVDMIIDMRNQGLVLTTRVMNRIIMVAAEMGLLEYAGNMFD 235
           D V + +I  + +  KL+EA +    +R++G  ++    N +I     +G +E A  ++ 
Sbjct: 165 DSVFDLLIRTYVQARKLREAHEAFTLLRSKGFTVSIDACNALIGSLVRIGWVELAWGVYQ 224

Query: 236 EMSARGMAPNSCTYKSIIVGNCRYGNVLDVDRWLNEMMERGFVVDNATLTLIINAFCKKS 295
           E+S  G+  N  T   ++   C+ G +  V  +L+++ E+G   D  T   +I+A+  K 
Sbjct: 225 EISRSGVGINVYTLNIMVNALCKDGKMEKVGTFLSQVQEKGVYPDIVTYNTLISAYSSKG 284

Query: 296 FVSRAFWLFHKVKKMGLSPNLINYSSMISGLCKRGSVKQAFELLEEMVRNGWKPNVYTHT 355
            +  AF L + +   G SP +  Y+++I+GLCK G  ++A E+  EM+R+G  P+  T+ 
Sbjct: 285 LMEEAFELMNAMPGKGFSPGVYTYNTVINGLCKHGKYERAKEVFAEMLRSGLSPDSTTYR 344

Query: 356 SLIDGLCKKGWTDRAFRLFLKLVRSDIYKPNVYTYTAMISGYCKEEKLNRAEMLFERMKE 415
           SL+   CKKG      ++F  +   D+  P++  +++M+S + +   L++A M F  +KE
Sbjct: 345 SLLMEACKKGDVVETEKVFSDMRSRDVV-PDLVCFSSMMSLFTRSGNLDKALMYFNSVKE 404

Query: 416 QGMVPNTNTYTTLIDGHCKAGNFSRAYELMEVMCNEGFFPNICTYNAIVDGLCKKGRVEE 475
            G++P+   YT LI G+C+ G  S A  L   M  +G   ++ TYN I+ GLCK+  + E
Sbjct: 405 AGLIPDNVIYTILIQGYCRKGMISVAMNLRNEMLQQGCAMDVVTYNTILHGLCKRKMLGE 464

Query: 476 AFKLLNKGCRNRVEADAVTYNILISEQCKHADLNRALMFLTKMLKVGFQPDVHLYTTLIS 535
           A KL N+     +  D+ T  ILI   CK  +L  A+    KM +   + DV  Y TL+ 
Sbjct: 465 ADKLFNEMTERALFPDSYTLTILIDGHCKLGNLQNAMELFQKMKEKRIRLDVVTYNTLLD 524

Query: 536 AFCRQKMMNDSEKLFDEVVKLGFVPTKETYTSMICGYCRERKIDLAVKFFQRMNVHGCAP 595
            F +   ++ +++++ ++V    +PT  +Y+ ++   C +  +  A + +  M      P
Sbjct: 525 GFGKVGDIDTAKEIWADMVSKEILPTPISYSILVNALCSKGHLAEAFRVWDEMISKNIKP 584

Query: 596 DSISYGALISGLCKESRLDEARQLYDVMIDNGLTPCEVTRVTLAYEYCKTEEFASAMVIL 655
             +   ++I G C+     +     + MI  G  P  ++  TL Y + + E  + A  ++
Sbjct: 585 TVMICNSMIKGYCRSGNASDGESFLEKMISEGFVPDCISYNTLIYGFVREENMSKAFGLV 644

Query: 656 ERLDKKLW-----IRTVHTLIRKLCSEKKVGMAALFFHKLLDKEVNVDRVSLAAFMTACC 715
           ++++++       + T ++++   C + ++  A +   K++++ VN DR       T  C
Sbjct: 645 KKMEEEQGGLVPDVFTYNSILHGFCRQNQMKEAEVVLRKMIERGVNPDR------STYTC 704

Query: 716 ESNKYALVSDLTE 724
             N +    +LTE
Sbjct: 705 MINGFVSQDNLTE 710

BLAST of Cp4.1LG09g06800 vs. TrEMBL
Match: A0A0A0LYL9_CUCSA (Uncharacterized protein OS=Cucumis sativus GN=Csa_1G701980 PE=4 SV=1)

HSP 1 Score: 1230.7 bits (3183), Expect = 0.0e+00
Identity = 609/731 (83.31%), Postives = 662/731 (90.56%), Query Frame = 1

Query: 1   MNATSPRQFASHGGRAPATFMPSMQFLASLRILRLHGFLHKF-SFPQRLSVSASAGLFSS 60
           MN+T+PRQ A +GGR PA F+P MQFLASLRILR HGFL K  SF Q  S SAS   FSS
Sbjct: 1   MNSTNPRQLALNGGRGPAVFIPLMQFLASLRILRPHGFLQKLCSFQQGSSASASLAFFSS 60

Query: 61  SHFDSISSPHRDSSSSSSCSSLQSPVQTICSLVIESYFRQPHLRFSPLKLNLDMDADFLT 120
           +HFDSISSPH D SSSSS   LQSP++ ICSLV+++Y RQPHLRFSP KLNLDMDA  LT
Sbjct: 61  THFDSISSPHHDFSSSSS---LQSPLKKICSLVLDTYLRQPHLRFSPSKLNLDMDAASLT 120

Query: 121 HEQAISVVASLASEEGSMMALSFFYWAIGFPKFRYFMRLYIVCTMLLVGKCKQERADEVV 180
           HEQAIS VA LASEEGSM+ALSFFYWA+GFPKFRYFMRLYIVCTM LVGKC  ERA EVV
Sbjct: 121 HEQAISAVALLASEEGSMVALSFFYWAVGFPKFRYFMRLYIVCTMSLVGKCNLERAHEVV 180

Query: 181 ECMIGVFAEIGKLKEAVDMIIDMRNQGLVLTTRVMNRIIMVAAEMGLLEYAGNMFDEMSA 240
           ECM+GVFAEIGKLKEAVDMI+DMRNQGLVLTTRVMNRII+VAAEM L+EYAGN+FDEMSA
Sbjct: 181 ECMVGVFAEIGKLKEAVDMILDMRNQGLVLTTRVMNRIILVAAEMRLVEYAGNVFDEMSA 240

Query: 241 RGMAPNSCTYKSIIVGNCRYGNVLDVDRWLNEMMERGFVVDNATLTLIINAFCKKSFVSR 300
           RG+ P+SCTYK IIVG CR GNVL+ DRW+ EMMERGFVVDNATLTLII AFC+KS V+R
Sbjct: 241 RGVYPDSCTYKYIIVGYCRNGNVLEADRWICEMMERGFVVDNATLTLIITAFCEKSLVNR 300

Query: 301 AFWLFHKVKKMGLSPNLINYSSMISGLCKRGSVKQAFELLEEMVRNGWKPNVYTHTSLID 360
           A W FHKV KMGLSPNLINYSSMISGLCKRGSVKQAFELLEEMV+NGWKPNVYTHTSLI 
Sbjct: 301 AVWFFHKVTKMGLSPNLINYSSMISGLCKRGSVKQAFELLEEMVKNGWKPNVYTHTSLIH 360

Query: 361 GLCKKGWTDRAFRLFLKLVRSDIYKPNVYTYTAMISGYCKEEKLNRAEMLFERMKEQGMV 420
           GLCKKGWT+RAFRLFLKL+RSD YKPNV+TYTAMISGYCKEEKL+RAEMLFERMKEQG+V
Sbjct: 361 GLCKKGWTERAFRLFLKLIRSDNYKPNVHTYTAMISGYCKEEKLSRAEMLFERMKEQGLV 420

Query: 421 PNTNTYTTLIDGHCKAGNFSRAYELMEVMCNEGFFPNICTYNAIVDGLCKKGRVEEAFKL 480
           PNTNTYTTLIDGHCKAGNFS+AYELME+M NEGFFPN CTYN+IVDGLCK+GR EEAFKL
Sbjct: 421 PNTNTYTTLIDGHCKAGNFSKAYELMELMSNEGFFPNTCTYNSIVDGLCKRGRAEEAFKL 480

Query: 481 LNKGCRNRVEADAVTYNILISEQCKHADLNRALMFLTKMLKVGFQPDVHLYTTLISAFCR 540
           LN G +N++EAD VTY ILISEQCK AD+N+AL+FL KM KVGFQPD+HLYTTLI+AFCR
Sbjct: 481 LNTGFQNQIEADGVTYTILISEQCKRADMNQALVFLNKMFKVGFQPDIHLYTTLIAAFCR 540

Query: 541 QKMMNDSEKLFDEVVKLGFVPTKETYTSMICGYCRERKIDLAVKFFQRMNVHGCAPDSIS 600
           Q MM DSEKLFDEV+KLG  PTKETYTSMICGYCRE+K+ LAVKFFQ+M+ HGCAPDSIS
Sbjct: 541 QNMMKDSEKLFDEVIKLGLAPTKETYTSMICGYCREKKVSLAVKFFQKMSDHGCAPDSIS 600

Query: 601 YGALISGLCKESRLDEARQLYDVMIDNGLTPCEVTRVTLAYEYCKTEEFASAMVILERLD 660
           YGALISGLCKESRLDEARQLYD MID GL+PCEVTRVTL YEYCKTE+FASAMVILERL+
Sbjct: 601 YGALISGLCKESRLDEARQLYDTMIDKGLSPCEVTRVTLTYEYCKTEDFASAMVILERLN 660

Query: 661 KKLWIRTVHTLIRKLCSEKKVGMAALFFHKLLDKEVNVDRVSLAAFMTACCESNKYALVS 720
           KKLWIRTVHTLIRKLC EKKV +AALFFHKLLDKEVNVDRV+LAAF TAC ESNKYALVS
Sbjct: 661 KKLWIRTVHTLIRKLCCEKKVALAALFFHKLLDKEVNVDRVTLAAFNTACIESNKYALVS 720

Query: 721 DLTERISRGIG 731
           DL+ERIS+GIG
Sbjct: 721 DLSERISKGIG 728

BLAST of Cp4.1LG09g06800 vs. TrEMBL
Match: M5WK57_PRUPE (Uncharacterized protein (Fragment) OS=Prunus persica GN=PRUPE_ppa015022mg PE=4 SV=1)

HSP 1 Score: 928.7 bits (2399), Expect = 4.3e-267
Identity = 460/698 (65.90%), Postives = 556/698 (79.66%), Query Frame = 1

Query: 27  LASLRILR-LHGFLHKFSFPQRLSVSASAGLFSS-----SHFDSISSPHR-----DSSSS 86
           + SLRILR  H    K   P    +S    LFS      +H+D   S         ++S+
Sbjct: 1   MVSLRILRRTHELQQKLLSPASNPISIFYTLFSLRTLSYTHYDDPYSTTTITTATSTTST 60

Query: 87  SSCSSLQSPVQTICSLVIESYFRQPHLRFSPLKLNLDMDADFLTHEQAISVVASLASEEG 146
           SS S  QS V+TIC+LV +SY  Q HLR SP KLNLD++AD LT+EQAISVVASLA E G
Sbjct: 61  SSSSQSQSLVRTICALVCQSYSPQTHLRSSPPKLNLDLNADSLTNEQAISVVASLAEEAG 120

Query: 147 SMMALSFFYWAIGFPKFRYFMRLYIVCTMLLVGKCKQERADEVVECMIGVFAEIGKLKEA 206
           SM+ALSFFYWAIGFPKFRYFMRLYI C M L G    ERA EVV CM+  FAEIG+LKEA
Sbjct: 121 SMVALSFFYWAIGFPKFRYFMRLYIFCAMSLFGNGNLERAHEVVHCMVRNFAEIGRLKEA 180

Query: 207 VDMIIDMRNQGLVLTTRVMNRIIMVAAEMGLLEYAGNMFDEMSARGMAPNSCTYKSIIVG 266
            DM+ +M+NQGL+L+TR +N ++ +A ++GL+EYA N+F+EM  RG++P+S +YKS++VG
Sbjct: 181 ADMVFEMQNQGLMLSTRTLNCVLGIACDLGLVEYAENLFEEMCVRGVSPDSLSYKSMVVG 240

Query: 267 NCRYGNVLDVDRWLNEMMERGFVVDNATLTLIINAFCKKSFVSRAFWLFHKVKKMGLSPN 326
            CR   VL+VDRWL++M+ERGFV+DN T TLII+ FC+KS + R          MG+ PN
Sbjct: 241 YCRNRRVLEVDRWLSKMLERGFVLDNVTFTLIISLFCEKSLMIR----------MGVKPN 300

Query: 327 LINYSSMISGLCKRGSVKQAFELLEEMVRNGWKPNVYTHTSLIDGLCKKGWTDRAFRLFL 386
           LIN++S+I GLC+RGS+KQAFE+LEEMVR GWKPNVYTHT LIDGLCKKGWT+RAFRLFL
Sbjct: 301 LINFTSLIHGLCQRGSIKQAFEMLEEMVRKGWKPNVYTHTGLIDGLCKKGWTERAFRLFL 360

Query: 387 KLVRSDIYKPNVYTYTAMISGYCKEEKLNRAEMLFERMKEQGMVPNTNTYTTLIDGHCKA 446
           KLVRSD YKPNV+TYTAMI GYC+E+K++RAEML  RMKEQG++PNTNTYTTL+ GHCKA
Sbjct: 361 KLVRSDNYKPNVHTYTAMIRGYCEEDKMSRAEMLLSRMKEQGLIPNTNTYTTLVSGHCKA 420

Query: 447 GNFSRAYELMEVMCNEGFFPNICTYNAIVDGLCKKGRVEEAFKLLNKGCRNRVEADAVTY 506
           GNF RAYELM++M  EGF PNICTYNA+ D LCKKGRV+EA+KL+ KG R  +EAD VTY
Sbjct: 421 GNFDRAYELMDIMGKEGFAPNICTYNAVFDSLCKKGRVQEAYKLIKKGFRRGLEADRVTY 480

Query: 507 NILISEQCKHADLNRALMFLTKMLKVGFQPDVHLYTTLISAFCRQKMMNDSEKLFDEVVK 566
            I ISE CK  D+N AL+F  KMLKVG QPD+H YTTLI+AFCRQK M +SEK F+  V+
Sbjct: 481 TIFISEHCKRGDINGALVFFNKMLKVGLQPDMHSYTTLIAAFCRQKKMKESEKFFELSVR 540

Query: 567 LGFVPTKETYTSMICGYCRERKIDLAVKFFQRMNVHGCAPDSISYGALISGLCKESRLDE 626
           LG +PTKETYTSMICGYCR+  I LA+KFF RM  HGCAPDS +YGALISGLCKE +L+E
Sbjct: 541 LGSIPTKETYTSMICGYCRDENIALAIKFFHRMGDHGCAPDSFTYGALISGLCKEEKLEE 600

Query: 627 ARQLYDVMIDNGLTPCEVTRVTLAYEYCKTEEFASAMVILERLDKKLWIRTVHTLIRKLC 686
           AR+LYD M+D GL+PCEVTR+TLAY+YCK ++ A+AMV+LERL+KKLWIRTV+TL+RKLC
Sbjct: 601 ARRLYDTMMDKGLSPCEVTRLTLAYKYCKKDDSAAAMVLLERLEKKLWIRTVNTLVRKLC 660

Query: 687 SEKKVGMAALFFHKLLDKEVNVDRVSLAAFMTACCESN 714
           SEKKVG+A LFFHKL+DK+ NVDRV+LAAF TAC ESN
Sbjct: 661 SEKKVGIATLFFHKLVDKDQNVDRVTLAAFKTACYESN 688

BLAST of Cp4.1LG09g06800 vs. TrEMBL
Match: W9RA33_9ROSA (Uncharacterized protein OS=Morus notabilis GN=L484_008796 PE=4 SV=1)

HSP 1 Score: 927.9 bits (2397), Expect = 7.4e-267
Identity = 453/695 (65.18%), Postives = 558/695 (80.29%), Query Frame = 1

Query: 35  LHGFLHKFSFPQRLSVSASAGLFSSSHFDSISSPHRDSSSSSSCSSLQSPVQTICSLVIE 94
           L+  LH    P+  S ++     S+    S SS    SSSSSS SS QS ++T+CSLV E
Sbjct: 28  LYTSLHSLFSPKTFSSNSYHDYLSAGPSSSSSS----SSSSSSLSSSQSLIRTVCSLVFE 87

Query: 95  SYFRQPHLRFSPLKLNLDMDADFLTHEQAISVVASLASEEGSMMALSFFYWAIGFPKFRY 154
           SY++  H R SP KL L++D D LTHEQAI+VVASLA E GSM+ALSFFYWAI F KFR+
Sbjct: 88  SYYQHGHGRQSPPKLILNVDTDSLTHEQAITVVASLADEGGSMVALSFFYWAIEFSKFRH 147

Query: 155 FMRLYIVCTMLLVGKCKQERADEVVECMIGVFAEIGKLKEAVDMIIDMRNQGLVLTTRVM 214
           FMRLYIVC M L+G    ERA EV++CM+G FAEIG+LKEA DMI+D++NQGL+LTT ++
Sbjct: 148 FMRLYIVCAMSLIGNGNLERAHEVMQCMLGSFAEIGRLKEAGDMILDLQNQGLMLTTHIL 207

Query: 215 NRIIMVAAEMGLLEYAGNMFDEMSARGMAPNSCTYKSIIVGNCRYGNVLDVDRWLNEMME 274
           N ++ +A EM  +EYA  MF+EM  R ++P+  +YKS++VG CR G VL+ D+WL+EM++
Sbjct: 208 NSVVRIAWEMNSIEYAEEMFEEMCQREVSPDPSSYKSMVVGYCRIGRVLEADKWLSEMLD 267

Query: 275 RGFVVDNATLTLIINAFCKKSFVSRAFWLFHKVKKMGLSPNLINYSSMISGLCKRGSVKQ 334
           +GF VDNATLTLII+ FCKK F + A W F+K+  MGLSPNLINY+S+I+GLC+RGSVK+
Sbjct: 268 KGFAVDNATLTLIISTFCKKGFANHALWFFNKMIGMGLSPNLINYTSLINGLCRRGSVKK 327

Query: 335 AFELLEEMVRNGWKPNVYTHTSLIDGLCKKGWTDRAFRLFLKLVRSDIYKPNVYTYTAMI 394
            FE+LEEMV  GW+PNVYTHT+LIDGLCKKGWT++AFRLFLKLVRSD YKPNV+TYT+MI
Sbjct: 328 GFEMLEEMVSKGWRPNVYTHTALIDGLCKKGWTEKAFRLFLKLVRSDNYKPNVHTYTSMI 387

Query: 395 SGYCKEEKLNRAEMLFERMKEQGMVPNTNTYTTLIDGHCKAGNFSRAYELMEVMCNEGFF 454
           SGYC+EEK+NRAEMLF +MKEQG+VPNTNTYTTLIDGHCKAGNF  AY+LM+ M  +GF 
Sbjct: 388 SGYCREEKMNRAEMLFSKMKEQGLVPNTNTYTTLIDGHCKAGNFKTAYQLMDSMRVDGFA 447

Query: 455 PNICTYNAIVDGLCKKGRVEEAFKLLNKGCRNRVEADAVTYNILISEQCKHADL--NRAL 514
           PNI TYN ++DGL KKGR+ +A KL+ K   + V +D VTY ILISE CK  +     AL
Sbjct: 448 PNIYTYNVVMDGLLKKGRIPDAHKLMKKASWDGVRSDIVTYTILISEHCKKGETTDTGAL 507

Query: 515 MFLTKMLKVGFQPDVHLYTTLISAFCRQKMMNDSEKLFDEVVKLGFVPTKETYTSMICGY 574
           M   KM+KVG QPD+HLYT+LI+ FCRQK M +SE+ F++ ++ G  PTKETYTSMICGY
Sbjct: 508 MLFNKMVKVGIQPDIHLYTSLIAFFCRQKRMAESERFFEDAIRYGLEPTKETYTSMICGY 567

Query: 575 CRERKIDLAVKFFQRMNVHGCAPDSISYGALISGLCKESRLDEARQLYDVMIDNGLTPCE 634
           CR+  + +A KFF+RM  HGC PDSI+YGALISGLCK+ RLD+AR+LYD M+D GL+PCE
Sbjct: 568 CRDENVAMASKFFRRMTGHGCIPDSIAYGALISGLCKDERLDDARRLYDTMVDKGLSPCE 627

Query: 635 VTRVTLAYEYCKTEEFASAMVILERLDKKLWIRTVHTLIRKLCSEKKVGMAALFFHKLLD 694
           VTRVTLAYEYCK E F++AM ILERLDK+LWIRTV+TLIRKLC+ KKVGMAALFFH+L+ 
Sbjct: 628 VTRVTLAYEYCKKENFSAAMAILERLDKRLWIRTVNTLIRKLCNNKKVGMAALFFHELVG 687

Query: 695 KEVNVDRVSLAAFMTACCESNKYALVSDLTERISR 728
           K+ NVDRV+LAAF TAC ESNKYALVS+LTERI +
Sbjct: 688 KDRNVDRVTLAAFTTACYESNKYALVSELTERIGK 718

BLAST of Cp4.1LG09g06800 vs. TrEMBL
Match: F6HFS1_VITVI (Putative uncharacterized protein OS=Vitis vinifera GN=VIT_01s0011g01910 PE=4 SV=1)

HSP 1 Score: 926.0 bits (2392), Expect = 2.8e-266
Identity = 458/709 (64.60%), Postives = 570/709 (80.39%), Query Frame = 1

Query: 32  ILRLHGFLHKFS-FPQRLSVSA--SAGLFSSSHFDSISSPH-------RDSSSSSSCSSL 91
           +LRL   LH+F   PQ+L  S+  S+   S  H      PH         SSSS S S  
Sbjct: 2   VLRL--LLHRFHVLPQKLPASSILSSVFLSQLHPTFSLRPHCYIHDEPSTSSSSQSQSHS 61

Query: 92  QSPVQTICSLVIESYFRQPHLRFSPLKLNLDMDADFLTHEQAISVVASLASEEGSMMALS 151
           QS V+TICSLV +SY++Q H+RF+P KL+L +D++ LTH+QAI+VVASLA E GSM+ALS
Sbjct: 62  QSVVRTICSLVCQSYYQQTHVRFTPPKLHLPLDSESLTHDQAITVVASLADEAGSMVALS 121

Query: 152 FFYWAIGFPKFRYFMRLYIVCTMLLVGKCKQERADEVVECMIGVFAEIGKLKEAVDMIID 211
           F YWAIGFPKFR+FMRLYIV    L+G    ERA+EV++CM+  FAE GKLKEAV+M+++
Sbjct: 122 FLYWAIGFPKFRHFMRLYIVSATALIGNKNLERANEVMQCMVMNFAENGKLKEAVNMVVE 181

Query: 212 MRNQGLVLTTRVMNRIIMVAAEMGLLEYAGNMFDEMSARGMAPNSCTYKSIIVGNCRYGN 271
           M+NQGLV +T+ +N ++ VA  MGL+E A NMF EM  RG++P+  ++K ++V  C  G 
Sbjct: 182 MQNQGLVPSTQTLNCVLDVAVGMGLVEIAENMFVEMCQRGVSPDCVSFKLMVVACCNMGR 241

Query: 272 VLDVDRWLNEMMERGFVVDNATLTLIINAFCKKSFVSRAFWLFHKVKKMGLSPNLINYSS 331
           VL+ +RWLN M+ERGF+VDNAT TLII+AFC+K +V+R    F K+ +MGL+PN+IN+++
Sbjct: 242 VLEAERWLNAMVERGFIVDNATCTLIIDAFCQKGYVNRVVGYFWKMVEMGLAPNVINFTA 301

Query: 332 MISGLCKRGSVKQAFELLEEMVRNGWKPNVYTHTSLIDGLCKKGWTDRAFRLFLKLVRSD 391
           +I+GLCK+GS+KQAFELLEEMVR GWKPNVYTHT+LIDGLCKKGWT++AFRLFLKLVRSD
Sbjct: 302 LINGLCKQGSIKQAFELLEEMVRRGWKPNVYTHTTLIDGLCKKGWTEKAFRLFLKLVRSD 361

Query: 392 IYKPNVYTYTAMISGYCKEEKLNRAEMLFERMKEQGMVPNTNTYTTLIDGHCKAGNFSRA 451
            YKPNV+TYTAMI+GYCKE+KLNRAEML  RM+EQG+VPNTNTYTTLIDGHCK GNF RA
Sbjct: 362 GYKPNVHTYTAMINGYCKEDKLNRAEMLLSRMQEQGLVPNTNTYTTLIDGHCKVGNFVRA 421

Query: 452 YELMEVMCNEGFFPNICTYNAIVDGLCKKGRVEEAFKLLNKGCRNRVEADAVTYNILISE 511
           YELM++M  EGF PNI TYNAI+DGLCKKG ++EA++LLNK   + ++AD VTY IL+S 
Sbjct: 422 YELMDLMGKEGFSPNIYTYNAIIDGLCKKGSLDEAYRLLNKVSVHGLQADGVTYTILMSV 481

Query: 512 QCKHADLNRALMFLTKMLKVGFQPDVHLYTTLISAFCRQKMMNDSEKLFDEVVKLGFVPT 571
            C+ AD NR+L+F  KMLKVGF PD+H YTTLIS FCRQK M +SE+LF+E V LG +PT
Sbjct: 482 HCRQADTNRSLVFFNKMLKVGFTPDIHSYTTLISTFCRQKQMKESERLFEEAVSLGLIPT 541

Query: 572 KETYTSMICGYCRERKIDLAVKFFQRMNVHGCAPDSISYGALISGLCKESRLDEARQLYD 631
           K+TYTSMICGYCR     LAVK FQRM+ HGCAPDSI+YGALISGLCKES+LD+AR LYD
Sbjct: 542 KKTYTSMICGYCRYGNTSLAVKLFQRMSNHGCAPDSITYGALISGLCKESKLDDARNLYD 601

Query: 632 VMIDNGLTPCEVTRVTLAYEYCKTEEFASAMVILERLDKKLWIRTVHTLIRKLCSEKKVG 691
            M+D GL+PCEVTR+TLAYEYCK ++ ++A+ +L+RL+K+ WIRTV+TL+RKLCSE K+ 
Sbjct: 602 AMMDKGLSPCEVTRLTLAYEYCKKDDSSTAINVLDRLEKRQWIRTVNTLVRKLCSEGKLD 661

Query: 692 MAALFFHKLLDKEVNVDRVSLAAFMTACCESNKYALVSDLTERISRGIG 731
           MAALFFHKLLDKE NV+RV+L  FM  C ESNKY LVS+L+ERI  GIG
Sbjct: 662 MAALFFHKLLDKEPNVNRVTLLGFMNKCYESNKYGLVSELSERICEGIG 708

BLAST of Cp4.1LG09g06800 vs. TrEMBL
Match: A5BPH2_VITVI (Putative uncharacterized protein OS=Vitis vinifera GN=VITISV_008458 PE=4 SV=1)

HSP 1 Score: 922.9 bits (2384), Expect = 2.4e-265
Identity = 456/709 (64.32%), Postives = 569/709 (80.25%), Query Frame = 1

Query: 32  ILRLHGFLHKFS-FPQRLSVSA--SAGLFSSSHFDSISSPH-------RDSSSSSSCSSL 91
           +LRL   LH+F   P +L  S+  S+   S  H      PH         SSSS S S  
Sbjct: 2   VLRL--LLHRFHVLPXKLPASSILSSVFLSQLHPTFSLRPHCYIHDEPSTSSSSQSQSHS 61

Query: 92  QSPVQTICSLVIESYFRQPHLRFSPLKLNLDMDADFLTHEQAISVVASLASEEGSMMALS 151
           QS V+TICSLV +SY++Q H+RF+P KL+L +D++ LTH+QAI+VVASLA E GSM+ALS
Sbjct: 62  QSVVRTICSLVCQSYYQQTHVRFTPPKLHLPLDSESLTHDQAITVVASLADEAGSMVALS 121

Query: 152 FFYWAIGFPKFRYFMRLYIVCTMLLVGKCKQERADEVVECMIGVFAEIGKLKEAVDMIID 211
           F YWAIGFPKFR+FMRLYIV    L+G    ERA+EV++CM+  FAE GKLKEAV+M+++
Sbjct: 122 FLYWAIGFPKFRHFMRLYIVSATALIGNKNLERANEVMQCMVMNFAENGKLKEAVNMVVE 181

Query: 212 MRNQGLVLTTRVMNRIIMVAAEMGLLEYAGNMFDEMSARGMAPNSCTYKSIIVGNCRYGN 271
           M+NQGLV +T+ +N ++ VA  MGL+E A NMF EM  RG++P+  ++K ++V  C  G 
Sbjct: 182 MQNQGLVXSTQTLNCVLDVAVGMGLVEIAENMFVEMCQRGVSPDCVSFKLMVVACCNMGR 241

Query: 272 VLDVDRWLNEMMERGFVVDNATLTLIINAFCKKSFVSRAFWLFHKVKKMGLSPNLINYSS 331
           VL+ ++WLN M+ERGF+VDNAT TLII+AFC+K +V+R    F K+ +MGL+PN+IN+++
Sbjct: 242 VLEAEKWLNAMVERGFIVDNATCTLIIDAFCQKGYVNRVVGYFWKMVEMGLAPNVINFTA 301

Query: 332 MISGLCKRGSVKQAFELLEEMVRNGWKPNVYTHTSLIDGLCKKGWTDRAFRLFLKLVRSD 391
           +I+GLCK+GS+KQAFELLEEMVR GWKPNVYTHT+LIDGLCKKGWT++AFRLFLKLVRSD
Sbjct: 302 LINGLCKQGSIKQAFELLEEMVRRGWKPNVYTHTTLIDGLCKKGWTEKAFRLFLKLVRSD 361

Query: 392 IYKPNVYTYTAMISGYCKEEKLNRAEMLFERMKEQGMVPNTNTYTTLIDGHCKAGNFSRA 451
            YKPNV+TYTAMI+GYCKE+KLNRAEML  RM+EQG+VPNTNTYTTLIDGHCK GNF RA
Sbjct: 362 GYKPNVHTYTAMINGYCKEDKLNRAEMLLSRMQEQGLVPNTNTYTTLIDGHCKVGNFVRA 421

Query: 452 YELMEVMCNEGFFPNICTYNAIVDGLCKKGRVEEAFKLLNKGCRNRVEADAVTYNILISE 511
           YELM++M  EGF PNI TYNAI+DGLCKKG ++EA++LLNK   + ++AD VTY IL+S 
Sbjct: 422 YELMDLMGKEGFSPNIYTYNAIIDGLCKKGSLDEAYRLLNKVSVHGLQADGVTYTILMSV 481

Query: 512 QCKHADLNRALMFLTKMLKVGFQPDVHLYTTLISAFCRQKMMNDSEKLFDEVVKLGFVPT 571
            C+ AD NR+L+F  KMLKVGF PD+H YTTLIS FCRQK M +SE+LF+E V LG +PT
Sbjct: 482 HCRQADTNRSLVFFNKMLKVGFTPDIHSYTTLISXFCRQKQMKESERLFEEAVSLGLIPT 541

Query: 572 KETYTSMICGYCRERKIDLAVKFFQRMNVHGCAPDSISYGALISGLCKESRLDEARQLYD 631
           K+TYTSMICGYCR     LAVK FQRM+ HGCAPDSI+YGALISGLCKES+LD+AR LYD
Sbjct: 542 KKTYTSMICGYCRYGNTSLAVKLFQRMSNHGCAPDSITYGALISGLCKESKLDDARNLYD 601

Query: 632 VMIDNGLTPCEVTRVTLAYEYCKTEEFASAMVILERLDKKLWIRTVHTLIRKLCSEKKVG 691
            M+D GL+PCEVTR+TLAYEYCK ++ ++A+ +L+RL+K+ WIRTV+TL+RKLCSE K+ 
Sbjct: 602 AMMDKGLSPCEVTRLTLAYEYCKKDDSSTAINVLDRLEKRQWIRTVNTLVRKLCSEGKLD 661

Query: 692 MAALFFHKLLDKEVNVDRVSLAAFMTACCESNKYALVSDLTERISRGIG 731
           MAALFFHKLLDKE NV+RV+L  FM  C ESNKY LVS+L+ERI  GIG
Sbjct: 662 MAALFFHKLLDKEPNVNRVTLLGFMNKCYESNKYGLVSELSERICEGIG 708

BLAST of Cp4.1LG09g06800 vs. TAIR10
Match: AT4G19890.1 (AT4G19890.1 Pentatricopeptide repeat (PPR-like) superfamily protein)

HSP 1 Score: 875.2 bits (2260), Expect = 2.9e-254
Identity = 432/693 (62.34%), Postives = 532/693 (76.77%), Query Frame = 1

Query: 39  LHKFSFPQRLSVSASAGLFSSSHFDS-ISSPHRDSSSSSSCSSLQSPVQTICSLVIESYF 98
           L  F  P  L       L SS H  S +S P   SSS S C      V+++CSLV  SY 
Sbjct: 14  LRTFEIPNSLCSLFFFRLISSDHESSDLSLPSSPSSSPSQCL-----VKSVCSLVCTSYL 73

Query: 99  RQPHLRFSPLKLNLDMDADFLTHEQAISVVASLASEEGSMMALSFFYWAIGFPKFRYFMR 158
           RQ H+  SP ++NLD DA+ LTHEQAI+VVASLASE GSM+AL FFYWA+GF KFR+FMR
Sbjct: 74  RQNHVVSSPHRVNLDFDANSLTHEQAITVVASLASESGSMVALCFFYWAVGFEKFRHFMR 133

Query: 159 LYIVCTMLLVGKCKQERADEVVECMIGVFAEIGKLKEAVDMIIDMRNQGLVLTTRVMNRI 218
           LY+V    L+     ++A EV+ CM+  F+EIG+L EAV M++DM+NQGL  ++  MN +
Sbjct: 134 LYLVTADSLLANGNLQKAHEVMRCMLRNFSEIGRLNEAVGMVMDMQNQGLTPSSITMNCV 193

Query: 219 IMVAAEMGLLEYAGNMFDEMSARGMAPNSCTYKSIIVGNCRYGNVLDVDRWLNEMMERGF 278
           + +A E+GL+EYA N+FDEMS RG+ P+S +YK +++G  R G + + DRWL  M++RGF
Sbjct: 194 LEIAVELGLIEYAENVFDEMSVRGVVPDSSSYKLMVIGCFRDGKIQEADRWLTGMIQRGF 253

Query: 279 VVDNATLTLIINAFCKKSFVSRAFWLFHKVKKMGLSPNLINYSSMISGLCKRGSVKQAFE 338
           + DNAT TLI+ A C+   V+RA W F K+  +G  PNLIN++S+I GLCK+GS+KQAFE
Sbjct: 254 IPDNATCTLILTALCENGLVNRAIWYFRKMIDLGFKPNLINFTSLIDGLCKKGSIKQAFE 313

Query: 339 LLEEMVRNGWKPNVYTHTSLIDGLCKKGWTDRAFRLFLKLVRSDIYKPNVYTYTAMISGY 398
           +LEEMVRNGWKPNVYTHT+LIDGLCK+GWT++AFRLFLKLVRSD YKPNV+TYT+MI GY
Sbjct: 314 MLEEMVRNGWKPNVYTHTALIDGLCKRGWTEKAFRLFLKLVRSDTYKPNVHTYTSMIGGY 373

Query: 399 CKEEKLNRAEMLFERMKEQGMVPNTNTYTTLIDGHCKAGNFSRAYELMEVMCNEGFFPNI 458
           CKE+KLNRAEMLF RMKEQG+ PN NTYTTLI+GHCKAG+F RAYELM +M +EGF PNI
Sbjct: 374 CKEDKLNRAEMLFSRMKEQGLFPNVNTYTTLINGHCKAGSFGRAYELMNLMGDEGFMPNI 433

Query: 459 CTYNAIVDGLCKKGRVEEAFKLLNKGCRNRVEADAVTYNILISEQCKHADLNRALMFLTK 518
            TYNA +D LCKK R  EA++LLNK     +EAD VTY ILI EQCK  D+N+AL F  +
Sbjct: 434 YTYNAAIDSLCKKSRAPEAYELLNKAFSCGLEADGVTYTILIQEQCKQNDINQALAFFCR 493

Query: 519 MLKVGFQPDVHLYTTLISAFCRQKMMNDSEKLFDEVVKLGFVPTKETYTSMICGYCRERK 578
           M K GF+ D+ L   LI+AFCRQK M +SE+LF  VV LG +PTKETYTSMI  YC+E  
Sbjct: 494 MNKTGFEADMRLNNILIAAFCRQKKMKESERLFQLVVSLGLIPTKETYTSMISCYCKEGD 553

Query: 579 IDLAVKFFQRMNVHGCAPDSISYGALISGLCKESRLDEARQLYDVMIDNGLTPCEVTRVT 638
           IDLA+K+F  M  HGC PDS +YG+LISGLCK+S +DEA +LY+ MID GL+P EVTRVT
Sbjct: 554 IDLALKYFHNMKRHGCVPDSFTYGSLISGLCKKSMVDEACKLYEAMIDRGLSPPEVTRVT 613

Query: 639 LAYEYCKTEEFASAMVILERLDKKLWIRTVHTLIRKLCSEKKVGMAALFFHKLLDKEVNV 698
           LAYEYCK  + A+AM++LE LDKKLWIRTV TL+RKLCSEKKVG+AALFF KLL+K+ + 
Sbjct: 614 LAYEYCKRNDSANAMILLEPLDKKLWIRTVRTLVRKLCSEKKVGVAALFFQKLLEKDSSA 673

Query: 699 DRVSLAAFMTACCESNKYALVSDLTERISRGIG 731
           DRV+LAAF TAC ES K  LV+DLTERISRG+G
Sbjct: 674 DRVTLAAFTTACSESGKNNLVTDLTERISRGVG 701

BLAST of Cp4.1LG09g06800 vs. TAIR10
Match: AT5G39710.1 (AT5G39710.1 Tetratricopeptide repeat (TPR)-like superfamily protein)

HSP 1 Score: 281.2 bits (718), Expect = 1.8e-75
Identity = 147/431 (34.11%), Postives = 248/431 (57.54%), Query Frame = 1

Query: 227 LEYAGNMFDEMSARGMAPNSCTYKSIIVGNCRYGNVLDVDRWLNEMME-RGFVVDNATLT 286
           + +A N+F EM    ++PN  TY  +I G C  GN+ DV   L + ME +G + +  T  
Sbjct: 186 ISFAENVFKEMLESQVSPNVFTYNILIRGFCFAGNI-DVALTLFDKMETKGCLPNVVTYN 245

Query: 287 LIINAFCKKSFVSRAFWLFHKVKKMGLSPNLINYSSMISGLCKRGSVKQAFELLEEMVRN 346
            +I+ +CK   +   F L   +   GL PNLI+Y+ +I+GLC+ G +K+   +L EM R 
Sbjct: 246 TLIDGYCKLRKIDDGFKLLRSMALKGLEPNLISYNVVINGLCREGRMKEVSFVLTEMNRR 305

Query: 347 GWKPNVYTHTSLIDGLCKKGWTDRAFRLFLKLVRSDIYKPNVYTYTAMISGYCKEEKLNR 406
           G+  +  T+ +LI G CK+G   +A  +  +++R  +  P+V TYT++I   CK   +NR
Sbjct: 306 GYSLDEVTYNTLIKGYCKEGNFHQALVMHAEMLRHGL-TPSVITYTSLIHSMCKAGNMNR 365

Query: 407 AEMLFERMKEQGMVPNTNTYTTLIDGHCKAGNFSRAYELMEVMCNEGFFPNICTYNAIVD 466
           A    ++M+ +G+ PN  TYTTL+DG  + G  + AY ++  M + GF P++ TYNA+++
Sbjct: 366 AMEFLDQMRVRGLCPNERTYTTLVDGFSQKGYMNEAYRVLREMNDNGFSPSVVTYNALIN 425

Query: 467 GLCKKGRVEEAFKLLNKGCRNRVEADAVTYNILISEQCKHADLNRALMFLTKMLKVGFQP 526
           G C  G++E+A  +L       +  D V+Y+ ++S  C+  D++ AL    +M++ G +P
Sbjct: 426 GHCVTGKMEDAIAVLEDMKEKGLSPDVVSYSTVLSGFCRSYDVDEALRVKREMVEKGIKP 485

Query: 527 DVHLYTTLISAFCRQKMMNDSEKLFDEVVKLGFVPTKETYTSMICGYCRERKIDLAVKFF 586
           D   Y++LI  FC Q+   ++  L++E++++G  P + TYT++I  YC E  ++ A++  
Sbjct: 486 DTITYSSLIQGFCEQRRTKEACDLYEEMLRVGLPPDEFTYTALINAYCMEGDLEKALQLH 545

Query: 587 QRMNVHGCAPDSISYGALISGLCKESRLDEARQLYDVMIDNGLTPCEVTRVTLAYEYCKT 646
             M   G  PD ++Y  LI+GL K+SR  EA++L   +      P +VT  TL  E C  
Sbjct: 546 NEMVEKGVLPDVVTYSVLINGLNKQSRTREAKRLLLKLFYEESVPSDVTYHTL-IENCSN 605

Query: 647 EEFASAMVILE 657
            EF S + +++
Sbjct: 606 IEFKSVVSLIK 613

BLAST of Cp4.1LG09g06800 vs. TAIR10
Match: AT4G11690.1 (AT4G11690.1 Pentatricopeptide repeat (PPR-like) superfamily protein)

HSP 1 Score: 263.5 bits (672), Expect = 4.0e-70
Identity = 145/451 (32.15%), Postives = 235/451 (52.11%), Query Frame = 1

Query: 180 ECMIGVFAEIGKLKEAVDMIIDMRNQGLVLTTRVMNRIIMVAAEMGLLEYAGNMFDEMSA 239
           E +I  + +   L  ++    +M + G V  +   N ++             + F+E  +
Sbjct: 98  EVIINSYVQSQSLNLSISYFNEMVDNGFVPGSNCFNYLLTFVVGSSSFNQWWSFFNENKS 157

Query: 240 RGMAPNSCTYKSIIVGNCRYGNVLDVDRWLNEMMERGFVVDNATLTLIINAFCKKSFVSR 299
           + +  +  ++  +I G C  G +      L E+ E GF  +    T +I+  CKK  + +
Sbjct: 158 K-VVLDVYSFGILIKGCCEAGEIEKSFDLLIELTEFGFSPNVVIYTTLIDGCCKKGEIEK 217

Query: 300 AFWLFHKVKKMGLSPNLINYSSMISGLCKRGSVKQAFELLEEMVRNGWKPNVYTHTSLID 359
           A  LF ++ K+GL  N   Y+ +I+GL K G  KQ FE+ E+M  +G  PN+YT+  +++
Sbjct: 218 AKDLFFEMGKLGLVANERTYTVLINGLFKNGVKKQGFEMYEKMQEDGVFPNLYTYNCVMN 277

Query: 360 GLCKKGWTDRAFRLFLKLVRSDIYKPNVYTYTAMISGYCKEEKLNRAEMLFERMKEQGMV 419
            LCK G T  AF++F ++    +   N+ TY  +I G C+E KLN A  + ++MK  G+ 
Sbjct: 278 QLCKDGRTKDAFQVFDEMRERGV-SCNIVTYNTLIGGLCREMKLNEANKVVDQMKSDGIN 337

Query: 420 PNTNTYTTLIDGHCKAGNFSRAYELMEVMCNEGFFPNICTYNAIVDGLCKKGRVEEAFKL 479
           PN  TY TLIDG C  G   +A  L   + + G  P++ TYN +V G C+KG    A K+
Sbjct: 338 PNLITYNTLIDGFCGVGKLGKALSLCRDLKSRGLSPSLVTYNILVSGFCRKGDTSGAAKM 397

Query: 480 LNKGCRNRVEADAVTYNILISEQCKHADLNRALMFLTKMLKVGFQPDVHLYTTLISAFCR 539
           + +     ++   VTY ILI    +  ++ +A+     M ++G  PDVH Y+ LI  FC 
Sbjct: 398 VKEMEERGIKPSKVTYTILIDTFARSDNMEKAIQLRLSMEELGLVPDVHTYSVLIHGFCI 457

Query: 540 QKMMNDSEKLFDEVVKLGFVPTKETYTSMICGYCRERKIDLAVKFFQRMNVHGCAPDSIS 599
           +  MN++ +LF  +V+    P +  Y +MI GYC+E     A+K  + M     AP+  S
Sbjct: 458 KGQMNEASRLFKSMVEKNCEPNEVIYNTMILGYCKEGSSYRALKLLKEMEEKELAPNVAS 517

Query: 600 YGALISGLCKESRLDEARQLYDVMIDNGLTP 631
           Y  +I  LCKE +  EA +L + MID+G+ P
Sbjct: 518 YRYMIEVLCKERKSKEAERLVEKMIDSGIDP 546

BLAST of Cp4.1LG09g06800 vs. TAIR10
Match: AT1G05670.1 (AT1G05670.1 Pentatricopeptide repeat (PPR-like) superfamily protein)

HSP 1 Score: 261.5 bits (667), Expect = 1.5e-69
Identity = 142/471 (30.15%), Postives = 240/471 (50.96%), Query Frame = 1

Query: 191 KLKEAVDMIIDMRNQGLVLTTRVMNRIIMVAAEMGLLEYAGNMFDEMSARGMAPNSCTYK 250
           K   A+ +  +    G+       N +I    ++G ++ A ++   M  +G  P+  +Y 
Sbjct: 226 KTATAIIVFREFPEVGVCWNVASYNIVIHFVCQLGRIKEAHHLLLLMELKGYTPDVISYS 285

Query: 251 SIIVGNCRYGNVLDVDRWLNEMMERGFVVDNATLTLIINAFCKKSFVSRAFWLFHKVKKM 310
           +++ G CR+G +  V + +  M  +G   ++     II   C+   ++ A   F ++ + 
Sbjct: 286 TVVNGYCRFGELDKVWKLIEVMKRKGLKPNSYIYGSIIGLLCRICKLAEAEEAFSEMIRQ 345

Query: 311 GLSPNLINYSSMISGLCKRGSVKQAFELLEEMVRNGWKPNVYTHTSLIDGLCKKGWTDRA 370
           G+ P+ + Y+++I G CKRG ++ A +   EM      P+V T+T++I G C+ G    A
Sbjct: 346 GILPDTVVYTTLIDGFCKRGDIRAASKFFYEMHSRDITPDVLTYTAIISGFCQIGDMVEA 405

Query: 371 FRLFLKLVRSDIYKPNVYTYTAMISGYCKEEKLNRAEMLFERMKEQGMVPNTNTYTTLID 430
            +LF ++    + +P+  T+T +I+GYCK   +  A  +   M + G  PN  TYTTLID
Sbjct: 406 GKLFHEMFCKGL-EPDSVTFTELINGYCKAGHMKDAFRVHNHMIQAGCSPNVVTYTTLID 465

Query: 431 GHCKAGNFSRAYELMEVMCNEGFFPNICTYNAIVDGLCKKGRVEEAFKLLNKGCRNRVEA 490
           G CK G+   A EL+  M   G  PNI TYN+IV+GLCK G +EEA KL+ +     + A
Sbjct: 466 GLCKEGDLDSANELLHEMWKIGLQPNIFTYNSIVNGLCKSGNIEEAVKLVGEFEAAGLNA 525

Query: 491 DAVTYNILISEQCKHADLNRALMFLTKMLKVGFQPDVHLYTTLISAFCRQKMMNDSEKLF 550
           D VTY  L+   CK  ++++A   L +ML  G QP +  +  L++ FC   M+ D EKL 
Sbjct: 526 DTVTYTTLMDAYCKSGEMDKAQEILKEMLGKGLQPTIVTFNVLMNGFCLHGMLEDGEKLL 585

Query: 551 DEVVKLGFVPTKETYTSMICGYCRERKIDLAVKFFQRMNVHGCAPDSISYGALISGLCKE 610
           + ++  G  P   T+ S++  YC    +  A   ++ M   G  PD  +Y  L+ G CK 
Sbjct: 586 NWMLAKGIAPNATTFNSLVKQYCIRNNLKAATAIYKDMCSRGVGPDGKTYENLVKGHCKA 645

Query: 611 SRLDEARQLYDVMIDNGLTPCEVTRVTLAYEYCKTEEFASAMVILERLDKK 662
             + EA  L+  M   G +    T   L   + K ++F  A  + +++ ++
Sbjct: 646 RNMKEAWFLFQEMKGKGFSVSVSTYSVLIKGFLKRKKFLEAREVFDQMRRE 695

BLAST of Cp4.1LG09g06800 vs. TAIR10
Match: AT5G01110.1 (AT5G01110.1 Tetratricopeptide repeat (TPR)-like superfamily protein)

HSP 1 Score: 257.3 bits (656), Expect = 2.8e-68
Identity = 146/553 (26.40%), Postives = 279/553 (50.45%), Query Frame = 1

Query: 176 DEVVECMIGVFAEIGKLKEAVDMIIDMRNQGLVLTTRVMNRIIMVAAEMGLLEYAGNMFD 235
           D V + +I  + +  KL+EA +    +R++G  ++    N +I     +G +E A  ++ 
Sbjct: 165 DSVFDLLIRTYVQARKLREAHEAFTLLRSKGFTVSIDACNALIGSLVRIGWVELAWGVYQ 224

Query: 236 EMSARGMAPNSCTYKSIIVGNCRYGNVLDVDRWLNEMMERGFVVDNATLTLIINAFCKKS 295
           E+S  G+  N  T   ++   C+ G +  V  +L+++ E+G   D  T   +I+A+  K 
Sbjct: 225 EISRSGVGINVYTLNIMVNALCKDGKMEKVGTFLSQVQEKGVYPDIVTYNTLISAYSSKG 284

Query: 296 FVSRAFWLFHKVKKMGLSPNLINYSSMISGLCKRGSVKQAFELLEEMVRNGWKPNVYTHT 355
            +  AF L + +   G SP +  Y+++I+GLCK G  ++A E+  EM+R+G  P+  T+ 
Sbjct: 285 LMEEAFELMNAMPGKGFSPGVYTYNTVINGLCKHGKYERAKEVFAEMLRSGLSPDSTTYR 344

Query: 356 SLIDGLCKKGWTDRAFRLFLKLVRSDIYKPNVYTYTAMISGYCKEEKLNRAEMLFERMKE 415
           SL+   CKKG      ++F  +   D+  P++  +++M+S + +   L++A M F  +KE
Sbjct: 345 SLLMEACKKGDVVETEKVFSDMRSRDVV-PDLVCFSSMMSLFTRSGNLDKALMYFNSVKE 404

Query: 416 QGMVPNTNTYTTLIDGHCKAGNFSRAYELMEVMCNEGFFPNICTYNAIVDGLCKKGRVEE 475
            G++P+   YT LI G+C+ G  S A  L   M  +G   ++ TYN I+ GLCK+  + E
Sbjct: 405 AGLIPDNVIYTILIQGYCRKGMISVAMNLRNEMLQQGCAMDVVTYNTILHGLCKRKMLGE 464

Query: 476 AFKLLNKGCRNRVEADAVTYNILISEQCKHADLNRALMFLTKMLKVGFQPDVHLYTTLIS 535
           A KL N+     +  D+ T  ILI   CK  +L  A+    KM +   + DV  Y TL+ 
Sbjct: 465 ADKLFNEMTERALFPDSYTLTILIDGHCKLGNLQNAMELFQKMKEKRIRLDVVTYNTLLD 524

Query: 536 AFCRQKMMNDSEKLFDEVVKLGFVPTKETYTSMICGYCRERKIDLAVKFFQRMNVHGCAP 595
            F +   ++ +++++ ++V    +PT  +Y+ ++   C +  +  A + +  M      P
Sbjct: 525 GFGKVGDIDTAKEIWADMVSKEILPTPISYSILVNALCSKGHLAEAFRVWDEMISKNIKP 584

Query: 596 DSISYGALISGLCKESRLDEARQLYDVMIDNGLTPCEVTRVTLAYEYCKTEEFASAMVIL 655
             +   ++I G C+     +     + MI  G  P  ++  TL Y + + E  + A  ++
Sbjct: 585 TVMICNSMIKGYCRSGNASDGESFLEKMISEGFVPDCISYNTLIYGFVREENMSKAFGLV 644

Query: 656 ERLDKKLW-----IRTVHTLIRKLCSEKKVGMAALFFHKLLDKEVNVDRVSLAAFMTACC 715
           ++++++       + T ++++   C + ++  A +   K++++ VN DR       T  C
Sbjct: 645 KKMEEEQGGLVPDVFTYNSILHGFCRQNQMKEAEVVLRKMIERGVNPDR------STYTC 704

Query: 716 ESNKYALVSDLTE 724
             N +    +LTE
Sbjct: 705 MINGFVSQDNLTE 710

BLAST of Cp4.1LG09g06800 vs. NCBI nr
Match: gi|700211777|gb|KGN66873.1| (hypothetical protein Csa_1G701980 [Cucumis sativus])

HSP 1 Score: 1230.7 bits (3183), Expect = 0.0e+00
Identity = 609/731 (83.31%), Postives = 662/731 (90.56%), Query Frame = 1

Query: 1   MNATSPRQFASHGGRAPATFMPSMQFLASLRILRLHGFLHKF-SFPQRLSVSASAGLFSS 60
           MN+T+PRQ A +GGR PA F+P MQFLASLRILR HGFL K  SF Q  S SAS   FSS
Sbjct: 1   MNSTNPRQLALNGGRGPAVFIPLMQFLASLRILRPHGFLQKLCSFQQGSSASASLAFFSS 60

Query: 61  SHFDSISSPHRDSSSSSSCSSLQSPVQTICSLVIESYFRQPHLRFSPLKLNLDMDADFLT 120
           +HFDSISSPH D SSSSS   LQSP++ ICSLV+++Y RQPHLRFSP KLNLDMDA  LT
Sbjct: 61  THFDSISSPHHDFSSSSS---LQSPLKKICSLVLDTYLRQPHLRFSPSKLNLDMDAASLT 120

Query: 121 HEQAISVVASLASEEGSMMALSFFYWAIGFPKFRYFMRLYIVCTMLLVGKCKQERADEVV 180
           HEQAIS VA LASEEGSM+ALSFFYWA+GFPKFRYFMRLYIVCTM LVGKC  ERA EVV
Sbjct: 121 HEQAISAVALLASEEGSMVALSFFYWAVGFPKFRYFMRLYIVCTMSLVGKCNLERAHEVV 180

Query: 181 ECMIGVFAEIGKLKEAVDMIIDMRNQGLVLTTRVMNRIIMVAAEMGLLEYAGNMFDEMSA 240
           ECM+GVFAEIGKLKEAVDMI+DMRNQGLVLTTRVMNRII+VAAEM L+EYAGN+FDEMSA
Sbjct: 181 ECMVGVFAEIGKLKEAVDMILDMRNQGLVLTTRVMNRIILVAAEMRLVEYAGNVFDEMSA 240

Query: 241 RGMAPNSCTYKSIIVGNCRYGNVLDVDRWLNEMMERGFVVDNATLTLIINAFCKKSFVSR 300
           RG+ P+SCTYK IIVG CR GNVL+ DRW+ EMMERGFVVDNATLTLII AFC+KS V+R
Sbjct: 241 RGVYPDSCTYKYIIVGYCRNGNVLEADRWICEMMERGFVVDNATLTLIITAFCEKSLVNR 300

Query: 301 AFWLFHKVKKMGLSPNLINYSSMISGLCKRGSVKQAFELLEEMVRNGWKPNVYTHTSLID 360
           A W FHKV KMGLSPNLINYSSMISGLCKRGSVKQAFELLEEMV+NGWKPNVYTHTSLI 
Sbjct: 301 AVWFFHKVTKMGLSPNLINYSSMISGLCKRGSVKQAFELLEEMVKNGWKPNVYTHTSLIH 360

Query: 361 GLCKKGWTDRAFRLFLKLVRSDIYKPNVYTYTAMISGYCKEEKLNRAEMLFERMKEQGMV 420
           GLCKKGWT+RAFRLFLKL+RSD YKPNV+TYTAMISGYCKEEKL+RAEMLFERMKEQG+V
Sbjct: 361 GLCKKGWTERAFRLFLKLIRSDNYKPNVHTYTAMISGYCKEEKLSRAEMLFERMKEQGLV 420

Query: 421 PNTNTYTTLIDGHCKAGNFSRAYELMEVMCNEGFFPNICTYNAIVDGLCKKGRVEEAFKL 480
           PNTNTYTTLIDGHCKAGNFS+AYELME+M NEGFFPN CTYN+IVDGLCK+GR EEAFKL
Sbjct: 421 PNTNTYTTLIDGHCKAGNFSKAYELMELMSNEGFFPNTCTYNSIVDGLCKRGRAEEAFKL 480

Query: 481 LNKGCRNRVEADAVTYNILISEQCKHADLNRALMFLTKMLKVGFQPDVHLYTTLISAFCR 540
           LN G +N++EAD VTY ILISEQCK AD+N+AL+FL KM KVGFQPD+HLYTTLI+AFCR
Sbjct: 481 LNTGFQNQIEADGVTYTILISEQCKRADMNQALVFLNKMFKVGFQPDIHLYTTLIAAFCR 540

Query: 541 QKMMNDSEKLFDEVVKLGFVPTKETYTSMICGYCRERKIDLAVKFFQRMNVHGCAPDSIS 600
           Q MM DSEKLFDEV+KLG  PTKETYTSMICGYCRE+K+ LAVKFFQ+M+ HGCAPDSIS
Sbjct: 541 QNMMKDSEKLFDEVIKLGLAPTKETYTSMICGYCREKKVSLAVKFFQKMSDHGCAPDSIS 600

Query: 601 YGALISGLCKESRLDEARQLYDVMIDNGLTPCEVTRVTLAYEYCKTEEFASAMVILERLD 660
           YGALISGLCKESRLDEARQLYD MID GL+PCEVTRVTL YEYCKTE+FASAMVILERL+
Sbjct: 601 YGALISGLCKESRLDEARQLYDTMIDKGLSPCEVTRVTLTYEYCKTEDFASAMVILERLN 660

Query: 661 KKLWIRTVHTLIRKLCSEKKVGMAALFFHKLLDKEVNVDRVSLAAFMTACCESNKYALVS 720
           KKLWIRTVHTLIRKLC EKKV +AALFFHKLLDKEVNVDRV+LAAF TAC ESNKYALVS
Sbjct: 661 KKLWIRTVHTLIRKLCCEKKVALAALFFHKLLDKEVNVDRVTLAAFNTACIESNKYALVS 720

Query: 721 DLTERISRGIG 731
           DL+ERIS+GIG
Sbjct: 721 DLSERISKGIG 728

BLAST of Cp4.1LG09g06800 vs. NCBI nr
Match: gi|778664547|ref|XP_004145475.2| (PREDICTED: pentatricopeptide repeat-containing protein At4g19890 [Cucumis sativus])

HSP 1 Score: 1201.4 bits (3107), Expect = 0.0e+00
Identity = 595/708 (84.04%), Postives = 644/708 (90.96%), Query Frame = 1

Query: 24  MQFLASLRILRLHGFLHKF-SFPQRLSVSASAGLFSSSHFDSISSPHRDSSSSSSCSSLQ 83
           MQFLASLRILR HGFL K  SF Q  S SAS   FSS+HFDSISSPH D SSS   SSLQ
Sbjct: 1   MQFLASLRILRPHGFLQKLCSFQQGSSASASLAFFSSTHFDSISSPHHDFSSS---SSLQ 60

Query: 84  SPVQTICSLVIESYFRQPHLRFSPLKLNLDMDADFLTHEQAISVVASLASEEGSMMALSF 143
           SP++ ICSLV+++Y RQPHLRFSP KLNLDMDA  LTHEQAIS VA LASEEGSM+ALSF
Sbjct: 61  SPLKKICSLVLDTYLRQPHLRFSPSKLNLDMDAASLTHEQAISAVALLASEEGSMVALSF 120

Query: 144 FYWAIGFPKFRYFMRLYIVCTMLLVGKCKQERADEVVECMIGVFAEIGKLKEAVDMIIDM 203
           FYWA+GFPKFRYFMRLYIVCTM LVGKC  ERA EVVECM+GVFAEIGKLKEAVDMI+DM
Sbjct: 121 FYWAVGFPKFRYFMRLYIVCTMSLVGKCNLERAHEVVECMVGVFAEIGKLKEAVDMILDM 180

Query: 204 RNQGLVLTTRVMNRIIMVAAEMGLLEYAGNMFDEMSARGMAPNSCTYKSIIVGNCRYGNV 263
           RNQGLVLTTRVMNRII+VAAEM L+EYAGN+FDEMSARG+ P+SCTYK IIVG CR GNV
Sbjct: 181 RNQGLVLTTRVMNRIILVAAEMRLVEYAGNVFDEMSARGVYPDSCTYKYIIVGYCRNGNV 240

Query: 264 LDVDRWLNEMMERGFVVDNATLTLIINAFCKKSFVSRAFWLFHKVKKMGLSPNLINYSSM 323
           L+ DRW+ EMMERGFVVDNATLTLII AFC+KS V+RA W FHKV KMGLSPNLINYSSM
Sbjct: 241 LEADRWICEMMERGFVVDNATLTLIITAFCEKSLVNRAVWFFHKVTKMGLSPNLINYSSM 300

Query: 324 ISGLCKRGSVKQAFELLEEMVRNGWKPNVYTHTSLIDGLCKKGWTDRAFRLFLKLVRSDI 383
           ISGLCKRGSVKQAFELLEEMV+NGWKPNVYTHTSLI GLCKKGWT+RAFRLFLKL+RSD 
Sbjct: 301 ISGLCKRGSVKQAFELLEEMVKNGWKPNVYTHTSLIHGLCKKGWTERAFRLFLKLIRSDN 360

Query: 384 YKPNVYTYTAMISGYCKEEKLNRAEMLFERMKEQGMVPNTNTYTTLIDGHCKAGNFSRAY 443
           YKPNV+TYTAMISGYCKEEKL+RAEMLFERMKEQG+VPNTNTYTTLIDGHCKAGNFS+AY
Sbjct: 361 YKPNVHTYTAMISGYCKEEKLSRAEMLFERMKEQGLVPNTNTYTTLIDGHCKAGNFSKAY 420

Query: 444 ELMEVMCNEGFFPNICTYNAIVDGLCKKGRVEEAFKLLNKGCRNRVEADAVTYNILISEQ 503
           ELME+M NEGFFPN CTYN+IVDGLCK+GR EEAFKLLN G +N++EAD VTY ILISEQ
Sbjct: 421 ELMELMSNEGFFPNTCTYNSIVDGLCKRGRAEEAFKLLNTGFQNQIEADGVTYTILISEQ 480

Query: 504 CKHADLNRALMFLTKMLKVGFQPDVHLYTTLISAFCRQKMMNDSEKLFDEVVKLGFVPTK 563
           CK AD+N+AL+FL KM KVGFQPD+HLYTTLI+AFCRQ MM DSEKLFDEV+KLG  PTK
Sbjct: 481 CKRADMNQALVFLNKMFKVGFQPDIHLYTTLIAAFCRQNMMKDSEKLFDEVIKLGLAPTK 540

Query: 564 ETYTSMICGYCRERKIDLAVKFFQRMNVHGCAPDSISYGALISGLCKESRLDEARQLYDV 623
           ETYTSMICGYCRE+K+ LAVKFFQ+M+ HGCAPDSISYGALISGLCKESRLDEARQLYD 
Sbjct: 541 ETYTSMICGYCREKKVSLAVKFFQKMSDHGCAPDSISYGALISGLCKESRLDEARQLYDT 600

Query: 624 MIDNGLTPCEVTRVTLAYEYCKTEEFASAMVILERLDKKLWIRTVHTLIRKLCSEKKVGM 683
           MID GL+PCEVTRVTL YEYCKTE+FASAMVILERL+KKLWIRTVHTLIRKLC EKKV +
Sbjct: 601 MIDKGLSPCEVTRVTLTYEYCKTEDFASAMVILERLNKKLWIRTVHTLIRKLCCEKKVAL 660

Query: 684 AALFFHKLLDKEVNVDRVSLAAFMTACCESNKYALVSDLTERISRGIG 731
           AALFFHKLLDKEVNVDRV+LAAF TAC ESNKYALVSDL+ERIS+GIG
Sbjct: 661 AALFFHKLLDKEVNVDRVTLAAFNTACIESNKYALVSDLSERISKGIG 705

BLAST of Cp4.1LG09g06800 vs. NCBI nr
Match: gi|659118286|ref|XP_008459042.1| (PREDICTED: pentatricopeptide repeat-containing protein At4g19890 [Cucumis melo])

HSP 1 Score: 1198.7 bits (3100), Expect = 0.0e+00
Identity = 596/708 (84.18%), Postives = 644/708 (90.96%), Query Frame = 1

Query: 24  MQFLASLRILRLHGFLHKF-SFPQRLSVSASAGLFSSSHFDSISSPHRDSSSSSSCSSLQ 83
           MQFLAS RILR HGFL K  S     SVSAS   FSS+HFDSISSPH D SSSS    LQ
Sbjct: 1   MQFLASHRILRTHGFLQKLCSLQHGSSVSASIAFFSSTHFDSISSPHHDFSSSS----LQ 60

Query: 84  SPVQTICSLVIESYFRQPHLRFSPLKLNLDMDADFLTHEQAISVVASLASEEGSMMALSF 143
           SPVQ  CSLV+E+Y RQPHLRFSP KLNLDMDAD LTHEQAIS VASLASEEGSM+ALSF
Sbjct: 61  SPVQKTCSLVLEAYLRQPHLRFSPSKLNLDMDADSLTHEQAISAVASLASEEGSMVALSF 120

Query: 144 FYWAIGFPKFRYFMRLYIVCTMLLVGKCKQERADEVVECMIGVFAEIGKLKEAVDMIIDM 203
           FYWAIGFPKFRYFMRLYIVCTM L+GKC  ERA EVVECM+GVFAEIGKLKEAVDMI+DM
Sbjct: 121 FYWAIGFPKFRYFMRLYIVCTMSLIGKCNLERAHEVVECMVGVFAEIGKLKEAVDMILDM 180

Query: 204 RNQGLVLTTRVMNRIIMVAAEMGLLEYAGNMFDEMSARGMAPNSCTYKSIIVGNCRYGNV 263
           RNQGLVLTTRVMNRII+VAA MGL+EYAGN+FDEMSARG+ P+SCTYKSIIVG CR G+V
Sbjct: 181 RNQGLVLTTRVMNRIILVAAGMGLVEYAGNVFDEMSARGVYPDSCTYKSIIVGYCRNGDV 240

Query: 264 LDVDRWLNEMMERGFVVDNATLTLIINAFCKKSFVSRAFWLFHKVKKMGLSPNLINYSSM 323
           L+ DRW+ EMMERGFVVDNATLTLII AFC+KS V+RA W FHKV KMGLSPNLINYSSM
Sbjct: 241 LEADRWICEMMERGFVVDNATLTLIIKAFCEKSLVNRAVWFFHKVTKMGLSPNLINYSSM 300

Query: 324 ISGLCKRGSVKQAFELLEEMVRNGWKPNVYTHTSLIDGLCKKGWTDRAFRLFLKLVRSDI 383
           ISGLCKRGSVKQAFELLEEMV+NGWKPNVYTHTSLI GLCKKGWT+RAFRLFLKLVRSD 
Sbjct: 301 ISGLCKRGSVKQAFELLEEMVKNGWKPNVYTHTSLIHGLCKKGWTERAFRLFLKLVRSDN 360

Query: 384 YKPNVYTYTAMISGYCKEEKLNRAEMLFERMKEQGMVPNTNTYTTLIDGHCKAGNFSRAY 443
           YKPNV+TYTAMISGYCKE+KL+RAEMLFERMKEQG+VPNTNTYTTLIDGHCKAGNFS+AY
Sbjct: 361 YKPNVHTYTAMISGYCKEDKLSRAEMLFERMKEQGLVPNTNTYTTLIDGHCKAGNFSKAY 420

Query: 444 ELMEVMCNEGFFPNICTYNAIVDGLCKKGRVEEAFKLLNKGCRNRVEADAVTYNILISEQ 503
           ELME+M NEGFFPNICTYNAIVDGLCK+GR EEAF+LL+KG +N++EAD VTY ILISEQ
Sbjct: 421 ELMELMSNEGFFPNICTYNAIVDGLCKRGRAEEAFELLSKGFQNQIEADGVTYTILISEQ 480

Query: 504 CKHADLNRALMFLTKMLKVGFQPDVHLYTTLISAFCRQKMMNDSEKLFDEVVKLGFVPTK 563
           CK AD+N AL+FL KM KVGFQPD+HLYTTLI+AFCRQ+MM DSEKLFDEVVKLG  PTK
Sbjct: 481 CKRADMNHALVFLNKMFKVGFQPDIHLYTTLIAAFCRQRMMKDSEKLFDEVVKLGLAPTK 540

Query: 564 ETYTSMICGYCRERKIDLAVKFFQRMNVHGCAPDSISYGALISGLCKESRLDEARQLYDV 623
           ETYTSMICGYCRE+ I LAVKFFQ+M+  GCAPDSISYGALISGLCKESRLDEARQLYD 
Sbjct: 541 ETYTSMICGYCREKNISLAVKFFQKMSDQGCAPDSISYGALISGLCKESRLDEARQLYDT 600

Query: 624 MIDNGLTPCEVTRVTLAYEYCKTEEFASAMVILERLDKKLWIRTVHTLIRKLCSEKKVGM 683
           MID GL+PCEVTRV+LAYEYCKTE+ ASAMVILERL+KKLWIRTVHTLIRKLC EKKV +
Sbjct: 601 MIDKGLSPCEVTRVSLAYEYCKTEDCASAMVILERLNKKLWIRTVHTLIRKLCCEKKVAL 660

Query: 684 AALFFHKLLDKEVNVDRVSLAAFMTACCESNKYALVSDLTERISRGIG 731
           AALFFHKLLDKEVNVDRV+LAAF+TAC ESNKYALVSDL+ERIS+GIG
Sbjct: 661 AALFFHKLLDKEVNVDRVTLAAFITACTESNKYALVSDLSERISKGIG 704

BLAST of Cp4.1LG09g06800 vs. NCBI nr
Match: gi|645238747|ref|XP_008225821.1| (PREDICTED: pentatricopeptide repeat-containing protein At4g19890 [Prunus mume])

HSP 1 Score: 978.8 bits (2529), Expect = 5.2e-282
Identity = 483/713 (67.74%), Postives = 578/713 (81.07%), Query Frame = 1

Query: 27  LASLRILRL-HGFLHKFSFPQRLSVSASAGLFSS------SHFDSISSPHR--DSSSSSS 86
           + SLRILR  H    K   P    +S    LFS       +H+D   S      ++SSSS
Sbjct: 1   MVSLRILRRSHELQRKLLSPTSNPISLFYTLFSLRTVSSYTHYDDPYSTTTITTTTSSSS 60

Query: 87  CSSLQSPVQTICSLVIESYFRQPHLRFSPLKLNLDMDADFLTHEQAISVVASLASEEGSM 146
            S  QS V+TIC+LV +SY  Q H R SP KLNLD++ D LTHEQAISVVASLA E GSM
Sbjct: 61  SSQSQSLVRTICALVCQSYSPQTHPRSSPPKLNLDLNVDSLTHEQAISVVASLAEEAGSM 120

Query: 147 MALSFFYWAIGFPKFRYFMRLYIVCTMLLVGKCKQERADEVVECMIGVFAEIGKLKEAVD 206
           +ALSFFYWAIGFPKFRYFMRLYI C M L G    ERA EVV CM+  FAEI +LKEA D
Sbjct: 121 VALSFFYWAIGFPKFRYFMRLYIFCAMSLFGNGNLERAHEVVHCMVRNFAEIERLKEAAD 180

Query: 207 MIIDMRNQGLVLTTRVMNRIIMVAAEMGLLEYAGNMFDEMSARGMAPNSCTYKSIIVGNC 266
           M+ +M+NQGL+L+TR +N ++ +A ++GL+EYA N+F+EM  RG++P+S +YKS++VG C
Sbjct: 181 MVFEMQNQGLMLSTRTLNCVLGIACDLGLVEYAENLFEEMCVRGVSPDSLSYKSMVVGYC 240

Query: 267 RYGNVLDVDRWLNEMMERGFVVDNATLTLIINAFCKKSFVSRAFWLFHKVKKMGLSPNLI 326
           R   VL+VDRWL++M+ERGFV+DNAT TLI + FC+KS VSRA W F K+ +MG+ PNLI
Sbjct: 241 RSSRVLEVDRWLSKMLERGFVLDNATFTLITSLFCEKSLVSRASWCFDKMIRMGVKPNLI 300

Query: 327 NYSSMISGLCKRGSVKQAFELLEEMVRNGWKPNVYTHTSLIDGLCKKGWTDRAFRLFLKL 386
           N++S+I GLC+RGS+KQAFE+LEEMVR GWKPNVYTHT+LIDGLCKKGWT+RAFRLFLKL
Sbjct: 301 NFTSLIHGLCQRGSIKQAFEMLEEMVRKGWKPNVYTHTALIDGLCKKGWTERAFRLFLKL 360

Query: 387 VRSDIYKPNVYTYTAMISGYCKEEKLNRAEMLFERMKEQGMVPNTNTYTTLIDGHCKAGN 446
           VRSD YKPNV+TYTAMI GYC+E+K++RAEML  RMKEQG+VPNTNTYTTL+ GHCKAGN
Sbjct: 361 VRSDNYKPNVHTYTAMIRGYCEEDKMSRAEMLLSRMKEQGLVPNTNTYTTLVSGHCKAGN 420

Query: 447 FSRAYELMEVMCNEGFFPNICTYNAIVDGLCKKGRVEEAFKLLNKGCRNRVEADAVTYNI 506
           F RAYELM++M  EGF PNICTYNA+ D LCKKGRV+EA+KL+ KG R  +EAD VTY I
Sbjct: 421 FDRAYELMDIMGKEGFTPNICTYNAVFDSLCKKGRVQEAYKLIKKGFRRGLEADRVTYTI 480

Query: 507 LISEQCKHADLNRALMFLTKMLKVGFQPDVHLYTTLISAFCRQKMMNDSEKLFDEVVKLG 566
            ISE CK  D+N AL+F  KMLKVG QPD+H YTTLI+AFCRQK M +SEK F+  ++LG
Sbjct: 481 FISEHCKRGDINGALVFFNKMLKVGLQPDMHSYTTLIAAFCRQKKMKESEKFFELSLRLG 540

Query: 567 FVPTKETYTSMICGYCRERKIDLAVKFFQRMNVHGCAPDSISYGALISGLCKESRLDEAR 626
            +PTKETYTSMICGYCR+  I LAVKFF RM  HGCAPDS +YGALISGLCKE +LDEAR
Sbjct: 541 LIPTKETYTSMICGYCRDENIALAVKFFHRMGDHGCAPDSFTYGALISGLCKEEKLDEAR 600

Query: 627 QLYDVMIDNGLTPCEVTRVTLAYEYCKTEEFASAMVILERLDKKLWIRTVHTLIRKLCSE 686
           +LYD M+D GL+PCEVTR+TLAY+YCK ++ A+AMV+LERL+KKLWIRTV+TL+RKLCSE
Sbjct: 601 RLYDTMMDKGLSPCEVTRLTLAYKYCKKDDSAAAMVLLERLEKKLWIRTVNTLVRKLCSE 660

Query: 687 KKVGMAALFFHKLLDKEVNVDRVSLAAFMTACCESNKYALVSDLTERISRGIG 731
           KKVG+ ALFFHKL+DK+ NVDRV+LAAF TAC ESNKYALVSDLTERIS+GIG
Sbjct: 661 KKVGIGALFFHKLVDKDQNVDRVTLAAFKTACYESNKYALVSDLTERISKGIG 713

BLAST of Cp4.1LG09g06800 vs. NCBI nr
Match: gi|764554220|ref|XP_004293756.2| (PREDICTED: pentatricopeptide repeat-containing protein At4g19890 [Fragaria vesca subsp. vesca])

HSP 1 Score: 960.3 bits (2481), Expect = 1.9e-276
Identity = 467/710 (65.77%), Postives = 567/710 (79.86%), Query Frame = 1

Query: 22  PSMQFLASLRILRLHGFLHKFSFPQRLSVSASAGLFS-SSHFDSISSPHRDSSSSSSCSS 81
           P    + SLRILR HG  HK   P    +S    L + SS+ DS       S++S S S 
Sbjct: 37  PPKTLMLSLRILRNHGLHHKLLSPTSTHISHPYTLRTLSSYTDSDEPSSSASTTSDSQSE 96

Query: 82  LQSPVQTICSLVIESYFRQPHLRFSPLKLNLDMDADFLTHEQAISVVASLASEEGSMMAL 141
             S V  ICS+V +SY  Q H + SP  LNLD++ D LTHE AISVVASLA E GSM+AL
Sbjct: 97  SHSLVTQICSMVYKSYSPQTHFKSSPPILNLDLNPDSLTHEHAISVVASLAGEAGSMVAL 156

Query: 142 SFFYWAIGFPKFRYFMRLYIVCTMLLVGKCKQERADEVVECMIGVFAEIGKLKEAVDMII 201
           SFFYWA+GF KFRYFMRLYI C M + G    ER  EVV+CM+  FAEIG+ KEA DM+ 
Sbjct: 157 SFFYWAVGFTKFRYFMRLYIFCAMSIFGNGNLERTHEVVQCMVRSFAEIGRFKEAADMVF 216

Query: 202 DMRNQGLVLTTRVMNRIIMVAAEMGLLEYAGNMFDEMSARGMAPNSCTYKSIIVGNCRYG 261
           DM+NQGLVL+TR +N ++ +A EMGL+EYA N+FDEMS RG+ P+  ++K ++VG CR G
Sbjct: 217 DMQNQGLVLSTRTLNCVVGIACEMGLMEYAENVFDEMSVRGVCPDGLSFKCMVVGYCRKG 276

Query: 262 NVLDVDRWLNEMMERGFVVDNATLTLIINAFCKKSFVSRAFWLFHKVKKMGLSPNLINYS 321
            V++VDRWL+ M+ERGFV+DNA+ TLI++ FC+K FVSRA W F K+ KMG+ PNL+N++
Sbjct: 277 AVMEVDRWLSRMIERGFVLDNASFTLIVSVFCEKGFVSRASWCFDKMSKMGVKPNLVNFT 336

Query: 322 SMISGLCKRGSVKQAFELLEEMVRNGWKPNVYTHTSLIDGLCKKGWTDRAFRLFLKLVRS 381
           S+I GLCKRGSVKQAFE+LEEMVR GWKPNVYTHT+LIDGLCKKGWT+RAFRLFLKLVRS
Sbjct: 337 SLIHGLCKRGSVKQAFEMLEEMVRRGWKPNVYTHTALIDGLCKKGWTERAFRLFLKLVRS 396

Query: 382 DIYKPNVYTYTAMISGYCKEEKLNRAEMLFERMKEQGMVPNTNTYTTLIDGHCKAGNFSR 441
           D YKPNV+TYTAMISGYCKEEK++RAEML  RMKEQ +VPN  TYTTL+ GHCKAGNF +
Sbjct: 397 DNYKPNVHTYTAMISGYCKEEKMSRAEMLLSRMKEQELVPNAYTYTTLVYGHCKAGNFEK 456

Query: 442 AYELMEVMCNEGFFPNICTYNAIVDGLCKKGRVEEAFKLLNKGCRNRVEADAVTYNILIS 501
           AY+LM+VM  EGF PNICTYNA++D LCKK RV+EA+KL+ KG R  ++AD VTY I IS
Sbjct: 457 AYQLMDVMSEEGFAPNICTYNAVMDCLCKKERVQEAYKLIKKGFRRGLQADRVTYTIFIS 516

Query: 502 EQCKHADLNRALMFLTKMLKVGFQPDVHLYTTLISAFCRQKMMNDSEKLFDEVVKLGFVP 561
           E CK AD+  A  F  KM+K G +PD+H YTTLI+AFCRQK M +SEKLF+  V+LG +P
Sbjct: 517 EHCKQADIKGAQAFFNKMVKAGLEPDMHSYTTLIAAFCRQKKMKESEKLFEVAVRLGLIP 576

Query: 562 TKETYTSMICGYCRERKIDLAVKFFQRMNVHGCAPDSISYGALISGLCKESRLDEARQLY 621
           TKETYTSMICGYCR+  I LAVKFF RM+ HGC+PDS +YGALISGLCKE +LDEAR+LY
Sbjct: 577 TKETYTSMICGYCRDGNIVLAVKFFHRMSDHGCSPDSFTYGALISGLCKEEKLDEARKLY 636

Query: 622 DVMIDNGLTPCEVTRVTLAYEYCKTEEFASAMVILERLDKKLWIRTVHTLIRKLCSEKKV 681
           D M+D GL+PCEVTR+TL ++YC+ +++A+AMVIL+RL+KK WIRTV+TL+RKLC EKKV
Sbjct: 637 DTMMDKGLSPCEVTRLTLTHKYCQKDDYATAMVILDRLEKKYWIRTVNTLVRKLCCEKKV 696

Query: 682 GMAALFFHKLLDKEVNVDRVSLAAFMTACCESNKYALVSDLTERISRGIG 731
           G+AALFFHKL+DK+ NVDRV+L AF TAC ESNKYAL+SDLTERIS+GIG
Sbjct: 697 GIAALFFHKLVDKDQNVDRVTLQAFTTACYESNKYALLSDLTERISKGIG 746

The following BLAST results are available for this feature:
Match NameE-valueIdentityDescription
PP326_ARATH5.1e-25362.34Pentatricopeptide repeat-containing protein At4g19890 OS=Arabidopsis thaliana GN... [more]
PP407_ARATH3.3e-7434.11Pentatricopeptide repeat-containing protein At5g39710 OS=Arabidopsis thaliana GN... [more]
PP306_ARATH7.0e-6932.15Pentatricopeptide repeat-containing protein At4g11690 OS=Arabidopsis thaliana GN... [more]
PPR12_ARATH2.7e-6830.15Pentatricopeptide repeat-containing protein At1g05670, mitochondrial OS=Arabidop... [more]
PP360_ARATH5.0e-6726.40Pentatricopeptide repeat-containing protein At5g01110 OS=Arabidopsis thaliana GN... [more]
Match NameE-valueIdentityDescription
A0A0A0LYL9_CUCSA0.0e+0083.31Uncharacterized protein OS=Cucumis sativus GN=Csa_1G701980 PE=4 SV=1[more]
M5WK57_PRUPE4.3e-26765.90Uncharacterized protein (Fragment) OS=Prunus persica GN=PRUPE_ppa015022mg PE=4 S... [more]
W9RA33_9ROSA7.4e-26765.18Uncharacterized protein OS=Morus notabilis GN=L484_008796 PE=4 SV=1[more]
F6HFS1_VITVI2.8e-26664.60Putative uncharacterized protein OS=Vitis vinifera GN=VIT_01s0011g01910 PE=4 SV=... [more]
A5BPH2_VITVI2.4e-26564.32Putative uncharacterized protein OS=Vitis vinifera GN=VITISV_008458 PE=4 SV=1[more]
Match NameE-valueIdentityDescription
AT4G19890.12.9e-25462.34 Pentatricopeptide repeat (PPR-like) superfamily protein[more]
AT5G39710.11.8e-7534.11 Tetratricopeptide repeat (TPR)-like superfamily protein[more]
AT4G11690.14.0e-7032.15 Pentatricopeptide repeat (PPR-like) superfamily protein[more]
AT1G05670.11.5e-6930.15 Pentatricopeptide repeat (PPR-like) superfamily protein[more]
AT5G01110.12.8e-6826.40 Tetratricopeptide repeat (TPR)-like superfamily protein[more]
Match NameE-valueIdentityDescription
gi|700211777|gb|KGN66873.1|0.0e+0083.31hypothetical protein Csa_1G701980 [Cucumis sativus][more]
gi|778664547|ref|XP_004145475.2|0.0e+0084.04PREDICTED: pentatricopeptide repeat-containing protein At4g19890 [Cucumis sativu... [more]
gi|659118286|ref|XP_008459042.1|0.0e+0084.18PREDICTED: pentatricopeptide repeat-containing protein At4g19890 [Cucumis melo][more]
gi|645238747|ref|XP_008225821.1|5.2e-28267.74PREDICTED: pentatricopeptide repeat-containing protein At4g19890 [Prunus mume][more]
gi|764554220|ref|XP_004293756.2|1.9e-27665.77PREDICTED: pentatricopeptide repeat-containing protein At4g19890 [Fragaria vesca... [more]
The following terms have been associated with this gene:
Vocabulary: Molecular Function
TermDefinition
GO:0005515protein binding
Vocabulary: INTERPRO
TermDefinition
IPR011990TPR-like_helical_dom_sf
IPR002885Pentatricopeptide_repeat
GO Assignments
This gene is annotated with the following GO terms.
Category Term Accession Term Name
biological_process GO:0008150 biological_process
cellular_component GO:0005575 cellular_component
molecular_function GO:0005515 protein binding
molecular_function GO:0003674 molecular_function

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
Cp4.1LG09g06800.1Cp4.1LG09g06800.1mRNA


Analysis Name: InterPro Annotations of Cucurbita pepo
Date Performed: 2017-12-02
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR002885Pentatricopeptide repeatPFAMPF01535PPRcoord: 181..207
score:
IPR002885Pentatricopeptide repeatPFAMPF12854PPR_1coord: 522..552
score: 3.
IPR002885Pentatricopeptide repeatPFAMPF13041PPR_2coord: 564..609
score: 4.0E-14coord: 314..363
score: 3.1E-18coord: 244..293
score: 7.5E-8coord: 455..504
score: 2.5E-15coord: 385..434
score: 5.2
IPR002885Pentatricopeptide repeatTIGRFAMsTIGR00756TIGR00756coord: 564..597
score: 1.3E-9coord: 247..280
score: 3.3E-4coord: 388..422
score: 5.5E-11coord: 424..457
score: 4.1E-9coord: 529..561
score: 2.1E-7coord: 352..386
score: 6.0E-6coord: 493..527
score: 6.3E-5coord: 458..482
score: 1.7E-6coord: 598..630
score: 7.5E-8coord: 319..351
score: 5.2
IPR002885Pentatricopeptide repeatPROFILEPS51375PPRcoord: 315..349
score: 13.34coord: 698..728
score: 5.218coord: 456..490
score: 10.775coord: 350..384
score: 10.216coord: 280..314
score: 10.293coord: 596..630
score: 13.23coord: 386..420
score: 13.987coord: 175..209
score: 7.202coord: 663..697
score: 5.744coord: 421..455
score: 12.321coord: 491..525
score: 11.071coord: 526..560
score: 12.101coord: 245..279
score: 9.153coord: 561..595
score: 12.31coord: 210..244
score: 8
IPR011990Tetratricopeptide-like helical domainGENE3DG3DSA:1.25.40.10coord: 328..589
score: 3.
NoneNo IPR availablePANTHERPTHR24015FAMILY NOT NAMEDcoord: 61..155
score: 4.1E-273coord: 180..672
score: 4.1E
NoneNo IPR availablePANTHERPTHR24015:SF325SUBFAMILY NOT NAMEDcoord: 61..155
score: 4.1E-273coord: 180..672
score: 4.1E
NoneNo IPR availableunknownSSF81901HCP-likecoord: 362..588
score: 8.63